HEADER TRANSCRIPTIONAL COACTIVATOR 02-JUL-03 1OJ5 TITLE CRYSTAL STRUCTURE OF THE NCO-A1 PAS-B DOMAIN BOUND TO THE STAT6 TITLE 2 TRANSACTIVATION DOMAIN LXXLL MOTIF COMPND MOL_ID: 1; COMPND 2 MOLECULE: STEROID RECEPTOR COACTIVATOR 1A; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: NCO-A1 PAS-B DOMAIN, RESIDUES 257-385; COMPND 5 SYNONYM: STEROID RECEPTOR COACTIVATOR-1, NCOA1, SRC1A; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 6; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: STAT6 LXXLL MOTIF, RESIDUES 795-808; COMPND 12 SYNONYM: IL-4 STAT; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET16BTEV; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET16BTEV-NCOA-1; SOURCE 10 OTHER_DETAILS: CELLULAR LOCATION\: NUCLEUS; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606 KEYWDS TRANSCRIPTIONAL COACTIVATOR, COMPLEX, LXXLL MOTIF, TRANSCRIPTIONAL KEYWDS 2 REGULATION, STAT6, PAS DOMAIN, IL-4 STAT EXPDTA X-RAY DIFFRACTION AUTHOR A.RAZETO,V.RAMAKRISHNAN,K.GILLER,N.LAKOMEK,T.CARLOMAGNO,C.GRIESINGER, AUTHOR 2 M.LODRINI,C.M.LITTERST,E.PFTIZNER,S.BECKER REVDAT 3 08-MAY-24 1OJ5 1 REMARK REVDAT 2 24-FEB-09 1OJ5 1 VERSN REVDAT 1 12-FEB-04 1OJ5 0 JRNL AUTH A.RAZETO,V.RAMAKRISHNAN,C.M.LITTERST,K.GILLER,C.GRIESINGER, JRNL AUTH 2 T.CARLOMAGNO,N.LAKOMEK,T.HEIMBURG,M.LODRINI,E.PFITZNER, JRNL AUTH 3 S.BECKER JRNL TITL STRUCTURE OF THE NCOA-1/SRC-1 PAS-B DOMAIN BOUND TO THE JRNL TITL 2 LXXLL MOTIF OF THE STAT6 TRANSACTIVATION DOMAIN JRNL REF J.MOL.BIOL. V. 336 319 2004 JRNL REFN ISSN 0022-2836 JRNL PMID 14757047 JRNL DOI 10.1016/J.JMB.2003.12.057 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH C.M.LITTERST,E.PFITZNER REMARK 1 TITL AN LXXLL MOTIF IN THE TRANSACTIVATION DOMAIN OF STAT6 REMARK 1 TITL 2 MEDIATES RECRUITMENT OF NCOA-1/SRC-1 REMARK 1 REF J.BIOL.CHEM. V. 277 36052 2002 REMARK 1 REFN ISSN 0021-9258 REMARK 1 PMID 12138096 REMARK 1 DOI 10.1074/JBC.M203556200 REMARK 1 REFERENCE 2 REMARK 1 AUTH C.M.LITTERST,E.PFITZNER REMARK 1 TITL TRANSCRIPTIONAL ACTIVATION BY STAT6 REQUIRES THE DIRECT REMARK 1 TITL 2 INTERACTION WITH NCOA-1 REMARK 1 REF J.BIOL.CHEM. V. 276 45713 2001 REMARK 1 REFN ISSN 0021-9258 REMARK 1 PMID 11574547 REMARK 1 DOI 10.1074/JBC.M108132200 REMARK 2 REMARK 2 RESOLUTION. 2.21 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.21 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.21 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 8138 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 0.050 REMARK 3 FREE R VALUE TEST SET COUNT : 375 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.21 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 570 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1670 REMARK 3 BIN FREE R VALUE SET COUNT : 30 REMARK 3 BIN FREE R VALUE : 0.2300 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 918 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 116 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.87000 REMARK 3 B22 (A**2) : 0.87000 REMARK 3 B33 (A**2) : -1.30000 REMARK 3 B12 (A**2) : 0.43000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.195 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.178 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.075 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.825 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 948 ; 0.011 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 865 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1281 ; 1.272 ; 1.957 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2012 ; 0.810 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 116 ; 6.790 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 148 ; 0.078 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1027 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 192 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 184 ; 0.195 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 968 ; 0.237 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 567 ; 0.082 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 76 ; 0.175 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 4 ; 0.165 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 44 ; 0.314 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 13 ; 0.138 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 594 ; 0.852 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 965 ; 1.592 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 354 ; 1.930 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 316 ; 3.121 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL PLUS MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. THE LAST RUN OF REFINEMENT WAS PERFORMED WITH ALL THE REMARK 3 REFLECTIONS. THE R FREE REPORTED ABOVE IS REFERRED TO THE REMARK 3 PREVIOUS RUN OF REFINEMENT. SIDE CHAINS WITH POOR ELECTRON REMARK 3 DENSITY WERE ASSIGNED OCCUPANCY 0.5 REMARK 4 REMARK 4 1OJ5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-JUL-03. REMARK 100 THE DEPOSITION ID IS D_1290012900. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-MAR-03 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : SIEMENS M18X REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : OSMIC MIRRORS CMF12-38CU6 REMARK 200 OPTICS : OSMIC MIRRORS CMF12-38CU6 REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8138 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.210 REMARK 200 RESOLUTION RANGE LOW (A) : 19.210 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 16.80 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 29.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.21 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.25 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.1 REMARK 200 DATA REDUNDANCY IN SHELL : 16.00 REMARK 200 R MERGE FOR SHELL (I) : 0.32540 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 8.710 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: OTHER REMARK 200 SOFTWARE USED: SHELXD, SHELXE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20 % PEG3350, 0.2 M LICL, PH 7.00 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.93333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 24.46667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 48.93333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 24.46667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THIS BIOMOLECULE IS A HETERODIMERIC COMPLEX REMARK 300 OF A PROTEINCHAIN WITH A PEPTIDE REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE LYS(343)ARG REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 254 REMARK 465 HIS A 255 REMARK 465 MET A 256 REMARK 465 THR A 257 REMARK 465 GLY A 258 REMARK 465 GLN A 350 REMARK 465 SER A 351 REMARK 465 PRO A 352 REMARK 465 ASP A 353 REMARK 465 HIS A 368 REMARK 465 SER A 369 REMARK 465 GLY A 370 REMARK 465 LEU A 371 REMARK 465 SER A 372 REMARK 465 PRO A 373 REMARK 465 GLN A 374 REMARK 465 ASP A 375 REMARK 465 ASP A 376 REMARK 465 THR A 377 REMARK 465 ASN A 378 REMARK 465 SER A 379 REMARK 465 GLY A 380 REMARK 465 MET A 381 REMARK 465 SER A 382 REMARK 465 ILE A 383 REMARK 465 PRO A 384 REMARK 465 ARG A 385 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR A 297 CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG A 305 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 315 CD OE1 NE2 REMARK 470 MET A 318 CE REMARK 470 LYS A 345 CD CE NZ REMARK 470 MET A 354 CB CG SD CE REMARK 470 GLU A 367 CG CD OE1 OE2 REMARK 470 LYS B 804 CD CE NZ REMARK 470 LEU B 807 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 290 CB - CG - OD2 ANGL. DEV. = 6.3 DEGREES REMARK 500 ASP A 365 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2004 DISTANCE = 5.89 ANGSTROMS REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR PROVIDED. REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR PROVIDED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A1368 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A1370 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A1371 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A1372 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1K74 RELATED DB: PDB REMARK 900 THE 2.3 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF THEHETERODIMER OF REMARK 900 THE HUMAN PPARGAMMA AND RXRALPHA LIGANDBINDING DOMAINS RESPECTIVELY REMARK 900 BOUND WITH GW409544 AND 9- CISRETINOIC ACID AND CO-ACTIVATOR REMARK 900 PEPTIDES. REMARK 900 RELATED ID: 1K7L RELATED DB: PDB REMARK 900 THE 2.5 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF THE HUMANPPARALPHA REMARK 900 LIGAND BINDING DOMAIN BOUND WITH GW409544 AND ACO- ACTIVATOR REMARK 900 PEPTIDE. REMARK 900 RELATED ID: 2PRG RELATED DB: PDB REMARK 900 LIGAND-BINDING DOMAIN OF THE HUMAN PEROXISOME PROLIFERATOR REMARK 900 ACTIVATED RECEPTOR GAMMA REMARK 999 REMARK 999 SEQUENCE REMARK 999 RESIDUES A254-A256 ARE FROM THE VECTOR PET16BTEV DBREF 1OJ5 A 254 256 PDB 1OJ5 1OJ5 254 256 DBREF 1OJ5 A 257 367 UNP O61202 O61202 257 367 DBREF 1OJ5 B 795 808 UNP P42226 STA6_HUMAN 795 808 SEQADV 1OJ5 ARG A 343 UNP O61202 LYS 343 ENGINEERED MUTATION SEQRES 1 A 132 GLY HIS MET THR GLY VAL GLU SER PHE MET THR LYS GLN SEQRES 2 A 132 ASP THR THR GLY LYS ILE ILE SER ILE ASP THR SER SER SEQRES 3 A 132 LEU ARG ALA ALA GLY ARG THR GLY TRP GLU ASP LEU VAL SEQRES 4 A 132 ARG LYS CYS ILE TYR ALA PHE PHE GLN PRO GLN GLY ARG SEQRES 5 A 132 GLU PRO SER TYR ALA ARG GLN LEU PHE GLN GLU VAL MET SEQRES 6 A 132 THR ARG GLY THR ALA SER SER PRO SER TYR ARG PHE ILE SEQRES 7 A 132 LEU ASN ASP GLY THR MET LEU SER ALA HIS THR ARG CYS SEQRES 8 A 132 LYS LEU CYS TYR PRO GLN SER PRO ASP MET GLN PRO PHE SEQRES 9 A 132 ILE MET GLY ILE HIS ILE ILE ASP ARG GLU HIS SER GLY SEQRES 10 A 132 LEU SER PRO GLN ASP ASP THR ASN SER GLY MET SER ILE SEQRES 11 A 132 PRO ARG SEQRES 1 B 14 LEU PRO PRO THR GLU GLN ASP LEU THR LYS LEU LEU LEU SEQRES 2 B 14 GLU HET IOD A1368 1 HET IOD A1369 1 HET IOD A1370 1 HET IOD A1371 1 HET IOD A1372 1 HETNAM IOD IODIDE ION FORMUL 3 IOD 5(I 1-) FORMUL 8 HOH *116(H2 O) HELIX 1 1 THR A 277 ALA A 282 1 6 HELIX 2 2 GLY A 287 GLN A 301 1 15 HELIX 3 3 SER A 308 THR A 319 1 12 HELIX 4 4 THR B 798 GLU B 808 1 11 SHEET 1 AA 5 LYS A 271 ASP A 276 0 SHEET 2 AA 5 GLU A 260 GLN A 266 -1 O MET A 263 N ASP A 276 SHEET 3 AA 5 PHE A 357 ASP A 365 -1 O ILE A 358 N GLN A 266 SHEET 4 AA 5 THR A 336 CYS A 347 -1 O SER A 339 N ASP A 365 SHEET 5 AA 5 GLY A 321 SER A 325 -1 O ALA A 323 N CYS A 344 SHEET 1 AB 5 LYS A 271 ASP A 276 0 SHEET 2 AB 5 GLU A 260 GLN A 266 -1 O MET A 263 N ASP A 276 SHEET 3 AB 5 PHE A 357 ASP A 365 -1 O ILE A 358 N GLN A 266 SHEET 4 AB 5 THR A 336 CYS A 347 -1 O SER A 339 N ASP A 365 SHEET 5 AB 5 TYR A 328 LEU A 332 -1 O TYR A 328 N ALA A 340 SITE 1 AC1 1 SER A 274 SITE 1 AC2 5 ASP A 276 SER A 278 SER A 279 HOH A2009 SITE 2 AC2 5 HOH A2010 SITE 1 AC3 2 SER A 308 HOH A2049 SITE 1 AC4 3 HIS A 341 ARG A 343 HOH A2026 CRYST1 62.100 62.100 73.400 90.00 90.00 120.00 P 62 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016103 0.009297 0.000000 0.00000 SCALE2 0.000000 0.018594 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013624 0.00000