data_1NYD # _entry.id 1NYD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1NYD pdb_00001nyd 10.2210/pdb1nyd/pdb RCSB RCSB018348 ? ? WWPDB D_1000018348 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1NYD _pdbx_database_status.recvd_initial_deposition_date 2003-02-12 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Webba da Silva, M.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Association of DNA quadruplexes through G:C:G:C tetrads. Solution structure of d(GCGGTGGAT).' _citation.journal_abbrev Biochemistry _citation.journal_volume 42 _citation.page_first 14356 _citation.page_last 14365 _citation.year 2003 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 14661946 _citation.pdbx_database_id_DOI 10.1021/bi0355185 # _citation_author.citation_id primary _citation_author.name 'Webba da Silva, M.' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 1NYD _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1NYD _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description "5'-D(*GP*CP*GP*GP*TP*GP*GP*AP*T)-3'" _entity.formula_weight 2811.846 _entity.pdbx_number_of_molecules 4 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DG)(DC)(DG)(DG)(DT)(DG)(DG)(DA)(DT)' _entity_poly.pdbx_seq_one_letter_code_can GCGGTGGAT _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DC n 1 3 DG n 1 4 DG n 1 5 DT n 1 6 DG n 1 7 DG n 1 8 DA n 1 9 DT n # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1NYD _struct_ref.pdbx_db_accession 1NYD _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1NYD A 1 ? 9 ? 1NYD 1 ? 9 ? 1 9 2 1 1NYD B 1 ? 9 ? 1NYD 1 ? 9 ? 1 9 3 1 1NYD C 1 ? 9 ? 1NYD 1 ? 9 ? 1 9 4 1 1NYD D 1 ? 9 ? 1NYD 1 ? 9 ? 1 9 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 '2D NOESY' 2 1 1 '2D TOCSY' 3 1 1 DQF-COSY 4 1 1 '(1H,13C)HSQC' 5 2 2 '(1H,15N)HSQC' 6 2 2 JR-HMBC # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.temperature_units 1 293 1 6.6 '100 mM NaCl' atm K 2 273 1 6.6 '100 mM NaCl' atm K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system 1 '4 mM sample in 100 mM NaCl, 2 mM phosphate' '99.9% D2O' 2 '4 mM sample in 100 mM NaCl, 2 mM phosphate' '90% H2O/10% D2O' # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.field_strength 1 ? Varian UNITY 400 2 ? Varian INOVA 500 3 ? Varian INOVA 600 # _pdbx_nmr_refine.entry_id 1NYD _pdbx_nmr_refine.method 'distance geometry, simulated annealing, molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 1NYD _pdbx_nmr_details.text ;Structure determined using homo- and heteronuclear techniques with explicit correlations between exchangeable and non-exchangeable signals. ; # _pdbx_nmr_ensemble.entry_id 1NYD _pdbx_nmr_ensemble.conformers_calculated_total_number ? _pdbx_nmr_ensemble.conformers_submitted_total_number 1 _pdbx_nmr_ensemble.conformer_selection_criteria ? # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal Felix 1998 processing MSI 1 X-PLOR 3.1 refinement Brunger 2 'Insight II' 2000 'data analysis' Accelrys 3 # _exptl.entry_id 1NYD _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1NYD _struct.title 'Solution structure of DNA quadruplex GCGGTGGAT' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1NYD _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'quadruplex, parallel quadruplex, molecular propeller topology, double chain reversal, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 C DC 2 N3 ? ? A DG 1 C DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 C DC 2 O2 ? ? A DG 1 C DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 C DC 2 N4 ? ? A DG 1 C DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 1 O6 ? ? ? 1_555 D DC 2 N4 ? ? A DG 1 D DC 2 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog5 hydrog ? ? A DC 2 N3 ? ? ? 1_555 C DG 1 N1 ? ? A DC 2 C DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 N4 ? ? ? 1_555 C DG 1 O6 ? ? A DC 2 C DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 2 O2 ? ? ? 1_555 C DG 1 N2 ? ? A DC 2 C DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 2 N4 ? ? ? 1_555 D DG 1 O6 ? ? A DC 2 D DG 1 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog9 hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DG 6 O6 ? ? A DG 3 A DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog10 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DG 6 N7 ? ? A DG 3 A DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog11 hydrog ? ? A DG 3 N7 ? ? ? 1_555 B DG 6 N2 ? ? A DG 3 B DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog12 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DG 6 N1 ? ? A DG 3 B DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog13 hydrog ? ? A DG 4 N1 ? ? ? 1_555 A DG 7 O6 ? ? A DG 4 A DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog14 hydrog ? ? A DG 4 N2 ? ? ? 1_555 A DG 7 N7 ? ? A DG 4 A DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog15 hydrog ? ? A DG 4 N7 ? ? ? 1_555 B DG 7 N2 ? ? A DG 4 B DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog16 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DG 7 N1 ? ? A DG 4 B DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DG 3 O6 ? ? A DG 6 B DG 3 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DG 3 N7 ? ? A DG 6 B DG 3 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? A DG 7 N1 ? ? ? 1_555 B DG 4 O6 ? ? A DG 7 B DG 4 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? A DG 7 N2 ? ? ? 1_555 B DG 4 N7 ? ? A DG 7 B DG 4 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog21 hydrog ? ? A DA 8 N1 ? ? ? 1_555 B DA 8 N6 ? ? A DA 8 B DA 8 1_555 ? ? ? ? ? ? TYPE_1_PAIR ? ? ? hydrog22 hydrog ? ? A DA 8 N6 ? ? ? 1_555 B DA 8 N1 ? ? A DA 8 B DA 8 1_555 ? ? ? ? ? ? TYPE_1_PAIR ? ? ? hydrog23 hydrog ? ? B DG 1 O6 ? ? ? 1_555 C DC 2 N4 ? ? B DG 1 C DC 2 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog24 hydrog ? ? B DG 1 N1 ? ? ? 1_555 D DC 2 N3 ? ? B DG 1 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DG 1 N2 ? ? ? 1_555 D DC 2 O2 ? ? B DG 1 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DG 1 O6 ? ? ? 1_555 D DC 2 N4 ? ? B DG 1 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DC 2 N4 ? ? ? 1_555 C DG 1 O6 ? ? B DC 2 C DG 1 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog28 hydrog ? ? B DC 2 N3 ? ? ? 1_555 D DG 1 N1 ? ? B DC 2 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DC 2 N4 ? ? ? 1_555 D DG 1 O6 ? ? B DC 2 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DC 2 O2 ? ? ? 1_555 D DG 1 N2 ? ? B DC 2 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DG 3 N1 ? ? ? 1_555 B DG 6 O6 ? ? B DG 3 B DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog32 hydrog ? ? B DG 3 N2 ? ? ? 1_555 B DG 6 N7 ? ? B DG 3 B DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog33 hydrog ? ? B DG 4 N1 ? ? ? 1_555 B DG 7 O6 ? ? B DG 4 B DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog34 hydrog ? ? B DG 4 N2 ? ? ? 1_555 B DG 7 N7 ? ? B DG 4 B DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog35 hydrog ? ? C DG 3 N1 ? ? ? 1_555 C DG 6 O6 ? ? C DG 3 C DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog36 hydrog ? ? C DG 3 N2 ? ? ? 1_555 C DG 6 N7 ? ? C DG 3 C DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog37 hydrog ? ? C DG 3 N7 ? ? ? 1_555 D DG 6 N2 ? ? C DG 3 D DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog38 hydrog ? ? C DG 3 O6 ? ? ? 1_555 D DG 6 N1 ? ? C DG 3 D DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog39 hydrog ? ? C DG 4 N1 ? ? ? 1_555 C DG 7 O6 ? ? C DG 4 C DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog40 hydrog ? ? C DG 4 N2 ? ? ? 1_555 C DG 7 N7 ? ? C DG 4 C DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog41 hydrog ? ? C DG 4 N7 ? ? ? 1_555 D DG 7 N2 ? ? C DG 4 D DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog42 hydrog ? ? C DG 4 O6 ? ? ? 1_555 D DG 7 N1 ? ? C DG 4 D DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog43 hydrog ? ? C DG 6 N1 ? ? ? 1_555 D DG 3 O6 ? ? C DG 6 D DG 3 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog44 hydrog ? ? C DG 6 N2 ? ? ? 1_555 D DG 3 N7 ? ? C DG 6 D DG 3 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog45 hydrog ? ? C DG 7 N1 ? ? ? 1_555 D DG 4 O6 ? ? C DG 7 D DG 4 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog46 hydrog ? ? C DG 7 N2 ? ? ? 1_555 D DG 4 N7 ? ? C DG 7 D DG 4 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog47 hydrog ? ? C DA 8 N1 ? ? ? 1_555 D DA 8 N6 ? ? C DA 8 D DA 8 1_555 ? ? ? ? ? ? TYPE_1_PAIR ? ? ? hydrog48 hydrog ? ? C DA 8 N6 ? ? ? 1_555 D DA 8 N1 ? ? C DA 8 D DA 8 1_555 ? ? ? ? ? ? TYPE_1_PAIR ? ? ? hydrog49 hydrog ? ? D DG 3 N1 ? ? ? 1_555 D DG 6 O6 ? ? D DG 3 D DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog50 hydrog ? ? D DG 3 N2 ? ? ? 1_555 D DG 6 N7 ? ? D DG 3 D DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog51 hydrog ? ? D DG 4 N1 ? ? ? 1_555 D DG 7 O6 ? ? D DG 4 D DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog52 hydrog ? ? D DG 4 N2 ? ? ? 1_555 D DG 7 N7 ? ? D DG 4 D DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 1NYD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1NYD _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG G A . n A 1 2 DC 2 2 2 DC C A . n A 1 3 DG 3 3 3 DG G A . n A 1 4 DG 4 4 4 DG G A . n A 1 5 DT 5 5 5 DT T A . n A 1 6 DG 6 6 6 DG G A . n A 1 7 DG 7 7 7 DG G A . n A 1 8 DA 8 8 8 DA A A . n A 1 9 DT 9 9 9 DT T A . n B 1 1 DG 1 1 1 DG G B . n B 1 2 DC 2 2 2 DC C B . n B 1 3 DG 3 3 3 DG G B . n B 1 4 DG 4 4 4 DG G B . n B 1 5 DT 5 5 5 DT T B . n B 1 6 DG 6 6 6 DG G B . n B 1 7 DG 7 7 7 DG G B . n B 1 8 DA 8 8 8 DA A B . n B 1 9 DT 9 9 9 DT T B . n C 1 1 DG 1 1 1 DG G C . n C 1 2 DC 2 2 2 DC C C . n C 1 3 DG 3 3 3 DG G C . n C 1 4 DG 4 4 4 DG G C . n C 1 5 DT 5 5 5 DT T C . n C 1 6 DG 6 6 6 DG G C . n C 1 7 DG 7 7 7 DG G C . n C 1 8 DA 8 8 8 DA A C . n C 1 9 DT 9 9 9 DT T C . n D 1 1 DG 1 1 1 DG G D . n D 1 2 DC 2 2 2 DC C D . n D 1 3 DG 3 3 3 DG G D . n D 1 4 DG 4 4 4 DG G D . n D 1 5 DT 5 5 5 DT T D . n D 1 6 DG 6 6 6 DG G D . n D 1 7 DG 7 7 7 DG G D . n D 1 8 DA 8 8 8 DA A D . n D 1 9 DT 9 9 9 DT T D . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-02-24 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-02-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C5 B DT 5 ? ? C7 B DT 5 ? ? 1.532 1.496 0.036 0.006 N 2 1 C6 D DG 4 ? ? N1 D DG 4 ? ? 1.349 1.391 -0.042 0.007 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N9 A DG 1 ? ? "C1'" A DG 1 ? ? "C2'" A DG 1 ? ? 122.95 114.30 8.65 1.40 N 2 1 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 114.76 108.30 6.46 0.30 N 3 1 "C4'" A DC 2 ? ? "C3'" A DC 2 ? ? "C2'" A DC 2 ? ? 97.56 102.20 -4.64 0.70 N 4 1 N1 A DC 2 ? ? "C1'" A DC 2 ? ? "C2'" A DC 2 ? ? 125.71 114.30 11.41 1.40 N 5 1 N1 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 123.12 118.90 4.22 0.60 N 6 1 "C3'" A DC 2 ? ? "O3'" A DC 2 ? ? P A DG 3 ? ? 131.33 119.70 11.63 1.20 Y 7 1 "C4'" A DG 3 ? ? "C3'" A DG 3 ? ? "C2'" A DG 3 ? ? 97.08 102.20 -5.12 0.70 N 8 1 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 117.47 108.30 9.17 0.30 N 9 1 "C3'" A DG 4 ? ? "C2'" A DG 4 ? ? "C1'" A DG 4 ? ? 96.77 102.40 -5.63 0.80 N 10 1 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 110.49 108.30 2.19 0.30 N 11 1 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? "C2'" A DT 5 ? ? 97.24 105.90 -8.66 0.80 N 12 1 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 113.50 108.30 5.20 0.30 N 13 1 "C4'" A DG 6 ? ? "C3'" A DG 6 ? ? "C2'" A DG 6 ? ? 96.34 102.20 -5.86 0.70 N 14 1 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? "C2'" A DG 6 ? ? 97.29 105.90 -8.61 0.80 N 15 1 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 112.58 108.30 4.28 0.30 N 16 1 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? "C2'" A DG 7 ? ? 100.56 105.90 -5.34 0.80 N 17 1 "C3'" A DG 7 ? ? "O3'" A DG 7 ? ? P A DA 8 ? ? 129.03 119.70 9.33 1.20 Y 18 1 "C4'" A DA 8 ? ? "C3'" A DA 8 ? ? "C2'" A DA 8 ? ? 97.75 102.20 -4.45 0.70 N 19 1 "C3'" A DA 8 ? ? "C2'" A DA 8 ? ? "C1'" A DA 8 ? ? 97.50 102.40 -4.90 0.80 N 20 1 "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 111.66 108.30 3.36 0.30 N 21 1 "O4'" A DT 9 ? ? "C4'" A DT 9 ? ? "C3'" A DT 9 ? ? 102.07 104.50 -2.43 0.40 N 22 1 "C4'" A DT 9 ? ? "C3'" A DT 9 ? ? "C2'" A DT 9 ? ? 97.68 102.20 -4.52 0.70 N 23 1 "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 110.39 108.30 2.09 0.30 N 24 1 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 117.41 122.90 -5.49 0.60 N 25 1 N9 B DG 1 ? ? "C1'" B DG 1 ? ? "C2'" B DG 1 ? ? 122.90 114.30 8.60 1.40 N 26 1 "O4'" B DG 1 ? ? "C1'" B DG 1 ? ? N9 B DG 1 ? ? 114.77 108.30 6.47 0.30 N 27 1 "C4'" B DC 2 ? ? "C3'" B DC 2 ? ? "C2'" B DC 2 ? ? 97.48 102.20 -4.72 0.70 N 28 1 N1 B DC 2 ? ? "C1'" B DC 2 ? ? "C2'" B DC 2 ? ? 125.74 114.30 11.44 1.40 N 29 1 N1 B DC 2 ? ? C2 B DC 2 ? ? O2 B DC 2 ? ? 123.09 118.90 4.19 0.60 N 30 1 "C3'" B DC 2 ? ? "O3'" B DC 2 ? ? P B DG 3 ? ? 131.34 119.70 11.64 1.20 Y 31 1 "C4'" B DG 3 ? ? "C3'" B DG 3 ? ? "C2'" B DG 3 ? ? 97.25 102.20 -4.95 0.70 N 32 1 "O4'" B DG 3 ? ? "C1'" B DG 3 ? ? N9 B DG 3 ? ? 117.50 108.30 9.20 0.30 N 33 1 "C3'" B DG 4 ? ? "C2'" B DG 4 ? ? "C1'" B DG 4 ? ? 96.64 102.40 -5.76 0.80 N 34 1 "O4'" B DG 4 ? ? "C1'" B DG 4 ? ? N9 B DG 4 ? ? 110.40 108.30 2.10 0.30 N 35 1 "O4'" B DT 5 ? ? "C1'" B DT 5 ? ? "C2'" B DT 5 ? ? 97.26 105.90 -8.64 0.80 N 36 1 "O4'" B DT 5 ? ? "C1'" B DT 5 ? ? N1 B DT 5 ? ? 113.57 108.30 5.27 0.30 N 37 1 "C4'" B DG 6 ? ? "C3'" B DG 6 ? ? "C2'" B DG 6 ? ? 96.54 102.20 -5.66 0.70 N 38 1 "O4'" B DG 6 ? ? "C1'" B DG 6 ? ? "C2'" B DG 6 ? ? 97.34 105.90 -8.56 0.80 N 39 1 "O4'" B DG 6 ? ? "C1'" B DG 6 ? ? N9 B DG 6 ? ? 112.62 108.30 4.32 0.30 N 40 1 "O4'" B DG 7 ? ? "C1'" B DG 7 ? ? "C2'" B DG 7 ? ? 100.28 105.90 -5.62 0.80 N 41 1 "C3'" B DG 7 ? ? "O3'" B DG 7 ? ? P B DA 8 ? ? 129.04 119.70 9.34 1.20 Y 42 1 "C4'" B DA 8 ? ? "C3'" B DA 8 ? ? "C2'" B DA 8 ? ? 97.77 102.20 -4.43 0.70 N 43 1 "C3'" B DA 8 ? ? "C2'" B DA 8 ? ? "C1'" B DA 8 ? ? 97.47 102.40 -4.93 0.80 N 44 1 "O4'" B DA 8 ? ? "C1'" B DA 8 ? ? N9 B DA 8 ? ? 111.45 108.30 3.15 0.30 N 45 1 "O4'" B DT 9 ? ? "C4'" B DT 9 ? ? "C3'" B DT 9 ? ? 102.06 104.50 -2.44 0.40 N 46 1 "C4'" B DT 9 ? ? "C3'" B DT 9 ? ? "C2'" B DT 9 ? ? 97.96 102.20 -4.24 0.70 N 47 1 "O4'" B DT 9 ? ? "C1'" B DT 9 ? ? N1 B DT 9 ? ? 110.18 108.30 1.88 0.30 N 48 1 C6 B DT 9 ? ? C5 B DT 9 ? ? C7 B DT 9 ? ? 117.40 122.90 -5.50 0.60 N 49 1 N9 C DG 1 ? ? "C1'" C DG 1 ? ? "C2'" C DG 1 ? ? 122.93 114.30 8.63 1.40 N 50 1 "O4'" C DG 1 ? ? "C1'" C DG 1 ? ? N9 C DG 1 ? ? 114.80 108.30 6.50 0.30 N 51 1 "C4'" C DC 2 ? ? "C3'" C DC 2 ? ? "C2'" C DC 2 ? ? 97.51 102.20 -4.69 0.70 N 52 1 N1 C DC 2 ? ? "C1'" C DC 2 ? ? "C2'" C DC 2 ? ? 125.75 114.30 11.45 1.40 N 53 1 N1 C DC 2 ? ? C2 C DC 2 ? ? O2 C DC 2 ? ? 123.08 118.90 4.18 0.60 N 54 1 "C3'" C DC 2 ? ? "O3'" C DC 2 ? ? P C DG 3 ? ? 131.29 119.70 11.59 1.20 Y 55 1 "C4'" C DG 3 ? ? "C3'" C DG 3 ? ? "C2'" C DG 3 ? ? 97.24 102.20 -4.96 0.70 N 56 1 "O4'" C DG 3 ? ? "C1'" C DG 3 ? ? N9 C DG 3 ? ? 117.46 108.30 9.16 0.30 N 57 1 "C3'" C DG 4 ? ? "C2'" C DG 4 ? ? "C1'" C DG 4 ? ? 96.68 102.40 -5.72 0.80 N 58 1 "O4'" C DG 4 ? ? "C1'" C DG 4 ? ? N9 C DG 4 ? ? 110.41 108.30 2.11 0.30 N 59 1 "O4'" C DT 5 ? ? "C1'" C DT 5 ? ? "C2'" C DT 5 ? ? 97.22 105.90 -8.68 0.80 N 60 1 "O4'" C DT 5 ? ? "C1'" C DT 5 ? ? N1 C DT 5 ? ? 113.53 108.30 5.23 0.30 N 61 1 "C4'" C DG 6 ? ? "C3'" C DG 6 ? ? "C2'" C DG 6 ? ? 96.53 102.20 -5.67 0.70 N 62 1 "O4'" C DG 6 ? ? "C1'" C DG 6 ? ? "C2'" C DG 6 ? ? 97.39 105.90 -8.51 0.80 N 63 1 "O4'" C DG 6 ? ? "C1'" C DG 6 ? ? N9 C DG 6 ? ? 112.59 108.30 4.29 0.30 N 64 1 "O4'" C DG 7 ? ? "C1'" C DG 7 ? ? "C2'" C DG 7 ? ? 100.31 105.90 -5.59 0.80 N 65 1 "C3'" C DG 7 ? ? "O3'" C DG 7 ? ? P C DA 8 ? ? 129.07 119.70 9.37 1.20 Y 66 1 "C4'" C DA 8 ? ? "C3'" C DA 8 ? ? "C2'" C DA 8 ? ? 97.73 102.20 -4.47 0.70 N 67 1 "C3'" C DA 8 ? ? "C2'" C DA 8 ? ? "C1'" C DA 8 ? ? 97.50 102.40 -4.90 0.80 N 68 1 "O4'" C DA 8 ? ? "C1'" C DA 8 ? ? N9 C DA 8 ? ? 111.43 108.30 3.13 0.30 N 69 1 "O4'" C DT 9 ? ? "C4'" C DT 9 ? ? "C3'" C DT 9 ? ? 102.05 104.50 -2.45 0.40 N 70 1 "C4'" C DT 9 ? ? "C3'" C DT 9 ? ? "C2'" C DT 9 ? ? 97.92 102.20 -4.28 0.70 N 71 1 "O4'" C DT 9 ? ? "C1'" C DT 9 ? ? N1 C DT 9 ? ? 110.17 108.30 1.87 0.30 N 72 1 C6 C DT 9 ? ? C5 C DT 9 ? ? C7 C DT 9 ? ? 117.44 122.90 -5.46 0.60 N 73 1 N9 D DG 1 ? ? "C1'" D DG 1 ? ? "C2'" D DG 1 ? ? 122.84 114.30 8.54 1.40 N 74 1 "O4'" D DG 1 ? ? "C1'" D DG 1 ? ? N9 D DG 1 ? ? 114.80 108.30 6.50 0.30 N 75 1 "C4'" D DC 2 ? ? "C3'" D DC 2 ? ? "C2'" D DC 2 ? ? 97.50 102.20 -4.70 0.70 N 76 1 N1 D DC 2 ? ? "C1'" D DC 2 ? ? "C2'" D DC 2 ? ? 125.80 114.30 11.50 1.40 N 77 1 N1 D DC 2 ? ? C2 D DC 2 ? ? O2 D DC 2 ? ? 123.16 118.90 4.26 0.60 N 78 1 "C3'" D DC 2 ? ? "O3'" D DC 2 ? ? P D DG 3 ? ? 131.35 119.70 11.65 1.20 Y 79 1 "C4'" D DG 3 ? ? "C3'" D DG 3 ? ? "C2'" D DG 3 ? ? 97.21 102.20 -4.99 0.70 N 80 1 "O4'" D DG 3 ? ? "C1'" D DG 3 ? ? N9 D DG 3 ? ? 117.46 108.30 9.16 0.30 N 81 1 "C3'" D DG 4 ? ? "C2'" D DG 4 ? ? "C1'" D DG 4 ? ? 96.67 102.40 -5.73 0.80 N 82 1 "O4'" D DG 4 ? ? "C1'" D DG 4 ? ? N9 D DG 4 ? ? 110.44 108.30 2.14 0.30 N 83 1 "O4'" D DT 5 ? ? "C1'" D DT 5 ? ? "C2'" D DT 5 ? ? 97.22 105.90 -8.68 0.80 N 84 1 "O4'" D DT 5 ? ? "C1'" D DT 5 ? ? N1 D DT 5 ? ? 113.53 108.30 5.23 0.30 N 85 1 "C4'" D DG 6 ? ? "C3'" D DG 6 ? ? "C2'" D DG 6 ? ? 96.52 102.20 -5.68 0.70 N 86 1 "O4'" D DG 6 ? ? "C1'" D DG 6 ? ? "C2'" D DG 6 ? ? 97.34 105.90 -8.56 0.80 N 87 1 "O4'" D DG 6 ? ? "C1'" D DG 6 ? ? N9 D DG 6 ? ? 112.63 108.30 4.33 0.30 N 88 1 "O4'" D DG 7 ? ? "C1'" D DG 7 ? ? "C2'" D DG 7 ? ? 100.25 105.90 -5.65 0.80 N 89 1 "C3'" D DG 7 ? ? "O3'" D DG 7 ? ? P D DA 8 ? ? 129.06 119.70 9.36 1.20 Y 90 1 "C4'" D DA 8 ? ? "C3'" D DA 8 ? ? "C2'" D DA 8 ? ? 97.72 102.20 -4.48 0.70 N 91 1 "C3'" D DA 8 ? ? "C2'" D DA 8 ? ? "C1'" D DA 8 ? ? 97.50 102.40 -4.90 0.80 N 92 1 "O4'" D DA 8 ? ? "C1'" D DA 8 ? ? N9 D DA 8 ? ? 111.42 108.30 3.12 0.30 N 93 1 "O4'" D DT 9 ? ? "C4'" D DT 9 ? ? "C3'" D DT 9 ? ? 102.09 104.50 -2.41 0.40 N 94 1 "C4'" D DT 9 ? ? "C3'" D DT 9 ? ? "C2'" D DT 9 ? ? 97.92 102.20 -4.28 0.70 N 95 1 "O4'" D DT 9 ? ? "C1'" D DT 9 ? ? N1 D DT 9 ? ? 110.24 108.30 1.94 0.30 N 96 1 C6 D DT 9 ? ? C5 D DT 9 ? ? C7 D DT 9 ? ? 117.38 122.90 -5.52 0.60 N # _ndb_struct_conf_na.entry_id 1NYD _ndb_struct_conf_na.feature 'quadruple helix' #