HEADER PROTEIN BINDING 24-MAR-03 1OEB TITLE MONA/GADS SH3C DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: GRB2-RELATED ADAPTOR PROTEIN 2; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: SH3C DOMAIN, RESIDUES 265-322; COMPND 5 SYNONYM: GADS PROTEIN, GROWTH FACTOR RECEPTOR PROTEIN, GRBLG, GRF40 COMPND 6 ADAPTOR PROTEIN, GRF-40, GRB-2-LIKE PROTEIN, GRB2L, GRBX, P38, COMPND 7 HEMATOPOIETIC CELL-ASSOCIATED ADAPTOR PROTEIN GRPL, ADAPTER PROTEIN COMPND 8 GRID, SH3-SH2-SH3 ADAPTOR MONA; COMPND 9 ENGINEERED: YES; COMPND 10 OTHER_DETAILS: THROMBIN CLEAVAGE OVERHANG BETWEEN A-4 AND A-1; COMPND 11 MOL_ID: 2; COMPND 12 MOLECULE: LYMPHOCYTE CYTOSOLIC PROTEIN 2; COMPND 13 CHAIN: C, D; COMPND 14 FRAGMENT: PROTEIN INTERACTION PEPTIDE, RESIDUES 231-243; COMPND 15 SYNONYM: SH2 DOMAIN-CONTAINING LEUCOCYTE PROTEIN OF 76 KDA, SLP-76 COMPND 16 TYROSINE PHOSPHOPROTEIN, SLP76; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PGEX-6P-1; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 12 ORGANISM_COMMON: MOUSE; SOURCE 13 ORGANISM_TAXID: 10090 KEYWDS PROTEIN BINDING, SH3 DOMAIN-COMPLEX, SH3, SLP-76, DIMER, MONA, GADS, KEYWDS 2 SIGNAL TRANDUCTION EXPDTA X-RAY DIFFRACTION AUTHOR M.HARKIOLAKI,M.LEWITZKY,R.J.C.GILBERT,E.Y.JONES,R.P.BOURETTE, AUTHOR 2 G.MOUCHIROUD,H.SONDERMANN,I.MOAREFI,S.M.FELLER REVDAT 4 08-MAY-24 1OEB 1 LINK REVDAT 3 24-FEB-09 1OEB 1 VERSN REVDAT 2 05-JUN-03 1OEB 1 JRNL REVDAT 1 02-APR-03 1OEB 0 JRNL AUTH M.HARKIOLAKI,M.LEWITZKY,R.J.C.GILBERT,E.Y.JONES, JRNL AUTH 2 R.P.BOURETTE,G.MOUCHIROUD,H.SONDERMANN,I.MOAREFI,S.M.FELLER JRNL TITL STRUCTURAL BASIS FOR SH3 DOMAIN-MEDIATED HIGH-AFFINITY JRNL TITL 2 BINDING BETWEEN MONA/GADS AND SLP-76 JRNL REF EMBO J. V. 22 2571 2003 JRNL REFN ISSN 0261-4189 JRNL PMID 12773374 JRNL DOI 10.1093/EMBOJ/CDG258 REMARK 2 REMARK 2 RESOLUTION. 1.76 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.76 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.69 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 3 NUMBER OF REFLECTIONS : 12567 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 652 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.76 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.80 REMARK 3 REFLECTION IN BIN (WORKING SET) : 895 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2530 REMARK 3 BIN FREE R VALUE SET COUNT : 39 REMARK 3 BIN FREE R VALUE : 0.3090 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1098 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 238 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.64 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.04000 REMARK 3 B22 (A**2) : 0.01000 REMARK 3 B33 (A**2) : 0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.134 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.139 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.097 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.097 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.914 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1130 ; 0.017 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1537 ; 1.545 ; 1.955 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 133 ; 5.067 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 161 ; 0.115 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 879 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 491 ; 0.222 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 139 ; 0.186 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 1 ; 0.200 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 36 ; 0.211 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 31 ; 0.166 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 690 ; 0.938 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1104 ; 1.700 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 440 ; 2.865 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 433 ; 4.368 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 2 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 3 A 55 2 REMARK 3 1 B 3 B 55 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 212 ; 0.09 ; 0.05 REMARK 3 MEDIUM POSITIONAL 1 A (A): 218 ; 0.39 ; 0.50 REMARK 3 TIGHT THERMAL 1 A (A**2): 212 ; 0.44 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 218 ; 1.28 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : C D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 C 2 C 13 4 REMARK 3 1 D 2 D 13 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 2 C (A): 89 ; 0.25 ; 0.50 REMARK 3 MEDIUM THERMAL 2 C (A**2): 89 ; 1.30 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1OEB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-MAR-03. REMARK 100 THE DEPOSITION ID IS D_1290012437. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-NOV-02 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9786 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15317 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.690 REMARK 200 RESOLUTION RANGE LOW (A) : 36.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 4.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 28.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.69 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 81.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.40400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: MAD DATA COLLECTED AT SELENIUM PEAK, INFLECTION AND HIGH REMARK 200 ENERGY REMOTE WAVELENGTHS. DATA STATISTICS REFLECT THE PEAK REMARK 200 WAVELENGTH. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN WAS CRYSTALLISED FROM: 20% REMARK 280 PEG4000, 5 MM CDCL2,50 MM NA CACODYLATE PH 6.5, PH 6.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 36.03600 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 GADS/MONA:INTERACTS WITH SLP-76 TO REGULATE NF-AT REMARK 400 ACTIVATION. REMARK 400 SLP-76:INVOLVED IN T CELL ANTIGEN RECEPTOR MEDIATED REMARK 400 SIGNALING REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 56 REMARK 465 MET A 57 REMARK 465 ARG A 58 REMARK 465 PRO B -4 REMARK 465 LEU B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 VAL B 1 REMARK 465 ARG B 2 REMARK 465 ARG B 58 REMARK 465 PRO C 1 REMARK 465 PRO D 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 14 O HOH A 2059 2.18 REMARK 500 O HOH B 2084 O HOH B 2085 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2007 DISTANCE = 6.13 ANGSTROMS REMARK 525 HOH A2018 DISTANCE = 6.77 ANGSTROMS REMARK 525 HOH A2021 DISTANCE = 6.55 ANGSTROMS REMARK 525 HOH A2033 DISTANCE = 5.82 ANGSTROMS REMARK 525 HOH D2006 DISTANCE = 6.25 ANGSTROMS REMARK 525 HOH D2007 DISTANCE = 6.65 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1056 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 24 OE1 REMARK 620 2 GLU A 24 OE2 55.6 REMARK 620 3 HIS A 42 NE2 89.5 100.4 REMARK 620 4 GLU B 24 OE2 167.0 137.4 88.6 REMARK 620 5 GLU B 24 OE1 140.2 85.2 91.3 52.7 REMARK 620 6 HIS B 42 NE2 89.2 88.6 168.0 89.9 97.3 REMARK 620 7 HOH B2049 O 89.8 145.0 82.7 77.2 129.7 85.4 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A1056 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1H3H RELATED DB: PDB REMARK 900 STRUCTURAL BASIS FOR SPECIFIC RECOGNITION OF AN RXXK-CONTAINING SLP- REMARK 900 76 PEPTIDE BY THE GADS C-TERMINAL SH3 DOMAIN REMARK 999 REMARK 999 SEQUENCE REMARK 999 SELENOMETHIONYL MONA/GADS SH3C WAS PRODUCED IN BL21(DE3) REMARK 999 CELLS BY INHIBITION OF ENDOGENOUS METHIONINE PRODUCTION AND REMARK 999 SUPPLEMENTATION WITH SELENOMETHIONINE THROUGH THE MEDIUM. DBREF 1OEB A -4 -1 PDB 1OEB 1OEB -4 -1 DBREF 1OEB A 1 58 UNP O89100 GRP2_MOUSE 265 322 DBREF 1OEB B -4 -1 PDB 1OEB 1OEB -4 -1 DBREF 1OEB B 1 58 UNP O89100 GRP2_MOUSE 265 322 DBREF 1OEB C 1 13 UNP Q60787 LCP2_MOUSE 231 243 DBREF 1OEB D 1 13 UNP Q60787 LCP2_MOUSE 231 243 SEQRES 1 A 62 PRO LEU GLY SER VAL ARG TRP ALA ARG ALA LEU TYR ASP SEQRES 2 A 62 PHE GLU ALA LEU GLU GLU ASP GLU LEU GLY PHE ARG SER SEQRES 3 A 62 GLY GLU VAL VAL GLU VAL LEU ASP SER SER ASN PRO SER SEQRES 4 A 62 TRP TRP THR GLY ARG LEU HIS ASN LYS LEU GLY LEU PHE SEQRES 5 A 62 PRO ALA ASN TYR VAL ALA PRO MET MET ARG SEQRES 1 B 62 PRO LEU GLY SER VAL ARG TRP ALA ARG ALA LEU TYR ASP SEQRES 2 B 62 PHE GLU ALA LEU GLU GLU ASP GLU LEU GLY PHE ARG SER SEQRES 3 B 62 GLY GLU VAL VAL GLU VAL LEU ASP SER SER ASN PRO SER SEQRES 4 B 62 TRP TRP THR GLY ARG LEU HIS ASN LYS LEU GLY LEU PHE SEQRES 5 B 62 PRO ALA ASN TYR VAL ALA PRO MET MET ARG SEQRES 1 C 13 PRO ALA PRO SER ILE ASP ARG SER THR LYS PRO PRO LEU SEQRES 1 D 13 PRO ALA PRO SER ILE ASP ARG SER THR LYS PRO PRO LEU HET CD A1056 1 HETNAM CD CADMIUM ION FORMUL 5 CD CD 2+ FORMUL 6 HOH *238(H2 O) HELIX 1 1 ASP C 6 LYS C 10 5 5 HELIX 2 2 ASP D 6 LYS D 10 5 5 SHEET 1 AA 5 LYS A 44 PRO A 49 0 SHEET 2 AA 5 TRP A 36 LEU A 41 -1 O TRP A 37 N PHE A 48 SHEET 3 AA 5 VAL A 25 ASP A 30 -1 O GLU A 27 N ARG A 40 SHEET 4 AA 5 TRP A 3 ALA A 6 -1 O ALA A 4 N VAL A 26 SHEET 5 AA 5 VAL A 53 ALA A 54 -1 O ALA A 54 N ARG A 5 SHEET 1 BA 5 LYS B 44 PRO B 49 0 SHEET 2 BA 5 TRP B 36 LEU B 41 -1 O TRP B 37 N PHE B 48 SHEET 3 BA 5 VAL B 25 ASP B 30 -1 O GLU B 27 N ARG B 40 SHEET 4 BA 5 ALA B 4 ALA B 6 -1 O ALA B 4 N VAL B 26 SHEET 5 BA 5 VAL B 53 PRO B 55 -1 O ALA B 54 N ARG B 5 LINK OE1 GLU A 24 CD CD A1056 1555 1555 2.51 LINK OE2 GLU A 24 CD CD A1056 1555 1555 2.33 LINK NE2 HIS A 42 CD CD A1056 1555 1555 2.30 LINK CD CD A1056 OE2 GLU B 24 1555 1555 2.49 LINK CD CD A1056 OE1 GLU B 24 1555 1555 2.39 LINK CD CD A1056 NE2 HIS B 42 1555 1555 2.32 LINK CD CD A1056 O HOH B2049 1555 1555 2.00 SITE 1 AC1 5 GLU A 24 HIS A 42 GLU B 24 HIS B 42 SITE 2 AC1 5 HOH B2049 CRYST1 28.691 72.072 34.168 90.00 97.70 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.034854 0.000000 0.004712 0.00000 SCALE2 0.000000 0.013875 0.000000 0.00000 SCALE3 0.000000 0.000000 0.029533 0.00000 MTRIX1 1 -0.999190 0.037270 -0.015080 4.09705 1 MTRIX2 1 -0.038540 -0.994370 0.094990 6.12949 1 MTRIX3 1 -0.011460 0.095490 0.995360 -0.31041 1 MTRIX1 2 -0.998760 0.048840 0.009680 4.09731 1 MTRIX2 2 0.049540 -0.994190 0.095560 5.65470 1 MTRIX3 2 0.004960 0.095920 0.995380 -0.52231 1