HEADER IMMUNE SYSTEM 11-MAR-03 1OQX TITLE G-2 GLYCOVARIANT OF HUMAN IGG FC BOUND TO MINIMIZED VERSION OF PROTEIN TITLE 2 A CALLED Z34C CAVEAT 1OQX FUC F 6 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: IMMUNOGLOBULIN GAMMA-1 HEAVY CHAIN CONSTANT REGION; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: FC FRAGMENT; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: PROTEIN A Z34C; COMPND 8 CHAIN: C, D; COMPND 9 FRAGMENT: MINIMIZED B-DOMAIN; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: CHINESE HAMSTER; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 11 ORGANISM_TAXID: 32630; SOURCE 12 OTHER_DETAILS: PHAGE OPTIMIZED SEQUENCE FROM THE B-DOMAIN OF PROTEIN SOURCE 13 A STAPHYLOCOCCUS AUREUS. PEPTIDE PREPARED USING FMOC CHEMISTRY AND SOURCE 14 WANG RESIN. KEYWDS ANTIBODY, GLYCOSYLATION, OLIGOSACCHARIDES, IGG, PEPTIDE COMPLEX, KEYWDS 2 Z34C, PROTEIN A, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR T.S.RAJU,M.G.MULKERRIN,M.PARKER,A.M.DE VOS,H.GAZZANO-SANTORO, AUTHOR 2 K.TOTPAL,M.H.ULTSCH REVDAT 6 16-AUG-23 1OQX 1 REMARK REVDAT 5 16-DEC-20 1OQX 1 SOURCE REMARK HETSYN ATOM REVDAT 4 29-JUL-20 1OQX 1 CAVEAT COMPND REMARK HETNAM REVDAT 4 2 1 LINK SITE ATOM REVDAT 3 13-JUL-11 1OQX 1 VERSN REVDAT 2 24-FEB-09 1OQX 1 VERSN REVDAT 1 25-MAR-03 1OQX 0 JRNL AUTH T.S.RAJU,M.G.MULKERRIN,M.PARKER,A.M.DE VOS, JRNL AUTH 2 H.GAZZANO-SANTORO,K.TOTPAL,M.H.ULTSCH JRNL TITL IMPACT OF FC GLYCANS ON THE EFFECTOR FUNCTIONS VARY WITH THE JRNL TITL 2 ANTIBODY MECHANISM OF ACTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 98.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.200 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 10000000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0100 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 18115 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : 0.306 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1776 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.007 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.76 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.90 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2630 REMARK 3 BIN R VALUE (WORKING SET) : 0.3820 REMARK 3 BIN FREE R VALUE : 0.4410 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 293 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.026 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3925 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 142 REMARK 3 SOLVENT ATOMS : 89 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 59.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 55.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.35 REMARK 3 ESD FROM SIGMAA (A) : 0.47 REMARK 3 LOW RESOLUTION CUTOFF (A) : 20.0 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.48 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.55 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 29.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.780 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 3.420 ; 4.000 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 5.260 ; 4.500 REMARK 3 SIDE-CHAIN BOND (A**2) : 4.810 ; 5.500 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 7.010 ; 6.500 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN REMARK 3 PARAMETER FILE 2 : PARAM3MOD.CHO REMARK 3 PARAMETER FILE 3 : PARAM19.SOL REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSD REMARK 3 TOPOLOGY FILE 2 : TOPH3MOD.CHO REMARK 3 TOPOLOGY FILE 3 : TOPH19.SOL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED REMARK 4 REMARK 4 1OQX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-MAR-03. REMARK 100 THE DEPOSITION ID IS D_1000018581. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-APR-98 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.08 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18601 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 99.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.59 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ID 1L6X REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 550 MME, 0.1M NAOAC, 0.25M NACL, REMARK 280 PH 5.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 43.71500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 62.84000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.71500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 62.84000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 446 REMARK 465 LYS A 447 REMARK 465 PRO B 445 REMARK 465 GLY B 446 REMARK 465 LYS B 447 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP B 401 OG SER B 403 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 238 150.13 -44.22 REMARK 500 ASP A 265 34.17 73.75 REMARK 500 THR A 299 -154.17 -110.10 REMARK 500 ASN A 390 48.14 -78.30 REMARK 500 HIS A 435 17.46 54.10 REMARK 500 SER A 444 -45.97 -144.85 REMARK 500 ASP B 270 71.69 -117.35 REMARK 500 ASN B 286 30.53 -95.64 REMARK 500 THR B 299 -160.36 -105.54 REMARK 500 ALA B 327 16.07 -62.67 REMARK 500 TYR B 373 134.87 -172.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 543 DISTANCE = 6.38 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1OQO RELATED DB: PDB REMARK 900 G0 GLYCOVARIANT BOUND TO Z34C REMARK 900 RELATED ID: 1L6X RELATED DB: PDB REMARK 900 G2 GLYCOVARIANT BOUND TO Z34C DBREF 1OQX A 236 447 GB 184747 AAC82527 118 329 DBREF 1OQX B 236 447 GB 184747 AAC82527 118 329 DBREF 1OQX C 6 39 PDB 1OQX 1OQX 6 39 DBREF 1OQX D 6 39 PDB 1OQX 1OQX 6 39 SEQRES 1 A 212 GLY GLY PRO SER VAL PHE LEU PHE PRO PRO LYS PRO LYS SEQRES 2 A 212 ASP THR LEU MET ILE SER ARG THR PRO GLU VAL THR CYS SEQRES 3 A 212 VAL VAL VAL ASP VAL SER HIS GLU ASP PRO GLU VAL LYS SEQRES 4 A 212 PHE ASN TRP TYR VAL ASP GLY VAL GLU VAL HIS ASN ALA SEQRES 5 A 212 LYS THR LYS PRO ARG GLU GLU GLN TYR ASN SER THR TYR SEQRES 6 A 212 ARG VAL VAL SER VAL LEU THR VAL LEU HIS GLN ASP TRP SEQRES 7 A 212 LEU ASN GLY LYS GLU TYR LYS CYS LYS VAL SER ASN LYS SEQRES 8 A 212 ALA LEU PRO ALA PRO ILE GLU LYS THR ILE SER LYS ALA SEQRES 9 A 212 LYS GLY GLN PRO ARG GLU PRO GLN VAL TYR THR LEU PRO SEQRES 10 A 212 PRO SER ARG ASP GLU LEU THR LYS ASN GLN VAL SER LEU SEQRES 11 A 212 THR CYS LEU VAL LYS GLY PHE TYR PRO SER ASP ILE ALA SEQRES 12 A 212 VAL GLU TRP GLU SER ASN GLY GLN PRO GLU ASN ASN TYR SEQRES 13 A 212 LYS THR THR PRO PRO VAL LEU ASP SER ASP GLY SER PHE SEQRES 14 A 212 PHE LEU TYR SER LYS LEU THR VAL ASP LYS SER ARG TRP SEQRES 15 A 212 GLN GLN GLY ASN VAL PHE SER CYS SER VAL MET HIS GLU SEQRES 16 A 212 ALA LEU HIS ASN HIS TYR THR GLN LYS SER LEU SER LEU SEQRES 17 A 212 SER PRO GLY LYS SEQRES 1 B 212 GLY GLY PRO SER VAL PHE LEU PHE PRO PRO LYS PRO LYS SEQRES 2 B 212 ASP THR LEU MET ILE SER ARG THR PRO GLU VAL THR CYS SEQRES 3 B 212 VAL VAL VAL ASP VAL SER HIS GLU ASP PRO GLU VAL LYS SEQRES 4 B 212 PHE ASN TRP TYR VAL ASP GLY VAL GLU VAL HIS ASN ALA SEQRES 5 B 212 LYS THR LYS PRO ARG GLU GLU GLN TYR ASN SER THR TYR SEQRES 6 B 212 ARG VAL VAL SER VAL LEU THR VAL LEU HIS GLN ASP TRP SEQRES 7 B 212 LEU ASN GLY LYS GLU TYR LYS CYS LYS VAL SER ASN LYS SEQRES 8 B 212 ALA LEU PRO ALA PRO ILE GLU LYS THR ILE SER LYS ALA SEQRES 9 B 212 LYS GLY GLN PRO ARG GLU PRO GLN VAL TYR THR LEU PRO SEQRES 10 B 212 PRO SER ARG ASP GLU LEU THR LYS ASN GLN VAL SER LEU SEQRES 11 B 212 THR CYS LEU VAL LYS GLY PHE TYR PRO SER ASP ILE ALA SEQRES 12 B 212 VAL GLU TRP GLU SER ASN GLY GLN PRO GLU ASN ASN TYR SEQRES 13 B 212 LYS THR THR PRO PRO VAL LEU ASP SER ASP GLY SER PHE SEQRES 14 B 212 PHE LEU TYR SER LYS LEU THR VAL ASP LYS SER ARG TRP SEQRES 15 B 212 GLN GLN GLY ASN VAL PHE SER CYS SER VAL MET HIS GLU SEQRES 16 B 212 ALA LEU HIS ASN HIS TYR THR GLN LYS SER LEU SER LEU SEQRES 17 B 212 SER PRO GLY LYS SEQRES 1 C 34 PHE ASN MET GLN CYS GLN ARG ARG PHE TYR GLU ALA LEU SEQRES 2 C 34 HIS ASP PRO ASN LEU ASN GLU GLU GLN ARG ASN ALA LYS SEQRES 3 C 34 ILE LYS SER ILE ARG ASP ASP CYS SEQRES 1 D 34 PHE ASN MET GLN CYS GLN ARG ARG PHE TYR GLU ALA LEU SEQRES 2 D 34 HIS ASP PRO ASN LEU ASN GLU GLU GLN ARG ASN ALA LYS SEQRES 3 D 34 ILE LYS SER ILE ARG ASP ASP CYS MODRES 1OQX ASN A 297 ASN GLYCOSYLATION SITE MODRES 1OQX ASN B 297 ASN GLYCOSYLATION SITE HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HET MAN E 4 11 HET MAN E 5 11 HET FUL E 6 10 HET NAG F 1 14 HET NAG F 2 14 HET BMA F 3 11 HET MAN F 4 11 HET BMA F 5 11 HET FUC F 6 10 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM FUL BETA-L-FUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN FUL BETA-L-FUCOSE; 6-DEOXY-BETA-L-GALACTOPYRANOSE; L- HETSYN 2 FUL FUCOSE; FUCOSE; 6-DEOXY-BETA-L-GALACTOSE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 5 NAG 4(C8 H15 N O6) FORMUL 5 BMA 3(C6 H12 O6) FORMUL 5 MAN 3(C6 H12 O6) FORMUL 5 FUL C6 H12 O5 FORMUL 6 FUC C6 H12 O5 FORMUL 7 HOH *89(H2 O) HELIX 1 1 LYS A 246 MET A 252 1 7 HELIX 2 2 LEU A 309 ASN A 315 1 7 HELIX 3 3 SER A 354 LEU A 358 5 5 HELIX 4 4 LYS A 414 GLN A 419 1 6 HELIX 5 5 LEU A 432 TYR A 436 5 5 HELIX 6 6 LYS B 246 MET B 252 1 7 HELIX 7 7 LEU B 309 ASN B 315 1 7 HELIX 8 8 SER B 354 LEU B 358 5 5 HELIX 9 9 LYS B 414 GLN B 419 1 6 HELIX 10 10 LEU B 432 TYR B 436 5 5 HELIX 11 11 ASN C 7 HIS C 19 1 13 HELIX 12 12 ASN C 24 CYS C 39 1 16 HELIX 13 13 ASN D 7 ASP D 20 1 14 HELIX 14 14 ASN D 24 CYS D 39 1 16 SHEET 1 A 4 SER A 239 PHE A 243 0 SHEET 2 A 4 GLU A 258 VAL A 264 -1 O THR A 260 N PHE A 243 SHEET 3 A 4 TYR A 300 THR A 307 -1 O SER A 304 N CYS A 261 SHEET 4 A 4 LYS A 288 THR A 289 -1 N LYS A 288 O VAL A 305 SHEET 1 B 4 SER A 239 PHE A 243 0 SHEET 2 B 4 GLU A 258 VAL A 264 -1 O THR A 260 N PHE A 243 SHEET 3 B 4 TYR A 300 THR A 307 -1 O SER A 304 N CYS A 261 SHEET 4 B 4 GLU A 293 GLU A 294 -1 N GLU A 293 O ARG A 301 SHEET 1 C 4 VAL A 282 VAL A 284 0 SHEET 2 C 4 LYS A 274 VAL A 279 -1 N VAL A 279 O VAL A 282 SHEET 3 C 4 TYR A 319 SER A 324 -1 O LYS A 320 N TYR A 278 SHEET 4 C 4 ILE A 332 ILE A 336 -1 O LYS A 334 N CYS A 321 SHEET 1 D 4 GLN A 347 LEU A 351 0 SHEET 2 D 4 GLN A 362 PHE A 372 -1 O THR A 366 N LEU A 351 SHEET 3 D 4 PHE A 404 ASP A 413 -1 O LEU A 410 N LEU A 365 SHEET 4 D 4 TYR A 391 THR A 393 -1 N LYS A 392 O LYS A 409 SHEET 1 E 4 GLN A 347 LEU A 351 0 SHEET 2 E 4 GLN A 362 PHE A 372 -1 O THR A 366 N LEU A 351 SHEET 3 E 4 PHE A 404 ASP A 413 -1 O LEU A 410 N LEU A 365 SHEET 4 E 4 VAL A 397 LEU A 398 -1 N VAL A 397 O PHE A 405 SHEET 1 F 4 GLN A 386 GLU A 388 0 SHEET 2 F 4 ALA A 378 SER A 383 -1 N SER A 383 O GLN A 386 SHEET 3 F 4 PHE A 423 MET A 428 -1 O SER A 424 N GLU A 382 SHEET 4 F 4 THR A 437 LEU A 441 -1 O THR A 437 N VAL A 427 SHEET 1 G 4 SER B 239 PHE B 243 0 SHEET 2 G 4 GLU B 258 VAL B 266 -1 O THR B 260 N PHE B 243 SHEET 3 G 4 THR B 299 THR B 307 -1 O SER B 304 N CYS B 261 SHEET 4 G 4 ALA B 287 GLN B 295 -1 N LYS B 290 O VAL B 303 SHEET 1 H 4 VAL B 282 VAL B 284 0 SHEET 2 H 4 LYS B 274 VAL B 279 -1 N VAL B 279 O VAL B 282 SHEET 3 H 4 TYR B 319 SER B 324 -1 O LYS B 320 N TYR B 278 SHEET 4 H 4 ILE B 332 ILE B 336 -1 O ILE B 336 N TYR B 319 SHEET 1 I 4 GLN B 347 LEU B 351 0 SHEET 2 I 4 GLN B 362 PHE B 372 -1 O LEU B 368 N TYR B 349 SHEET 3 I 4 PHE B 404 ASP B 413 -1 O LEU B 410 N LEU B 365 SHEET 4 I 4 TYR B 391 THR B 393 -1 N LYS B 392 O LYS B 409 SHEET 1 J 4 GLN B 347 LEU B 351 0 SHEET 2 J 4 GLN B 362 PHE B 372 -1 O LEU B 368 N TYR B 349 SHEET 3 J 4 PHE B 404 ASP B 413 -1 O LEU B 410 N LEU B 365 SHEET 4 J 4 VAL B 397 LEU B 398 -1 N VAL B 397 O PHE B 405 SHEET 1 K 4 GLN B 386 GLU B 388 0 SHEET 2 K 4 ALA B 378 SER B 383 -1 N SER B 383 O GLN B 386 SHEET 3 K 4 PHE B 423 MET B 428 -1 O SER B 426 N GLU B 380 SHEET 4 K 4 THR B 437 LEU B 441 -1 O LYS B 439 N CYS B 425 SSBOND 1 CYS A 261 CYS A 321 1555 1555 2.04 SSBOND 2 CYS A 367 CYS A 425 1555 1555 2.03 SSBOND 3 CYS B 261 CYS B 321 1555 1555 2.03 SSBOND 4 CYS B 367 CYS B 425 1555 1555 2.02 SSBOND 5 CYS C 10 CYS C 39 1555 1555 2.03 SSBOND 6 CYS D 10 CYS D 39 1555 1555 2.02 LINK ND2 ASN A 297 C1 NAG E 1 1555 1555 1.45 LINK ND2 ASN B 297 C1 NAG F 1 1555 1555 1.45 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.38 LINK O6 NAG E 1 C1 FUL E 6 1555 1555 1.41 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.38 LINK O3 BMA E 3 C1 MAN E 4 1555 1555 1.40 LINK O6 BMA E 3 C1 MAN E 5 1555 1555 1.40 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.38 LINK O6 NAG F 1 C1 FUC F 6 1555 1555 1.40 LINK O4 NAG F 2 C1 BMA F 3 1555 1555 1.37 LINK O3 BMA F 3 C1 MAN F 4 1555 1555 1.40 LINK O6 BMA F 3 C1 BMA F 5 1555 1555 1.39 CISPEP 1 TYR A 373 PRO A 374 0 -0.81 CISPEP 2 TYR B 373 PRO B 374 0 -0.15 CRYST1 87.430 125.680 53.640 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011438 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007957 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018643 0.00000