data_1OO9 # _entry.id 1OO9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1OO9 pdb_00001oo9 10.2210/pdb1oo9/pdb RCSB RCSB018496 ? ? WWPDB D_1000018496 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1UEA _pdbx_database_related.details 'Crystal structure of MMP-3 with full length TIMP-1.' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1OO9 _pdbx_database_status.recvd_initial_deposition_date 2003-03-03 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Arumugam, S.' 1 'Van Doren, S.R.' 2 # _citation.id primary _citation.title 'Global Orientation of Bound MMP-3 and N-TIMP-1 in Solution via Residual Dipolar Couplings' _citation.journal_abbrev Biochemistry _citation.journal_volume 42 _citation.page_first 7950 _citation.page_last 7958 _citation.year 2003 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12834347 _citation.pdbx_database_id_DOI 10.1021/bi034545s # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Arumugam, S.' 1 ? primary 'Van Doren, S.R.' 2 ? # _cell.entry_id 1OO9 _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1OO9 _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Stromelysin-1 18887.029 1 3.4.24.17 ? 'CATALYTIC DOMAIN' ? 2 polymer man 'Metalloproteinase inhibitor 1' 14269.307 1 ? ? 'N-TERMINAL DOMAIN' ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Matrix metalloproteinase-3, MMP-3, Transin-1, SL-1' 2 ;TIMP-1, Erythroid potentiating activity, EPA, Tissue inhibitor of metalloproteinases, Fibroblast collagenase inhibitor, Collagenase inhibitor ; # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;FRTFPGIPKWRKTHLTYRIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFYPFDGPGN VLAHAYAPGPGINGDAHFDDDEQWTKDTTGTNLFLVAAHEIGHSLGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGI QSLYGPPP ; ;FRTFPGIPKWRKTHLTYRIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFYPFDGPGN VLAHAYAPGPGINGDAHFDDDEQWTKDTTGTNLFLVAAHEIGHSLGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGI QSLYGPPP ; A ? 2 'polypeptide(L)' no no ;CTCVPPHPQTAFCNSDLVIRAKFVGTPEVNQTTLYQRYEIKMTKMYKGFQALGDAADIRFVYTPAMESVCGYFHRSHNRS EEFLIAGKLQDGLLHITTCSFVAPWNSLSLAQRRGFTKTYTVGCEE ; ;CTCVPPHPQTAFCNSDLVIRAKFVGTPEVNQTTLYQRYEIKMTKMYKGFQALGDAADIRFVYTPAMESVCGYFHRSHNRS EEFLIAGKLQDGLLHITTCSFVAPWNSLSLAQRRGFTKTYTVGCEE ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PHE n 1 2 ARG n 1 3 THR n 1 4 PHE n 1 5 PRO n 1 6 GLY n 1 7 ILE n 1 8 PRO n 1 9 LYS n 1 10 TRP n 1 11 ARG n 1 12 LYS n 1 13 THR n 1 14 HIS n 1 15 LEU n 1 16 THR n 1 17 TYR n 1 18 ARG n 1 19 ILE n 1 20 VAL n 1 21 ASN n 1 22 TYR n 1 23 THR n 1 24 PRO n 1 25 ASP n 1 26 LEU n 1 27 PRO n 1 28 LYS n 1 29 ASP n 1 30 ALA n 1 31 VAL n 1 32 ASP n 1 33 SER n 1 34 ALA n 1 35 VAL n 1 36 GLU n 1 37 LYS n 1 38 ALA n 1 39 LEU n 1 40 LYS n 1 41 VAL n 1 42 TRP n 1 43 GLU n 1 44 GLU n 1 45 VAL n 1 46 THR n 1 47 PRO n 1 48 LEU n 1 49 THR n 1 50 PHE n 1 51 SER n 1 52 ARG n 1 53 LEU n 1 54 TYR n 1 55 GLU n 1 56 GLY n 1 57 GLU n 1 58 ALA n 1 59 ASP n 1 60 ILE n 1 61 MET n 1 62 ILE n 1 63 SER n 1 64 PHE n 1 65 ALA n 1 66 VAL n 1 67 ARG n 1 68 GLU n 1 69 HIS n 1 70 GLY n 1 71 ASP n 1 72 PHE n 1 73 TYR n 1 74 PRO n 1 75 PHE n 1 76 ASP n 1 77 GLY n 1 78 PRO n 1 79 GLY n 1 80 ASN n 1 81 VAL n 1 82 LEU n 1 83 ALA n 1 84 HIS n 1 85 ALA n 1 86 TYR n 1 87 ALA n 1 88 PRO n 1 89 GLY n 1 90 PRO n 1 91 GLY n 1 92 ILE n 1 93 ASN n 1 94 GLY n 1 95 ASP n 1 96 ALA n 1 97 HIS n 1 98 PHE n 1 99 ASP n 1 100 ASP n 1 101 ASP n 1 102 GLU n 1 103 GLN n 1 104 TRP n 1 105 THR n 1 106 LYS n 1 107 ASP n 1 108 THR n 1 109 THR n 1 110 GLY n 1 111 THR n 1 112 ASN n 1 113 LEU n 1 114 PHE n 1 115 LEU n 1 116 VAL n 1 117 ALA n 1 118 ALA n 1 119 HIS n 1 120 GLU n 1 121 ILE n 1 122 GLY n 1 123 HIS n 1 124 SER n 1 125 LEU n 1 126 GLY n 1 127 LEU n 1 128 PHE n 1 129 HIS n 1 130 SER n 1 131 ALA n 1 132 ASN n 1 133 THR n 1 134 GLU n 1 135 ALA n 1 136 LEU n 1 137 MET n 1 138 TYR n 1 139 PRO n 1 140 LEU n 1 141 TYR n 1 142 HIS n 1 143 SER n 1 144 LEU n 1 145 THR n 1 146 ASP n 1 147 LEU n 1 148 THR n 1 149 ARG n 1 150 PHE n 1 151 ARG n 1 152 LEU n 1 153 SER n 1 154 GLN n 1 155 ASP n 1 156 ASP n 1 157 ILE n 1 158 ASN n 1 159 GLY n 1 160 ILE n 1 161 GLN n 1 162 SER n 1 163 LEU n 1 164 TYR n 1 165 GLY n 1 166 PRO n 1 167 PRO n 1 168 PRO n 2 1 CYS n 2 2 THR n 2 3 CYS n 2 4 VAL n 2 5 PRO n 2 6 PRO n 2 7 HIS n 2 8 PRO n 2 9 GLN n 2 10 THR n 2 11 ALA n 2 12 PHE n 2 13 CYS n 2 14 ASN n 2 15 SER n 2 16 ASP n 2 17 LEU n 2 18 VAL n 2 19 ILE n 2 20 ARG n 2 21 ALA n 2 22 LYS n 2 23 PHE n 2 24 VAL n 2 25 GLY n 2 26 THR n 2 27 PRO n 2 28 GLU n 2 29 VAL n 2 30 ASN n 2 31 GLN n 2 32 THR n 2 33 THR n 2 34 LEU n 2 35 TYR n 2 36 GLN n 2 37 ARG n 2 38 TYR n 2 39 GLU n 2 40 ILE n 2 41 LYS n 2 42 MET n 2 43 THR n 2 44 LYS n 2 45 MET n 2 46 TYR n 2 47 LYS n 2 48 GLY n 2 49 PHE n 2 50 GLN n 2 51 ALA n 2 52 LEU n 2 53 GLY n 2 54 ASP n 2 55 ALA n 2 56 ALA n 2 57 ASP n 2 58 ILE n 2 59 ARG n 2 60 PHE n 2 61 VAL n 2 62 TYR n 2 63 THR n 2 64 PRO n 2 65 ALA n 2 66 MET n 2 67 GLU n 2 68 SER n 2 69 VAL n 2 70 CYS n 2 71 GLY n 2 72 TYR n 2 73 PHE n 2 74 HIS n 2 75 ARG n 2 76 SER n 2 77 HIS n 2 78 ASN n 2 79 ARG n 2 80 SER n 2 81 GLU n 2 82 GLU n 2 83 PHE n 2 84 LEU n 2 85 ILE n 2 86 ALA n 2 87 GLY n 2 88 LYS n 2 89 LEU n 2 90 GLN n 2 91 ASP n 2 92 GLY n 2 93 LEU n 2 94 LEU n 2 95 HIS n 2 96 ILE n 2 97 THR n 2 98 THR n 2 99 CYS n 2 100 SER n 2 101 PHE n 2 102 VAL n 2 103 ALA n 2 104 PRO n 2 105 TRP n 2 106 ASN n 2 107 SER n 2 108 LEU n 2 109 SER n 2 110 LEU n 2 111 ALA n 2 112 GLN n 2 113 ARG n 2 114 ARG n 2 115 GLY n 2 116 PHE n 2 117 THR n 2 118 LYS n 2 119 THR n 2 120 TYR n 2 121 THR n 2 122 VAL n 2 123 GLY n 2 124 CYS n 2 125 GLU n 2 126 GLU n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? human Homo 'MMP3 OR STMY1' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 Escherichia ? ? 'Escherichia coli' ? ? 'BL21(DE3)' ? ? ? ? ? ? ? plasmid ? ? ? 'pGEMEX-MMP-3(DC)E202Q' ? ? 2 1 sample ? ? ? human Homo 'TIMP1 OR TIMP OR CLGI' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 Escherichia ? ? 'Escherichia coli' ? ? 'BL21(DE3)' ? ? ? ? ? ? ? plasmid ? ? ? pET3a-N-TIMP-1 ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP MMP3_HUMAN P08254 1 ;FRTFPGIPKWRKTHLTYRIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFYPFDGPGN VLAHAYAPGPGINGDAHFDDDEQWTKDTTGTNLFLVAAHEIGHSLGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGI QSLYGPPP ; 100 ? 2 UNP TIMP1_HUMAN P01033 2 ;CTCVPPHPQTAFCNSDLVIRAKFVGTPEVNQTTLYQRYEIKMTKMYKGFQALGDAADIRFVYTPAMESVCGYFHRSHNRS EEFLIAGKLQDGLLHITTCSFVAPWNSLSLAQRRGFTKTYTVGCEE ; 24 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1OO9 A 1 ? 168 ? P08254 100 ? 267 ? 83 250 2 2 1OO9 B 1 ? 126 ? P01033 24 ? 149 ? 301 426 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 '15N-separated NOESY; HNCA; HNCO; HN(CO)CA' 2 1 1 'HCCH-TOCSY; HCCH-COSY;' 3 3 2 '15N-separated NOESY; HNCA; HNCO; HN(CO)CA' 4 4 2 '15N-separated NOESY' 5 2 1 '15N-separated NOESY' 6 5 2 '15N-separated NOESY' 7 6 2 'coupled 15N-HSQC; coupled 13C-HSQC; Ha-coupled HNCA' # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.temperature_units 1 310 ambient 6.6 '20mM Tris-d11; 100 mM NaCl; 15 mM CaCl2; 3uM ZnCl2; 1mM Sodium Azide' ? K 2 307 ambient 6.7 '20mM Tris-d11; 125mM NaCl; 15 mM CaCl2; 50uM ZnCl2;1mM Sodium Azide' ? K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system 1 ;0.8mM MMP-3 U-15N, 13C; 0.8mM N-TIMP-1; 20mM Tris-d11; 100 mM NaCl; 15 mM CaCl2; 3uM ZnCl2; 1mM Sodium Azide; 93% H2O, 7% D2O ; '93% H2O/7% D2O' 2 ;0.5mM MMP-3 U-2H, 15N; 0.5mM N-TIMP-1; 20mM Tris-d11; 100 mM NaCl; 15 mM CaCl2; 3uM ZnCl2; 1mM Sodium Azide; 93% H2O, 7% D2O ; '93% H2O/7% D2O' 3 ;0.66mM N-TIMP-1 U-15N, 13C; 0.66mM MMP-3(E202Q); 20mM Tris-d11; 125mM NaCl; 15 mM CaCl2; 50uM ZnCl2; 1mM Sodium Azide; 93% H2O; 7% D2O ; '93% H2O/7% D2O' 4 ;0.3mM 98% 2H/15N N-TIMP-1; 0.3mM MMP-3 (E202Q); 20mM Tris-d11; 125mM NaCl; 15 mM CaCl2; 50uM ZnCl2; 1mM Sodium Azide; 93% H2O; 7% D2O ; '93% H2O/7% D2O' 5 ;0.3mM 98% 2H/15N N-TIMP-1; 0.3mM (15N-IV, 15N, 13C-L)MMP-3(E202Q); 20mM Tris-d11; 125mM NaCl; 15 mM CaCl2; 50uM ZnCl2; 1mM Sodium Azide; 93% H2O; 7% D2O ; '93% H2O/7% D2O' 6 ;0.3mM 98% 2H/15N N-TIMP-1; 0.3mM (15N-IV, 15N, 13C-L)MMP-3(E202Q); 20mM Tris-d11; 125mM NaCl; 15 mM CaCl2; 50uM ZnCl2; 1mM Sodium Azide; 93% H2O; 7% D2O 5% PEG(C12E6)/1-hexanol ; ;93% H2O; 7% D2O 5% PEG(C12E6)/1-hexanol ; # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.field_strength 1 ? Bruker DRX 500 2 ? Varian UNITYPLUS 720 3 ? Bruker DRX 750 4 ? Varian INOVA 600 # _pdbx_nmr_refine.entry_id 1OO9 _pdbx_nmr_refine.method 'RIGID BODY MINIMIZATION FOLLOWED BY RESTRAINED SIMULATED ANNEALING' _pdbx_nmr_refine.details ;STRUCTURES WERE CALCULATED USING XPLOR-NIH. REFINEMENTS WERE CARRIED OUT FIRST BY RIGID BODY MINIMIZATION (CLORE(2000) PROC.NATL.ACAD.SCI. 97, 9021-9025) FOLLOWED BY RESTRAINED SIMULATED ANNEALING (WANG ET AL. EMBO J. (2000) 19,5635-5649). THE CRYSTAL STRUCTURE OF THE COMPLEX BY BODE ET AL. (NATURE (1997), 389, 77-81; PDB CODE: 1UEA) HAS BEEN USED AS A STARTING POINT WITH PROTONS ATTACHED AND TAKING ONLY N-TERMINAL 126 RESIDUES OF TIMP-1. INTERFACIAL SIDE CHAINS OF THE FOLLOWING RESIDUES WERE ALLOWED TO BE FLEXIBLE: CHAIN A (MMP-3(DC)): 162-169,198-202, 205-206, 211 AND 221-223; CHAIN B (N-TIMP-1): 302-304, 329, 333-335,366-369; A TOTAL OF 49 NOE (46 INTERMOLECULAR AND 3 INTRAMOLECULAR) 75 NH DIPOLAR COULINGS FOR N-TIMP-1, 19 NH DIPOLAR COUPLINGS AND 8 CaHa DIPOLAR COUPLINGS FOR MMP-3 WERE USED FOR REFINEMENT. TARGET FUNCTIONS INCLUDE TERMS FOR NOE RESTRAINTS, DIPOLAR COUPLING RESTRAINTS AND RADIUS OF GYRATION. ALSO, MODULE ( DOSSET ET AL. J. BIOMOL. NMR, (2001),20,223-231) AND PALES (ZWECKSTETTER AND BAX, J. AM. CHEM. SOC (2000), 122, 3791-3792) WERE USED FOR EVALUATING THE ORIENTATION AND STRUCTURES. ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1OO9 _pdbx_nmr_ensemble.conformers_calculated_total_number 25 _pdbx_nmr_ensemble.conformers_submitted_total_number 1 _pdbx_nmr_ensemble.conformer_selection_criteria 'lowest energy structure' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal XPLOR NIH refinement BRUNGER 1 PALES 'SGI Irix 6.2' 'data analysis' 'ZWECKSTETTER AND BAX' 2 Module 1.0 'data analysis' 'DOSSET ET AL' 3 # _exptl.entry_id 1OO9 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1OO9 _struct.title 'Orientation in Solution of MMP-3 Catalytic Domain and N-TIMP-1 from Residual Dipolar Couplings' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1OO9 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'PROTEIN-PROTEIN COMPLEX, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 27 ? GLU A 44 ? PRO A 109 GLU A 126 1 ? 18 HELX_P HELX_P2 2 LEU A 113 ? LEU A 125 ? LEU A 195 LEU A 207 1 ? 13 HELX_P HELX_P3 3 ASP A 146 ? PHE A 150 ? ASP A 228 PHE A 232 5 ? 5 HELX_P HELX_P4 4 SER A 153 ? GLY A 165 ? SER A 235 GLY A 247 1 ? 13 HELX_P HELX_P5 5 HIS B 7 ? SER B 15 ? HIS B 307 SER B 315 1 ? 9 HELX_P HELX_P6 6 MET B 66 ? CYS B 70 ? MET B 366 CYS B 370 5 ? 5 HELX_P HELX_P7 7 ASN B 106 ? LEU B 108 ? ASN B 406 LEU B 408 5 ? 3 HELX_P HELX_P8 8 SER B 109 ? LYS B 118 ? SER B 409 LYS B 418 1 ? 10 HELX_P HELX_P9 9 THR B 119 ? GLU B 125 ? THR B 419 GLU B 425 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? B CYS 1 SG ? ? ? 1_555 B CYS 70 SG ? ? B CYS 301 B CYS 370 1_555 ? ? ? ? ? ? ? 2.057 ? ? disulf2 disulf ? ? B CYS 3 SG ? ? ? 1_555 B CYS 99 SG ? ? B CYS 303 B CYS 399 1_555 ? ? ? ? ? ? ? 2.062 ? ? disulf3 disulf ? ? B CYS 13 SG ? ? ? 1_555 B CYS 124 SG ? ? B CYS 313 B CYS 424 1_555 ? ? ? ? ? ? ? 2.031 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 2 ? C ? 9 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel C 6 7 ? anti-parallel C 7 8 ? anti-parallel C 8 9 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 49 ? ARG A 52 ? THR A 131 ARG A 134 A 2 HIS A 14 ? ILE A 19 ? HIS A 96 ILE A 101 A 3 ILE A 60 ? ALA A 65 ? ILE A 142 ALA A 147 A 4 ALA A 96 ? ASP A 99 ? ALA A 178 ASP A 181 A 5 VAL A 81 ? ALA A 85 ? VAL A 163 ALA A 167 A 6 THR B 2 ? CYS B 3 ? THR B 302 CYS B 303 B 1 TRP A 104 ? THR A 105 ? TRP A 186 THR A 187 B 2 THR A 111 ? ASN A 112 ? THR A 193 ASN A 194 C 1 VAL B 102 ? PRO B 104 ? VAL B 402 PRO B 404 C 2 PHE B 83 ? GLN B 90 ? PHE B 383 GLN B 390 C 3 LEU B 93 ? HIS B 95 ? LEU B 393 HIS B 395 C 4 PHE B 60 ? PRO B 64 ? PHE B 360 PRO B 364 C 5 TYR B 35 ? LYS B 47 ? TYR B 335 LYS B 347 C 6 GLU B 28 ? VAL B 29 ? GLU B 328 VAL B 329 C 7 TYR B 35 ? LYS B 47 ? TYR B 335 LYS B 347 C 8 LEU B 17 ? PHE B 23 ? LEU B 317 PHE B 323 C 9 PHE B 83 ? GLN B 90 ? PHE B 383 GLN B 390 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O THR A 49 ? O THR A 131 N LEU A 15 ? N LEU A 97 A 2 3 N ARG A 18 ? N ARG A 100 O ILE A 60 ? O ILE A 142 A 3 4 N SER A 63 ? N SER A 145 O ALA A 96 ? O ALA A 178 A 4 5 N ASP A 99 ? N ASP A 181 O LEU A 82 ? O LEU A 164 A 5 6 O ALA A 83 ? O ALA A 165 N THR B 2 ? N THR B 302 B 1 2 N THR A 105 ? N THR A 187 O THR A 111 ? O THR A 193 C 1 2 O ALA B 103 ? O ALA B 403 N LEU B 84 ? N LEU B 384 C 2 3 O GLN B 90 ? O GLN B 390 N LEU B 93 ? N LEU B 393 C 3 4 N LEU B 94 ? N LEU B 394 O PHE B 60 ? O PHE B 360 C 4 5 O THR B 63 ? O THR B 363 N GLN B 36 ? N GLN B 336 C 5 6 N ARG B 37 ? N ARG B 337 O GLU B 28 ? O GLU B 328 C 6 7 O GLU B 28 ? O GLU B 328 N ARG B 37 ? N ARG B 337 C 7 8 N TYR B 46 ? N TYR B 346 O VAL B 18 ? O VAL B 318 C 8 9 O ALA B 21 ? O ALA B 321 N PHE B 83 ? N PHE B 383 # _database_PDB_matrix.entry_id 1OO9 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1OO9 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PHE 1 83 83 PHE PHE A . n A 1 2 ARG 2 84 84 ARG ARG A . n A 1 3 THR 3 85 85 THR THR A . n A 1 4 PHE 4 86 86 PHE PHE A . n A 1 5 PRO 5 87 87 PRO PRO A . n A 1 6 GLY 6 88 88 GLY GLY A . n A 1 7 ILE 7 89 89 ILE ILE A . n A 1 8 PRO 8 90 90 PRO PRO A . n A 1 9 LYS 9 91 91 LYS LYS A . n A 1 10 TRP 10 92 92 TRP TRP A . n A 1 11 ARG 11 93 93 ARG ARG A . n A 1 12 LYS 12 94 94 LYS LYS A . n A 1 13 THR 13 95 95 THR THR A . n A 1 14 HIS 14 96 96 HIS HIS A . n A 1 15 LEU 15 97 97 LEU LEU A . n A 1 16 THR 16 98 98 THR THR A . n A 1 17 TYR 17 99 99 TYR TYR A . n A 1 18 ARG 18 100 100 ARG ARG A . n A 1 19 ILE 19 101 101 ILE ILE A . n A 1 20 VAL 20 102 102 VAL VAL A . n A 1 21 ASN 21 103 103 ASN ASN A . n A 1 22 TYR 22 104 104 TYR TYR A . n A 1 23 THR 23 105 105 THR THR A . n A 1 24 PRO 24 106 106 PRO PRO A . n A 1 25 ASP 25 107 107 ASP ASP A . n A 1 26 LEU 26 108 108 LEU LEU A . n A 1 27 PRO 27 109 109 PRO PRO A . n A 1 28 LYS 28 110 110 LYS LYS A . n A 1 29 ASP 29 111 111 ASP ASP A . n A 1 30 ALA 30 112 112 ALA ALA A . n A 1 31 VAL 31 113 113 VAL VAL A . n A 1 32 ASP 32 114 114 ASP ASP A . n A 1 33 SER 33 115 115 SER SER A . n A 1 34 ALA 34 116 116 ALA ALA A . n A 1 35 VAL 35 117 117 VAL VAL A . n A 1 36 GLU 36 118 118 GLU GLU A . n A 1 37 LYS 37 119 119 LYS LYS A . n A 1 38 ALA 38 120 120 ALA ALA A . n A 1 39 LEU 39 121 121 LEU LEU A . n A 1 40 LYS 40 122 122 LYS LYS A . n A 1 41 VAL 41 123 123 VAL VAL A . n A 1 42 TRP 42 124 124 TRP TRP A . n A 1 43 GLU 43 125 125 GLU GLU A . n A 1 44 GLU 44 126 126 GLU GLU A . n A 1 45 VAL 45 127 127 VAL VAL A . n A 1 46 THR 46 128 128 THR THR A . n A 1 47 PRO 47 129 129 PRO PRO A . n A 1 48 LEU 48 130 130 LEU LEU A . n A 1 49 THR 49 131 131 THR THR A . n A 1 50 PHE 50 132 132 PHE PHE A . n A 1 51 SER 51 133 133 SER SER A . n A 1 52 ARG 52 134 134 ARG ARG A . n A 1 53 LEU 53 135 135 LEU LEU A . n A 1 54 TYR 54 136 136 TYR TYR A . n A 1 55 GLU 55 137 137 GLU GLU A . n A 1 56 GLY 56 138 138 GLY GLY A . n A 1 57 GLU 57 139 139 GLU GLU A . n A 1 58 ALA 58 140 140 ALA ALA A . n A 1 59 ASP 59 141 141 ASP ASP A . n A 1 60 ILE 60 142 142 ILE ILE A . n A 1 61 MET 61 143 143 MET MET A . n A 1 62 ILE 62 144 144 ILE ILE A . n A 1 63 SER 63 145 145 SER SER A . n A 1 64 PHE 64 146 146 PHE PHE A . n A 1 65 ALA 65 147 147 ALA ALA A . n A 1 66 VAL 66 148 148 VAL VAL A . n A 1 67 ARG 67 149 149 ARG ARG A . n A 1 68 GLU 68 150 150 GLU GLU A . n A 1 69 HIS 69 151 151 HIS HIS A . n A 1 70 GLY 70 152 152 GLY GLY A . n A 1 71 ASP 71 153 153 ASP ASP A . n A 1 72 PHE 72 154 154 PHE PHE A . n A 1 73 TYR 73 155 155 TYR TYR A . n A 1 74 PRO 74 156 156 PRO PRO A . n A 1 75 PHE 75 157 157 PHE PHE A . n A 1 76 ASP 76 158 158 ASP ASP A . n A 1 77 GLY 77 159 159 GLY GLY A . n A 1 78 PRO 78 160 160 PRO PRO A . n A 1 79 GLY 79 161 161 GLY GLY A . n A 1 80 ASN 80 162 162 ASN ASN A . n A 1 81 VAL 81 163 163 VAL VAL A . n A 1 82 LEU 82 164 164 LEU LEU A . n A 1 83 ALA 83 165 165 ALA ALA A . n A 1 84 HIS 84 166 166 HIS HIS A . n A 1 85 ALA 85 167 167 ALA ALA A . n A 1 86 TYR 86 168 168 TYR TYR A . n A 1 87 ALA 87 169 169 ALA ALA A . n A 1 88 PRO 88 170 170 PRO PRO A . n A 1 89 GLY 89 171 171 GLY GLY A . n A 1 90 PRO 90 172 172 PRO PRO A . n A 1 91 GLY 91 173 173 GLY GLY A . n A 1 92 ILE 92 174 174 ILE ILE A . n A 1 93 ASN 93 175 175 ASN ASN A . n A 1 94 GLY 94 176 176 GLY GLY A . n A 1 95 ASP 95 177 177 ASP ASP A . n A 1 96 ALA 96 178 178 ALA ALA A . n A 1 97 HIS 97 179 179 HIS HIS A . n A 1 98 PHE 98 180 180 PHE PHE A . n A 1 99 ASP 99 181 181 ASP ASP A . n A 1 100 ASP 100 182 182 ASP ASP A . n A 1 101 ASP 101 183 183 ASP ASP A . n A 1 102 GLU 102 184 184 GLU GLU A . n A 1 103 GLN 103 185 185 GLN GLN A . n A 1 104 TRP 104 186 186 TRP TRP A . n A 1 105 THR 105 187 187 THR THR A . n A 1 106 LYS 106 188 188 LYS LYS A . n A 1 107 ASP 107 189 189 ASP ASP A . n A 1 108 THR 108 190 190 THR THR A . n A 1 109 THR 109 191 191 THR THR A . n A 1 110 GLY 110 192 192 GLY GLY A . n A 1 111 THR 111 193 193 THR THR A . n A 1 112 ASN 112 194 194 ASN ASN A . n A 1 113 LEU 113 195 195 LEU LEU A . n A 1 114 PHE 114 196 196 PHE PHE A . n A 1 115 LEU 115 197 197 LEU LEU A . n A 1 116 VAL 116 198 198 VAL VAL A . n A 1 117 ALA 117 199 199 ALA ALA A . n A 1 118 ALA 118 200 200 ALA ALA A . n A 1 119 HIS 119 201 201 HIS HIS A . n A 1 120 GLU 120 202 202 GLU GLU A . n A 1 121 ILE 121 203 203 ILE ILE A . n A 1 122 GLY 122 204 204 GLY GLY A . n A 1 123 HIS 123 205 205 HIS HIS A . n A 1 124 SER 124 206 206 SER SER A . n A 1 125 LEU 125 207 207 LEU LEU A . n A 1 126 GLY 126 208 208 GLY GLY A . n A 1 127 LEU 127 209 209 LEU LEU A . n A 1 128 PHE 128 210 210 PHE PHE A . n A 1 129 HIS 129 211 211 HIS HIS A . n A 1 130 SER 130 212 212 SER SER A . n A 1 131 ALA 131 213 213 ALA ALA A . n A 1 132 ASN 132 214 214 ASN ASN A . n A 1 133 THR 133 215 215 THR THR A . n A 1 134 GLU 134 216 216 GLU GLU A . n A 1 135 ALA 135 217 217 ALA ALA A . n A 1 136 LEU 136 218 218 LEU LEU A . n A 1 137 MET 137 219 219 MET MET A . n A 1 138 TYR 138 220 220 TYR TYR A . n A 1 139 PRO 139 221 221 PRO PRO A . n A 1 140 LEU 140 222 222 LEU LEU A . n A 1 141 TYR 141 223 223 TYR TYR A . n A 1 142 HIS 142 224 224 HIS HIS A . n A 1 143 SER 143 225 225 SER SER A . n A 1 144 LEU 144 226 226 LEU LEU A . n A 1 145 THR 145 227 227 THR THR A . n A 1 146 ASP 146 228 228 ASP ASP A . n A 1 147 LEU 147 229 229 LEU LEU A . n A 1 148 THR 148 230 230 THR THR A . n A 1 149 ARG 149 231 231 ARG ARG A . n A 1 150 PHE 150 232 232 PHE PHE A . n A 1 151 ARG 151 233 233 ARG ARG A . n A 1 152 LEU 152 234 234 LEU LEU A . n A 1 153 SER 153 235 235 SER SER A . n A 1 154 GLN 154 236 236 GLN GLN A . n A 1 155 ASP 155 237 237 ASP ASP A . n A 1 156 ASP 156 238 238 ASP ASP A . n A 1 157 ILE 157 239 239 ILE ILE A . n A 1 158 ASN 158 240 240 ASN ASN A . n A 1 159 GLY 159 241 241 GLY GLY A . n A 1 160 ILE 160 242 242 ILE ILE A . n A 1 161 GLN 161 243 243 GLN GLN A . n A 1 162 SER 162 244 244 SER SER A . n A 1 163 LEU 163 245 245 LEU LEU A . n A 1 164 TYR 164 246 246 TYR TYR A . n A 1 165 GLY 165 247 247 GLY GLY A . n A 1 166 PRO 166 248 248 PRO PRO A . n A 1 167 PRO 167 249 249 PRO PRO A . n A 1 168 PRO 168 250 250 PRO PRO A . n B 2 1 CYS 1 301 301 CYS CYS B . n B 2 2 THR 2 302 302 THR THR B . n B 2 3 CYS 3 303 303 CYS CYS B . n B 2 4 VAL 4 304 304 VAL VAL B . n B 2 5 PRO 5 305 305 PRO PRO B . n B 2 6 PRO 6 306 306 PRO PRO B . n B 2 7 HIS 7 307 307 HIS HIS B . n B 2 8 PRO 8 308 308 PRO PRO B . n B 2 9 GLN 9 309 309 GLN GLN B . n B 2 10 THR 10 310 310 THR THR B . n B 2 11 ALA 11 311 311 ALA ALA B . n B 2 12 PHE 12 312 312 PHE PHE B . n B 2 13 CYS 13 313 313 CYS CYS B . n B 2 14 ASN 14 314 314 ASN ASN B . n B 2 15 SER 15 315 315 SER SER B . n B 2 16 ASP 16 316 316 ASP ASP B . n B 2 17 LEU 17 317 317 LEU LEU B . n B 2 18 VAL 18 318 318 VAL VAL B . n B 2 19 ILE 19 319 319 ILE ILE B . n B 2 20 ARG 20 320 320 ARG ARG B . n B 2 21 ALA 21 321 321 ALA ALA B . n B 2 22 LYS 22 322 322 LYS LYS B . n B 2 23 PHE 23 323 323 PHE PHE B . n B 2 24 VAL 24 324 324 VAL VAL B . n B 2 25 GLY 25 325 325 GLY GLY B . n B 2 26 THR 26 326 326 THR THR B . n B 2 27 PRO 27 327 327 PRO PRO B . n B 2 28 GLU 28 328 328 GLU GLU B . n B 2 29 VAL 29 329 329 VAL VAL B . n B 2 30 ASN 30 330 330 ASN ASN B . n B 2 31 GLN 31 331 331 GLN GLN B . n B 2 32 THR 32 332 332 THR THR B . n B 2 33 THR 33 333 333 THR THR B . n B 2 34 LEU 34 334 334 LEU LEU B . n B 2 35 TYR 35 335 335 TYR TYR B . n B 2 36 GLN 36 336 336 GLN GLN B . n B 2 37 ARG 37 337 337 ARG ARG B . n B 2 38 TYR 38 338 338 TYR TYR B . n B 2 39 GLU 39 339 339 GLU GLU B . n B 2 40 ILE 40 340 340 ILE ILE B . n B 2 41 LYS 41 341 341 LYS LYS B . n B 2 42 MET 42 342 342 MET MET B . n B 2 43 THR 43 343 343 THR THR B . n B 2 44 LYS 44 344 344 LYS LYS B . n B 2 45 MET 45 345 345 MET MET B . n B 2 46 TYR 46 346 346 TYR TYR B . n B 2 47 LYS 47 347 347 LYS LYS B . n B 2 48 GLY 48 348 348 GLY GLY B . n B 2 49 PHE 49 349 349 PHE PHE B . n B 2 50 GLN 50 350 350 GLN GLN B . n B 2 51 ALA 51 351 351 ALA ALA B . n B 2 52 LEU 52 352 352 LEU LEU B . n B 2 53 GLY 53 353 353 GLY GLY B . n B 2 54 ASP 54 354 354 ASP ASP B . n B 2 55 ALA 55 355 355 ALA ALA B . n B 2 56 ALA 56 356 356 ALA ALA B . n B 2 57 ASP 57 357 357 ASP ASP B . n B 2 58 ILE 58 358 358 ILE ILE B . n B 2 59 ARG 59 359 359 ARG ARG B . n B 2 60 PHE 60 360 360 PHE PHE B . n B 2 61 VAL 61 361 361 VAL VAL B . n B 2 62 TYR 62 362 362 TYR TYR B . n B 2 63 THR 63 363 363 THR THR B . n B 2 64 PRO 64 364 364 PRO PRO B . n B 2 65 ALA 65 365 365 ALA ALA B . n B 2 66 MET 66 366 366 MET MET B . n B 2 67 GLU 67 367 367 GLU GLU B . n B 2 68 SER 68 368 368 SER SER B . n B 2 69 VAL 69 369 369 VAL VAL B . n B 2 70 CYS 70 370 370 CYS CYS B . n B 2 71 GLY 71 371 371 GLY GLY B . n B 2 72 TYR 72 372 372 TYR TYR B . n B 2 73 PHE 73 373 373 PHE PHE B . n B 2 74 HIS 74 374 374 HIS HIS B . n B 2 75 ARG 75 375 375 ARG ARG B . n B 2 76 SER 76 376 376 SER SER B . n B 2 77 HIS 77 377 377 HIS HIS B . n B 2 78 ASN 78 378 378 ASN ASN B . n B 2 79 ARG 79 379 379 ARG ARG B . n B 2 80 SER 80 380 380 SER SER B . n B 2 81 GLU 81 381 381 GLU GLU B . n B 2 82 GLU 82 382 382 GLU GLU B . n B 2 83 PHE 83 383 383 PHE PHE B . n B 2 84 LEU 84 384 384 LEU LEU B . n B 2 85 ILE 85 385 385 ILE ILE B . n B 2 86 ALA 86 386 386 ALA ALA B . n B 2 87 GLY 87 387 387 GLY GLY B . n B 2 88 LYS 88 388 388 LYS LYS B . n B 2 89 LEU 89 389 389 LEU LEU B . n B 2 90 GLN 90 390 390 GLN GLN B . n B 2 91 ASP 91 391 391 ASP ASP B . n B 2 92 GLY 92 392 392 GLY GLY B . n B 2 93 LEU 93 393 393 LEU LEU B . n B 2 94 LEU 94 394 394 LEU LEU B . n B 2 95 HIS 95 395 395 HIS HIS B . n B 2 96 ILE 96 396 396 ILE ILE B . n B 2 97 THR 97 397 397 THR THR B . n B 2 98 THR 98 398 398 THR THR B . n B 2 99 CYS 99 399 399 CYS CYS B . n B 2 100 SER 100 400 400 SER SER B . n B 2 101 PHE 101 401 401 PHE PHE B . n B 2 102 VAL 102 402 402 VAL VAL B . n B 2 103 ALA 103 403 403 ALA ALA B . n B 2 104 PRO 104 404 404 PRO PRO B . n B 2 105 TRP 105 405 405 TRP TRP B . n B 2 106 ASN 106 406 406 ASN ASN B . n B 2 107 SER 107 407 407 SER SER B . n B 2 108 LEU 108 408 408 LEU LEU B . n B 2 109 SER 109 409 409 SER SER B . n B 2 110 LEU 110 410 410 LEU LEU B . n B 2 111 ALA 111 411 411 ALA ALA B . n B 2 112 GLN 112 412 412 GLN GLN B . n B 2 113 ARG 113 413 413 ARG ARG B . n B 2 114 ARG 114 414 414 ARG ARG B . n B 2 115 GLY 115 415 415 GLY GLY B . n B 2 116 PHE 116 416 416 PHE PHE B . n B 2 117 THR 117 417 417 THR THR B . n B 2 118 LYS 118 418 418 LYS LYS B . n B 2 119 THR 119 419 419 THR THR B . n B 2 120 TYR 120 420 420 TYR TYR B . n B 2 121 THR 121 421 421 THR THR B . n B 2 122 VAL 122 422 422 VAL VAL B . n B 2 123 GLY 123 423 423 GLY GLY B . n B 2 124 CYS 124 424 424 CYS CYS B . n B 2 125 GLU 125 425 425 GLU GLU B . n B 2 126 GLU 126 426 426 GLU GLU B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-07-29 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-02-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_struct_conn.pdbx_dist_value' 5 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 6 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 7 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 8 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A PRO 221 ? ? H B CYS 303 ? ? 1.58 2 1 O A ILE 203 ? ? HG A SER 206 ? ? 1.59 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CE1 A HIS 96 ? ? NE2 A HIS 96 ? ? 1.243 1.317 -0.074 0.011 N 2 1 CG A TRP 124 ? ? CD2 A TRP 124 ? ? 1.536 1.432 0.104 0.017 N 3 1 CE1 A HIS 151 ? ? NE2 A HIS 151 ? ? 1.245 1.317 -0.072 0.011 N 4 1 CE1 A HIS 166 ? ? NE2 A HIS 166 ? ? 1.247 1.317 -0.070 0.011 N 5 1 CE1 A HIS 179 ? ? NE2 A HIS 179 ? ? 1.241 1.317 -0.076 0.011 N 6 1 CE1 A HIS 201 ? ? NE2 A HIS 201 ? ? 1.246 1.317 -0.071 0.011 N 7 1 CE1 A HIS 205 ? ? NE2 A HIS 205 ? ? 1.243 1.317 -0.074 0.011 N 8 1 CE1 A HIS 211 ? ? NE2 A HIS 211 ? ? 1.245 1.317 -0.072 0.011 N 9 1 CE1 A HIS 224 ? ? NE2 A HIS 224 ? ? 1.248 1.317 -0.069 0.011 N 10 1 CE1 B HIS 307 ? ? NE2 B HIS 307 ? ? 1.249 1.317 -0.068 0.011 N 11 1 CE1 B HIS 374 ? ? NE2 B HIS 374 ? ? 1.242 1.317 -0.075 0.011 N 12 1 CE1 B HIS 377 ? ? NE2 B HIS 377 ? ? 1.240 1.317 -0.077 0.011 N 13 1 CE1 B HIS 395 ? ? NE2 B HIS 395 ? ? 1.241 1.317 -0.076 0.011 N 14 1 CG B TRP 405 ? ? CD2 B TRP 405 ? ? 1.539 1.432 0.107 0.017 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 84 ? ? CZ A ARG 84 ? ? NH1 A ARG 84 ? ? 123.46 120.30 3.16 0.50 N 2 1 NE A ARG 93 ? ? CZ A ARG 93 ? ? NH1 A ARG 93 ? ? 123.90 120.30 3.60 0.50 N 3 1 NE A ARG 100 ? ? CZ A ARG 100 ? ? NH1 A ARG 100 ? ? 124.09 120.30 3.79 0.50 N 4 1 NE B ARG 359 ? ? CZ B ARG 359 ? ? NH1 B ARG 359 ? ? 123.39 120.30 3.09 0.50 N 5 1 NE B ARG 413 ? ? CZ B ARG 413 ? ? NH1 B ARG 413 ? ? 126.65 120.30 6.35 0.50 N 6 1 NE B ARG 413 ? ? CZ B ARG 413 ? ? NH2 B ARG 413 ? ? 116.66 120.30 -3.64 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 93 ? ? -83.75 36.52 2 1 ARG A 149 ? ? 47.05 -128.57 3 1 HIS A 151 ? ? -147.85 33.34 4 1 ASP A 158 ? ? -84.05 30.89 5 1 ASN A 162 ? ? 50.39 -104.54 6 1 PRO A 170 ? ? -49.27 151.40 7 1 THR A 191 ? ? -151.06 59.27 8 1 ASN A 194 ? ? -58.67 105.53 9 1 MET A 219 ? ? -66.51 4.49 10 1 TYR A 223 ? ? -57.12 105.66 11 1 SER A 225 ? ? 15.40 105.45 12 1 THR A 227 ? ? -54.55 -85.91 13 1 LEU A 245 ? ? -108.91 -62.02 14 1 ASN B 330 ? ? -74.00 -111.56 15 1 THR B 343 ? ? -95.06 -77.82 16 1 GLN B 350 ? ? -89.65 37.51 17 1 ALA B 351 ? ? -163.37 8.89 18 1 LEU B 352 ? ? 51.84 -106.22 19 1 ASP B 354 ? ? 25.66 -66.65 20 1 ALA B 355 ? ? -157.51 -6.14 21 1 ALA B 356 ? ? -168.05 45.80 22 1 CYS B 370 ? ? 91.94 6.81 23 1 ASP B 391 ? ? 65.01 -126.42 24 1 LYS B 418 ? ? -135.94 -46.09 #