HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 13-JAN-03 1NNH TITLE HYPOTHETICAL PROTEIN FROM PYROCOCCUS FURIOSUS PFU-1801964 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ASPARAGINYL-TRNA SYNTHETASE-RELATED PEPTIDE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS FURIOSUS; SOURCE 3 ORGANISM_TAXID: 2261; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PYROCOCCUS FURIOSUS, ASPARAGINYL-TRNA SYNTHETASE, STRUCTURAL KEYWDS 2 GENOMICS, PSI, PROTEIN STRUCTURE INITIATIVE, SOUTHEAST COLLABORATORY KEYWDS 3 FOR STRUCTURAL GENOMICS, SECSG, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR W.TEMPEL,Z.-J.LIU,F.D.SCHUBOT,A.SHAH,W.B.ARENDALL III,J.P.ROSE, AUTHOR 2 D.C.RICHARDSON,J.S.RICHARDSON,B.-C.WANG,SOUTHEAST COLLABORATORY FOR AUTHOR 3 STRUCTURAL GENOMICS (SECSG) REVDAT 6 14-FEB-24 1NNH 1 REMARK LINK REVDAT 5 11-OCT-17 1NNH 1 REMARK REVDAT 4 13-JUL-11 1NNH 1 VERSN REVDAT 3 24-FEB-09 1NNH 1 VERSN REVDAT 2 01-FEB-05 1NNH 1 AUTHOR KEYWDS REMARK REVDAT 1 03-FEB-04 1NNH 0 JRNL AUTH SOUTHEAST COLLABORATORY FOR STRUCTURAL GENOMICS JRNL TITL HYPOTHETICAL PROTEIN FROM PYROCOCCUS FURIOSUS PFU-1801964 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 62.02 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 41501 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.191 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2086 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.69 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2900 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1780 REMARK 3 BIN FREE R VALUE SET COUNT : 175 REMARK 3 BIN FREE R VALUE : 0.2110 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2340 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 148 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.15 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.16000 REMARK 3 B22 (A**2) : -0.16000 REMARK 3 B33 (A**2) : 0.33000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.084 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.081 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2414 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2246 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3266 ; 1.390 ; 1.962 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5203 ; 3.657 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 292 ; 5.992 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 349 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2659 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 513 ; 0.007 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 620 ; 0.190 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2302 ; 0.272 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 1577 ; 0.136 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; 0.107 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 23 ; 0.255 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 51 ; 0.272 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.070 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1463 ; 0.641 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2365 ; 1.171 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 951 ; 1.942 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 901 ; 3.220 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1NNH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 6 REMARK 6 THE PROTEIN WAS CLONED, EXPRESSED AND PURIFIED BY THE SECSG REMARK 6 PYROCOCCUS PROTEIN PRODUCTION GROUP (M.W.W.ADAMS, REMARK 6 P.S.BRERETON, M.IZUMI, F.E.JENNEY JR., H.-S.LEE, F.L.POOLE REMARK 6 II, C.SHAH, F.SUGAR) UNDER THE DIRECTION OF M.W.W.ADAMS. REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-JAN-03. REMARK 100 THE DEPOSITION ID IS D_1000018033. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-OCT-02 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 9.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.04 REMARK 200 MONOCHROMATOR : SI 220 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MAR REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41526 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.03900 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 46.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.71 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.24300 REMARK 200 <I/SIGMA(I)> FOR SHELL : 7.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 550 MME, SODIUM CHLORIDE, BICINE, REMARK 280 PH 9, MODIFIED MICROBATCH, TEMPERATURE 291K, PH 9.00 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y,Z REMARK 290 7555 -Y+1/2,X,Z+3/4 REMARK 290 8555 Y,-X+1/2,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.26450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 34.26450 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.34200 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 34.26450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 37.67100 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 34.26450 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 113.01300 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 34.26450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 34.26450 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 75.34200 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 34.26450 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 113.01300 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 34.26450 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 37.67100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 1 CHAIN. THE BIOLOGICAL UNIT IS UNKNOWN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 5790 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -70.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 68.52900 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 2 CB CG OD1 ND2 REMARK 470 GLU A 5 CG CD OE1 OE2 REMARK 470 GLU A 10 CB CG CD OE1 OE2 REMARK 470 ARG A 103 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 165 CG CD OE1 OE2 REMARK 470 GLU A 168 CG CD OE1 OE2 REMARK 470 LYS A 175 CG CD CE NZ REMARK 470 GLU A 179 CD OE1 OE2 REMARK 470 GLU A 181 CD OE1 OE2 REMARK 470 LYS A 235 CD CE NZ REMARK 470 ASN A 239 CG OD1 ND2 REMARK 470 ASP A 241 CG OD1 OD2 REMARK 470 ARG A 244 CD NE CZ NH1 NH2 REMARK 470 GLU A 248 CD OE1 OE2 REMARK 470 LYS A 251 NZ REMARK 470 LYS A 276 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 52 119.14 -170.77 REMARK 500 LYS A 89 -57.77 73.91 REMARK 500 ASN A 188 62.71 65.29 REMARK 500 ARG A 191 -129.10 -154.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A2001 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A2012 O REMARK 620 2 HOH A2026 O 91.2 REMARK 620 3 HOH A2029 O 88.2 93.1 REMARK 620 4 HOH A2031 O 176.3 86.8 88.8 REMARK 620 5 HOH A2037 O 90.7 174.5 92.1 91.5 REMARK 620 6 HOH A2039 O 89.7 91.0 175.4 93.5 83.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 2001 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: PFU-1801964-001 RELATED DB: TARGETDB DBREF 1NNH A 1 294 UNP Q8TZN6 Q8TZN6_PYRFU 1 294 SEQRES 1 A 294 MET ASN ALA VAL GLU ILE ILE SER ARG GLU ILE SER PRO SEQRES 2 A 294 THR LEU ASP ILE GLN THR LYS ILE LEU GLU TYR MET THR SEQRES 3 A 294 ASP PHE PHE VAL LYS GLU GLY PHE LYS TRP LEU LEU PRO SEQRES 4 A 294 VAL ILE ILE SER PRO ILE THR ASP PRO LEU TRP PRO ASP SEQRES 5 A 294 PRO ALA GLY GLU GLY MET GLU PRO ALA GLU VAL GLU ILE SEQRES 6 A 294 TYR GLY VAL LYS MET ARG LEU THR HIS SER MET ILE LEU SEQRES 7 A 294 HIS LYS GLN LEU ALA ILE ALA MET GLY LEU LYS LYS ILE SEQRES 8 A 294 PHE VAL LEU SER PRO ASN ILE ARG LEU GLU SER ARG GLN SEQRES 9 A 294 LYS ASP ASP GLY ARG HIS ALA TYR GLU PHE THR GLN LEU SEQRES 10 A 294 ASP PHE GLU VAL GLU ARG ALA LYS MET GLU ASP ILE MET SEQRES 11 A 294 ARG LEU ILE GLU ARG LEU VAL TYR GLY LEU PHE ARG LYS SEQRES 12 A 294 ALA GLU GLU TRP THR GLY ARG GLU PHE PRO LYS THR LYS SEQRES 13 A 294 ARG PHE GLU VAL PHE GLU TYR SER GLU VAL LEU GLU GLU SEQRES 14 A 294 PHE GLY SER ASP GLU LYS ALA SER GLN GLU MET GLU GLU SEQRES 15 A 294 PRO PHE TRP ILE ILE ASN ILE PRO ARG GLU PHE TYR ASP SEQRES 16 A 294 ARG GLU VAL ASP GLY PHE TRP ARG ASN TYR ASP LEU ILE SEQRES 17 A 294 LEU PRO TYR GLY TYR GLY GLU VAL ALA SER GLY GLY GLU SEQRES 18 A 294 ARG GLU TRP GLU TYR GLU LYS ILE VAL ALA LYS ILE ARG SEQRES 19 A 294 LYS ALA GLY LEU ASN GLU ASP SER PHE ARG PRO TYR LEU SEQRES 20 A 294 GLU ILE ALA LYS ALA GLY LYS LEU LYS PRO SER ALA GLY SEQRES 21 A 294 ALA GLY ILE GLY VAL GLU ARG LEU VAL ARG PHE ILE VAL SEQRES 22 A 294 GLY ALA LYS HIS ILE ALA GLU VAL GLN PRO PHE PRO ARG SEQRES 23 A 294 ILE PRO GLY ILE PRO ALA VAL ILE HET NA A2001 1 HETNAM NA SODIUM ION FORMUL 2 NA NA 1+ FORMUL 3 HOH *148(H2 O) HELIX 1 1 ASN A 2 SER A 8 1 7 HELIX 2 2 ILE A 11 GLU A 32 1 22 HELIX 3 3 MET A 76 MET A 86 1 11 HELIX 4 4 SER A 102 ASP A 106 5 5 HELIX 5 5 LYS A 125 GLY A 149 1 25 HELIX 6 6 TYR A 163 PHE A 170 1 8 HELIX 7 7 SER A 172 MET A 180 1 9 HELIX 8 8 GLU A 225 ALA A 236 1 12 HELIX 9 9 ASN A 239 SER A 242 5 4 HELIX 10 10 PHE A 243 ALA A 252 1 10 HELIX 11 11 VAL A 265 GLY A 274 1 10 HELIX 12 12 HIS A 277 GLN A 282 5 6 SHEET 1 A 8 LYS A 35 TRP A 36 0 SHEET 2 A 8 LYS A 90 ILE A 98 1 O LYS A 90 N LYS A 35 SHEET 3 A 8 GLU A 113 GLU A 122 -1 O GLN A 116 N SER A 95 SHEET 4 A 8 SER A 258 GLY A 264 -1 O ALA A 261 N PHE A 119 SHEET 5 A 8 GLY A 214 GLU A 221 -1 N SER A 218 O GLY A 262 SHEET 6 A 8 ASN A 204 LEU A 209 -1 N LEU A 207 O VAL A 216 SHEET 7 A 8 PHE A 184 ILE A 187 -1 N PHE A 184 O ILE A 208 SHEET 8 A 8 GLU A 159 GLU A 162 1 N GLU A 159 O TRP A 185 SHEET 1 B 3 ILE A 42 SER A 43 0 SHEET 2 B 3 VAL A 68 LEU A 72 -1 O ARG A 71 N SER A 43 SHEET 3 B 3 GLU A 62 ILE A 65 -1 N ILE A 65 O VAL A 68 SHEET 1 C 2 GLU A 197 VAL A 198 0 SHEET 2 C 2 PHE A 201 TRP A 202 -1 O PHE A 201 N VAL A 198 LINK NA NA A2001 O HOH A2012 1555 1555 2.15 LINK NA NA A2001 O HOH A2026 1555 6665 2.08 LINK NA NA A2001 O HOH A2029 1555 6665 2.19 LINK NA NA A2001 O HOH A2031 1555 6665 2.13 LINK NA NA A2001 O HOH A2037 1555 1555 2.08 LINK NA NA A2001 O HOH A2039 1555 1555 2.16 CISPEP 1 TRP A 50 PRO A 51 0 -10.04 SITE 1 AC1 6 HOH A2012 HOH A2026 HOH A2029 HOH A2031 SITE 2 AC1 6 HOH A2037 HOH A2039 CRYST1 68.529 68.529 150.684 90.00 90.00 90.00 I 41 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014592 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014592 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006636 0.00000