data_1NWQ # _entry.id 1NWQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1NWQ pdb_00001nwq 10.2210/pdb1nwq/pdb NDB PD0395 ? ? RCSB RCSB018291 ? ? WWPDB D_1000018291 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1DH3 _pdbx_database_related.details ;CRYSTAL STRUCTURE OF A CREB BZIP-CRE COMPLEX REVEALS THE BASIS FOR CREB FAMILY SELECTIVE DIMERIZATION AND DNA BINDING ; _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1NWQ _pdbx_database_status.recvd_initial_deposition_date 2003-02-06 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Miller, M.' 1 'Shuman, J.D.' 2 'Sebastian, T.' 3 'Dauter, Z.' 4 'Johnson, P.F.' 5 # _citation.id primary _citation.title ;Structural Basis for DNA Recognition by the Basic Region Leucine Zipper Transcription Factor CCAAT/enhancer Binding Protein Alpha ; _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 278 _citation.page_first 15178 _citation.page_last 15184 _citation.year 2003 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12578822 _citation.pdbx_database_id_DOI 10.1074/jbc.M300417200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Miller, M.' 1 ? primary 'Shuman, J.D.' 2 ? primary 'Sebastian, T.' 3 ? primary 'Dauter, Z.' 4 ? primary 'Johnson, P.F.' 5 ? # _cell.entry_id 1NWQ _cell.length_a 140.892 _cell.length_b 53.089 _cell.length_c 67.406 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1NWQ _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*TP*TP*CP*CP*TP*AP*TP*TP*GP*CP*GP*CP*AP*AP*TP*CP*CP*AP*GP*TP*T)-3'" 6364.120 1 ? ? ? ? 2 polymer syn "5'-D(*AP*AP*AP*CP*TP*GP*GP*AP*TP*TP*GP*CP*GP*CP*AP*AP*TP*AP*GP*GP*A)-3'" 6520.249 1 ? ? ? ? 3 polymer man 'CCAAT/enhancer binding protein alpha' 7428.297 2 ? ? 'BASIC REGION, LEUCINE ZIPPER DOMAIN' ? 4 water nat water 18.015 34 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name 'C/EBP alpha, Transcription Factor C/EBPalpha' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no ;(DT)(DT)(DC)(DC)(DT)(DA)(DT)(DT)(DG)(DC)(DG)(DC)(DA)(DA)(DT)(DC)(DC)(DA)(DG)(DT) (DT) ; TTCCTATTGCGCAATCCAGTT B ? 2 polydeoxyribonucleotide no no ;(DA)(DA)(DA)(DC)(DT)(DG)(DG)(DA)(DT)(DT)(DG)(DC)(DG)(DC)(DA)(DA)(DT)(DA)(DG)(DG) (DA) ; AAACTGGATTGCGCAATAGGA D ? 3 'polypeptide(L)' no no GSNSNEYRVRRERNNIAVRKSRDKAKQRNVETQQKVLELTSDNDRLRKRVEQLSRELDTLRG GSNSNEYRVRRERNNIAVRKSRDKAKQRNVETQQKVLELTSDNDRLRKRVEQLSRELDTLRG A,C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DT n 1 3 DC n 1 4 DC n 1 5 DT n 1 6 DA n 1 7 DT n 1 8 DT n 1 9 DG n 1 10 DC n 1 11 DG n 1 12 DC n 1 13 DA n 1 14 DA n 1 15 DT n 1 16 DC n 1 17 DC n 1 18 DA n 1 19 DG n 1 20 DT n 1 21 DT n 2 1 DA n 2 2 DA n 2 3 DA n 2 4 DC n 2 5 DT n 2 6 DG n 2 7 DG n 2 8 DA n 2 9 DT n 2 10 DT n 2 11 DG n 2 12 DC n 2 13 DG n 2 14 DC n 2 15 DA n 2 16 DA n 2 17 DT n 2 18 DA n 2 19 DG n 2 20 DG n 2 21 DA n 3 1 GLY n 3 2 SER n 3 3 ASN n 3 4 SER n 3 5 ASN n 3 6 GLU n 3 7 TYR n 3 8 ARG n 3 9 VAL n 3 10 ARG n 3 11 ARG n 3 12 GLU n 3 13 ARG n 3 14 ASN n 3 15 ASN n 3 16 ILE n 3 17 ALA n 3 18 VAL n 3 19 ARG n 3 20 LYS n 3 21 SER n 3 22 ARG n 3 23 ASP n 3 24 LYS n 3 25 ALA n 3 26 LYS n 3 27 GLN n 3 28 ARG n 3 29 ASN n 3 30 VAL n 3 31 GLU n 3 32 THR n 3 33 GLN n 3 34 GLN n 3 35 LYS n 3 36 VAL n 3 37 LEU n 3 38 GLU n 3 39 LEU n 3 40 THR n 3 41 SER n 3 42 ASP n 3 43 ASN n 3 44 ASP n 3 45 ARG n 3 46 LEU n 3 47 ARG n 3 48 LYS n 3 49 ARG n 3 50 VAL n 3 51 GLU n 3 52 GLN n 3 53 LEU n 3 54 SER n 3 55 ARG n 3 56 GLU n 3 57 LEU n 3 58 ASP n 3 59 THR n 3 60 LEU n 3 61 ARG n 3 62 GLY n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Norway rat' _entity_src_gen.gene_src_genus Rattus _entity_src_gen.pdbx_gene_src_gene CEBPA _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Rattus norvegicus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10116 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PT5 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP CEBPA_RAT P05554 3 NSNEYRVRRERNNIAVRKSRDKAKQRNVETQQKVLELTSDNDRLRKRVEQLSRELDTLRG 281 ? 2 PDB 1NWQ 1NWQ 1 ? ? ? 3 PDB 1NWQ 1NWQ 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1NWQ A 3 ? 62 ? P05554 281 ? 340 ? 281 340 2 1 1NWQ C 3 ? 62 ? P05554 281 ? 340 ? 281 340 3 2 1NWQ B 1 ? 21 ? 1NWQ -10 ? 11 ? -10 11 4 3 1NWQ D 1 ? 21 ? 1NWQ -12 ? 9 ? -12 9 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1NWQ GLY A 1 ? UNP P05554 ? ? 'cloning artifact' 279 1 1 1NWQ SER A 2 ? UNP P05554 ? ? 'cloning artifact' 280 2 2 1NWQ GLY C 1 ? UNP P05554 ? ? 'cloning artifact' 279 3 2 1NWQ SER C 2 ? UNP P05554 ? ? 'cloning artifact' 280 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1NWQ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.72 _exptl_crystal.density_percent_sol 73.72 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.7 _exptl_crystal_grow.pdbx_details 'NACL, MGCL2, PEG 400, MES, GLYCEROL, pH 5.7, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.07 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X9B' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X9B _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.07 # _reflns.entry_id 1NWQ _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 40.00 _reflns.d_resolution_high 2.80 _reflns.number_obs 12416 _reflns.number_all ? _reflns.percent_possible_obs 95.6 _reflns.pdbx_Rmerge_I_obs 0.076 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 19.2 _reflns.B_iso_Wilson_estimate 78.5 _reflns.pdbx_redundancy 17.8 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.80 _reflns_shell.d_res_low 2.90 _reflns_shell.percent_possible_all 91.6 _reflns_shell.Rmerge_I_obs 0.415 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.7 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1NWQ _refine.ls_number_reflns_obs 12415 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 1483361.25 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF 1483361.25 _refine.ls_d_res_low 38.53 _refine.ls_d_res_high 2.80 _refine.ls_percent_reflns_obs 95.4 _refine.ls_R_factor_obs 0.221 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.221 _refine.ls_R_factor_R_free 0.275 _refine.ls_R_factor_R_free_error 0.011 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 630 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 92.0 _refine.aniso_B[1][1] -21.10 _refine.aniso_B[2][2] 43.07 _refine.aniso_B[3][3] -21.97 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.25376 _refine.solvent_model_param_bsol 37.0305 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1DH3' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1NWQ _refine_analyze.Luzzati_coordinate_error_obs 0.48 _refine_analyze.Luzzati_sigma_a_obs 0.77 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.62 _refine_analyze.Luzzati_sigma_a_free 0.83 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1020 _refine_hist.pdbx_number_atoms_nucleic_acid 855 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 34 _refine_hist.number_atoms_total 1909 _refine_hist.d_res_high 2.80 _refine_hist.d_res_low 38.53 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.019 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 2.0 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 20.5 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.25 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 3.75 3.00 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 5.72 4.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 6.84 4.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 10.05 7.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 8 _refine_ls_shell.d_res_high 2.80 _refine_ls_shell.d_res_low 2.93 _refine_ls_shell.number_reflns_R_work 1331 _refine_ls_shell.R_factor_R_work 0.416 _refine_ls_shell.percent_reflns_obs 90.1 _refine_ls_shell.R_factor_R_free 0.478 _refine_ls_shell.R_factor_R_free_error 0.050 _refine_ls_shell.percent_reflns_R_free 6.5 _refine_ls_shell.number_reflns_R_free 93 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 DNA-RNA_REP.PARAM DNA-RNA.TOP 'X-RAY DIFFRACTION' 3 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 4 ION.PARAM ION.TOP 'X-RAY DIFFRACTION' # _struct.entry_id 1NWQ _struct.title 'CRYSTAL STRUCTURE OF C/EBPALPHA-DNA COMPLEX' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1NWQ _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text 'BASIC LEUCINE ZIPPER, PROTEIN-DNA COMPLEX, TRANSCRIPTION-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN C 3 ? ARG C 61 ? ASN A 281 ARG A 339 1 ? 59 HELX_P HELX_P2 2 ASN D 3 ? THR D 59 ? ASN C 281 THR C 337 1 ? 57 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DT 2 N3 ? ? ? 1_555 B DA 21 N1 ? ? B DT -9 D DA 9 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog2 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG 20 N1 ? ? B DC -8 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG 20 O6 ? ? B DC -8 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG 20 N2 ? ? B DC -8 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 4 N3 ? ? ? 1_555 B DG 19 N1 ? ? B DC -7 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 4 N4 ? ? ? 1_555 B DG 19 O6 ? ? B DC -7 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 4 O2 ? ? ? 1_555 B DG 19 N2 ? ? B DC -7 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 4 O2 ? ? ? 1_555 B DG 20 N2 ? ? B DC -7 D DG 8 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog9 hydrog ? ? A DT 5 N3 ? ? ? 1_555 B DA 18 N1 ? ? B DT -6 D DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DA 18 N6 ? ? B DT -6 D DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 17 N3 ? ? B DA -5 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 17 O4 ? ? B DA -5 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B DA 16 N1 ? ? B DT -4 D DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B DA 16 N6 ? ? B DT -4 D DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 15 N1 ? ? B DT -3 D DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 15 N6 ? ? B DT -3 D DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 14 N3 ? ? B DG -2 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 14 O2 ? ? B DG -2 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 14 N4 ? ? B DG -2 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 10 N3 ? ? ? 1_555 B DG 13 N1 ? ? B DC -1 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 10 N4 ? ? ? 1_555 B DG 13 O6 ? ? B DC -1 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 10 O2 ? ? ? 1_555 B DG 13 N2 ? ? B DC -1 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 11 N1 ? ? ? 1_555 B DC 12 N3 ? ? B DG 1 D DC -1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 11 N2 ? ? ? 1_555 B DC 12 O2 ? ? B DG 1 D DC -1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 11 O6 ? ? ? 1_555 B DC 12 N4 ? ? B DG 1 D DC -1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DC 12 N3 ? ? ? 1_555 B DG 11 N1 ? ? B DC 2 D DG -2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DC 12 N4 ? ? ? 1_555 B DG 11 O6 ? ? B DC 2 D DG -2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DC 12 O2 ? ? ? 1_555 B DG 11 N2 ? ? B DC 2 D DG -2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DA 13 N1 ? ? ? 1_555 B DT 10 N3 ? ? B DA 3 D DT -3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DA 13 N6 ? ? ? 1_555 B DT 10 O4 ? ? B DA 3 D DT -3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DA 14 N1 ? ? ? 1_555 B DT 9 N3 ? ? B DA 4 D DT -4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DA 14 N6 ? ? ? 1_555 B DT 9 O4 ? ? B DA 4 D DT -4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DT 15 N3 ? ? ? 1_555 B DA 8 N1 ? ? B DT 5 D DA -5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DT 15 O4 ? ? ? 1_555 B DA 8 N6 ? ? B DT 5 D DA -5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DC 16 N3 ? ? ? 1_555 B DG 7 N1 ? ? B DC 6 D DG -6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DC 16 N4 ? ? ? 1_555 B DG 7 O6 ? ? B DC 6 D DG -6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DC 16 O2 ? ? ? 1_555 B DG 7 N2 ? ? B DC 6 D DG -6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DC 17 N3 ? ? ? 1_555 B DG 6 N1 ? ? B DC 7 D DG -7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DC 17 N4 ? ? ? 1_555 B DG 6 O6 ? ? B DC 7 D DG -7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DC 17 O2 ? ? ? 1_555 B DG 6 N2 ? ? B DC 7 D DG -7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DA 18 N1 ? ? ? 1_555 B DT 5 N3 ? ? B DA 8 D DT -8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DA 18 N6 ? ? ? 1_555 B DT 5 O4 ? ? B DA 8 D DT -8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DG 19 N1 ? ? ? 1_555 B DC 4 N3 ? ? B DG 9 D DC -9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A DG 19 N2 ? ? ? 1_555 B DC 4 O2 ? ? B DG 9 D DC -9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A DG 19 O6 ? ? ? 1_555 B DC 4 N4 ? ? B DG 9 D DC -9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A DT 20 N3 ? ? ? 1_555 B DA 3 N1 ? ? B DT 10 D DA -10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A DT 20 O4 ? ? ? 1_555 B DA 3 N6 ? ? B DT 10 D DA -10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A DT 21 O4 ? ? ? 1_555 B DA 2 N6 ? ? B DT 11 D DA -11 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 1NWQ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1NWQ _atom_sites.fract_transf_matrix[1][1] 0.007098 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018836 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014835 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 -10 -10 DT T B . n A 1 2 DT 2 -9 -9 DT T B . n A 1 3 DC 3 -8 -8 DC C B . n A 1 4 DC 4 -7 -7 DC C B . n A 1 5 DT 5 -6 -6 DT T B . n A 1 6 DA 6 -5 -5 DA A B . n A 1 7 DT 7 -4 -4 DT T B . n A 1 8 DT 8 -3 -3 DT T B . n A 1 9 DG 9 -2 -2 DG G B . n A 1 10 DC 10 -1 -1 DC C B . n A 1 11 DG 11 1 1 DG G B . n A 1 12 DC 12 2 2 DC C B . n A 1 13 DA 13 3 3 DA A B . n A 1 14 DA 14 4 4 DA A B . n A 1 15 DT 15 5 5 DT T B . n A 1 16 DC 16 6 6 DC C B . n A 1 17 DC 17 7 7 DC C B . n A 1 18 DA 18 8 8 DA A B . n A 1 19 DG 19 9 9 DG G B . n A 1 20 DT 20 10 10 DT T B . n A 1 21 DT 21 11 11 DT T B . n B 2 1 DA 1 -12 -12 DA A D . n B 2 2 DA 2 -11 -11 DA A D . n B 2 3 DA 3 -10 -10 DA A D . n B 2 4 DC 4 -9 -9 DC C D . n B 2 5 DT 5 -8 -8 DT T D . n B 2 6 DG 6 -7 -7 DG G D . n B 2 7 DG 7 -6 -6 DG G D . n B 2 8 DA 8 -5 -5 DA A D . n B 2 9 DT 9 -4 -4 DT T D . n B 2 10 DT 10 -3 -3 DT T D . n B 2 11 DG 11 -2 -2 DG G D . n B 2 12 DC 12 -1 -1 DC C D . n B 2 13 DG 13 1 1 DG G D . n B 2 14 DC 14 2 2 DC C D . n B 2 15 DA 15 3 3 DA A D . n B 2 16 DA 16 4 4 DA A D . n B 2 17 DT 17 5 5 DT T D . n B 2 18 DA 18 6 6 DA A D . n B 2 19 DG 19 7 7 DG G D . n B 2 20 DG 20 8 8 DG G D . n B 2 21 DA 21 9 9 DA A D . n C 3 1 GLY 1 279 ? ? ? A . n C 3 2 SER 2 280 ? ? ? A . n C 3 3 ASN 3 281 281 ASN ASN A . n C 3 4 SER 4 282 282 SER SER A . n C 3 5 ASN 5 283 283 ASN ASN A . n C 3 6 GLU 6 284 284 GLU GLU A . n C 3 7 TYR 7 285 285 TYR TYR A . n C 3 8 ARG 8 286 286 ARG ARG A . n C 3 9 VAL 9 287 287 VAL VAL A . n C 3 10 ARG 10 288 288 ARG ARG A . n C 3 11 ARG 11 289 289 ARG ARG A . n C 3 12 GLU 12 290 290 GLU GLU A . n C 3 13 ARG 13 291 291 ARG ARG A . n C 3 14 ASN 14 292 292 ASN ASN A . n C 3 15 ASN 15 293 293 ASN ASN A . n C 3 16 ILE 16 294 294 ILE ILE A . n C 3 17 ALA 17 295 295 ALA ALA A . n C 3 18 VAL 18 296 296 VAL VAL A . n C 3 19 ARG 19 297 297 ARG ARG A . n C 3 20 LYS 20 298 298 LYS LYS A . n C 3 21 SER 21 299 299 SER SER A . n C 3 22 ARG 22 300 300 ARG ARG A . n C 3 23 ASP 23 301 301 ASP ASP A . n C 3 24 LYS 24 302 302 LYS LYS A . n C 3 25 ALA 25 303 303 ALA ALA A . n C 3 26 LYS 26 304 304 LYS LYS A . n C 3 27 GLN 27 305 305 GLN GLN A . n C 3 28 ARG 28 306 306 ARG ARG A . n C 3 29 ASN 29 307 307 ASN ASN A . n C 3 30 VAL 30 308 308 VAL VAL A . n C 3 31 GLU 31 309 309 GLU GLU A . n C 3 32 THR 32 310 310 THR THR A . n C 3 33 GLN 33 311 311 GLN GLN A . n C 3 34 GLN 34 312 312 GLN GLN A . n C 3 35 LYS 35 313 313 LYS LYS A . n C 3 36 VAL 36 314 314 VAL VAL A . n C 3 37 LEU 37 315 315 LEU LEU A . n C 3 38 GLU 38 316 316 GLU GLU A . n C 3 39 LEU 39 317 317 LEU LEU A . n C 3 40 THR 40 318 318 THR THR A . n C 3 41 SER 41 319 319 SER SER A . n C 3 42 ASP 42 320 320 ASP ASP A . n C 3 43 ASN 43 321 321 ASN ASN A . n C 3 44 ASP 44 322 322 ASP ASP A . n C 3 45 ARG 45 323 323 ARG ARG A . n C 3 46 LEU 46 324 324 LEU LEU A . n C 3 47 ARG 47 325 325 ARG ARG A . n C 3 48 LYS 48 326 326 LYS LYS A . n C 3 49 ARG 49 327 327 ARG ARG A . n C 3 50 VAL 50 328 328 VAL VAL A . n C 3 51 GLU 51 329 329 GLU GLU A . n C 3 52 GLN 52 330 330 GLN GLN A . n C 3 53 LEU 53 331 331 LEU LEU A . n C 3 54 SER 54 332 332 SER SER A . n C 3 55 ARG 55 333 333 ARG ARG A . n C 3 56 GLU 56 334 334 GLU GLU A . n C 3 57 LEU 57 335 335 LEU LEU A . n C 3 58 ASP 58 336 336 ASP ASP A . n C 3 59 THR 59 337 337 THR THR A . n C 3 60 LEU 60 338 338 LEU LEU A . n C 3 61 ARG 61 339 339 ARG ARG A . n C 3 62 GLY 62 340 340 GLY GLY A . n D 3 1 GLY 1 279 ? ? ? C . n D 3 2 SER 2 280 ? ? ? C . n D 3 3 ASN 3 281 281 ASN ASN C . n D 3 4 SER 4 282 282 SER SER C . n D 3 5 ASN 5 283 283 ASN ASN C . n D 3 6 GLU 6 284 284 GLU GLU C . n D 3 7 TYR 7 285 285 TYR TYR C . n D 3 8 ARG 8 286 286 ARG ARG C . n D 3 9 VAL 9 287 287 VAL VAL C . n D 3 10 ARG 10 288 288 ARG ARG C . n D 3 11 ARG 11 289 289 ARG ARG C . n D 3 12 GLU 12 290 290 GLU GLU C . n D 3 13 ARG 13 291 291 ARG ARG C . n D 3 14 ASN 14 292 292 ASN ASN C . n D 3 15 ASN 15 293 293 ASN ASN C . n D 3 16 ILE 16 294 294 ILE ILE C . n D 3 17 ALA 17 295 295 ALA ALA C . n D 3 18 VAL 18 296 296 VAL VAL C . n D 3 19 ARG 19 297 297 ARG ARG C . n D 3 20 LYS 20 298 298 LYS LYS C . n D 3 21 SER 21 299 299 SER SER C . n D 3 22 ARG 22 300 300 ARG ARG C . n D 3 23 ASP 23 301 301 ASP ASP C . n D 3 24 LYS 24 302 302 LYS LYS C . n D 3 25 ALA 25 303 303 ALA ALA C . n D 3 26 LYS 26 304 304 LYS LYS C . n D 3 27 GLN 27 305 305 GLN GLN C . n D 3 28 ARG 28 306 306 ARG ARG C . n D 3 29 ASN 29 307 307 ASN ASN C . n D 3 30 VAL 30 308 308 VAL VAL C . n D 3 31 GLU 31 309 309 GLU GLU C . n D 3 32 THR 32 310 310 THR THR C . n D 3 33 GLN 33 311 311 GLN GLN C . n D 3 34 GLN 34 312 312 GLN GLN C . n D 3 35 LYS 35 313 313 LYS LYS C . n D 3 36 VAL 36 314 314 VAL VAL C . n D 3 37 LEU 37 315 315 LEU LEU C . n D 3 38 GLU 38 316 316 GLU GLU C . n D 3 39 LEU 39 317 317 LEU LEU C . n D 3 40 THR 40 318 318 THR THR C . n D 3 41 SER 41 319 319 SER SER C . n D 3 42 ASP 42 320 320 ASP ASP C . n D 3 43 ASN 43 321 321 ASN ASN C . n D 3 44 ASP 44 322 322 ASP ASP C . n D 3 45 ARG 45 323 323 ARG ARG C . n D 3 46 LEU 46 324 324 LEU LEU C . n D 3 47 ARG 47 325 325 ARG ARG C . n D 3 48 LYS 48 326 326 LYS LYS C . n D 3 49 ARG 49 327 327 ARG ARG C . n D 3 50 VAL 50 328 328 VAL VAL C . n D 3 51 GLU 51 329 329 GLU GLU C . n D 3 52 GLN 52 330 330 GLN GLN C . n D 3 53 LEU 53 331 331 LEU LEU C . n D 3 54 SER 54 332 332 SER SER C . n D 3 55 ARG 55 333 333 ARG ARG C . n D 3 56 GLU 56 334 334 GLU GLU C . n D 3 57 LEU 57 335 335 LEU LEU C . n D 3 58 ASP 58 336 336 ASP ASP C . n D 3 59 THR 59 337 337 THR THR C . n D 3 60 LEU 60 338 338 LEU LEU C . n D 3 61 ARG 61 339 339 ARG ARG C . n D 3 62 GLY 62 340 340 GLY GLY C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 HOH 1 403 403 HOH HOH B . E 4 HOH 2 411 411 HOH HOH B . E 4 HOH 3 416 416 HOH HOH B . E 4 HOH 4 417 417 HOH HOH B . E 4 HOH 5 420 420 HOH HOH B . E 4 HOH 6 424 424 HOH HOH B . F 4 HOH 1 401 401 HOH HOH D . F 4 HOH 2 412 412 HOH HOH D . F 4 HOH 3 413 413 HOH HOH D . F 4 HOH 4 421 421 HOH HOH D . F 4 HOH 5 423 423 HOH HOH D . G 4 HOH 1 406 406 HOH HOH A . G 4 HOH 2 407 407 HOH HOH A . G 4 HOH 3 409 409 HOH HOH A . G 4 HOH 4 414 414 HOH HOH A . G 4 HOH 5 425 425 HOH HOH A . G 4 HOH 6 426 426 HOH HOH A . H 4 HOH 1 402 402 HOH HOH C . H 4 HOH 2 404 404 HOH HOH C . H 4 HOH 3 405 405 HOH HOH C . H 4 HOH 4 408 408 HOH HOH C . H 4 HOH 5 410 410 HOH HOH C . H 4 HOH 6 415 415 HOH HOH C . H 4 HOH 7 418 418 HOH HOH C . H 4 HOH 8 419 419 HOH HOH C . H 4 HOH 9 422 422 HOH HOH C . H 4 HOH 10 427 427 HOH HOH C . H 4 HOH 11 428 428 HOH HOH C . H 4 HOH 12 429 429 HOH HOH C . H 4 HOH 13 430 430 HOH HOH C . H 4 HOH 14 431 431 HOH HOH C . H 4 HOH 15 432 432 HOH HOH C . H 4 HOH 16 433 433 HOH HOH C . H 4 HOH 17 434 434 HOH HOH C . # _struct_biol_keywords.biol_id 1 _struct_biol_keywords.text 'Protein-DNA complex in the asymmetric unit.' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-05-13 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.0 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 AMoRE phasing . ? 4 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" D DT 5 ? ? "C2'" D DT 5 ? ? "C1'" D DT 5 ? ? 94.33 102.40 -8.07 0.80 N 2 1 CA C LEU 315 ? ? CB C LEU 315 ? ? CG C LEU 315 ? ? 91.07 115.30 -24.23 2.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 285 ? ? -25.72 -82.30 2 1 ASN A 293 ? ? -53.43 -5.16 3 1 THR A 337 ? ? -73.31 -71.80 4 1 LEU A 338 ? ? -35.35 -86.93 5 1 ARG A 339 ? ? -42.17 -79.40 6 1 SER C 282 ? ? -96.12 -70.65 7 1 GLN C 305 ? ? -43.55 -81.53 8 1 GLU C 309 ? ? -20.44 -57.44 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DC B -7 ? ? 0.072 'SIDE CHAIN' 2 1 DG D -7 ? ? 0.053 'SIDE CHAIN' 3 1 TYR C 285 ? ? 0.085 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 279 ? C GLY 1 2 1 Y 1 A SER 280 ? C SER 2 3 1 Y 1 C GLY 279 ? D GLY 1 4 1 Y 1 C SER 280 ? D SER 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DA OP3 O N N 74 DA P P N N 75 DA OP1 O N N 76 DA OP2 O N N 77 DA "O5'" O N N 78 DA "C5'" C N N 79 DA "C4'" C N R 80 DA "O4'" O N N 81 DA "C3'" C N S 82 DA "O3'" O N N 83 DA "C2'" C N N 84 DA "C1'" C N R 85 DA N9 N Y N 86 DA C8 C Y N 87 DA N7 N Y N 88 DA C5 C Y N 89 DA C6 C Y N 90 DA N6 N N N 91 DA N1 N Y N 92 DA C2 C Y N 93 DA N3 N Y N 94 DA C4 C Y N 95 DA HOP3 H N N 96 DA HOP2 H N N 97 DA "H5'" H N N 98 DA "H5''" H N N 99 DA "H4'" H N N 100 DA "H3'" H N N 101 DA "HO3'" H N N 102 DA "H2'" H N N 103 DA "H2''" H N N 104 DA "H1'" H N N 105 DA H8 H N N 106 DA H61 H N N 107 DA H62 H N N 108 DA H2 H N N 109 DC OP3 O N N 110 DC P P N N 111 DC OP1 O N N 112 DC OP2 O N N 113 DC "O5'" O N N 114 DC "C5'" C N N 115 DC "C4'" C N R 116 DC "O4'" O N N 117 DC "C3'" C N S 118 DC "O3'" O N N 119 DC "C2'" C N N 120 DC "C1'" C N R 121 DC N1 N N N 122 DC C2 C N N 123 DC O2 O N N 124 DC N3 N N N 125 DC C4 C N N 126 DC N4 N N N 127 DC C5 C N N 128 DC C6 C N N 129 DC HOP3 H N N 130 DC HOP2 H N N 131 DC "H5'" H N N 132 DC "H5''" H N N 133 DC "H4'" H N N 134 DC "H3'" H N N 135 DC "HO3'" H N N 136 DC "H2'" H N N 137 DC "H2''" H N N 138 DC "H1'" H N N 139 DC H41 H N N 140 DC H42 H N N 141 DC H5 H N N 142 DC H6 H N N 143 DG OP3 O N N 144 DG P P N N 145 DG OP1 O N N 146 DG OP2 O N N 147 DG "O5'" O N N 148 DG "C5'" C N N 149 DG "C4'" C N R 150 DG "O4'" O N N 151 DG "C3'" C N S 152 DG "O3'" O N N 153 DG "C2'" C N N 154 DG "C1'" C N R 155 DG N9 N Y N 156 DG C8 C Y N 157 DG N7 N Y N 158 DG C5 C Y N 159 DG C6 C N N 160 DG O6 O N N 161 DG N1 N N N 162 DG C2 C N N 163 DG N2 N N N 164 DG N3 N N N 165 DG C4 C Y N 166 DG HOP3 H N N 167 DG HOP2 H N N 168 DG "H5'" H N N 169 DG "H5''" H N N 170 DG "H4'" H N N 171 DG "H3'" H N N 172 DG "HO3'" H N N 173 DG "H2'" H N N 174 DG "H2''" H N N 175 DG "H1'" H N N 176 DG H8 H N N 177 DG H1 H N N 178 DG H21 H N N 179 DG H22 H N N 180 DT OP3 O N N 181 DT P P N N 182 DT OP1 O N N 183 DT OP2 O N N 184 DT "O5'" O N N 185 DT "C5'" C N N 186 DT "C4'" C N R 187 DT "O4'" O N N 188 DT "C3'" C N S 189 DT "O3'" O N N 190 DT "C2'" C N N 191 DT "C1'" C N R 192 DT N1 N N N 193 DT C2 C N N 194 DT O2 O N N 195 DT N3 N N N 196 DT C4 C N N 197 DT O4 O N N 198 DT C5 C N N 199 DT C7 C N N 200 DT C6 C N N 201 DT HOP3 H N N 202 DT HOP2 H N N 203 DT "H5'" H N N 204 DT "H5''" H N N 205 DT "H4'" H N N 206 DT "H3'" H N N 207 DT "HO3'" H N N 208 DT "H2'" H N N 209 DT "H2''" H N N 210 DT "H1'" H N N 211 DT H3 H N N 212 DT H71 H N N 213 DT H72 H N N 214 DT H73 H N N 215 DT H6 H N N 216 GLN N N N N 217 GLN CA C N S 218 GLN C C N N 219 GLN O O N N 220 GLN CB C N N 221 GLN CG C N N 222 GLN CD C N N 223 GLN OE1 O N N 224 GLN NE2 N N N 225 GLN OXT O N N 226 GLN H H N N 227 GLN H2 H N N 228 GLN HA H N N 229 GLN HB2 H N N 230 GLN HB3 H N N 231 GLN HG2 H N N 232 GLN HG3 H N N 233 GLN HE21 H N N 234 GLN HE22 H N N 235 GLN HXT H N N 236 GLU N N N N 237 GLU CA C N S 238 GLU C C N N 239 GLU O O N N 240 GLU CB C N N 241 GLU CG C N N 242 GLU CD C N N 243 GLU OE1 O N N 244 GLU OE2 O N N 245 GLU OXT O N N 246 GLU H H N N 247 GLU H2 H N N 248 GLU HA H N N 249 GLU HB2 H N N 250 GLU HB3 H N N 251 GLU HG2 H N N 252 GLU HG3 H N N 253 GLU HE2 H N N 254 GLU HXT H N N 255 GLY N N N N 256 GLY CA C N N 257 GLY C C N N 258 GLY O O N N 259 GLY OXT O N N 260 GLY H H N N 261 GLY H2 H N N 262 GLY HA2 H N N 263 GLY HA3 H N N 264 GLY HXT H N N 265 HOH O O N N 266 HOH H1 H N N 267 HOH H2 H N N 268 ILE N N N N 269 ILE CA C N S 270 ILE C C N N 271 ILE O O N N 272 ILE CB C N S 273 ILE CG1 C N N 274 ILE CG2 C N N 275 ILE CD1 C N N 276 ILE OXT O N N 277 ILE H H N N 278 ILE H2 H N N 279 ILE HA H N N 280 ILE HB H N N 281 ILE HG12 H N N 282 ILE HG13 H N N 283 ILE HG21 H N N 284 ILE HG22 H N N 285 ILE HG23 H N N 286 ILE HD11 H N N 287 ILE HD12 H N N 288 ILE HD13 H N N 289 ILE HXT H N N 290 LEU N N N N 291 LEU CA C N S 292 LEU C C N N 293 LEU O O N N 294 LEU CB C N N 295 LEU CG C N N 296 LEU CD1 C N N 297 LEU CD2 C N N 298 LEU OXT O N N 299 LEU H H N N 300 LEU H2 H N N 301 LEU HA H N N 302 LEU HB2 H N N 303 LEU HB3 H N N 304 LEU HG H N N 305 LEU HD11 H N N 306 LEU HD12 H N N 307 LEU HD13 H N N 308 LEU HD21 H N N 309 LEU HD22 H N N 310 LEU HD23 H N N 311 LEU HXT H N N 312 LYS N N N N 313 LYS CA C N S 314 LYS C C N N 315 LYS O O N N 316 LYS CB C N N 317 LYS CG C N N 318 LYS CD C N N 319 LYS CE C N N 320 LYS NZ N N N 321 LYS OXT O N N 322 LYS H H N N 323 LYS H2 H N N 324 LYS HA H N N 325 LYS HB2 H N N 326 LYS HB3 H N N 327 LYS HG2 H N N 328 LYS HG3 H N N 329 LYS HD2 H N N 330 LYS HD3 H N N 331 LYS HE2 H N N 332 LYS HE3 H N N 333 LYS HZ1 H N N 334 LYS HZ2 H N N 335 LYS HZ3 H N N 336 LYS HXT H N N 337 SER N N N N 338 SER CA C N S 339 SER C C N N 340 SER O O N N 341 SER CB C N N 342 SER OG O N N 343 SER OXT O N N 344 SER H H N N 345 SER H2 H N N 346 SER HA H N N 347 SER HB2 H N N 348 SER HB3 H N N 349 SER HG H N N 350 SER HXT H N N 351 THR N N N N 352 THR CA C N S 353 THR C C N N 354 THR O O N N 355 THR CB C N R 356 THR OG1 O N N 357 THR CG2 C N N 358 THR OXT O N N 359 THR H H N N 360 THR H2 H N N 361 THR HA H N N 362 THR HB H N N 363 THR HG1 H N N 364 THR HG21 H N N 365 THR HG22 H N N 366 THR HG23 H N N 367 THR HXT H N N 368 TYR N N N N 369 TYR CA C N S 370 TYR C C N N 371 TYR O O N N 372 TYR CB C N N 373 TYR CG C Y N 374 TYR CD1 C Y N 375 TYR CD2 C Y N 376 TYR CE1 C Y N 377 TYR CE2 C Y N 378 TYR CZ C Y N 379 TYR OH O N N 380 TYR OXT O N N 381 TYR H H N N 382 TYR H2 H N N 383 TYR HA H N N 384 TYR HB2 H N N 385 TYR HB3 H N N 386 TYR HD1 H N N 387 TYR HD2 H N N 388 TYR HE1 H N N 389 TYR HE2 H N N 390 TYR HH H N N 391 TYR HXT H N N 392 VAL N N N N 393 VAL CA C N S 394 VAL C C N N 395 VAL O O N N 396 VAL CB C N N 397 VAL CG1 C N N 398 VAL CG2 C N N 399 VAL OXT O N N 400 VAL H H N N 401 VAL H2 H N N 402 VAL HA H N N 403 VAL HB H N N 404 VAL HG11 H N N 405 VAL HG12 H N N 406 VAL HG13 H N N 407 VAL HG21 H N N 408 VAL HG22 H N N 409 VAL HG23 H N N 410 VAL HXT H N N 411 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DG OP3 P sing N N 143 DG OP3 HOP3 sing N N 144 DG P OP1 doub N N 145 DG P OP2 sing N N 146 DG P "O5'" sing N N 147 DG OP2 HOP2 sing N N 148 DG "O5'" "C5'" sing N N 149 DG "C5'" "C4'" sing N N 150 DG "C5'" "H5'" sing N N 151 DG "C5'" "H5''" sing N N 152 DG "C4'" "O4'" sing N N 153 DG "C4'" "C3'" sing N N 154 DG "C4'" "H4'" sing N N 155 DG "O4'" "C1'" sing N N 156 DG "C3'" "O3'" sing N N 157 DG "C3'" "C2'" sing N N 158 DG "C3'" "H3'" sing N N 159 DG "O3'" "HO3'" sing N N 160 DG "C2'" "C1'" sing N N 161 DG "C2'" "H2'" sing N N 162 DG "C2'" "H2''" sing N N 163 DG "C1'" N9 sing N N 164 DG "C1'" "H1'" sing N N 165 DG N9 C8 sing Y N 166 DG N9 C4 sing Y N 167 DG C8 N7 doub Y N 168 DG C8 H8 sing N N 169 DG N7 C5 sing Y N 170 DG C5 C6 sing N N 171 DG C5 C4 doub Y N 172 DG C6 O6 doub N N 173 DG C6 N1 sing N N 174 DG N1 C2 sing N N 175 DG N1 H1 sing N N 176 DG C2 N2 sing N N 177 DG C2 N3 doub N N 178 DG N2 H21 sing N N 179 DG N2 H22 sing N N 180 DG N3 C4 sing N N 181 DT OP3 P sing N N 182 DT OP3 HOP3 sing N N 183 DT P OP1 doub N N 184 DT P OP2 sing N N 185 DT P "O5'" sing N N 186 DT OP2 HOP2 sing N N 187 DT "O5'" "C5'" sing N N 188 DT "C5'" "C4'" sing N N 189 DT "C5'" "H5'" sing N N 190 DT "C5'" "H5''" sing N N 191 DT "C4'" "O4'" sing N N 192 DT "C4'" "C3'" sing N N 193 DT "C4'" "H4'" sing N N 194 DT "O4'" "C1'" sing N N 195 DT "C3'" "O3'" sing N N 196 DT "C3'" "C2'" sing N N 197 DT "C3'" "H3'" sing N N 198 DT "O3'" "HO3'" sing N N 199 DT "C2'" "C1'" sing N N 200 DT "C2'" "H2'" sing N N 201 DT "C2'" "H2''" sing N N 202 DT "C1'" N1 sing N N 203 DT "C1'" "H1'" sing N N 204 DT N1 C2 sing N N 205 DT N1 C6 sing N N 206 DT C2 O2 doub N N 207 DT C2 N3 sing N N 208 DT N3 C4 sing N N 209 DT N3 H3 sing N N 210 DT C4 O4 doub N N 211 DT C4 C5 sing N N 212 DT C5 C7 sing N N 213 DT C5 C6 doub N N 214 DT C7 H71 sing N N 215 DT C7 H72 sing N N 216 DT C7 H73 sing N N 217 DT C6 H6 sing N N 218 GLN N CA sing N N 219 GLN N H sing N N 220 GLN N H2 sing N N 221 GLN CA C sing N N 222 GLN CA CB sing N N 223 GLN CA HA sing N N 224 GLN C O doub N N 225 GLN C OXT sing N N 226 GLN CB CG sing N N 227 GLN CB HB2 sing N N 228 GLN CB HB3 sing N N 229 GLN CG CD sing N N 230 GLN CG HG2 sing N N 231 GLN CG HG3 sing N N 232 GLN CD OE1 doub N N 233 GLN CD NE2 sing N N 234 GLN NE2 HE21 sing N N 235 GLN NE2 HE22 sing N N 236 GLN OXT HXT sing N N 237 GLU N CA sing N N 238 GLU N H sing N N 239 GLU N H2 sing N N 240 GLU CA C sing N N 241 GLU CA CB sing N N 242 GLU CA HA sing N N 243 GLU C O doub N N 244 GLU C OXT sing N N 245 GLU CB CG sing N N 246 GLU CB HB2 sing N N 247 GLU CB HB3 sing N N 248 GLU CG CD sing N N 249 GLU CG HG2 sing N N 250 GLU CG HG3 sing N N 251 GLU CD OE1 doub N N 252 GLU CD OE2 sing N N 253 GLU OE2 HE2 sing N N 254 GLU OXT HXT sing N N 255 GLY N CA sing N N 256 GLY N H sing N N 257 GLY N H2 sing N N 258 GLY CA C sing N N 259 GLY CA HA2 sing N N 260 GLY CA HA3 sing N N 261 GLY C O doub N N 262 GLY C OXT sing N N 263 GLY OXT HXT sing N N 264 HOH O H1 sing N N 265 HOH O H2 sing N N 266 ILE N CA sing N N 267 ILE N H sing N N 268 ILE N H2 sing N N 269 ILE CA C sing N N 270 ILE CA CB sing N N 271 ILE CA HA sing N N 272 ILE C O doub N N 273 ILE C OXT sing N N 274 ILE CB CG1 sing N N 275 ILE CB CG2 sing N N 276 ILE CB HB sing N N 277 ILE CG1 CD1 sing N N 278 ILE CG1 HG12 sing N N 279 ILE CG1 HG13 sing N N 280 ILE CG2 HG21 sing N N 281 ILE CG2 HG22 sing N N 282 ILE CG2 HG23 sing N N 283 ILE CD1 HD11 sing N N 284 ILE CD1 HD12 sing N N 285 ILE CD1 HD13 sing N N 286 ILE OXT HXT sing N N 287 LEU N CA sing N N 288 LEU N H sing N N 289 LEU N H2 sing N N 290 LEU CA C sing N N 291 LEU CA CB sing N N 292 LEU CA HA sing N N 293 LEU C O doub N N 294 LEU C OXT sing N N 295 LEU CB CG sing N N 296 LEU CB HB2 sing N N 297 LEU CB HB3 sing N N 298 LEU CG CD1 sing N N 299 LEU CG CD2 sing N N 300 LEU CG HG sing N N 301 LEU CD1 HD11 sing N N 302 LEU CD1 HD12 sing N N 303 LEU CD1 HD13 sing N N 304 LEU CD2 HD21 sing N N 305 LEU CD2 HD22 sing N N 306 LEU CD2 HD23 sing N N 307 LEU OXT HXT sing N N 308 LYS N CA sing N N 309 LYS N H sing N N 310 LYS N H2 sing N N 311 LYS CA C sing N N 312 LYS CA CB sing N N 313 LYS CA HA sing N N 314 LYS C O doub N N 315 LYS C OXT sing N N 316 LYS CB CG sing N N 317 LYS CB HB2 sing N N 318 LYS CB HB3 sing N N 319 LYS CG CD sing N N 320 LYS CG HG2 sing N N 321 LYS CG HG3 sing N N 322 LYS CD CE sing N N 323 LYS CD HD2 sing N N 324 LYS CD HD3 sing N N 325 LYS CE NZ sing N N 326 LYS CE HE2 sing N N 327 LYS CE HE3 sing N N 328 LYS NZ HZ1 sing N N 329 LYS NZ HZ2 sing N N 330 LYS NZ HZ3 sing N N 331 LYS OXT HXT sing N N 332 SER N CA sing N N 333 SER N H sing N N 334 SER N H2 sing N N 335 SER CA C sing N N 336 SER CA CB sing N N 337 SER CA HA sing N N 338 SER C O doub N N 339 SER C OXT sing N N 340 SER CB OG sing N N 341 SER CB HB2 sing N N 342 SER CB HB3 sing N N 343 SER OG HG sing N N 344 SER OXT HXT sing N N 345 THR N CA sing N N 346 THR N H sing N N 347 THR N H2 sing N N 348 THR CA C sing N N 349 THR CA CB sing N N 350 THR CA HA sing N N 351 THR C O doub N N 352 THR C OXT sing N N 353 THR CB OG1 sing N N 354 THR CB CG2 sing N N 355 THR CB HB sing N N 356 THR OG1 HG1 sing N N 357 THR CG2 HG21 sing N N 358 THR CG2 HG22 sing N N 359 THR CG2 HG23 sing N N 360 THR OXT HXT sing N N 361 TYR N CA sing N N 362 TYR N H sing N N 363 TYR N H2 sing N N 364 TYR CA C sing N N 365 TYR CA CB sing N N 366 TYR CA HA sing N N 367 TYR C O doub N N 368 TYR C OXT sing N N 369 TYR CB CG sing N N 370 TYR CB HB2 sing N N 371 TYR CB HB3 sing N N 372 TYR CG CD1 doub Y N 373 TYR CG CD2 sing Y N 374 TYR CD1 CE1 sing Y N 375 TYR CD1 HD1 sing N N 376 TYR CD2 CE2 doub Y N 377 TYR CD2 HD2 sing N N 378 TYR CE1 CZ doub Y N 379 TYR CE1 HE1 sing N N 380 TYR CE2 CZ sing Y N 381 TYR CE2 HE2 sing N N 382 TYR CZ OH sing N N 383 TYR OH HH sing N N 384 TYR OXT HXT sing N N 385 VAL N CA sing N N 386 VAL N H sing N N 387 VAL N H2 sing N N 388 VAL CA C sing N N 389 VAL CA CB sing N N 390 VAL CA HA sing N N 391 VAL C O doub N N 392 VAL C OXT sing N N 393 VAL CB CG1 sing N N 394 VAL CB CG2 sing N N 395 VAL CB HB sing N N 396 VAL CG1 HG11 sing N N 397 VAL CG1 HG12 sing N N 398 VAL CG1 HG13 sing N N 399 VAL CG2 HG21 sing N N 400 VAL CG2 HG22 sing N N 401 VAL CG2 HG23 sing N N 402 VAL OXT HXT sing N N 403 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1NWQ 'double helix' 1NWQ 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DT 2 1_555 B DA 21 1_555 -1.043 0.272 -0.427 1.162 -17.569 9.020 1 B_DT-9:DA9_D B -9 ? D 9 ? ? ? 1 A DC 3 1_555 B DG 20 1_555 0.109 -0.021 -0.875 13.804 -27.933 5.202 2 B_DC-8:DG8_D B -8 ? D 8 ? 19 1 1 A DC 4 1_555 B DG 19 1_555 0.302 -0.528 -1.291 10.886 -20.414 5.484 3 B_DC-7:DG7_D B -7 ? D 7 ? 19 1 1 A DT 5 1_555 B DA 18 1_555 -0.672 -0.041 -0.589 9.056 -8.757 -3.724 4 B_DT-6:DA6_D B -6 ? D 6 ? 20 1 1 A DA 6 1_555 B DT 17 1_555 0.203 -0.026 -0.380 -8.387 -6.646 0.869 5 B_DA-5:DT5_D B -5 ? D 5 ? 20 1 1 A DT 7 1_555 B DA 16 1_555 -0.647 -0.079 -0.109 -4.479 -13.811 -10.778 6 B_DT-4:DA4_D B -4 ? D 4 ? 20 1 1 A DT 8 1_555 B DA 15 1_555 -0.261 0.106 0.210 -0.183 -7.261 2.856 7 B_DT-3:DA3_D B -3 ? D 3 ? 20 1 1 A DG 9 1_555 B DC 14 1_555 0.023 -0.131 0.348 7.918 -4.354 -5.008 8 B_DG-2:DC2_D B -2 ? D 2 ? 19 1 1 A DC 10 1_555 B DG 13 1_555 0.035 -0.140 0.009 -2.901 -1.495 -4.266 9 B_DC-1:DG1_D B -1 ? D 1 ? 19 1 1 A DG 11 1_555 B DC 12 1_555 0.210 -0.227 -0.622 -10.050 0.042 -7.990 10 B_DG1:DC-1_D B 1 ? D -1 ? 19 1 1 A DC 12 1_555 B DG 11 1_555 -0.469 0.032 0.278 -10.448 0.176 -4.354 11 B_DC2:DG-2_D B 2 ? D -2 ? 19 1 1 A DA 13 1_555 B DT 10 1_555 0.316 -0.174 0.159 -1.343 -5.410 3.593 12 B_DA3:DT-3_D B 3 ? D -3 ? 20 1 1 A DA 14 1_555 B DT 9 1_555 0.101 -0.152 0.211 0.634 -8.547 3.018 13 B_DA4:DT-4_D B 4 ? D -4 ? 20 1 1 A DT 15 1_555 B DA 8 1_555 -0.103 -0.375 -0.088 4.375 -10.841 4.901 14 B_DT5:DA-5_D B 5 ? D -5 ? 20 1 1 A DC 16 1_555 B DG 7 1_555 -0.574 -0.303 -0.095 -8.259 -8.233 -3.710 15 B_DC6:DG-6_D B 6 ? D -6 ? 19 1 1 A DC 17 1_555 B DG 6 1_555 0.522 -0.466 -0.360 -15.527 -7.854 -1.863 16 B_DC7:DG-7_D B 7 ? D -7 ? 19 1 1 A DA 18 1_555 B DT 5 1_555 0.191 -0.384 0.752 6.786 -12.673 13.361 17 B_DA8:DT-8_D B 8 ? D -8 ? 20 1 1 A DG 19 1_555 B DC 4 1_555 -0.180 0.168 -0.275 -5.865 -21.226 5.594 18 B_DG9:DC-9_D B 9 ? D -9 ? 19 1 1 A DT 20 1_555 B DA 3 1_555 0.291 -0.246 -0.247 -11.556 -26.432 -2.937 19 B_DT10:DA-10_D B 10 ? D -10 ? 20 1 1 A DT 21 1_555 B DA 2 1_555 -1.166 0.398 -0.482 -19.728 -15.366 -6.852 20 B_DT11:DA-11_D B 11 ? D -11 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DT 2 1_555 B DA 21 1_555 A DC 3 1_555 B DG 20 1_555 0.174 1.025 2.935 5.593 2.799 44.060 1.119 0.240 2.990 3.708 -7.411 44.479 1 BB_DT-9DC-8:DG8DA9_DD B -9 ? D 9 ? B -8 ? D 8 ? 1 A DC 3 1_555 B DG 20 1_555 A DC 4 1_555 B DG 19 1_555 -0.116 0.844 3.239 2.071 10.700 31.768 -0.352 0.552 3.328 18.866 -3.652 33.540 2 BB_DC-8DC-7:DG7DG8_DD B -8 ? D 8 ? B -7 ? D 7 ? 1 A DC 4 1_555 B DG 19 1_555 A DT 5 1_555 B DA 18 1_555 -0.533 -0.451 3.575 -8.358 7.644 26.837 -2.744 -0.956 3.338 15.615 17.074 29.089 3 BB_DC-7DT-6:DA6DG7_DD B -7 ? D 7 ? B -6 ? D 6 ? 1 A DT 5 1_555 B DA 18 1_555 A DA 6 1_555 B DT 17 1_555 0.399 -0.033 3.694 -0.268 0.262 47.465 -0.064 -0.521 3.691 0.325 0.333 47.466 4 BB_DT-6DA-5:DT5DA6_DD B -6 ? D 6 ? B -5 ? D 5 ? 1 A DA 6 1_555 B DT 17 1_555 A DT 7 1_555 B DA 16 1_555 -0.838 -0.948 3.112 -1.269 2.900 23.348 -3.237 1.653 3.014 7.123 3.117 23.559 5 BB_DA-5DT-4:DA4DT5_DD B -5 ? D 5 ? B -4 ? D 4 ? 1 A DT 7 1_555 B DA 16 1_555 A DT 8 1_555 B DA 15 1_555 0.758 -0.452 3.128 -1.575 -0.066 36.634 -0.710 -1.411 3.094 -0.106 2.505 36.667 6 BB_DT-4DT-3:DA3DA4_DD B -4 ? D 4 ? B -3 ? D 3 ? 1 A DT 8 1_555 B DA 15 1_555 A DG 9 1_555 B DC 14 1_555 -0.292 0.023 3.193 -0.493 1.021 33.669 -0.122 0.425 3.196 1.762 0.851 33.687 7 BB_DT-3DG-2:DC2DA3_DD B -3 ? D 3 ? B -2 ? D 2 ? 1 A DG 9 1_555 B DC 14 1_555 A DC 10 1_555 B DG 13 1_555 0.594 -1.236 3.542 4.074 6.510 32.679 -3.273 -0.321 3.290 11.375 -7.118 33.545 8 BB_DG-2DC-1:DG1DC2_DD B -2 ? D 2 ? B -1 ? D 1 ? 1 A DC 10 1_555 B DG 13 1_555 A DG 11 1_555 B DC 12 1_555 -0.335 -0.049 3.527 1.397 14.509 34.895 -2.098 0.712 3.240 22.994 -2.214 37.730 9 BB_DC-1DG1:DC-1DG1_DD B -1 ? D 1 ? B 1 ? D -1 ? 1 A DG 11 1_555 B DC 12 1_555 A DC 12 1_555 B DG 11 1_555 -0.764 -0.997 3.306 -9.091 2.890 27.629 -2.628 -0.530 3.268 5.836 18.357 29.199 10 BB_DG1DC2:DG-2DC-1_DD B 1 ? D -1 ? B 2 ? D -2 ? 1 A DC 12 1_555 B DG 11 1_555 A DA 13 1_555 B DT 10 1_555 0.654 0.358 3.138 2.553 3.547 40.417 0.134 -0.667 3.191 5.115 -3.682 40.642 11 BB_DC2DA3:DT-3DG-2_DD B 2 ? D -2 ? B 3 ? D -3 ? 1 A DA 13 1_555 B DT 10 1_555 A DA 14 1_555 B DT 9 1_555 -0.313 -0.160 3.203 -2.222 -3.432 32.035 0.313 0.175 3.216 -6.188 4.006 32.288 12 BB_DA3DA4:DT-4DT-3_DD B 3 ? D -3 ? B 4 ? D -4 ? 1 A DA 14 1_555 B DT 9 1_555 A DT 15 1_555 B DA 8 1_555 0.556 -0.829 3.109 4.207 -1.900 31.500 -1.176 -0.270 3.198 -3.476 -7.697 31.828 13 BB_DA4DT5:DA-5DT-4_DD B 4 ? D -4 ? B 5 ? D -5 ? 1 A DT 15 1_555 B DA 8 1_555 A DC 16 1_555 B DG 7 1_555 0.213 -0.497 3.454 1.903 3.111 35.052 -1.307 -0.056 3.405 5.148 -3.149 35.235 14 BB_DT5DC6:DG-6DA-5_DD B 5 ? D -5 ? B 6 ? D -6 ? 1 A DC 16 1_555 B DG 7 1_555 A DC 17 1_555 B DG 6 1_555 0.659 -0.006 3.455 3.580 15.592 42.107 -1.517 -0.516 3.297 20.822 -4.780 44.914 15 BB_DC6DC7:DG-7DG-6_DD B 6 ? D -6 ? B 7 ? D -7 ? 1 A DC 17 1_555 B DG 6 1_555 A DA 18 1_555 B DT 5 1_555 0.263 0.679 2.746 -7.766 3.827 27.680 0.645 -1.972 2.645 7.763 15.752 28.977 16 BB_DC7DA8:DT-8DG-7_DD B 7 ? D -7 ? B 8 ? D -8 ? 1 A DA 18 1_555 B DT 5 1_555 A DG 19 1_555 B DC 4 1_555 -0.295 0.288 3.606 7.521 2.330 33.930 0.092 1.749 3.475 3.928 -12.677 34.806 17 BB_DA8DG9:DC-9DT-8_DD B 8 ? D -8 ? B 9 ? D -9 ? 1 A DG 19 1_555 B DC 4 1_555 A DT 20 1_555 B DA 3 1_555 -0.792 -1.468 3.426 -1.547 3.218 37.246 -2.726 1.024 3.321 5.024 2.415 37.411 18 BB_DG9DT10:DA-10DC-9_DD B 9 ? D -9 ? B 10 ? D -10 ? 1 A DT 20 1_555 B DA 3 1_555 A DT 21 1_555 B DA 2 1_555 0.033 0.069 3.447 1.437 -1.533 26.910 0.559 0.315 3.435 -3.287 -3.082 26.990 19 BB_DT10DT11:DA-11DA-10_DD B 10 ? D -10 ? B 11 ? D -11 ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1DH3 _pdbx_initial_refinement_model.details 'PDB ENTRY 1DH3' #