data_1O2C # _entry.id 1O2C # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1O2C RCSB RCSB001716 WWPDB D_1000001716 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.pdb_id 1O51 _pdbx_database_PDB_obs_spr.replace_pdb_id 1O2C _pdbx_database_PDB_obs_spr.date 2003-08-19 _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_related.db_name TIGER _pdbx_database_related.db_id TM0021 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 1O2C _pdbx_database_status.status_code OBS _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2003-02-27 _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # _audit_author.name 'Joint Center for Structural Genomics' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of hypothetical protein (TM0021) from Thermotoga maritima at 2.50 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Genomics, Joint Center for Structural' _citation_author.ordinal 1 # _cell.length_a 100.110 _cell.length_b 100.110 _cell.length_c 100.110 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.entry_id 1O2C _cell.pdbx_unique_axis ? _cell.Z_PDB 24 # _symmetry.space_group_name_H-M 'P 43 3 2' _symmetry.entry_id 1O2C _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 212 _symmetry.cell_setting ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Hypothetical protein TM0021' 10416.689 1 ? ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 3 non-polymer syn "ADENOSINE-5'-DIPHOSPHATE" 427.201 1 ? ? ? ? 4 water nat water 18.015 40 ? ? ? ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 HIS n 1 2 HIS n 1 3 MSE n 1 4 LYS n 1 5 LEU n 1 6 LEU n 1 7 LYS n 1 8 ILE n 1 9 TYR n 1 10 LEU n 1 11 GLY n 1 12 GLU n 1 13 LYS n 1 14 ASP n 1 15 LYS n 1 16 HIS n 1 17 SER n 1 18 GLY n 1 19 LYS n 1 20 PRO n 1 21 LEU n 1 22 PHE n 1 23 GLU n 1 24 TYR n 1 25 LEU n 1 26 VAL n 1 27 LYS n 1 28 ARG n 1 29 ALA n 1 30 TYR n 1 31 GLU n 1 32 LEU n 1 33 GLY n 1 34 MSE n 1 35 LYS n 1 36 GLY n 1 37 VAL n 1 38 THR n 1 39 VAL n 1 40 TYR n 1 41 ARG n 1 42 GLY n 1 43 ILE n 1 44 MSE n 1 45 GLY n 1 46 PHE n 1 47 GLY n 1 48 HIS n 1 49 PRO n 1 50 ASP n 1 51 LEU n 1 52 PRO n 1 53 ILE n 1 54 VAL n 1 55 LEU n 1 56 GLU n 1 57 ILE n 1 58 VAL n 1 59 ASP n 1 60 GLU n 1 61 GLU n 1 62 GLU n 1 63 ARG n 1 64 ILE n 1 65 ASN n 1 66 LEU n 1 67 PHE n 1 68 LEU n 1 69 LYS n 1 70 GLU n 1 71 ILE n 1 72 ASP n 1 73 ASN n 1 74 ILE n 1 75 ASP n 1 76 PHE n 1 77 ASP n 1 78 GLY n 1 79 LEU n 1 80 VAL n 1 81 PHE n 1 82 THR n 1 83 ALA n 1 84 ASP n 1 85 VAL n 1 86 ASN n 1 87 VAL n 1 88 VAL n 1 89 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name bacteria _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene TM0021 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermotoga maritima' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id ? _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name bacteria _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name SWS _struct_ref.db_code Y021_THEMA _struct_ref.pdbx_db_accession Q9WXM9 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MKLLKIYLGEKDKHSGKPLFEYLVKRAYELGMKGVTVYRGIMGFGHKRHMHRSDFFSLSPDLPIVLEIVDEEERINLFLK EIDNIDFDGLVFTADVNVVKMG ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1O2C _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 114 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9WXM9 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 102 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -11 _struct_ref_seq.pdbx_auth_seq_align_end 102 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1O2C GLY A 2 ? SWS Q9WXM9 ? ? 'LEADER SEQUENCE' -10 1 1 1O2C SER A 3 ? SWS Q9WXM9 ? ? 'LEADER SEQUENCE' -9 2 1 1O2C ASP A 4 ? SWS Q9WXM9 ? ? 'LEADER SEQUENCE' -8 3 1 1O2C LYS A 5 ? SWS Q9WXM9 ? ? 'LEADER SEQUENCE' -7 4 1 1O2C ILE A 6 ? SWS Q9WXM9 ? ? 'LEADER SEQUENCE' -6 5 1 1O2C HIS A 7 ? SWS Q9WXM9 ? ? 'LEADER SEQUENCE' -5 6 1 1O2C HIS A 8 ? SWS Q9WXM9 ? ? 'LEADER SEQUENCE' -4 7 1 1O2C HIS A 9 ? SWS Q9WXM9 ? ? 'LEADER SEQUENCE' -3 8 1 1O2C HIS A 10 ? SWS Q9WXM9 ? ? 'LEADER SEQUENCE' -2 9 1 1O2C HIS A 1 ? SWS Q9WXM9 ? ? 'LEADER SEQUENCE' -1 10 1 1O2C HIS A 2 ? SWS Q9WXM9 ? ? 'LEADER SEQUENCE' 0 11 1 1O2C MSE A 3 ? SWS Q9WXM9 ? ? 'LEADER SEQUENCE' 1 12 1 1O2C MSE A 34 ? SWS Q9WXM9 MET 32 'MODIFIED RESIDUE' 32 13 1 1O2C MSE A 44 ? SWS Q9WXM9 MET 42 'MODIFIED RESIDUE' 42 14 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ADP non-polymer n "ADENOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O10 P2' 427.201 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1O2C _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.79 _exptl_crystal.density_percent_sol 67.33 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.60 _exptl_crystal_grow.pdbx_details '2.0 M (NH4)2SO4; 0.1 M citrate pH 5.6; 0.2 M K-Na-tartrate, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 293K, pH 5.60' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'APS-1 C' _diffrn_detector.pdbx_collection_date 2002-10-26 _diffrn_detector.details 'Rosenbaum-Rock vertical focusing mirror' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Rosenbaum-Rock double-crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.971 1.0 2 0.979 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19BM' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19BM _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.971, 0.979' # _reflns.entry_id 1O2C _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 2.500 _reflns.number_obs 6359 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.109 _reflns.pdbx_netI_over_av_sigmaI 70.0500 _reflns.B_iso_Wilson_estimate 51.99 _reflns.pdbx_redundancy 43.830 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_netI_over_sigmaI ? # _reflns_shell.d_res_high 2.50 _reflns_shell.d_res_low 2.59 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.588 _reflns_shell.meanI_over_sigI_obs 10.640 _reflns_shell.pdbx_redundancy 0.57 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1O2C _refine.ls_number_reflns_obs 6037 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 44.77 _refine.ls_d_res_high 2.50 _refine.ls_percent_reflns_obs 100.0 _refine.ls_R_factor_obs 0.209 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.209 _refine.ls_R_factor_R_free 0.222 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.600 _refine.ls_number_reflns_R_free 294 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.930 _refine.correlation_coeff_Fo_to_Fc_free 0.931 _refine.B_iso_mean 27.39 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;PROMINENT DIFFERENCE DENSITY ON THE CRYSTALLOGRAPHIC (AND BIOLOGICAL) THREE-FOLD AXIS WAS INTERPRETED AS TWO SULFATE IONS, EVEN THOUGH BOTH ARE REFINED TO HIGH B-FACTORS. THERE IS WEAK AND AMBIGUOUS DENSITY INDICATING THE GENERAL LOCATION OF THE LAST RESIDUE OMITTED IN THE CHAIN BREAK, SER59A. XFIT WAS ALSO USED IN REFINEMENT. ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model Isotropic _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.277 _refine.pdbx_overall_ESU_R_Free 0.203 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 709 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 37 _refine_hist.number_atoms_solvent 40 _refine_hist.number_atoms_total 786 _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 44.77 _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.010 0.021 ? 761 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 694 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.330 2.033 ? 1033 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.789 3.000 ? 1606 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.886 5.000 ? 89 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 29.689 24.062 ? 32 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.637 15.000 ? 129 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17.359 15.000 ? 3 'X-RAY DIFFRACTION' ? r_chiral_restr 0.086 0.200 ? 115 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 798 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 147 'X-RAY DIFFRACTION' ? r_nbd_refined 0.192 0.200 ? 121 'X-RAY DIFFRACTION' ? r_nbd_other 0.226 0.200 ? 739 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other 0.086 0.200 ? 455 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.165 0.200 ? 24 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.128 0.200 ? 14 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.287 0.200 ? 55 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.242 0.200 ? 17 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.554 1.500 ? 441 'X-RAY DIFFRACTION' ? r_mcangle_it 1.067 2.000 ? 708 'X-RAY DIFFRACTION' ? r_scbond_it 1.514 3.000 ? 320 'X-RAY DIFFRACTION' ? r_scangle_it 2.554 4.500 ? 324 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.50 _refine_ls_shell.d_res_low 2.57 _refine_ls_shell.number_reflns_R_work 421 _refine_ls_shell.R_factor_R_work 0.219 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.272 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 26 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1O2C _struct.title 'Crystal structure of hypothetical protein (TM0021) from Thermotoga maritima at 2.50 A resolution' _struct.pdbx_descriptor 'Hypothetical protein TM0021' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text 'TM0021, HYPOTHETICAL PROTEIN, STRUCTURAL GENOMICS, JCSG, UNKNOWN FUNCTION' _struct_keywords.entry_id 1O2C _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? # _struct_biol.details ;The biological unit is a hexamer with 32 point symmetry, as indicated by tight crystallographic contacts. GENERATING THE BIOMOLECULE COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. APPLY THE FOLLOWING TO CHAINS: A, X BIOMT1 1 1.000000 0.000000 0.000000 0.00000 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 BIOMT1 2 0.000000 0.000000 1.000000 50.05500 BIOMT2 2 -1.000000 0.000000 0.000000 50.05500 BIOMT3 2 0.000000 -1.000000 0.000000 0.00000 BIOMT1 3 0.000000 -1.000000 0.000000 50.05500 BIOMT2 3 0.000000 0.000000 -1.000000 0.00000 BIOMT3 3 1.000000 0.000000 0.000000 -50.05500 BIOMT1 4 0.000000 0.000000 -1.000000 25.02750 BIOMT2 4 0.000000 -1.000000 0.000000 25.02750 BIOMT3 4 -1.000000 0.000000 0.000000 25.02750 BIOMT1 5 0.000000 1.000000 0.000000 25.02750 BIOMT2 5 1.000000 0.000000 0.000000 -25.02750 BIOMT3 5 0.000000 0.000000 -1.000000 -25.02750 BIOMT1 6 -1.000000 0.000000 0.000000 75.08250 BIOMT2 6 0.000000 0.000000 1.000000 25.02750 BIOMT3 6 0.000000 1.000000 0.000000 -25.02750 ; _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 21 ? LEU A 32 ? LEU A 19 LEU A 30 1 ? 12 HELX_P HELX_P2 2 GLU A 60 ? ASN A 73 ? GLU A 71 ASN A 84 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 38 ? ARG A 41 ? THR A 36 ARG A 39 A 2 PRO A 52 ? ASP A 59 ? PRO A 63 ASP A 70 A 3 HIS A 2 ? GLY A 11 ? HIS A 0 GLY A 9 A 4 LEU A 79 ? ASN A 86 ? LEU A 90 ASN A 97 B 1 LYS A 15 ? HIS A 16 ? LYS A 13 HIS A 14 B 2 LYS A 19 ? PRO A 20 ? LYS A 17 PRO A 18 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 40 ? N TYR A 38 O VAL A 54 ? O VAL A 65 A 2 3 O ILE A 57 ? O ILE A 68 N LEU A 6 ? N LEU A 4 A 3 4 N LYS A 7 ? N LYS A 5 O PHE A 81 ? O PHE A 92 B 1 2 N HIS A 16 ? N HIS A 14 O LYS A 19 ? O LYS A 17 # _atom_sites.entry_id 1O2C _atom_sites.fract_transf_matrix[1][1] 0.009989 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009989 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009989 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 HIS 1 -1 -1 HIS HIS A . n A 1 2 HIS 2 0 0 HIS HIS A . n A 1 3 MSE 3 1 1 MSE MSE A . n A 1 4 LYS 4 2 2 LYS LYS A . n A 1 5 LEU 5 3 3 LEU LEU A . n A 1 6 LEU 6 4 4 LEU LEU A . n A 1 7 LYS 7 5 5 LYS LYS A . n A 1 8 ILE 8 6 6 ILE ILE A . n A 1 9 TYR 9 7 7 TYR TYR A . n A 1 10 LEU 10 8 8 LEU LEU A . n A 1 11 GLY 11 9 9 GLY GLY A . n A 1 12 GLU 12 10 10 GLU GLU A . n A 1 13 LYS 13 11 11 LYS LYS A . n A 1 14 ASP 14 12 12 ASP ASP A . n A 1 15 LYS 15 13 13 LYS LYS A . n A 1 16 HIS 16 14 14 HIS HIS A . n A 1 17 SER 17 15 15 SER SER A . n A 1 18 GLY 18 16 16 GLY GLY A . n A 1 19 LYS 19 17 17 LYS LYS A . n A 1 20 PRO 20 18 18 PRO PRO A . n A 1 21 LEU 21 19 19 LEU LEU A . n A 1 22 PHE 22 20 20 PHE PHE A . n A 1 23 GLU 23 21 21 GLU GLU A . n A 1 24 TYR 24 22 22 TYR TYR A . n A 1 25 LEU 25 23 23 LEU LEU A . n A 1 26 VAL 26 24 24 VAL VAL A . n A 1 27 LYS 27 25 25 LYS LYS A . n A 1 28 ARG 28 26 26 ARG ARG A . n A 1 29 ALA 29 27 27 ALA ALA A . n A 1 30 TYR 30 28 28 TYR TYR A . n A 1 31 GLU 31 29 29 GLU GLU A . n A 1 32 LEU 32 30 30 LEU LEU A . n A 1 33 GLY 33 31 31 GLY GLY A . n A 1 34 MSE 34 32 32 MSE MSE A . n A 1 35 LYS 35 33 33 LYS LYS A . n A 1 36 GLY 36 34 34 GLY GLY A . n A 1 37 VAL 37 35 35 VAL VAL A . n A 1 38 THR 38 36 36 THR THR A . n A 1 39 VAL 39 37 37 VAL VAL A . n A 1 40 TYR 40 38 38 TYR TYR A . n A 1 41 ARG 41 39 39 ARG ARG A . n A 1 42 GLY 42 40 40 GLY GLY A . n A 1 43 ILE 43 41 41 ILE ILE A . n A 1 44 MSE 44 42 42 MSE MSE A . n A 1 45 GLY 45 43 43 GLY GLY A . n A 1 46 PHE 46 44 44 PHE PHE A . n A 1 47 GLY 47 45 45 GLY GLY A . n A 1 48 HIS 48 46 46 HIS HIS A . n A 1 49 PRO 49 60 60 PRO PRO A . n A 1 50 ASP 50 61 61 ASP ASP A . n A 1 51 LEU 51 62 62 LEU LEU A . n A 1 52 PRO 52 63 63 PRO PRO A . n A 1 53 ILE 53 64 64 ILE ILE A . n A 1 54 VAL 54 65 65 VAL VAL A . n A 1 55 LEU 55 66 66 LEU LEU A . n A 1 56 GLU 56 67 67 GLU GLU A . n A 1 57 ILE 57 68 68 ILE ILE A . n A 1 58 VAL 58 69 69 VAL VAL A . n A 1 59 ASP 59 70 70 ASP ASP A . n A 1 60 GLU 60 71 71 GLU GLU A . n A 1 61 GLU 61 72 72 GLU GLU A . n A 1 62 GLU 62 73 73 GLU GLU A . n A 1 63 ARG 63 74 74 ARG ARG A . n A 1 64 ILE 64 75 75 ILE ILE A . n A 1 65 ASN 65 76 76 ASN ASN A . n A 1 66 LEU 66 77 77 LEU LEU A . n A 1 67 PHE 67 78 78 PHE PHE A . n A 1 68 LEU 68 79 79 LEU LEU A . n A 1 69 LYS 69 80 80 LYS LYS A . n A 1 70 GLU 70 81 81 GLU GLU A . n A 1 71 ILE 71 82 82 ILE ILE A . n A 1 72 ASP 72 83 83 ASP ASP A . n A 1 73 ASN 73 84 84 ASN ASN A . n A 1 74 ILE 74 85 85 ILE ILE A . n A 1 75 ASP 75 86 86 ASP ASP A . n A 1 76 PHE 76 87 87 PHE PHE A . n A 1 77 ASP 77 88 88 ASP ASP A . n A 1 78 GLY 78 89 89 GLY GLY A . n A 1 79 LEU 79 90 90 LEU LEU A . n A 1 80 VAL 80 91 91 VAL VAL A . n A 1 81 PHE 81 92 92 PHE PHE A . n A 1 82 THR 82 93 93 THR THR A . n A 1 83 ALA 83 94 94 ALA ALA A . n A 1 84 ASP 84 95 95 ASP ASP A . n A 1 85 VAL 85 96 96 VAL VAL A . n A 1 86 ASN 86 97 97 ASN ASN A . n A 1 87 VAL 87 98 98 VAL VAL A . n A 1 88 VAL 88 99 99 VAL VAL A . n A 1 89 LYS 89 100 100 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 301 1 SO4 SO4 ? . C 2 SO4 1 302 2 SO4 SO4 ? . D 3 ADP 1 200 200 ADP ADP ? . E 4 HOH 1 1 1 HOH HOH ? . E 4 HOH 2 2 2 HOH HOH ? . E 4 HOH 3 3 3 HOH HOH ? . E 4 HOH 4 4 4 HOH HOH ? . E 4 HOH 5 5 5 HOH HOH ? . E 4 HOH 6 6 6 HOH HOH ? . E 4 HOH 7 7 7 HOH HOH ? . E 4 HOH 8 8 8 HOH HOH ? . E 4 HOH 9 9 9 HOH HOH ? . E 4 HOH 10 10 10 HOH HOH ? . E 4 HOH 11 11 11 HOH HOH ? . E 4 HOH 12 12 12 HOH HOH ? . E 4 HOH 13 13 13 HOH HOH ? . E 4 HOH 14 16 16 HOH HOH ? . E 4 HOH 15 18 18 HOH HOH ? . E 4 HOH 16 19 19 HOH HOH ? . E 4 HOH 17 20 20 HOH HOH ? . E 4 HOH 18 21 21 HOH HOH ? . E 4 HOH 19 22 22 HOH HOH ? . E 4 HOH 20 24 24 HOH HOH ? . E 4 HOH 21 25 25 HOH HOH ? . E 4 HOH 22 29 29 HOH HOH ? . E 4 HOH 23 31 31 HOH HOH ? . E 4 HOH 24 34 34 HOH HOH ? . E 4 HOH 25 35 35 HOH HOH ? . E 4 HOH 26 36 36 HOH HOH ? . E 4 HOH 27 37 37 HOH HOH ? . E 4 HOH 28 38 38 HOH HOH ? . E 4 HOH 29 39 39 HOH HOH ? . E 4 HOH 30 40 40 HOH HOH ? . E 4 HOH 31 41 41 HOH HOH ? . E 4 HOH 32 42 42 HOH HOH ? . E 4 HOH 33 43 43 HOH HOH ? . E 4 HOH 34 44 44 HOH HOH ? . E 4 HOH 35 46 46 HOH HOH ? . E 4 HOH 36 47 47 HOH HOH ? . E 4 HOH 37 48 48 HOH HOH ? . E 4 HOH 38 49 49 HOH HOH ? . E 4 HOH 39 50 50 HOH HOH ? . E 4 HOH 40 52 52 HOH HOH ? . # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 . SO4 301 ? B SO4 . 2 1 . SO4 302 ? C SO4 . 3 1 . SO4 302 ? C SO4 . 4 1 . HOH 2 ? E HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-04-01 2 'Structure model' 1 1 2003-08-19 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 48.1772 _pdbx_refine_tls.origin_y 12.4170 _pdbx_refine_tls.origin_z 4.3603 _pdbx_refine_tls.T[1][1] 0.0870 _pdbx_refine_tls.T[2][2] -0.0782 _pdbx_refine_tls.T[3][3] -0.0087 _pdbx_refine_tls.T[1][2] -0.0212 _pdbx_refine_tls.T[1][3] -0.0044 _pdbx_refine_tls.T[2][3] -0.0864 _pdbx_refine_tls.L[1][1] 3.6345 _pdbx_refine_tls.L[2][2] 2.7467 _pdbx_refine_tls.L[3][3] 4.0089 _pdbx_refine_tls.L[1][2] 0.5993 _pdbx_refine_tls.L[1][3] 2.0033 _pdbx_refine_tls.L[2][3] -1.5316 _pdbx_refine_tls.S[1][1] -0.1502 _pdbx_refine_tls.S[1][2] -0.5001 _pdbx_refine_tls.S[1][3] 0.5056 _pdbx_refine_tls.S[2][1] 0.5206 _pdbx_refine_tls.S[2][2] -0.0401 _pdbx_refine_tls.S[2][3] 0.1429 _pdbx_refine_tls.S[3][1] -0.7251 _pdbx_refine_tls.S[3][2] -0.1383 _pdbx_refine_tls.S[3][3] 0.1903 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id -1 _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id A _pdbx_refine_tls_group.end_label_seq_id 200 _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.selection_details ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data collection' . ? 1 SCALEPACK 'data reduction' . ? 2 RESOLVE/SOLVE 'model building' . ? 3 XFIT/REFMAC refinement . ? 4 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 88 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -85.82 _pdbx_validate_torsion.psi -98.36 # _pdbx_validate_polymer_linkage.id 1 _pdbx_validate_polymer_linkage.PDB_model_num 1 _pdbx_validate_polymer_linkage.auth_atom_id_1 C _pdbx_validate_polymer_linkage.auth_asym_id_1 A _pdbx_validate_polymer_linkage.auth_comp_id_1 HIS _pdbx_validate_polymer_linkage.auth_seq_id_1 46 _pdbx_validate_polymer_linkage.PDB_ins_code_1 ? _pdbx_validate_polymer_linkage.label_alt_id_1 ? _pdbx_validate_polymer_linkage.auth_atom_id_2 N _pdbx_validate_polymer_linkage.auth_asym_id_2 A _pdbx_validate_polymer_linkage.auth_comp_id_2 PRO _pdbx_validate_polymer_linkage.auth_seq_id_2 60 _pdbx_validate_polymer_linkage.PDB_ins_code_2 ? _pdbx_validate_polymer_linkage.label_alt_id_2 ? _pdbx_validate_polymer_linkage.dist 19.56 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 11 ? CE ? A LYS 13 CE 2 1 Y 1 A LYS 11 ? NZ ? A LYS 13 NZ 3 1 Y 1 A LYS 17 ? NZ ? A LYS 19 NZ 4 1 Y 1 A LYS 25 ? CE ? A LYS 27 CE 5 1 Y 1 A LYS 25 ? NZ ? A LYS 27 NZ 6 1 Y 1 A MSE 32 ? CG ? A MSE 34 CG 7 1 Y 1 A MSE 32 ? SE ? A MSE 34 SE 8 1 Y 1 A MSE 32 ? CE ? A MSE 34 CE 9 1 Y 1 A LYS 80 ? CD ? A LYS 69 CD 10 1 Y 1 A LYS 80 ? CE ? A LYS 69 CE 11 1 Y 1 A LYS 80 ? NZ ? A LYS 69 NZ 12 1 Y 1 A ASN 84 ? CG ? A ASN 73 CG 13 1 Y 1 A ASN 84 ? OD1 ? A ASN 73 OD1 14 1 Y 1 A ASN 84 ? ND2 ? A ASN 73 ND2 15 1 Y 1 A ASP 86 ? CG ? A ASP 75 CG 16 1 Y 1 A ASP 86 ? OD1 ? A ASP 75 OD1 17 1 Y 1 A ASP 86 ? OD2 ? A ASP 75 OD2 18 1 Y 1 A ASP 88 ? CG ? A ASP 77 CG 19 1 Y 1 A ASP 88 ? OD1 ? A ASP 77 OD1 20 1 Y 1 A ASP 88 ? OD2 ? A ASP 77 OD2 21 1 N 1 . ADP 200 ? "O5'" ? D ADP 1 "O5'" 22 1 N 1 . ADP 200 ? "C5'" ? D ADP 1 "C5'" 23 1 N 1 . ADP 200 ? "C4'" ? D ADP 1 "C4'" 24 1 N 1 . ADP 200 ? "O4'" ? D ADP 1 "O4'" 25 1 N 1 . ADP 200 ? "C3'" ? D ADP 1 "C3'" 26 1 N 1 . ADP 200 ? "O3'" ? D ADP 1 "O3'" 27 1 N 1 . ADP 200 ? "C2'" ? D ADP 1 "C2'" 28 1 N 1 . ADP 200 ? "O2'" ? D ADP 1 "O2'" 29 1 N 1 . ADP 200 ? "C1'" ? D ADP 1 "C1'" # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 "ADENOSINE-5'-DIPHOSPHATE" ADP 4 water HOH #