data_1NTV # _entry.id 1NTV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.289 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1NTV RCSB RCSB018198 WWPDB D_1000018198 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1NU2 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1NTV _pdbx_database_status.recvd_initial_deposition_date 2003-01-30 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Stolt, P.C.' 1 'Jeon, H.' 2 'Song, H.K.' 3 'Herz, J.' 4 'Eck, M.J.' 5 'Blacklow, S.C.' 6 # _citation.id primary _citation.title 'Origins of Peptide Selectivity and Phosphoinositide Binding Revealed by Structures of Disabled-1 PTB Domain Complexes' _citation.journal_abbrev Structure _citation.journal_volume 11 _citation.page_first 569 _citation.page_last 579 _citation.year 2003 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12737822 _citation.pdbx_database_id_DOI '10.1016/S0969-2126(03)00068-6' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Stolt, P.C.' 1 primary 'Jeon, H.' 2 primary 'Song, H.K.' 3 primary 'Herz, J.' 4 primary 'Eck, M.J.' 5 primary 'Blacklow, S.C.' 6 # _cell.entry_id 1NTV _cell.length_a 36.247 _cell.length_b 45.724 _cell.length_c 90.124 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1NTV _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Disabled homolog 1' 17084.768 1 ? ? 'Residues 23-174' ? 2 polymer syn 'Apolipoprotein E Receptor-2 peptide' 1255.379 1 ? ? ? ? 3 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 4 water nat water 18.015 139 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GQDRSEATLIKRFKGEGVRYKAKLIGIDEVSAARGDKLCQDSMMKLKGVVAGARSKGEHKQKIFLTISFGGIKIFDEKTG ALQHHHAVHEISYIAKDITDHRAFGYVCGKEGNHRFVAIKTAQAAEPVILDLRDLFQLIYELKQREELEKKA ; ;GQDRSEATLIKRFKGEGVRYKAKLIGIDEVSAARGDKLCQDSMMKLKGVVAGARSKGEHKQKIFLTISFGGIKIFDEKTG ALQHHHAVHEISYIAKDITDHRAFGYVCGKEGNHRFVAIKTAQAAEPVILDLRDLFQLIYELKQREELEKKA ; A ? 2 'polypeptide(L)' no no NFDNPVYRKT NFDNPVYRKT B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 GLN n 1 3 ASP n 1 4 ARG n 1 5 SER n 1 6 GLU n 1 7 ALA n 1 8 THR n 1 9 LEU n 1 10 ILE n 1 11 LYS n 1 12 ARG n 1 13 PHE n 1 14 LYS n 1 15 GLY n 1 16 GLU n 1 17 GLY n 1 18 VAL n 1 19 ARG n 1 20 TYR n 1 21 LYS n 1 22 ALA n 1 23 LYS n 1 24 LEU n 1 25 ILE n 1 26 GLY n 1 27 ILE n 1 28 ASP n 1 29 GLU n 1 30 VAL n 1 31 SER n 1 32 ALA n 1 33 ALA n 1 34 ARG n 1 35 GLY n 1 36 ASP n 1 37 LYS n 1 38 LEU n 1 39 CYS n 1 40 GLN n 1 41 ASP n 1 42 SER n 1 43 MET n 1 44 MET n 1 45 LYS n 1 46 LEU n 1 47 LYS n 1 48 GLY n 1 49 VAL n 1 50 VAL n 1 51 ALA n 1 52 GLY n 1 53 ALA n 1 54 ARG n 1 55 SER n 1 56 LYS n 1 57 GLY n 1 58 GLU n 1 59 HIS n 1 60 LYS n 1 61 GLN n 1 62 LYS n 1 63 ILE n 1 64 PHE n 1 65 LEU n 1 66 THR n 1 67 ILE n 1 68 SER n 1 69 PHE n 1 70 GLY n 1 71 GLY n 1 72 ILE n 1 73 LYS n 1 74 ILE n 1 75 PHE n 1 76 ASP n 1 77 GLU n 1 78 LYS n 1 79 THR n 1 80 GLY n 1 81 ALA n 1 82 LEU n 1 83 GLN n 1 84 HIS n 1 85 HIS n 1 86 HIS n 1 87 ALA n 1 88 VAL n 1 89 HIS n 1 90 GLU n 1 91 ILE n 1 92 SER n 1 93 TYR n 1 94 ILE n 1 95 ALA n 1 96 LYS n 1 97 ASP n 1 98 ILE n 1 99 THR n 1 100 ASP n 1 101 HIS n 1 102 ARG n 1 103 ALA n 1 104 PHE n 1 105 GLY n 1 106 TYR n 1 107 VAL n 1 108 CYS n 1 109 GLY n 1 110 LYS n 1 111 GLU n 1 112 GLY n 1 113 ASN n 1 114 HIS n 1 115 ARG n 1 116 PHE n 1 117 VAL n 1 118 ALA n 1 119 ILE n 1 120 LYS n 1 121 THR n 1 122 ALA n 1 123 GLN n 1 124 ALA n 1 125 ALA n 1 126 GLU n 1 127 PRO n 1 128 VAL n 1 129 ILE n 1 130 LEU n 1 131 ASP n 1 132 LEU n 1 133 ARG n 1 134 ASP n 1 135 LEU n 1 136 PHE n 1 137 GLN n 1 138 LEU n 1 139 ILE n 1 140 TYR n 1 141 GLU n 1 142 LEU n 1 143 LYS n 1 144 GLN n 1 145 ARG n 1 146 GLU n 1 147 GLU n 1 148 LEU n 1 149 GLU n 1 150 LYS n 1 151 LYS n 1 152 ALA n 2 1 ASN n 2 2 PHE n 2 3 ASP n 2 4 ASN n 2 5 PRO n 2 6 VAL n 2 7 TYR n 2 8 ARG n 2 9 LYS n 2 10 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus Mus _entity_src_gen.pdbx_gene_src_gene DAB1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3), B834' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'Gateway pDEST15' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'Chemically synthesized' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP DAB1_MOUSE P97318 1 ;GQDRSEATLIKRFKGEGVRYKAKLIGIDEVSAARGDKLCQDSMMKLKGVVAGARSKGEHKQKIFLTISFGGIKIFDEKTG ALQHHHAVHEISYIAKDITDHRAFGYVCGKEGNHRFVAIKTAQAAEPVILDLRDLFQLIYELKQREELEKKA ; 23 ? 2 PDB 1NTV 1NTV 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1NTV A 1 ? 152 ? P97318 23 ? 174 ? 23 174 2 2 1NTV B 1 ? 10 ? 1NTV 5 ? 14 ? 5 14 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1NTV _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 2 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.83 _exptl_crystal.density_percent_sol 32.38 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 298.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.50 _exptl_crystal_grow.pdbx_details 'HEPES, PEG8000, ethanol, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 25K, pH 7.50' _exptl_crystal_grow.pdbx_pH_range . # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 ? ? 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2002-02-22 _diffrn_detector.details ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_scattering_type 2 1 M ? MAD x-ray 1 1 M ? MAD x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.909 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'CHESS BEAMLINE F1' _diffrn_source.pdbx_synchrotron_site CHESS _diffrn_source.pdbx_synchrotron_beamline F1 _diffrn_source.pdbx_wavelength 0.909 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1NTV _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 40 _reflns.d_resolution_high 1.5 _reflns.number_obs 24472 _reflns.number_all ? _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs 0.052 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 21.2 _reflns.B_iso_Wilson_estimate 15.3 _reflns.pdbx_redundancy 5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 2,1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.50 _reflns_shell.d_res_low 1.54 _reflns_shell.percent_possible_all 98.9 _reflns_shell.Rmerge_I_obs 0.235 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1NTV _refine.ls_number_reflns_obs 24472 _refine.ls_number_reflns_all 24472 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40.00 _refine.ls_d_res_high 1.50 _refine.ls_percent_reflns_obs 99.2 _refine.ls_R_factor_obs 0.2135 _refine.ls_R_factor_all 0.2135 _refine.ls_R_factor_R_work 0.222 _refine.ls_R_factor_R_free 0.245 _refine.ls_R_factor_R_free_error 0.005 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.9 _refine.ls_number_reflns_R_free 2412 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 19.2 _refine.aniso_B[1][1] -1.00 _refine.aniso_B[2][2] 2.08 _refine.aniso_B[3][3] -1.09 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.376 _refine.solvent_model_param_bsol 50.51 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 2 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1NTV _refine_analyze.Luzzati_coordinate_error_obs 0.18 _refine_analyze.Luzzati_sigma_a_obs -0.01 _refine_analyze.Luzzati_d_res_low_obs 40.00 _refine_analyze.Luzzati_coordinate_error_free 0.21 _refine_analyze.Luzzati_sigma_a_free 0.05 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1290 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 139 _refine_hist.number_atoms_total 1434 _refine_hist.d_res_high 1.50 _refine_hist.d_res_low 40.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.004 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 22.7 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.64 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 12 _refine_ls_shell.d_res_high 1.50 _refine_ls_shell.d_res_low 1.54 _refine_ls_shell.number_reflns_R_work 1669 _refine_ls_shell.R_factor_R_work 0.229 _refine_ls_shell.percent_reflns_obs 93.00 _refine_ls_shell.R_factor_R_free 0.253 _refine_ls_shell.R_factor_R_free_error 0.018 _refine_ls_shell.percent_reflns_R_free 10.3 _refine_ls_shell.number_reflns_R_free 192 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 ION.PARAM ION.TOP 'X-RAY DIFFRACTION' 3 I3P.PAR WATER.TOP 'X-RAY DIFFRACTION' 4 WATER.PARAM I3P.TOP 'X-RAY DIFFRACTION' # _struct.entry_id 1NTV _struct.title 'Crystal Structure of the Disabled-1 (Dab1) PTB domain-ApoER2 peptide complex' _struct.pdbx_descriptor 'Disabled homolog 1, Apolipoprotein E Receptor-2 peptide' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1NTV _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text 'beta-sandwich, SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 5 ? LYS A 14 ? SER A 27 LYS A 36 1 ? 10 HELX_P HELX_P2 2 GLY A 35 ? SER A 55 ? GLY A 57 SER A 77 1 ? 21 HELX_P HELX_P3 3 ALA A 87 ? HIS A 89 ? ALA A 109 HIS A 111 5 ? 3 HELX_P HELX_P4 4 ALA A 125 ? ARG A 145 ? ALA A 147 ARG A 167 1 ? 21 HELX_P HELX_P5 5 GLU A 147 ? ALA A 152 ? GLU A 169 ALA A 174 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 82 ? HIS A 86 ? LEU A 104 HIS A 108 A 2 GLY A 71 ? ASP A 76 ? GLY A 93 ASP A 98 A 3 GLN A 61 ? SER A 68 ? GLN A 83 SER A 90 A 4 VAL A 18 ? GLU A 29 ? VAL A 40 GLU A 51 A 5 ARG A 115 ? THR A 121 ? ARG A 137 THR A 143 A 6 ALA A 103 ? CYS A 108 ? ALA A 125 CYS A 130 A 7 ILE A 91 ? LYS A 96 ? ILE A 113 LYS A 118 A 8 PHE B 2 ? ASP B 3 ? PHE B 6 ASP B 7 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLN A 83 ? O GLN A 105 N ILE A 74 ? N ILE A 96 A 2 3 O PHE A 75 ? O PHE A 97 N PHE A 64 ? N PHE A 86 A 3 4 O ILE A 63 ? O ILE A 85 N ALA A 22 ? N ALA A 44 A 4 5 N ASP A 28 ? N ASP A 50 O PHE A 116 ? O PHE A 138 A 5 6 O ILE A 119 ? O ILE A 141 N PHE A 104 ? N PHE A 126 A 6 7 O GLY A 105 ? O GLY A 127 N ALA A 95 ? N ALA A 117 A 7 8 N ILE A 94 ? N ILE A 116 O PHE B 2 ? O PHE B 6 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 7 _struct_site.details 'BINDING SITE FOR RESIDUE PO4 A 200' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 LYS A 23 ? LYS A 45 . ? 1_555 ? 2 AC1 7 HIS A 59 ? HIS A 81 . ? 1_555 ? 3 AC1 7 LYS A 60 ? LYS A 82 . ? 1_555 ? 4 AC1 7 HOH D . ? HOH A 218 . ? 1_555 ? 5 AC1 7 HOH D . ? HOH A 297 . ? 1_555 ? 6 AC1 7 HOH D . ? HOH A 318 . ? 1_555 ? 7 AC1 7 HOH D . ? HOH A 324 . ? 1_555 ? # _database_PDB_matrix.entry_id 1NTV _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1NTV _atom_sites.fract_transf_matrix[1][1] 0.027588 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021870 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011096 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 23 23 GLY GLY A . n A 1 2 GLN 2 24 24 GLN GLN A . n A 1 3 ASP 3 25 25 ASP ASP A . n A 1 4 ARG 4 26 26 ARG ARG A . n A 1 5 SER 5 27 27 SER SER A . n A 1 6 GLU 6 28 28 GLU GLU A . n A 1 7 ALA 7 29 29 ALA ALA A . n A 1 8 THR 8 30 30 THR THR A . n A 1 9 LEU 9 31 31 LEU LEU A . n A 1 10 ILE 10 32 32 ILE ILE A . n A 1 11 LYS 11 33 33 LYS LYS A . n A 1 12 ARG 12 34 34 ARG ARG A . n A 1 13 PHE 13 35 35 PHE PHE A . n A 1 14 LYS 14 36 36 LYS LYS A . n A 1 15 GLY 15 37 37 GLY GLY A . n A 1 16 GLU 16 38 38 GLU GLU A . n A 1 17 GLY 17 39 39 GLY GLY A . n A 1 18 VAL 18 40 40 VAL VAL A . n A 1 19 ARG 19 41 41 ARG ARG A . n A 1 20 TYR 20 42 42 TYR TYR A . n A 1 21 LYS 21 43 43 LYS LYS A . n A 1 22 ALA 22 44 44 ALA ALA A . n A 1 23 LYS 23 45 45 LYS LYS A . n A 1 24 LEU 24 46 46 LEU LEU A . n A 1 25 ILE 25 47 47 ILE ILE A . n A 1 26 GLY 26 48 48 GLY GLY A . n A 1 27 ILE 27 49 49 ILE ILE A . n A 1 28 ASP 28 50 50 ASP ASP A . n A 1 29 GLU 29 51 51 GLU GLU A . n A 1 30 VAL 30 52 52 VAL VAL A . n A 1 31 SER 31 53 53 SER SER A . n A 1 32 ALA 32 54 54 ALA ALA A . n A 1 33 ALA 33 55 55 ALA ALA A . n A 1 34 ARG 34 56 56 ARG ARG A . n A 1 35 GLY 35 57 57 GLY GLY A . n A 1 36 ASP 36 58 58 ASP ASP A . n A 1 37 LYS 37 59 59 LYS LYS A . n A 1 38 LEU 38 60 60 LEU LEU A . n A 1 39 CYS 39 61 61 CYS CYS A . n A 1 40 GLN 40 62 62 GLN GLN A . n A 1 41 ASP 41 63 63 ASP ASP A . n A 1 42 SER 42 64 64 SER SER A . n A 1 43 MET 43 65 65 MET MET A . n A 1 44 MET 44 66 66 MET MET A . n A 1 45 LYS 45 67 67 LYS LYS A . n A 1 46 LEU 46 68 68 LEU LEU A . n A 1 47 LYS 47 69 69 LYS LYS A . n A 1 48 GLY 48 70 70 GLY GLY A . n A 1 49 VAL 49 71 71 VAL VAL A . n A 1 50 VAL 50 72 72 VAL VAL A . n A 1 51 ALA 51 73 73 ALA ALA A . n A 1 52 GLY 52 74 74 GLY GLY A . n A 1 53 ALA 53 75 75 ALA ALA A . n A 1 54 ARG 54 76 76 ARG ARG A . n A 1 55 SER 55 77 77 SER SER A . n A 1 56 LYS 56 78 78 LYS LYS A . n A 1 57 GLY 57 79 79 GLY GLY A . n A 1 58 GLU 58 80 80 GLU GLU A . n A 1 59 HIS 59 81 81 HIS HIS A . n A 1 60 LYS 60 82 82 LYS LYS A . n A 1 61 GLN 61 83 83 GLN GLN A . n A 1 62 LYS 62 84 84 LYS LYS A . n A 1 63 ILE 63 85 85 ILE ILE A . n A 1 64 PHE 64 86 86 PHE PHE A . n A 1 65 LEU 65 87 87 LEU LEU A . n A 1 66 THR 66 88 88 THR THR A . n A 1 67 ILE 67 89 89 ILE ILE A . n A 1 68 SER 68 90 90 SER SER A . n A 1 69 PHE 69 91 91 PHE PHE A . n A 1 70 GLY 70 92 92 GLY GLY A . n A 1 71 GLY 71 93 93 GLY GLY A . n A 1 72 ILE 72 94 94 ILE ILE A . n A 1 73 LYS 73 95 95 LYS LYS A . n A 1 74 ILE 74 96 96 ILE ILE A . n A 1 75 PHE 75 97 97 PHE PHE A . n A 1 76 ASP 76 98 98 ASP ASP A . n A 1 77 GLU 77 99 99 GLU GLU A . n A 1 78 LYS 78 100 100 LYS LYS A . n A 1 79 THR 79 101 101 THR THR A . n A 1 80 GLY 80 102 102 GLY GLY A . n A 1 81 ALA 81 103 103 ALA ALA A . n A 1 82 LEU 82 104 104 LEU LEU A . n A 1 83 GLN 83 105 105 GLN GLN A . n A 1 84 HIS 84 106 106 HIS HIS A . n A 1 85 HIS 85 107 107 HIS HIS A . n A 1 86 HIS 86 108 108 HIS HIS A . n A 1 87 ALA 87 109 109 ALA ALA A . n A 1 88 VAL 88 110 110 VAL VAL A . n A 1 89 HIS 89 111 111 HIS HIS A . n A 1 90 GLU 90 112 112 GLU GLU A . n A 1 91 ILE 91 113 113 ILE ILE A . n A 1 92 SER 92 114 114 SER SER A . n A 1 93 TYR 93 115 115 TYR TYR A . n A 1 94 ILE 94 116 116 ILE ILE A . n A 1 95 ALA 95 117 117 ALA ALA A . n A 1 96 LYS 96 118 118 LYS LYS A . n A 1 97 ASP 97 119 119 ASP ASP A . n A 1 98 ILE 98 120 120 ILE ILE A . n A 1 99 THR 99 121 121 THR THR A . n A 1 100 ASP 100 122 122 ASP ASP A . n A 1 101 HIS 101 123 123 HIS HIS A . n A 1 102 ARG 102 124 124 ARG ARG A . n A 1 103 ALA 103 125 125 ALA ALA A . n A 1 104 PHE 104 126 126 PHE PHE A . n A 1 105 GLY 105 127 127 GLY GLY A . n A 1 106 TYR 106 128 128 TYR TYR A . n A 1 107 VAL 107 129 129 VAL VAL A . n A 1 108 CYS 108 130 130 CYS CYS A . n A 1 109 GLY 109 131 131 GLY GLY A . n A 1 110 LYS 110 132 132 LYS LYS A . n A 1 111 GLU 111 133 133 GLU GLU A . n A 1 112 GLY 112 134 134 GLY GLY A . n A 1 113 ASN 113 135 135 ASN ASN A . n A 1 114 HIS 114 136 136 HIS HIS A . n A 1 115 ARG 115 137 137 ARG ARG A . n A 1 116 PHE 116 138 138 PHE PHE A . n A 1 117 VAL 117 139 139 VAL VAL A . n A 1 118 ALA 118 140 140 ALA ALA A . n A 1 119 ILE 119 141 141 ILE ILE A . n A 1 120 LYS 120 142 142 LYS LYS A . n A 1 121 THR 121 143 143 THR THR A . n A 1 122 ALA 122 144 144 ALA ALA A . n A 1 123 GLN 123 145 145 GLN GLN A . n A 1 124 ALA 124 146 146 ALA ALA A . n A 1 125 ALA 125 147 147 ALA ALA A . n A 1 126 GLU 126 148 148 GLU GLU A . n A 1 127 PRO 127 149 149 PRO PRO A . n A 1 128 VAL 128 150 150 VAL VAL A . n A 1 129 ILE 129 151 151 ILE ILE A . n A 1 130 LEU 130 152 152 LEU LEU A . n A 1 131 ASP 131 153 153 ASP ASP A . n A 1 132 LEU 132 154 154 LEU LEU A . n A 1 133 ARG 133 155 155 ARG ARG A . n A 1 134 ASP 134 156 156 ASP ASP A . n A 1 135 LEU 135 157 157 LEU LEU A . n A 1 136 PHE 136 158 158 PHE PHE A . n A 1 137 GLN 137 159 159 GLN GLN A . n A 1 138 LEU 138 160 160 LEU LEU A . n A 1 139 ILE 139 161 161 ILE ILE A . n A 1 140 TYR 140 162 162 TYR TYR A . n A 1 141 GLU 141 163 163 GLU GLU A . n A 1 142 LEU 142 164 164 LEU LEU A . n A 1 143 LYS 143 165 165 LYS LYS A . n A 1 144 GLN 144 166 166 GLN GLN A . n A 1 145 ARG 145 167 167 ARG ARG A . n A 1 146 GLU 146 168 168 GLU GLU A . n A 1 147 GLU 147 169 169 GLU GLU A . n A 1 148 LEU 148 170 170 LEU LEU A . n A 1 149 GLU 149 171 171 GLU GLU A . n A 1 150 LYS 150 172 172 LYS LYS A . n A 1 151 LYS 151 173 173 LYS LYS A . n A 1 152 ALA 152 174 174 ALA ALA A . n B 2 1 ASN 1 5 5 ASN ASN B . n B 2 2 PHE 2 6 6 PHE PHE B . n B 2 3 ASP 3 7 7 ASP ASP B . n B 2 4 ASN 4 8 8 ASN ASN B . n B 2 5 PRO 5 9 9 PRO PRO B . n B 2 6 VAL 6 10 10 VAL VAL B . n B 2 7 TYR 7 11 11 TYR TYR B . n B 2 8 ARG 8 12 12 ARG ARG B . n B 2 9 LYS 9 13 13 LYS LYS B . n B 2 10 THR 10 14 14 THR THR B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PO4 1 200 200 PO4 PO4 A . D 4 HOH 1 201 1 HOH HOH A . D 4 HOH 2 202 2 HOH HOH A . D 4 HOH 3 203 3 HOH HOH A . D 4 HOH 4 204 4 HOH HOH A . D 4 HOH 5 205 5 HOH HOH A . D 4 HOH 6 206 6 HOH HOH A . D 4 HOH 7 207 7 HOH HOH A . D 4 HOH 8 208 8 HOH HOH A . D 4 HOH 9 209 9 HOH HOH A . D 4 HOH 10 210 10 HOH HOH A . D 4 HOH 11 211 11 HOH HOH A . D 4 HOH 12 212 12 HOH HOH A . D 4 HOH 13 213 13 HOH HOH A . D 4 HOH 14 214 14 HOH HOH A . D 4 HOH 15 215 15 HOH HOH A . D 4 HOH 16 216 16 HOH HOH A . D 4 HOH 17 217 17 HOH HOH A . D 4 HOH 18 218 18 HOH HOH A . D 4 HOH 19 219 19 HOH HOH A . D 4 HOH 20 220 20 HOH HOH A . D 4 HOH 21 221 21 HOH HOH A . D 4 HOH 22 222 22 HOH HOH A . D 4 HOH 23 223 23 HOH HOH A . D 4 HOH 24 224 24 HOH HOH A . D 4 HOH 25 225 25 HOH HOH A . D 4 HOH 26 226 26 HOH HOH A . D 4 HOH 27 227 27 HOH HOH A . D 4 HOH 28 228 28 HOH HOH A . D 4 HOH 29 229 29 HOH HOH A . D 4 HOH 30 230 30 HOH HOH A . D 4 HOH 31 231 31 HOH HOH A . D 4 HOH 32 232 32 HOH HOH A . D 4 HOH 33 233 33 HOH HOH A . D 4 HOH 34 234 34 HOH HOH A . D 4 HOH 35 235 35 HOH HOH A . D 4 HOH 36 236 36 HOH HOH A . D 4 HOH 37 237 37 HOH HOH A . D 4 HOH 38 238 38 HOH HOH A . D 4 HOH 39 239 39 HOH HOH A . D 4 HOH 40 240 40 HOH HOH A . D 4 HOH 41 241 41 HOH HOH A . D 4 HOH 42 242 42 HOH HOH A . D 4 HOH 43 243 43 HOH HOH A . D 4 HOH 44 244 44 HOH HOH A . D 4 HOH 45 245 45 HOH HOH A . D 4 HOH 46 246 46 HOH HOH A . D 4 HOH 47 247 47 HOH HOH A . D 4 HOH 48 248 48 HOH HOH A . D 4 HOH 49 249 49 HOH HOH A . D 4 HOH 50 250 50 HOH HOH A . D 4 HOH 51 251 51 HOH HOH A . D 4 HOH 52 252 52 HOH HOH A . D 4 HOH 53 253 53 HOH HOH A . D 4 HOH 54 254 54 HOH HOH A . D 4 HOH 55 255 55 HOH HOH A . D 4 HOH 56 256 56 HOH HOH A . D 4 HOH 57 257 57 HOH HOH A . D 4 HOH 58 258 58 HOH HOH A . D 4 HOH 59 259 59 HOH HOH A . D 4 HOH 60 260 60 HOH HOH A . D 4 HOH 61 261 61 HOH HOH A . D 4 HOH 62 262 62 HOH HOH A . D 4 HOH 63 263 63 HOH HOH A . D 4 HOH 64 264 64 HOH HOH A . D 4 HOH 65 265 65 HOH HOH A . D 4 HOH 66 266 66 HOH HOH A . D 4 HOH 67 267 67 HOH HOH A . D 4 HOH 68 268 68 HOH HOH A . D 4 HOH 69 269 69 HOH HOH A . D 4 HOH 70 270 70 HOH HOH A . D 4 HOH 71 271 71 HOH HOH A . D 4 HOH 72 272 72 HOH HOH A . D 4 HOH 73 273 73 HOH HOH A . D 4 HOH 74 274 74 HOH HOH A . D 4 HOH 75 275 75 HOH HOH A . D 4 HOH 76 276 76 HOH HOH A . D 4 HOH 77 277 77 HOH HOH A . D 4 HOH 78 278 78 HOH HOH A . D 4 HOH 79 279 79 HOH HOH A . D 4 HOH 80 280 80 HOH HOH A . D 4 HOH 81 281 81 HOH HOH A . D 4 HOH 82 282 82 HOH HOH A . D 4 HOH 83 283 83 HOH HOH A . D 4 HOH 84 284 84 HOH HOH A . D 4 HOH 85 285 85 HOH HOH A . D 4 HOH 86 286 86 HOH HOH A . D 4 HOH 87 287 87 HOH HOH A . D 4 HOH 88 288 88 HOH HOH A . D 4 HOH 89 289 89 HOH HOH A . D 4 HOH 90 290 90 HOH HOH A . D 4 HOH 91 291 91 HOH HOH A . D 4 HOH 92 292 94 HOH HOH A . D 4 HOH 93 293 95 HOH HOH A . D 4 HOH 94 294 97 HOH HOH A . D 4 HOH 95 295 98 HOH HOH A . D 4 HOH 96 296 99 HOH HOH A . D 4 HOH 97 297 100 HOH HOH A . D 4 HOH 98 298 101 HOH HOH A . D 4 HOH 99 299 102 HOH HOH A . D 4 HOH 100 300 103 HOH HOH A . D 4 HOH 101 301 104 HOH HOH A . D 4 HOH 102 302 105 HOH HOH A . D 4 HOH 103 303 106 HOH HOH A . D 4 HOH 104 304 107 HOH HOH A . D 4 HOH 105 305 108 HOH HOH A . D 4 HOH 106 306 109 HOH HOH A . D 4 HOH 107 307 110 HOH HOH A . D 4 HOH 108 308 111 HOH HOH A . D 4 HOH 109 309 113 HOH HOH A . D 4 HOH 110 310 114 HOH HOH A . D 4 HOH 111 311 115 HOH HOH A . D 4 HOH 112 312 116 HOH HOH A . D 4 HOH 113 313 117 HOH HOH A . D 4 HOH 114 314 118 HOH HOH A . D 4 HOH 115 315 119 HOH HOH A . D 4 HOH 116 316 120 HOH HOH A . D 4 HOH 117 317 121 HOH HOH A . D 4 HOH 118 318 122 HOH HOH A . D 4 HOH 119 319 123 HOH HOH A . D 4 HOH 120 320 124 HOH HOH A . D 4 HOH 121 321 125 HOH HOH A . D 4 HOH 122 322 126 HOH HOH A . D 4 HOH 123 323 127 HOH HOH A . D 4 HOH 124 324 128 HOH HOH A . D 4 HOH 125 325 130 HOH HOH A . D 4 HOH 126 326 131 HOH HOH A . D 4 HOH 127 327 132 HOH HOH A . D 4 HOH 128 328 133 HOH HOH A . D 4 HOH 129 329 134 HOH HOH A . D 4 HOH 130 330 135 HOH HOH A . D 4 HOH 131 331 136 HOH HOH A . D 4 HOH 132 332 137 HOH HOH A . D 4 HOH 133 333 138 HOH HOH A . D 4 HOH 134 334 139 HOH HOH A . E 4 HOH 1 92 92 HOH HOH B . E 4 HOH 2 93 93 HOH HOH B . E 4 HOH 3 96 96 HOH HOH B . E 4 HOH 4 112 112 HOH HOH B . E 4 HOH 5 129 129 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1610 ? 1 MORE -13 ? 1 'SSA (A^2)' 9020 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-04-15 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-01-31 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Experimental preparation' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category exptl_crystal_grow # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 4 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_exptl_crystal_grow.temp' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 CCP4 'model building' . ? 3 CNS refinement . ? 4 CCP4 phasing . ? 5 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id GLN _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 145 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -113.17 _pdbx_validate_torsion.psi -164.29 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'PHOSPHATE ION' PO4 4 water HOH #