HEADER CELL ADHESION 11-MAR-03 1OQV TITLE STRUCTURE OF TCPA, THE TYPE IV PILIN SUBUNIT FROM THE TOXIN CO- TITLE 2 REGULATED PILUS OF VIBRIO CHOLERAE CLASSICAL BIOTYPE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TOXIN-COREGULATED PILUS SUBUNIT; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: GLOBULAR HEAD DOMAIN, RESIDUES 29-199; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE; SOURCE 3 ORGANISM_TAXID: 666; SOURCE 4 GENE: TCPA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ORIGAMI; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-15B KEYWDS TCPA, TYPE IV PILIN, PILIN, PILUS FILAMENT, VIBRIO CHOLERAE, FIBER KEYWDS 2 FORMING PROTEIN, ADHESIN, FIMBRIAE, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR L.CRAIG,J.A.TAINER REVDAT 5 16-OCT-24 1OQV 1 REMARK REVDAT 4 03-APR-24 1OQV 1 REMARK SEQADV REVDAT 3 13-JUL-11 1OQV 1 VERSN REVDAT 2 24-FEB-09 1OQV 1 VERSN REVDAT 1 03-JUN-03 1OQV 0 JRNL AUTH L.CRAIG,R.K.TAYLOR,M.E.PIQUE,B.D.ADAIR,A.S.ARVAI,M.SINGH, JRNL AUTH 2 S.J.LLOYD,D.S.SHIN,E.D.GETZOFF,M.YEAGER,K.T.FOREST, JRNL AUTH 3 J.A.TAINER JRNL TITL TYPE IV PILIN STRUCTURE AND ASSEMBLY: X-RAY AND EM ANALYSES JRNL TITL 2 OF VIBRIO CHOLERAE TOXIN-COREGULATED PILUS AND PSEUDOMONAS JRNL TITL 3 AERUGINOSA PAK PILIN JRNL REF MOL.CELL V. 11 1139 2003 JRNL REFN ISSN 1097-2765 JRNL PMID 12769840 JRNL DOI 10.1016/S1097-2765(03)00170-9 REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELXL-97 REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 5.0 REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : 0.117 REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.113 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.174 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 6110 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 115573 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : NULL REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : NULL REMARK 3 FREE R VALUE (F>4SIG(F)) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3681 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 18 REMARK 3 SOLVENT ATOMS : 765 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : NULL REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : NULL REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : NULL REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : NULL REMARK 3 NUMBER OF RESTRAINTS : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 ANGLE DISTANCES (A) : 2.100 REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : NULL REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : NULL REMARK 3 ZERO CHIRAL VOLUMES (A**3) : NULL REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : NULL REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : NULL REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : NULL REMARK 3 SIMILAR ADP COMPONENTS (A**2) : NULL REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: NULL REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : ENGH & HUBER REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1OQV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-MAR-03. REMARK 100 THE DEPOSITION ID IS D_1000018579. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-NOV-01 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.975913 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHOROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 115573 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 4.710 REMARK 200 R MERGE (I) : 0.07300 REMARK 200 R SYM (I) : 0.07300 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 5.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.37 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.24500 REMARK 200 R SYM FOR SHELL (I) : 0.24500 REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 1.8 A STRUCTURE OF N-TERMINALLY TRUNCATED, SEMET REMARK 200 -LABELLED TCPA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, IMIDAZOLE, SODIUM CHLORIDE, REMARK 280 GLYCEROL, PH 8.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 17.85950 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 17.85950 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 17.85950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THOUSANDS OF PILIN SUBUNITS ASSEMBLE TO FORM A LONG THIN REMARK 300 FILAMENT 6 NM IN DIAMETER AND SEVERAL MICRONS IN LENGTH (SEE TCP REMARK 300 MODEL, PDB FILE XXX) REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 8 REMARK 465 GLY A 9 REMARK 465 SER A 10 REMARK 465 SER A 11 REMARK 465 HIS A 12 REMARK 465 HIS A 13 REMARK 465 HIS A 14 REMARK 465 HIS A 15 REMARK 465 HIS A 16 REMARK 465 HIS A 17 REMARK 465 SER A 18 REMARK 465 SER A 19 REMARK 465 GLY A 20 REMARK 465 LEU A 21 REMARK 465 VAL A 22 REMARK 465 PRO A 23 REMARK 465 ARG A 24 REMARK 465 GLY A 25 REMARK 465 SER A 26 REMARK 465 HIS A 27 REMARK 465 MET A 28 REMARK 465 MET B 208 REMARK 465 GLY B 209 REMARK 465 SER B 210 REMARK 465 SER B 211 REMARK 465 HIS B 212 REMARK 465 HIS B 213 REMARK 465 HIS B 214 REMARK 465 HIS B 215 REMARK 465 HIS B 216 REMARK 465 HIS B 217 REMARK 465 SER B 218 REMARK 465 SER B 219 REMARK 465 GLY B 220 REMARK 465 LEU B 221 REMARK 465 VAL B 222 REMARK 465 PRO B 223 REMARK 465 ARG B 224 REMARK 465 GLY B 225 REMARK 465 SER B 226 REMARK 465 HIS B 227 REMARK 465 MET B 228 REMARK 465 MET C 408 REMARK 465 GLY C 409 REMARK 465 SER C 410 REMARK 465 SER C 411 REMARK 465 HIS C 412 REMARK 465 HIS C 413 REMARK 465 HIS C 414 REMARK 465 HIS C 415 REMARK 465 HIS C 416 REMARK 465 HIS C 417 REMARK 465 SER C 418 REMARK 465 SER C 419 REMARK 465 GLY C 420 REMARK 465 LEU C 421 REMARK 465 VAL C 422 REMARK 465 PRO C 423 REMARK 465 ARG C 424 REMARK 465 GLY C 425 REMARK 465 SER C 426 REMARK 465 HIS C 427 REMARK 465 MET C 428 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 1213 O HOH B 1235 4565 1.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 30 CB SER A 30 OG 0.102 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 29 N - CA - CB ANGL. DEV. = -12.2 DEGREES REMARK 500 ASP A 29 O - C - N ANGL. DEV. = -12.7 DEGREES REMARK 500 ASN A 41 CA - CB - CG ANGL. DEV. = -14.5 DEGREES REMARK 500 PHE A 96 O - C - N ANGL. DEV. = -11.1 DEGREES REMARK 500 SER A 97 C - N - CA ANGL. DEV. = 18.4 DEGREES REMARK 500 ASP A 175 C - N - CA ANGL. DEV. = 15.8 DEGREES REMARK 500 PHE B 296 O - C - N ANGL. DEV. = -9.7 DEGREES REMARK 500 SER B 297 C - N - CA ANGL. DEV. = 18.5 DEGREES REMARK 500 ALA B 355 C - N - CA ANGL. DEV. = 15.4 DEGREES REMARK 500 HIS B 381 CG - ND1 - CE1 ANGL. DEV. = 8.6 DEGREES REMARK 500 CYS C 520 CA - CB - SG ANGL. DEV. = 7.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 102 -9.98 81.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 602 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1OQW RELATED DB: PDB REMARK 900 FULL LENGTH PAK PILIN FROM PSEUDOMONAS AERUGINOSA REMARK 900 RELATED ID: 1OR9 RELATED DB: PDB REMARK 900 MODEL FOR THE ASSEMBLY OF THE TYPE IV PILUS FROM VIBRIO CHOLERAE REMARK 900 BASED ON ELECTRON MICROSCOPY AND X-RAY CRYSTALLOGRAPHY REMARK 900 RELATED ID: 1DZO RELATED DB: PDB REMARK 900 TRUNCATED PAK PILIN FROM PSEUDOMONAS AERUGINOSA REMARK 900 RELATED ID: 2PIL RELATED DB: PDB REMARK 900 CRYSTALLOGRAPHIC STRUCTURE OF PHOSPHORYLATED PILIN FROM NEISSERIA DBREF 1OQV A 29 199 UNP P23024 TCPA2_VIBCH 29 199 DBREF 1OQV B 229 399 UNP P23024 TCPA2_VIBCH 29 199 DBREF 1OQV C 429 599 UNP P23024 TCPA2_VIBCH 29 199 SEQADV 1OQV MET A 8 UNP P23024 EXPRESSION TAG SEQADV 1OQV GLY A 9 UNP P23024 EXPRESSION TAG SEQADV 1OQV SER A 10 UNP P23024 EXPRESSION TAG SEQADV 1OQV SER A 11 UNP P23024 EXPRESSION TAG SEQADV 1OQV HIS A 12 UNP P23024 EXPRESSION TAG SEQADV 1OQV HIS A 13 UNP P23024 EXPRESSION TAG SEQADV 1OQV HIS A 14 UNP P23024 EXPRESSION TAG SEQADV 1OQV HIS A 15 UNP P23024 EXPRESSION TAG SEQADV 1OQV HIS A 16 UNP P23024 EXPRESSION TAG SEQADV 1OQV HIS A 17 UNP P23024 EXPRESSION TAG SEQADV 1OQV SER A 18 UNP P23024 EXPRESSION TAG SEQADV 1OQV SER A 19 UNP P23024 EXPRESSION TAG SEQADV 1OQV GLY A 20 UNP P23024 EXPRESSION TAG SEQADV 1OQV LEU A 21 UNP P23024 EXPRESSION TAG SEQADV 1OQV VAL A 22 UNP P23024 EXPRESSION TAG SEQADV 1OQV PRO A 23 UNP P23024 EXPRESSION TAG SEQADV 1OQV ARG A 24 UNP P23024 EXPRESSION TAG SEQADV 1OQV GLY A 25 UNP P23024 EXPRESSION TAG SEQADV 1OQV SER A 26 UNP P23024 EXPRESSION TAG SEQADV 1OQV HIS A 27 UNP P23024 EXPRESSION TAG SEQADV 1OQV MET A 28 UNP P23024 EXPRESSION TAG SEQADV 1OQV MET B 208 UNP P23024 EXPRESSION TAG SEQADV 1OQV GLY B 209 UNP P23024 EXPRESSION TAG SEQADV 1OQV SER B 210 UNP P23024 EXPRESSION TAG SEQADV 1OQV SER B 211 UNP P23024 EXPRESSION TAG SEQADV 1OQV HIS B 212 UNP P23024 EXPRESSION TAG SEQADV 1OQV HIS B 213 UNP P23024 EXPRESSION TAG SEQADV 1OQV HIS B 214 UNP P23024 EXPRESSION TAG SEQADV 1OQV HIS B 215 UNP P23024 EXPRESSION TAG SEQADV 1OQV HIS B 216 UNP P23024 EXPRESSION TAG SEQADV 1OQV HIS B 217 UNP P23024 EXPRESSION TAG SEQADV 1OQV SER B 218 UNP P23024 EXPRESSION TAG SEQADV 1OQV SER B 219 UNP P23024 EXPRESSION TAG SEQADV 1OQV GLY B 220 UNP P23024 EXPRESSION TAG SEQADV 1OQV LEU B 221 UNP P23024 EXPRESSION TAG SEQADV 1OQV VAL B 222 UNP P23024 EXPRESSION TAG SEQADV 1OQV PRO B 223 UNP P23024 EXPRESSION TAG SEQADV 1OQV ARG B 224 UNP P23024 EXPRESSION TAG SEQADV 1OQV GLY B 225 UNP P23024 EXPRESSION TAG SEQADV 1OQV SER B 226 UNP P23024 EXPRESSION TAG SEQADV 1OQV HIS B 227 UNP P23024 EXPRESSION TAG SEQADV 1OQV MET B 228 UNP P23024 EXPRESSION TAG SEQADV 1OQV MET C 408 UNP P23024 EXPRESSION TAG SEQADV 1OQV GLY C 409 UNP P23024 EXPRESSION TAG SEQADV 1OQV SER C 410 UNP P23024 EXPRESSION TAG SEQADV 1OQV SER C 411 UNP P23024 EXPRESSION TAG SEQADV 1OQV HIS C 412 UNP P23024 EXPRESSION TAG SEQADV 1OQV HIS C 413 UNP P23024 EXPRESSION TAG SEQADV 1OQV HIS C 414 UNP P23024 EXPRESSION TAG SEQADV 1OQV HIS C 415 UNP P23024 EXPRESSION TAG SEQADV 1OQV HIS C 416 UNP P23024 EXPRESSION TAG SEQADV 1OQV HIS C 417 UNP P23024 EXPRESSION TAG SEQADV 1OQV SER C 418 UNP P23024 EXPRESSION TAG SEQADV 1OQV SER C 419 UNP P23024 EXPRESSION TAG SEQADV 1OQV GLY C 420 UNP P23024 EXPRESSION TAG SEQADV 1OQV LEU C 421 UNP P23024 EXPRESSION TAG SEQADV 1OQV VAL C 422 UNP P23024 EXPRESSION TAG SEQADV 1OQV PRO C 423 UNP P23024 EXPRESSION TAG SEQADV 1OQV ARG C 424 UNP P23024 EXPRESSION TAG SEQADV 1OQV GLY C 425 UNP P23024 EXPRESSION TAG SEQADV 1OQV SER C 426 UNP P23024 EXPRESSION TAG SEQADV 1OQV HIS C 427 UNP P23024 EXPRESSION TAG SEQADV 1OQV MET C 428 UNP P23024 EXPRESSION TAG SEQRES 1 A 192 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 192 LEU VAL PRO ARG GLY SER HIS MET ASP SER GLN ASN MET SEQRES 3 A 192 THR LYS ALA ALA GLN SER LEU ASN SER ILE GLN VAL ALA SEQRES 4 A 192 LEU THR GLN THR TYR ARG GLY LEU GLY ASN TYR PRO ALA SEQRES 5 A 192 THR ALA ASP ALA THR ALA ALA SER LYS LEU THR SER GLY SEQRES 6 A 192 LEU VAL SER LEU GLY LYS ILE SER SER ASP GLU ALA LYS SEQRES 7 A 192 ASN PRO PHE ILE GLY THR ASN MET ASN ILE PHE SER PHE SEQRES 8 A 192 PRO ARG ASN ALA ALA ALA ASN LYS ALA PHE ALA ILE SER SEQRES 9 A 192 VAL ASP GLY LEU THR GLN ALA GLN CYS LYS THR LEU ILE SEQRES 10 A 192 THR SER VAL GLY ASP MET PHE PRO TYR ILE ALA ILE LYS SEQRES 11 A 192 ALA GLY GLY ALA VAL ALA LEU ALA ASP LEU GLY ASP PHE SEQRES 12 A 192 GLU ASN SER ALA ALA ALA ALA GLU THR GLY VAL GLY VAL SEQRES 13 A 192 ILE LYS SER ILE ALA PRO ALA SER LYS ASN LEU ASP LEU SEQRES 14 A 192 THR ASN ILE THR HIS VAL GLU LYS LEU CYS LYS GLY THR SEQRES 15 A 192 ALA PRO PHE GLY VAL ALA PHE GLY ASN SER SEQRES 1 B 192 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 192 LEU VAL PRO ARG GLY SER HIS MET ASP SER GLN ASN MET SEQRES 3 B 192 THR LYS ALA ALA GLN SER LEU ASN SER ILE GLN VAL ALA SEQRES 4 B 192 LEU THR GLN THR TYR ARG GLY LEU GLY ASN TYR PRO ALA SEQRES 5 B 192 THR ALA ASP ALA THR ALA ALA SER LYS LEU THR SER GLY SEQRES 6 B 192 LEU VAL SER LEU GLY LYS ILE SER SER ASP GLU ALA LYS SEQRES 7 B 192 ASN PRO PHE ILE GLY THR ASN MET ASN ILE PHE SER PHE SEQRES 8 B 192 PRO ARG ASN ALA ALA ALA ASN LYS ALA PHE ALA ILE SER SEQRES 9 B 192 VAL ASP GLY LEU THR GLN ALA GLN CYS LYS THR LEU ILE SEQRES 10 B 192 THR SER VAL GLY ASP MET PHE PRO TYR ILE ALA ILE LYS SEQRES 11 B 192 ALA GLY GLY ALA VAL ALA LEU ALA ASP LEU GLY ASP PHE SEQRES 12 B 192 GLU ASN SER ALA ALA ALA ALA GLU THR GLY VAL GLY VAL SEQRES 13 B 192 ILE LYS SER ILE ALA PRO ALA SER LYS ASN LEU ASP LEU SEQRES 14 B 192 THR ASN ILE THR HIS VAL GLU LYS LEU CYS LYS GLY THR SEQRES 15 B 192 ALA PRO PHE GLY VAL ALA PHE GLY ASN SER SEQRES 1 C 192 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 C 192 LEU VAL PRO ARG GLY SER HIS MET ASP SER GLN ASN MET SEQRES 3 C 192 THR LYS ALA ALA GLN SER LEU ASN SER ILE GLN VAL ALA SEQRES 4 C 192 LEU THR GLN THR TYR ARG GLY LEU GLY ASN TYR PRO ALA SEQRES 5 C 192 THR ALA ASP ALA THR ALA ALA SER LYS LEU THR SER GLY SEQRES 6 C 192 LEU VAL SER LEU GLY LYS ILE SER SER ASP GLU ALA LYS SEQRES 7 C 192 ASN PRO PHE ILE GLY THR ASN MET ASN ILE PHE SER PHE SEQRES 8 C 192 PRO ARG ASN ALA ALA ALA ASN LYS ALA PHE ALA ILE SER SEQRES 9 C 192 VAL ASP GLY LEU THR GLN ALA GLN CYS LYS THR LEU ILE SEQRES 10 C 192 THR SER VAL GLY ASP MET PHE PRO TYR ILE ALA ILE LYS SEQRES 11 C 192 ALA GLY GLY ALA VAL ALA LEU ALA ASP LEU GLY ASP PHE SEQRES 12 C 192 GLU ASN SER ALA ALA ALA ALA GLU THR GLY VAL GLY VAL SEQRES 13 C 192 ILE LYS SER ILE ALA PRO ALA SER LYS ASN LEU ASP LEU SEQRES 14 C 192 THR ASN ILE THR HIS VAL GLU LYS LEU CYS LYS GLY THR SEQRES 15 C 192 ALA PRO PHE GLY VAL ALA PHE GLY ASN SER HET GOL A 600 6 HET GOL B 601 6 HET GOL B 602 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 4 GOL 3(C3 H8 O3) FORMUL 7 HOH *765(H2 O) HELIX 1 1 SER A 30 ARG A 52 1 23 HELIX 2 2 GLY A 53 GLY A 55 5 3 HELIX 3 3 ASP A 62 LEU A 76 1 15 HELIX 4 4 SER A 80 LYS A 85 1 6 HELIX 5 5 THR A 116 GLY A 128 1 13 HELIX 6 6 ASP A 129 PHE A 131 5 3 HELIX 7 7 ALA A 143 GLY A 148 1 6 HELIX 8 8 ALA A 156 GLY A 160 5 5 HELIX 9 9 ASN A 178 LEU A 185 1 8 HELIX 10 10 SER B 230 ARG B 252 1 23 HELIX 11 11 GLY B 253 GLY B 255 5 3 HELIX 12 12 ASP B 262 LEU B 276 1 15 HELIX 13 13 SER B 280 LYS B 285 1 6 HELIX 14 14 THR B 316 GLY B 328 1 13 HELIX 15 15 ASP B 329 PHE B 331 5 3 HELIX 16 16 ALA B 343 GLY B 348 1 6 HELIX 17 17 ALA B 356 GLY B 360 5 5 HELIX 18 18 ASN B 378 LEU B 385 1 8 HELIX 19 19 SER C 430 ARG C 452 1 23 HELIX 20 20 GLY C 453 GLY C 455 5 3 HELIX 21 21 ASP C 462 LEU C 476 1 15 HELIX 22 22 SER C 480 LYS C 485 1 6 HELIX 23 23 THR C 516 GLY C 528 1 13 HELIX 24 24 ASP C 529 PHE C 531 5 3 HELIX 25 25 ALA C 543 GLY C 548 5 6 HELIX 26 26 ALA C 556 GLY C 560 5 5 HELIX 27 27 ASN C 578 LEU C 585 1 8 SHEET 1 A 5 ASN A 94 ARG A 100 0 SHEET 2 A 5 ALA A 103 LEU A 115 -1 O SER A 111 N ASN A 94 SHEET 3 A 5 PHE A 192 ASN A 198 -1 O VAL A 194 N VAL A 112 SHEET 4 A 5 TYR A 133 ALA A 138 -1 N ALA A 135 O ALA A 195 SHEET 5 A 5 GLY A 162 LYS A 165 -1 O ILE A 164 N ILE A 134 SHEET 1 B 5 ASN B 294 ARG B 300 0 SHEET 2 B 5 ALA B 303 LEU B 315 -1 O SER B 311 N ASN B 294 SHEET 3 B 5 PHE B 392 ASN B 398 -1 O VAL B 394 N VAL B 312 SHEET 4 B 5 TYR B 333 ALA B 338 -1 N LYS B 337 O GLY B 393 SHEET 5 B 5 GLY B 362 LYS B 365 -1 O ILE B 364 N ILE B 334 SHEET 1 C 5 ASN C 494 ARG C 500 0 SHEET 2 C 5 ALA C 503 LEU C 515 -1 O SER C 511 N ASN C 494 SHEET 3 C 5 PHE C 592 ASN C 598 -1 O VAL C 594 N VAL C 512 SHEET 4 C 5 TYR C 533 ALA C 538 -1 N LYS C 537 O GLY C 593 SHEET 5 C 5 GLY C 562 LYS C 565 -1 O ILE C 564 N ILE C 534 SSBOND 1 CYS A 120 CYS A 186 1555 1555 2.03 SSBOND 2 CYS B 320 CYS B 386 1555 1555 2.03 SSBOND 3 CYS C 520 CYS C 586 1555 1555 2.00 CISPEP 1 ASP A 29 SER A 30 0 -11.94 CISPEP 2 ALA A 190 PRO A 191 0 -3.41 CISPEP 3 ALA B 390 PRO B 391 0 -3.49 CISPEP 4 ALA C 590 PRO C 591 0 -3.29 SITE 1 AC1 8 ARG A 52 GLY A 55 PHE A 88 LYS A 106 SITE 2 AC1 8 GLN A 119 SER A 199 HOH A 711 HOH A 924 SITE 1 AC2 6 HOH A 913 SER B 353 ALA B 354 VAL B 363 SITE 2 AC2 6 HOH B 672 HOH B 726 SITE 1 AC3 7 ARG B 252 TYR B 257 ARG B 300 LYS B 306 SITE 2 AC3 7 GLN B 319 SER B 399 HOH B 679 CRYST1 157.317 157.317 35.719 90.00 90.00 120.00 P 63 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006357 0.003670 0.000000 0.00000 SCALE2 0.000000 0.007340 0.000000 0.00000 SCALE3 0.000000 0.000000 0.027996 0.00000