HEADER    VIRAL PROTEIN                           19-JUL-03   1OK8              
TITLE     CRYSTAL STRUCTURE OF THE DENGUE 2 VIRUS ENVELOPE GLYCOPROTEIN IN THE  
TITLE    2 POSTFUSION CONFORMATION                                              
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: MAJOR ENVELOPE PROTEIN E;                                  
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: SOLUBLE ECTODOMAIN, RESIDUES 281-674;                      
COMPND   5 SYNONYM: DENGUE VIRUS TYPE 2 MAJOR ENVELOPE PROTEIN E;               
COMPND   6 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: DENGUE VIRUS TYPE 2;                            
SOURCE   3 ORGANISM_TAXID: 11060;                                               
SOURCE   4 STRAIN: PR159/S1;                                                    
SOURCE   5 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER;                          
SOURCE   6 EXPRESSION_SYSTEM_TAXID: 7227;                                       
SOURCE   7 EXPRESSION_SYSTEM_CELL_LINE: SCHNEIDER 2;                            
SOURCE   8 EXPRESSION_SYSTEM_PLASMID: PMTT                                      
KEYWDS    VIRAL PROTEIN, MEMBRANE FUSION, FLAVIVIRUS, FUSION PEPTIDE, LOW-PH    
KEYWDS   2 CONFORMATIONAL CHANGE, CLASS 2 FUSION PROTEIN                        
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    Y.MODIS,S.C.HARRISON                                                  
REVDAT   6   23-OCT-24 1OK8    1       REMARK                                   
REVDAT   5   13-DEC-23 1OK8    1       HETSYN                                   
REVDAT   4   29-JUL-20 1OK8    1       COMPND REMARK HETNAM LINK                
REVDAT   4 2                   1       SITE                                     
REVDAT   3   25-JAN-12 1OK8    1       HEADER KEYWDS REMARK VERSN               
REVDAT   3 2                   1       HETSYN FORMUL SITE                       
REVDAT   2   24-FEB-09 1OK8    1       VERSN                                    
REVDAT   1   29-JAN-04 1OK8    0                                                
JRNL        AUTH   Y.MODIS,S.OGATA,D.CLEMENTS,S.C.HARRISON                      
JRNL        TITL   STRUCTURE OF THE DENGUE VIRUS ENVELOPE PROTEIN AFTER         
JRNL        TITL 2 MEMBRANE FUSION                                              
JRNL        REF    NATURE                        V. 427   313 2004              
JRNL        REFN                   ISSN 0028-0836                               
JRNL        PMID   14737159                                                     
JRNL        DOI    10.1038/NATURE02165                                          
REMARK   1                                                                      
REMARK   1 REFERENCE 1                                                          
REMARK   1  AUTH   Y.MODIS,S.OGATA,D.CLEMENTS,S.C.HARRISON                      
REMARK   1  TITL   A LIGAND-BINDING POCKET IN THE DENGUE VIRUS ENVELOPE         
REMARK   1  TITL 2 GLYCOPROTEIN                                                 
REMARK   1  REF    PROC.NATL.ACAD.SCI.USA.       V. 100  6986 2003              
REMARK   1  REFN                   ISSN 0027-8424                               
REMARK   1  PMID   12759475                                                     
REMARK   1  DOI    10.1073/PNAS.0832193100                                      
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.00 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CNS 1.0                                              
REMARK   3   AUTHORS     : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-              
REMARK   3               : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,              
REMARK   3               : READ,RICE,SIMONSON,WARREN                            
REMARK   3                                                                      
REMARK   3  REFINEMENT TARGET : NULL                                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 29.29                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   DATA CUTOFF HIGH         (ABS(F)) : 441803.910                     
REMARK   3   DATA CUTOFF LOW          (ABS(F)) : 0.0000                         
REMARK   3   COMPLETENESS (WORKING+TEST)   (%) : 91.0                           
REMARK   3   NUMBER OF REFLECTIONS             : 27450                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE            (WORKING SET) : 0.222                           
REMARK   3   FREE R VALUE                     : 0.267                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 4.800                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1322                            
REMARK   3   ESTIMATED ERROR OF FREE R VALUE  : 0.007                           
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 6                            
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 2.00                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 2.13                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 66.60                        
REMARK   3   REFLECTIONS IN BIN    (WORKING SET) : 3130                         
REMARK   3   BIN R VALUE           (WORKING SET) : 0.2730                       
REMARK   3   BIN FREE R VALUE                    : 0.3060                       
REMARK   3   BIN FREE R VALUE TEST SET SIZE  (%) : 5.30                         
REMARK   3   BIN FREE R VALUE TEST SET COUNT     : 174                          
REMARK   3   ESTIMATED ERROR OF BIN FREE R VALUE : 0.023                        
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 2962                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 15                                      
REMARK   3   SOLVENT ATOMS            : 205                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 11.30                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 30.10                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : 1.49000                                              
REMARK   3    B22 (A**2) : 1.49000                                              
REMARK   3    B33 (A**2) : -2.98000                                             
REMARK   3    B12 (A**2) : 2.18000                                              
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED COORDINATE ERROR.                                         
REMARK   3   ESD FROM LUZZATI PLOT        (A) : 0.26                            
REMARK   3   ESD FROM SIGMAA              (A) : 0.20                            
REMARK   3   LOW RESOLUTION CUTOFF        (A) : 5.00                            
REMARK   3                                                                      
REMARK   3  CROSS-VALIDATED ESTIMATED COORDINATE ERROR.                         
REMARK   3   ESD FROM C-V LUZZATI PLOT    (A) : 0.32                            
REMARK   3   ESD FROM C-V SIGMAA          (A) : 0.24                            
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES.                                   
REMARK   3   BOND LENGTHS                 (A) : 0.006                           
REMARK   3   BOND ANGLES            (DEGREES) : 1.400                           
REMARK   3   DIHEDRAL ANGLES        (DEGREES) : 26.40                           
REMARK   3   IMPROPER ANGLES        (DEGREES) : 0.820                           
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL MODEL : RESTRAINED                                
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.    RMS    SIGMA                
REMARK   3   MAIN-CHAIN BOND              (A**2) : 3.290 ; 3.000                
REMARK   3   MAIN-CHAIN ANGLE             (A**2) : 4.220 ; 4.000                
REMARK   3   SIDE-CHAIN BOND              (A**2) : 4.760 ; 5.000                
REMARK   3   SIDE-CHAIN ANGLE             (A**2) : 6.410 ; 6.000                
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELING.                                              
REMARK   3   METHOD USED : FLAT MODEL                                           
REMARK   3   KSOL        : 0.36                                                 
REMARK   3   BSOL        : 47.99                                                
REMARK   3                                                                      
REMARK   3  NCS MODEL : NULL                                                    
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS.                         RMS   SIGMA/WEIGHT          
REMARK   3   GROUP  1  POSITIONAL            (A) : NULL  ; NULL                 
REMARK   3   GROUP  1  B-FACTOR           (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  PARAMETER FILE  1  : PROTEIN_REP.PARAM                              
REMARK   3  PARAMETER FILE  2  : CARBOHYDRATE.PARAM                             
REMARK   3  PARAMETER FILE  3  : WATER_REP.PARAM                                
REMARK   3  PARAMETER FILE  4  : ION.PARAM                                      
REMARK   3  PARAMETER FILE  5  : NULL                                           
REMARK   3  TOPOLOGY FILE  1   : PROTEIN.TOP                                    
REMARK   3  TOPOLOGY FILE  2   : CARBOHYDRATE.TOP                               
REMARK   3  TOPOLOGY FILE  3   : WATER_REP.TOP                                  
REMARK   3  TOPOLOGY FILE  4   : ION.TOP                                        
REMARK   3  TOPOLOGY FILE  5   : NULL                                           
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 1OK8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-JUL-03.                  
REMARK 100 THE DEPOSITION ID IS D_1290013085.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 15-MAR-03                          
REMARK 200  TEMPERATURE           (KELVIN) : 100.0                              
REMARK 200  PH                             : 7.00                               
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : APS                                
REMARK 200  BEAMLINE                       : 14-BM-C                            
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.9                                
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : ADSC CCD                           
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : DENZO                              
REMARK 200  DATA SCALING SOFTWARE          : SCALEPACK                          
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 28677                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.000                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 50.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 95.0                               
REMARK 200  DATA REDUNDANCY                : 7.000                              
REMARK 200  R MERGE                    (I) : 0.05800                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 25.0000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.07                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 75.0                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 1.20                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.39800                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 2.000                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: AMORE, CNS                                            
REMARK 200 STARTING MODEL: PDB ENTRY 1OAM                                       
REMARK 200                                                                      
REMARK 200 REMARK: THE THREE DOMAINS OF 1OAM WERE PLACED SEQUENTIALLY IN THE    
REMARK 200  FOLLOWING ORDER: DOMAIN II, DOMAIN I, DOMAIN III.                   
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 49.00                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 20-30% PEG 400, 0.08 M NACL, 0.1 M       
REMARK 280  MOPS PH 7-8., PH 7.00                                               
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 3 2 1                          
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -Y,X-Y,Z                                                
REMARK 290       3555   -X+Y,-X,Z                                               
REMARK 290       4555   Y,X,-Z                                                  
REMARK 290       5555   X-Y,-Y,-Z                                               
REMARK 290       6555   -X,-X+Y,-Z                                              
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   3 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   3 -0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   4 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   4  0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   5  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   5  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   5  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   6 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   6 -0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   6  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC                          
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC                   
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 12630 ANGSTROM**2                         
REMARK 350 SURFACE AREA OF THE COMPLEX: 46840 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.1 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350   BIOMT1   2 -0.500000  0.866025  0.000000      -38.07550            
REMARK 350   BIOMT2   2 -0.866025 -0.500000  0.000000       65.94870            
REMARK 350   BIOMT3   2  0.000000  0.000000  1.000000        0.00000            
REMARK 350   BIOMT1   3 -0.500000 -0.866025  0.000000       38.07550            
REMARK 350   BIOMT2   3  0.866025 -0.500000  0.000000       65.94870            
REMARK 350   BIOMT3   3  0.000000  0.000000  1.000000        0.00000            
REMARK 375                                                                      
REMARK 375 SPECIAL POSITION                                                     
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS            
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL          
REMARK 375 POSITIONS.                                                           
REMARK 375                                                                      
REMARK 375 ATOM RES CSSEQI                                                      
REMARK 375 CL    CL A1396  LIES ON A SPECIAL POSITION.                          
REMARK 375      HOH A2099  LIES ON A SPECIAL POSITION.                          
REMARK 375      HOH A2137  LIES ON A SPECIAL POSITION.                          
REMARK 375      HOH A2149  LIES ON A SPECIAL POSITION.                          
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     SER A   145                                                      
REMARK 465     GLY A   146                                                      
REMARK 465     GLU A   147                                                      
REMARK 465     GLU A   148                                                      
REMARK 465     HIS A   149                                                      
REMARK 465     ALA A   150                                                      
REMARK 465     VAL A   151                                                      
REMARK 465     GLY A   152                                                      
REMARK 465     ASN A   153                                                      
REMARK 465     ASP A   154                                                      
REMARK 465     THR A   155                                                      
REMARK 465     GLY A   156                                                      
REMARK 465     LYS A   157                                                      
REMARK 465     HIS A   158                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   O    GLY A   281     O    HOH A  2147              2.19            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    CYS A  30   CA  -  CB  -  SG  ANGL. DEV. =   9.9 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    THR A  76       -4.45     69.78                                   
REMARK 500    LYS A  88       -9.08    -59.99                                   
REMARK 500    LYS A 202     -123.94     55.60                                   
REMARK 500    ASN A 230       54.57    -95.30                                   
REMARK 500    SER A 274       78.85     45.68                                   
REMARK 500    LEU A 342      -31.57    -39.60                                   
REMARK 500    GLU A 343     -100.36    -88.27                                   
REMARK 500    LYS A 344       14.15   -160.33                                   
REMARK 500    ARG A 350       -7.90     80.02                                   
REMARK 500    GLU A 383      -43.38    -27.04                                   
REMARK 500    PRO A 384       85.62    -60.84                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 650                                                                      
REMARK 650 HELIX                                                                
REMARK 650 DETERMINATION METHOD: AUTHOR PROVIDED.                               
REMARK 700                                                                      
REMARK 700 SHEET                                                                
REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN               
REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW,          
REMARK 700 TWO SHEETS ARE DEFINED.                                              
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1L9K   RELATED DB: PDB                                   
REMARK 900 DENGUE METHYLTRANSFERASE                                             
REMARK 900 RELATED ID: 1OAM   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF THE DENGUE 2 VIRUS ENVELOPE PROTEIN IN COMPLEX  
REMARK 900 WITH N-OCTYL- BETA-D-GLUCOSIDE                                       
REMARK 900 RELATED ID: 1OAN   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF THE DENGUE 2 VIRUS ENVELOPE PROTEIN             
REMARK 999                                                                      
REMARK 999 SEQUENCE                                                             
REMARK 999 RESIDUES 100-108 FORM THE GLYCINE-RICH, HYDROPHOBIC FUSION           
REMARK 999 PEPTIDE (ALLISON ET AL., J.VIROL. 75, 4268-75 (2001))                
REMARK 999                                                                      
REMARK 999 THE MOLECULE CRYSTALLIZED LACKS THE LAST 101 RESIDUES OF E,          
REMARK 999 INCLUDING THE C-TERMINAL VIRAL TRANSMEMBRANE DOMAIN.                 
DBREF  1OK8 A    1   394  UNP    P12823   POLG_DEN2P     281    674             
SEQADV 1OK8 GLU A   71  UNP  P12823    ASP   351 CONFLICT                       
SEQADV 1OK8 ASN A  390  UNP  P12823    ASP   670 CONFLICT                       
SEQRES   1 A  394  MET ARG CYS ILE GLY ILE SER ASN ARG ASP PHE VAL GLU          
SEQRES   2 A  394  GLY VAL SER GLY GLY SER TRP VAL ASP ILE VAL LEU GLU          
SEQRES   3 A  394  HIS GLY SER CYS VAL THR THR MET ALA LYS ASN LYS PRO          
SEQRES   4 A  394  THR LEU ASP PHE GLU LEU ILE LYS THR GLU ALA LYS GLN          
SEQRES   5 A  394  PRO ALA THR LEU ARG LYS TYR CYS ILE GLU ALA LYS LEU          
SEQRES   6 A  394  THR ASN THR THR THR GLU SER ARG CYS PRO THR GLN GLY          
SEQRES   7 A  394  GLU PRO THR LEU ASN GLU GLU GLN ASP LYS ARG PHE VAL          
SEQRES   8 A  394  CYS LYS HIS SER MET VAL ASP ARG GLY TRP GLY ASN GLY          
SEQRES   9 A  394  CYS GLY LEU PHE GLY LYS GLY GLY ILE VAL THR CYS ALA          
SEQRES  10 A  394  MET PHE THR CYS LYS LYS ASN MET GLU GLY LYS ILE VAL          
SEQRES  11 A  394  GLN PRO GLU ASN LEU GLU TYR THR VAL VAL ILE THR PRO          
SEQRES  12 A  394  HIS SER GLY GLU GLU HIS ALA VAL GLY ASN ASP THR GLY          
SEQRES  13 A  394  LYS HIS GLY LYS GLU VAL LYS ILE THR PRO GLN SER SER          
SEQRES  14 A  394  ILE THR GLU ALA GLU LEU THR GLY TYR GLY THR VAL THR          
SEQRES  15 A  394  MET GLU CYS SER PRO ARG THR GLY LEU ASP PHE ASN GLU          
SEQRES  16 A  394  MET VAL LEU LEU GLN MET LYS ASP LYS ALA TRP LEU VAL          
SEQRES  17 A  394  HIS ARG GLN TRP PHE LEU ASP LEU PRO LEU PRO TRP LEU          
SEQRES  18 A  394  PRO GLY ALA ASP THR GLN GLY SER ASN TRP ILE GLN LYS          
SEQRES  19 A  394  GLU THR LEU VAL THR PHE LYS ASN PRO HIS ALA LYS LYS          
SEQRES  20 A  394  GLN ASP VAL VAL VAL LEU GLY SER GLN GLU GLY ALA MET          
SEQRES  21 A  394  HIS THR ALA LEU THR GLY ALA THR GLU ILE GLN MET SER          
SEQRES  22 A  394  SER GLY ASN LEU LEU PHE THR GLY HIS LEU LYS CYS ARG          
SEQRES  23 A  394  LEU ARG MET ASP LYS LEU GLN LEU LYS GLY MET SER TYR          
SEQRES  24 A  394  SER MET CYS THR GLY LYS PHE LYS VAL VAL LYS GLU ILE          
SEQRES  25 A  394  ALA GLU THR GLN HIS GLY THR ILE VAL ILE ARG VAL GLN          
SEQRES  26 A  394  TYR GLU GLY ASP GLY SER PRO CYS LYS ILE PRO PHE GLU          
SEQRES  27 A  394  ILE MET ASP LEU GLU LYS ARG HIS VAL LEU GLY ARG LEU          
SEQRES  28 A  394  ILE THR VAL ASN PRO ILE VAL THR GLU LYS ASP SER PRO          
SEQRES  29 A  394  VAL ASN ILE GLU ALA GLU PRO PRO PHE GLY ASP SER TYR          
SEQRES  30 A  394  ILE ILE ILE GLY VAL GLU PRO GLY GLN LEU LYS LEU ASN          
SEQRES  31 A  394  TRP PHE LYS LYS                                              
MODRES 1OK8 ASN A   67  ASN  GLYCOSYLATION SITE                                 
HET    NAG  A1395      14                                                       
HET     CL  A1396       1                                                       
HETNAM     NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE                         
HETNAM      CL CHLORIDE ION                                                     
HETSYN     NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA-           
HETSYN   2 NAG  D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO-          
HETSYN   3 NAG  2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE                         
FORMUL   2  NAG    C8 H15 N O6                                                  
FORMUL   3   CL    CL 1-                                                        
FORMUL   4  HOH   *205(H2 O)                                                    
HELIX    1   2 LEU A   82  ASP A   87  5                                   6    
HELIX    2   5 ARG A  210  ASP A  215  1                                   6    
HELIX    3   7 GLN A  256  LEU A  264  1                                   9    
SHEET    1  AA 5 ILE A   4  GLY A   5  0                                        
SHEET    2  AA 5 VAL A  31  MET A  34  1  N  THR A  32   O  ILE A   4           
SHEET    3  AA 5 THR A  40  LYS A  51 -1  O  LEU A  41   N  THR A  33           
SHEET    4  AA 5 LEU A 135  HIS A 144 -1  O  GLU A 136   N  GLU A  49           
SHEET    5  AA 5 LYS A 160  ILE A 164 -1  O  LYS A 160   N  ILE A 141           
SHEET    1  AB 4 ILE A   4  GLY A   5  0                                        
SHEET    2  AB 4 VAL A  31  MET A  34  1  N  THR A  32   O  ILE A   4           
SHEET    3  AB 4 THR A  40  LYS A  51 -1  O  LEU A  41   N  THR A  33           
SHEET    4  AB 4 ASN A 276  PHE A 279 -1  O  LEU A 277   N  ALA A  50           
SHEET    1  AC 5 PHE A  11  GLU A  13  0                                        
SHEET    2  AC 5 GLY A  18  GLU A  26 -1  O  TRP A  20   N  VAL A  12           
SHEET    3  AC 5 HIS A 282  ASP A 290 -1  O  LEU A 283   N  LEU A  25           
SHEET    4  AC 5 GLY A 179  PRO A 187 -1  O  THR A 182   N  ARG A 288           
SHEET    5  AC 5 ILE A 170  LEU A 175 -1  O  THR A 171   N  MET A 183           
SHEET    1  AD 4 PHE A  90  ARG A  99  0                                        
SHEET    2  AD 4 GLY A 109  ILE A 129 -1  O  GLY A 109   N  ARG A  99           
SHEET    3  AD 4 ALA A  54  SER A  72 -1  O  ALA A  54   N  ILE A 129           
SHEET    4  AD 4 TRP A 220  PRO A 222 -1  O  LEU A 221   N  LYS A  58           
SHEET    1  AE 5 PHE A  90  ARG A  99  0                                        
SHEET    2  AE 5 GLY A 109  ILE A 129 -1  O  GLY A 109   N  ARG A  99           
SHEET    3  AE 5 MET A 196  MET A 201 -1  O  LEU A 198   N  LYS A 128           
SHEET    4  AE 5 LYS A 204  HIS A 209 -1  O  LYS A 204   N  MET A 201           
SHEET    5  AE 5 THR A 268  ILE A 270 -1  O  THR A 268   N  LEU A 207           
SHEET    1  AF 2 VAL A 238  PHE A 240  0                                        
SHEET    2  AF 2 VAL A 250  VAL A 252 -1  O  VAL A 251   N  THR A 239           
SHEET    1  AG 3 PHE A 306  GLU A 314  0                                        
SHEET    2  AG 3 ILE A 320  TYR A 326 -1  O  VAL A 321   N  ALA A 313           
SHEET    3  AG 3 VAL A 365  ALA A 369 -1  O  VAL A 365   N  VAL A 324           
SHEET    1  AH 2 CYS A 333  LYS A 334  0                                        
SHEET    2  AH 2 ILE A 357  VAL A 358 -1  O  VAL A 358   N  CYS A 333           
SHEET    1  AI 3 PHE A 337  ASP A 341  0                                        
SHEET    2  AI 3 GLY A 374  ILE A 380 -1  O  TYR A 377   N  MET A 340           
SHEET    3  AI 3 LEU A 387  LYS A 393 -1  O  LEU A 387   N  ILE A 380           
SSBOND   1 CYS A    3    CYS A   30                          1555   1555  2.03  
SSBOND   2 CYS A   60    CYS A  121                          1555   1555  2.05  
SSBOND   3 CYS A   74    CYS A  105                          1555   1555  2.04  
SSBOND   4 CYS A   92    CYS A  116                          1555   1555  2.04  
SSBOND   5 CYS A  185    CYS A  285                          1555   1555  2.05  
SSBOND   6 CYS A  302    CYS A  333                          1555   1555  2.04  
LINK         ND2 ASN A  67                 C1  NAG A1395     1555   1555  1.45  
CISPEP   1 SER A  331    PRO A  332          0         0.60                     
CRYST1   76.151   76.151  130.775  90.00  90.00 120.00 P 3 2 1       6          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.013132  0.007582  0.000000        0.00000                         
SCALE2      0.000000  0.015163  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.007647        0.00000