data_1ORN # _entry.id 1ORN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1ORN NDB PD0396 RCSB RCSB018599 WWPDB D_1000018599 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2ABK 'Structure of E. coli endonuclease III without DNA' unspecified PDB 1ORP 'STRUCTURE OF A TRAPPED ENDONUCLEASE III-DNA COVALENT INTERMEDIATE: ESTRANGED-ADENINE COMPLEX' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1ORN _pdbx_database_status.recvd_initial_deposition_date 2003-03-14 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Fromme, J.C.' 1 'Verdine, G.L.' 2 # _citation.id primary _citation.title 'Structure of a Trapped Endonuclease III-DNA Covalent Intermediate' _citation.journal_abbrev 'Embo J.' _citation.journal_volume 22 _citation.page_first 3461 _citation.page_last 3471 _citation.year 2003 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12840008 _citation.pdbx_database_id_DOI 10.1093/emboj/cdg311 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Fromme, J.C.' 1 primary 'Verdine, G.L.' 2 # _cell.entry_id 1ORN _cell.length_a 67.826 _cell.length_b 106.828 _cell.length_c 41.708 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ORN _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*AP*AP*GP*AP*CP*GP*TP*GP*GP*AP*C)-3'" 3407.249 1 ? ? ? ? 2 polymer syn "5'-D(*T*GP*TP*CP*CP*AP*(PED)P*GP*TP*CP*T)-3'" 3193.089 1 ? ? ? ? 3 polymer man 'Endonuclease III' 26234.816 1 ? ? ? ? 4 non-polymer syn 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 122.143 1 ? ? ? ? 5 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 6 non-polymer syn 'IRON/SULFUR CLUSTER' 351.640 1 ? ? ? ? 7 water nat water 18.015 105 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DA)(DA)(DG)(DA)(DC)(DG)(DT)(DG)(DG)(DA)(DC)' AAGACGTGGAC B ? 2 polydeoxyribonucleotide no yes '(DT)(DG)(DT)(DC)(DC)(DA)(PED)(DG)(DT)(DC)(DT)' TGTCCAXGTCT C ? 3 'polypeptide(L)' no no ;GSHMLTKQQIRYCLDEMAKMFPDAHCELVHRNPFELLIAVVLSAQCTDALVNKVTKRLFEKYRTPHDYIAVPLEELEQDI RSIGLYRNKARNIQKLCAMLIDKYNGEVPRDRDELMKLPGVGRKTANVVVSVAFGVPAIAVDTHVERVSKRLGFCRWDDS VLEVEKTLMKIIPKEEWSITHHRMIFFGRYHCKAQSPQCPSCPLLHLCREGKKRMRKREEKAANQK ; ;GSHMLTKQQIRYCLDEMAKMFPDAHCELVHRNPFELLIAVVLSAQCTDALVNKVTKRLFEKYRTPHDYIAVPLEELEQDI RSIGLYRNKARNIQKLCAMLIDKYNGEVPRDRDELMKLPGVGRKTANVVVSVAFGVPAIAVDTHVERVSKRLGFCRWDDS VLEVEKTLMKIIPKEEWSITHHRMIFFGRYHCKAQSPQCPSCPLLHLCREGKKRMRKREEKAANQK ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DA n 1 3 DG n 1 4 DA n 1 5 DC n 1 6 DG n 1 7 DT n 1 8 DG n 1 9 DG n 1 10 DA n 1 11 DC n 2 1 DT n 2 2 DG n 2 3 DT n 2 4 DC n 2 5 DC n 2 6 DA n 2 7 PED n 2 8 DG n 2 9 DT n 2 10 DC n 2 11 DT n 3 1 GLY n 3 2 SER n 3 3 HIS n 3 4 MET n 3 5 LEU n 3 6 THR n 3 7 LYS n 3 8 GLN n 3 9 GLN n 3 10 ILE n 3 11 ARG n 3 12 TYR n 3 13 CYS n 3 14 LEU n 3 15 ASP n 3 16 GLU n 3 17 MET n 3 18 ALA n 3 19 LYS n 3 20 MET n 3 21 PHE n 3 22 PRO n 3 23 ASP n 3 24 ALA n 3 25 HIS n 3 26 CYS n 3 27 GLU n 3 28 LEU n 3 29 VAL n 3 30 HIS n 3 31 ARG n 3 32 ASN n 3 33 PRO n 3 34 PHE n 3 35 GLU n 3 36 LEU n 3 37 LEU n 3 38 ILE n 3 39 ALA n 3 40 VAL n 3 41 VAL n 3 42 LEU n 3 43 SER n 3 44 ALA n 3 45 GLN n 3 46 CYS n 3 47 THR n 3 48 ASP n 3 49 ALA n 3 50 LEU n 3 51 VAL n 3 52 ASN n 3 53 LYS n 3 54 VAL n 3 55 THR n 3 56 LYS n 3 57 ARG n 3 58 LEU n 3 59 PHE n 3 60 GLU n 3 61 LYS n 3 62 TYR n 3 63 ARG n 3 64 THR n 3 65 PRO n 3 66 HIS n 3 67 ASP n 3 68 TYR n 3 69 ILE n 3 70 ALA n 3 71 VAL n 3 72 PRO n 3 73 LEU n 3 74 GLU n 3 75 GLU n 3 76 LEU n 3 77 GLU n 3 78 GLN n 3 79 ASP n 3 80 ILE n 3 81 ARG n 3 82 SER n 3 83 ILE n 3 84 GLY n 3 85 LEU n 3 86 TYR n 3 87 ARG n 3 88 ASN n 3 89 LYS n 3 90 ALA n 3 91 ARG n 3 92 ASN n 3 93 ILE n 3 94 GLN n 3 95 LYS n 3 96 LEU n 3 97 CYS n 3 98 ALA n 3 99 MET n 3 100 LEU n 3 101 ILE n 3 102 ASP n 3 103 LYS n 3 104 TYR n 3 105 ASN n 3 106 GLY n 3 107 GLU n 3 108 VAL n 3 109 PRO n 3 110 ARG n 3 111 ASP n 3 112 ARG n 3 113 ASP n 3 114 GLU n 3 115 LEU n 3 116 MET n 3 117 LYS n 3 118 LEU n 3 119 PRO n 3 120 GLY n 3 121 VAL n 3 122 GLY n 3 123 ARG n 3 124 LYS n 3 125 THR n 3 126 ALA n 3 127 ASN n 3 128 VAL n 3 129 VAL n 3 130 VAL n 3 131 SER n 3 132 VAL n 3 133 ALA n 3 134 PHE n 3 135 GLY n 3 136 VAL n 3 137 PRO n 3 138 ALA n 3 139 ILE n 3 140 ALA n 3 141 VAL n 3 142 ASP n 3 143 THR n 3 144 HIS n 3 145 VAL n 3 146 GLU n 3 147 ARG n 3 148 VAL n 3 149 SER n 3 150 LYS n 3 151 ARG n 3 152 LEU n 3 153 GLY n 3 154 PHE n 3 155 CYS n 3 156 ARG n 3 157 TRP n 3 158 ASP n 3 159 ASP n 3 160 SER n 3 161 VAL n 3 162 LEU n 3 163 GLU n 3 164 VAL n 3 165 GLU n 3 166 LYS n 3 167 THR n 3 168 LEU n 3 169 MET n 3 170 LYS n 3 171 ILE n 3 172 ILE n 3 173 PRO n 3 174 LYS n 3 175 GLU n 3 176 GLU n 3 177 TRP n 3 178 SER n 3 179 ILE n 3 180 THR n 3 181 HIS n 3 182 HIS n 3 183 ARG n 3 184 MET n 3 185 ILE n 3 186 PHE n 3 187 PHE n 3 188 GLY n 3 189 ARG n 3 190 TYR n 3 191 HIS n 3 192 CYS n 3 193 LYS n 3 194 ALA n 3 195 GLN n 3 196 SER n 3 197 PRO n 3 198 GLN n 3 199 CYS n 3 200 PRO n 3 201 SER n 3 202 CYS n 3 203 PRO n 3 204 LEU n 3 205 LEU n 3 206 HIS n 3 207 LEU n 3 208 CYS n 3 209 ARG n 3 210 GLU n 3 211 GLY n 3 212 LYS n 3 213 LYS n 3 214 ARG n 3 215 MET n 3 216 ARG n 3 217 LYS n 3 218 ARG n 3 219 GLU n 3 220 GLU n 3 221 LYS n 3 222 ALA n 3 223 ALA n 3 224 ASN n 3 225 GLN n 3 226 LYS n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Geobacillus _entity_src_gen.pdbx_gene_src_gene nth _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Geobacillus stearothermophilus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1422 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(C41)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 1 PDB 1ORN 1ORN ? ? ? 2 2 PDB 1ORN 1ORN ? ? ? 3 3 PDB 1ORN 1ORN ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1ORN B 1 ? 11 ? 1ORN 1 ? 11 ? 1 11 2 2 1ORN C 1 ? 11 ? 1ORN 12 ? 22 ? 12 22 3 3 1ORN A 1 ? 226 ? 1ORN -2 ? 223 ? -2 223 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PED non-polymer . PENTANE-3,4-DIOL-5-PHOSPHATE ;OPEN FORM OF 1'-2'-DIDEOXYRIBOFURANOSE-5'-PHOSPHATE ; 'C5 H13 O6 P' 200.127 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SF4 non-polymer . 'IRON/SULFUR CLUSTER' ? 'Fe4 S4' 351.640 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TRS non-polymer . 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 'TRIS BUFFER' 'C4 H12 N O3 1' 122.143 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1ORN _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.46 _exptl_crystal.density_percent_sol 49.51 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details 'PEG 8000, Tris, beta-mercaptoethanol , pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'PEG 8000' ? ? ? 1 2 1 Tris ? ? ? 1 3 1 beta-mercaptoethanol ? ? ? 1 4 2 'PEG 8000' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2003-01-19 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9363 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'CHESS BEAMLINE A1' _diffrn_source.pdbx_synchrotron_site CHESS _diffrn_source.pdbx_synchrotron_beamline A1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9363 # _reflns.entry_id 1ORN _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30 _reflns.d_resolution_high 1.7 _reflns.number_obs 33490 _reflns.number_all 33952 _reflns.percent_possible_obs 98.6 _reflns.pdbx_Rmerge_I_obs 0.057 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 23.8 _reflns.B_iso_Wilson_estimate 30.4 _reflns.pdbx_redundancy 7.3 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.70 _reflns_shell.d_res_low 1.76 _reflns_shell.percent_possible_all 99.6 _reflns_shell.Rmerge_I_obs 0.418 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.0 _reflns_shell.pdbx_redundancy 4.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3328 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1ORN _refine.ls_number_reflns_obs 32871 _refine.ls_number_reflns_all 34157 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 1581342.02 _refine.pdbx_data_cutoff_low_absF 0.0 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 29.58 _refine.ls_d_res_high 1.70 _refine.ls_percent_reflns_obs 96.5 _refine.ls_R_factor_obs 0.235 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.235 _refine.ls_R_factor_R_free 0.248 _refine.ls_R_factor_R_free_error 0.005 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 7.6 _refine.ls_number_reflns_R_free 2492 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 39.5 _refine.aniso_B[1][1] 4.70 _refine.aniso_B[2][2] -7.74 _refine.aniso_B[3][3] 3.04 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.40271 _refine.solvent_model_param_bsol 60.323 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MIR _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1ORN _refine_analyze.Luzzati_coordinate_error_obs 0.24 _refine_analyze.Luzzati_sigma_a_obs 0.22 _refine_analyze.Luzzati_d_res_low_obs 5.0 _refine_analyze.Luzzati_coordinate_error_free 0.27 _refine_analyze.Luzzati_sigma_a_free 0.24 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1659 _refine_hist.pdbx_number_atoms_nucleic_acid 417 _refine_hist.pdbx_number_atoms_ligand 17 _refine_hist.number_atoms_solvent 105 _refine_hist.number_atoms_total 2198 _refine_hist.d_res_high 1.70 _refine_hist.d_res_low 29.58 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.1 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 18.9 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.88 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.20 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 1.78 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 4.51 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 5.33 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 1.70 _refine_ls_shell.d_res_low 1.76 _refine_ls_shell.number_reflns_R_work 2669 _refine_ls_shell.R_factor_R_work 0.328 _refine_ls_shell.percent_reflns_obs 86.4 _refine_ls_shell.R_factor_R_free 0.321 _refine_ls_shell.R_factor_R_free_error 0.021 _refine_ls_shell.percent_reflns_R_free 8.1 _refine_ls_shell.number_reflns_R_free 235 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 DNA-RNA_REP.PARAM DNA-RNA.TOP 'X-RAY DIFFRACTION' 3 ION.PARAM ION.TOP 'X-RAY DIFFRACTION' 4 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 5 PED_FS4_TRS.PARAM PED_FS4_TRS.TOP 'X-RAY DIFFRACTION' # _struct.entry_id 1ORN _struct.title 'Structure of a Trapped Endonuclease III-DNA Covalent Intermediate: Estranged-Guanine Complex' _struct.pdbx_descriptor 'ENDONUCLEASE III/DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1ORN _struct_keywords.pdbx_keywords HYDROLASE/DNA _struct_keywords.text 'DNA repair, DNA glycosylase, [4Fe-4S] cluster, iron-sulfur cluster, HYDROLASE-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? H N N 7 ? I N N 7 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR C 6 ? PHE C 21 ? THR A 3 PHE A 18 1 ? 16 HELX_P HELX_P2 2 ASN C 32 ? ALA C 44 ? ASN A 29 ALA A 41 1 ? 13 HELX_P HELX_P3 3 THR C 47 ? TYR C 62 ? THR A 44 TYR A 59 1 ? 16 HELX_P HELX_P4 4 THR C 64 ? ALA C 70 ? THR A 61 ALA A 67 1 ? 7 HELX_P HELX_P5 5 PRO C 72 ? ILE C 80 ? PRO A 69 ILE A 77 1 ? 9 HELX_P HELX_P6 6 ARG C 81 ? GLY C 84 ? ARG A 78 GLY A 81 5 ? 4 HELX_P HELX_P7 7 LEU C 85 ? TYR C 104 ? LEU A 82 TYR A 101 1 ? 20 HELX_P HELX_P8 8 ASP C 111 ? MET C 116 ? ASP A 108 MET A 113 1 ? 6 HELX_P HELX_P9 9 GLY C 122 ? GLY C 135 ? GLY A 119 GLY A 132 1 ? 14 HELX_P HELX_P10 10 ASP C 142 ? GLY C 153 ? ASP A 139 GLY A 150 1 ? 12 HELX_P HELX_P11 11 SER C 160 ? ILE C 172 ? SER A 157 ILE A 169 1 ? 13 HELX_P HELX_P12 12 PRO C 173 ? GLU C 175 ? PRO A 170 GLU A 172 5 ? 3 HELX_P HELX_P13 13 GLU C 176 ? HIS C 191 ? GLU A 173 HIS A 188 1 ? 16 HELX_P HELX_P14 14 GLN C 198 ? CYS C 202 ? GLN A 195 CYS A 199 5 ? 5 HELX_P HELX_P15 15 LEU C 204 ? LEU C 207 ? LEU A 201 LEU A 204 5 ? 4 HELX_P HELX_P16 16 CYS C 208 ? ARG C 216 ? CYS A 205 ARG A 213 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? F SF4 . FE1 ? ? ? 1_555 C CYS 202 SG ? ? A SF4 300 A CYS 199 1_555 ? ? ? ? ? ? ? 2.330 ? metalc2 metalc ? ? F SF4 . FE2 ? ? ? 1_555 C CYS 192 SG ? ? A SF4 300 A CYS 189 1_555 ? ? ? ? ? ? ? 2.393 ? metalc3 metalc ? ? F SF4 . FE3 ? ? ? 1_555 C CYS 199 SG ? ? A SF4 300 A CYS 196 1_555 ? ? ? ? ? ? ? 2.548 ? metalc4 metalc ? ? F SF4 . FE4 ? ? ? 1_555 C CYS 208 SG ? ? A SF4 300 A CYS 205 1_555 ? ? ? ? ? ? ? 2.449 ? covale1 covale ? ? B PED 7 "C1'" ? ? ? 1_555 C LYS 124 NZ ? ? C PED 18 A LYS 121 1_555 ? ? ? ? ? ? ? 1.470 ? metalc5 metalc ? ? B DC 10 OP1 ? ? ? 1_555 E NA . NA ? ? C DC 21 A NA 224 1_555 ? ? ? ? ? ? ? 2.565 ? metalc6 metalc ? ? C MET 116 O ? ? ? 1_555 E NA . NA ? ? A MET 113 A NA 224 1_555 ? ? ? ? ? ? ? 2.385 ? metalc7 metalc ? ? C LEU 118 O ? ? ? 1_555 E NA . NA ? ? A LEU 115 A NA 224 1_555 ? ? ? ? ? ? ? 2.393 ? metalc8 metalc ? ? C VAL 121 O ? ? ? 1_555 E NA . NA ? ? A VAL 118 A NA 224 1_555 ? ? ? ? ? ? ? 2.468 ? metalc9 metalc ? ? E NA . NA ? ? ? 1_555 I HOH . O ? ? A NA 224 A HOH 345 1_555 ? ? ? ? ? ? ? 2.330 ? metalc10 metalc ? ? E NA . NA ? ? ? 1_555 H HOH . O ? ? A NA 224 C HOH 210 1_555 ? ? ? ? ? ? ? 2.573 ? covale2 covale ? ? B DA 6 "O3'" ? ? ? 1_555 B PED 7 P ? ? C DA 17 C PED 18 1_555 ? ? ? ? ? ? ? 1.600 ? covale3 covale ? ? B PED 7 "O3'" ? ? ? 1_555 B DG 8 P ? ? C PED 18 C DG 19 1_555 ? ? ? ? ? ? ? 1.598 ? hydrog1 hydrog ? ? A DA 2 N1 ? ? ? 1_555 B DT 11 N3 ? ? B DA 2 C DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog2 hydrog ? ? A DA 2 N6 ? ? ? 1_555 B DT 11 O4 ? ? B DA 2 C DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog3 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 10 N3 ? ? B DG 3 C DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog4 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 10 O2 ? ? B DG 3 C DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog5 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 10 N4 ? ? B DG 3 C DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog6 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 9 N3 ? ? B DA 4 C DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog7 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 9 O4 ? ? B DA 4 C DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog8 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 8 N1 ? ? B DC 5 C DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog9 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 8 O6 ? ? B DC 5 C DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog10 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 8 N2 ? ? B DC 5 C DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog11 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B DA 6 N1 ? ? B DT 7 C DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog12 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B DA 6 N6 ? ? B DT 7 C DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog13 hydrog ? ? A DG 8 N1 ? ? ? 1_555 B DC 5 N3 ? ? B DG 8 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog14 hydrog ? ? A DG 8 N2 ? ? ? 1_555 B DC 5 O2 ? ? B DG 8 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog15 hydrog ? ? A DG 8 O6 ? ? ? 1_555 B DC 5 N4 ? ? B DG 8 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog16 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 4 N3 ? ? B DG 9 C DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog17 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 4 O2 ? ? B DG 9 C DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog18 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 4 N4 ? ? B DG 9 C DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog19 hydrog ? ? A DA 10 N1 ? ? ? 1_555 B DT 3 N3 ? ? B DA 10 C DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog20 hydrog ? ? A DA 10 N6 ? ? ? 1_555 B DT 3 O4 ? ? B DA 10 C DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog21 hydrog ? ? A DC 11 N3 ? ? ? 1_555 B DG 2 N1 ? ? B DC 11 C DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog22 hydrog ? ? A DC 11 N4 ? ? ? 1_555 B DG 2 O6 ? ? B DC 11 C DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog23 hydrog ? ? A DC 11 O2 ? ? ? 1_555 B DG 2 N2 ? ? B DC 11 C DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? covale ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE NA A 224' AC2 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE SF4 A 300' AC3 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE TRS C 200' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 MET C 116 ? MET A 113 . ? 1_555 ? 2 AC1 6 LEU C 118 ? LEU A 115 . ? 1_555 ? 3 AC1 6 VAL C 121 ? VAL A 118 . ? 1_555 ? 4 AC1 6 HOH I . ? HOH A 345 . ? 1_555 ? 5 AC1 6 DC B 10 ? DC C 21 . ? 1_555 ? 6 AC1 6 HOH H . ? HOH C 210 . ? 1_555 ? 7 AC2 8 LEU C 152 ? LEU A 149 . ? 1_555 ? 8 AC2 8 PHE C 187 ? PHE A 184 . ? 1_555 ? 9 AC2 8 CYS C 192 ? CYS A 189 . ? 1_555 ? 10 AC2 8 CYS C 199 ? CYS A 196 . ? 1_555 ? 11 AC2 8 CYS C 202 ? CYS A 199 . ? 1_555 ? 12 AC2 8 CYS C 208 ? CYS A 205 . ? 1_555 ? 13 AC2 8 GLU C 210 ? GLU A 207 . ? 1_555 ? 14 AC2 8 GLY C 211 ? GLY A 208 . ? 1_555 ? 15 AC3 7 GLN C 45 ? GLN A 42 . ? 1_555 ? 16 AC3 7 DC A 5 ? DC B 5 . ? 1_555 ? 17 AC3 7 DG A 6 ? DG B 6 . ? 1_555 ? 18 AC3 7 DC B 5 ? DC C 16 . ? 1_555 ? 19 AC3 7 DA B 6 ? DA C 17 . ? 1_555 ? 20 AC3 7 DG B 8 ? DG C 19 . ? 1_555 ? 21 AC3 7 HOH H . ? HOH C 204 . ? 1_555 ? # _database_PDB_matrix.entry_id 1ORN _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1ORN _atom_sites.fract_transf_matrix[1][1] 0.014744 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009361 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023976 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE N NA O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 1 1 DA A B . n A 1 2 DA 2 2 2 DA A B . n A 1 3 DG 3 3 3 DG G B . n A 1 4 DA 4 4 4 DA A B . n A 1 5 DC 5 5 5 DC C B . n A 1 6 DG 6 6 6 DG G B . n A 1 7 DT 7 7 7 DT T B . n A 1 8 DG 8 8 8 DG G B . n A 1 9 DG 9 9 9 DG G B . n A 1 10 DA 10 10 10 DA A B . n A 1 11 DC 11 11 11 DC C B . n B 2 1 DT 1 12 ? ? ? C . n B 2 2 DG 2 13 13 DG G C . n B 2 3 DT 3 14 14 DT T C . n B 2 4 DC 4 15 15 DC C C . n B 2 5 DC 5 16 16 DC C C . n B 2 6 DA 6 17 17 DA A C . n B 2 7 PED 7 18 18 PED PED C . n B 2 8 DG 8 19 19 DG G C . n B 2 9 DT 9 20 20 DT T C . n B 2 10 DC 10 21 21 DC C C . n B 2 11 DT 11 22 22 DT T C . n C 3 1 GLY 1 -2 ? ? ? A . n C 3 2 SER 2 -1 ? ? ? A . n C 3 3 HIS 3 0 ? ? ? A . n C 3 4 MET 4 1 1 MET MET A . n C 3 5 LEU 5 2 2 LEU LEU A . n C 3 6 THR 6 3 3 THR THR A . n C 3 7 LYS 7 4 4 LYS LYS A . n C 3 8 GLN 8 5 5 GLN GLN A . n C 3 9 GLN 9 6 6 GLN GLN A . n C 3 10 ILE 10 7 7 ILE ILE A . n C 3 11 ARG 11 8 8 ARG ARG A . n C 3 12 TYR 12 9 9 TYR TYR A . n C 3 13 CYS 13 10 10 CYS CYS A . n C 3 14 LEU 14 11 11 LEU LEU A . n C 3 15 ASP 15 12 12 ASP ASP A . n C 3 16 GLU 16 13 13 GLU GLU A . n C 3 17 MET 17 14 14 MET MET A . n C 3 18 ALA 18 15 15 ALA ALA A . n C 3 19 LYS 19 16 16 LYS LYS A . n C 3 20 MET 20 17 17 MET MET A . n C 3 21 PHE 21 18 18 PHE PHE A . n C 3 22 PRO 22 19 19 PRO PRO A . n C 3 23 ASP 23 20 20 ASP ASP A . n C 3 24 ALA 24 21 21 ALA ALA A . n C 3 25 HIS 25 22 22 HIS HIS A . n C 3 26 CYS 26 23 23 CYS CYS A . n C 3 27 GLU 27 24 24 GLU GLU A . n C 3 28 LEU 28 25 25 LEU LEU A . n C 3 29 VAL 29 26 26 VAL VAL A . n C 3 30 HIS 30 27 27 HIS HIS A . n C 3 31 ARG 31 28 28 ARG ARG A . n C 3 32 ASN 32 29 29 ASN ASN A . n C 3 33 PRO 33 30 30 PRO PRO A . n C 3 34 PHE 34 31 31 PHE PHE A . n C 3 35 GLU 35 32 32 GLU GLU A . n C 3 36 LEU 36 33 33 LEU LEU A . n C 3 37 LEU 37 34 34 LEU LEU A . n C 3 38 ILE 38 35 35 ILE ILE A . n C 3 39 ALA 39 36 36 ALA ALA A . n C 3 40 VAL 40 37 37 VAL VAL A . n C 3 41 VAL 41 38 38 VAL VAL A . n C 3 42 LEU 42 39 39 LEU LEU A . n C 3 43 SER 43 40 40 SER SER A . n C 3 44 ALA 44 41 41 ALA ALA A . n C 3 45 GLN 45 42 42 GLN GLN A . n C 3 46 CYS 46 43 43 CYS CYS A . n C 3 47 THR 47 44 44 THR THR A . n C 3 48 ASP 48 45 45 ASP ASP A . n C 3 49 ALA 49 46 46 ALA ALA A . n C 3 50 LEU 50 47 47 LEU LEU A . n C 3 51 VAL 51 48 48 VAL VAL A . n C 3 52 ASN 52 49 49 ASN ASN A . n C 3 53 LYS 53 50 50 LYS LYS A . n C 3 54 VAL 54 51 51 VAL VAL A . n C 3 55 THR 55 52 52 THR THR A . n C 3 56 LYS 56 53 53 LYS LYS A . n C 3 57 ARG 57 54 54 ARG ARG A . n C 3 58 LEU 58 55 55 LEU LEU A . n C 3 59 PHE 59 56 56 PHE PHE A . n C 3 60 GLU 60 57 57 GLU GLU A . n C 3 61 LYS 61 58 58 LYS LYS A . n C 3 62 TYR 62 59 59 TYR TYR A . n C 3 63 ARG 63 60 60 ARG ARG A . n C 3 64 THR 64 61 61 THR THR A . n C 3 65 PRO 65 62 62 PRO PRO A . n C 3 66 HIS 66 63 63 HIS HIS A . n C 3 67 ASP 67 64 64 ASP ASP A . n C 3 68 TYR 68 65 65 TYR TYR A . n C 3 69 ILE 69 66 66 ILE ILE A . n C 3 70 ALA 70 67 67 ALA ALA A . n C 3 71 VAL 71 68 68 VAL VAL A . n C 3 72 PRO 72 69 69 PRO PRO A . n C 3 73 LEU 73 70 70 LEU LEU A . n C 3 74 GLU 74 71 71 GLU GLU A . n C 3 75 GLU 75 72 72 GLU GLU A . n C 3 76 LEU 76 73 73 LEU LEU A . n C 3 77 GLU 77 74 74 GLU GLU A . n C 3 78 GLN 78 75 75 GLN GLN A . n C 3 79 ASP 79 76 76 ASP ASP A . n C 3 80 ILE 80 77 77 ILE ILE A . n C 3 81 ARG 81 78 78 ARG ARG A . n C 3 82 SER 82 79 79 SER SER A . n C 3 83 ILE 83 80 80 ILE ILE A . n C 3 84 GLY 84 81 81 GLY GLY A . n C 3 85 LEU 85 82 82 LEU LEU A . n C 3 86 TYR 86 83 83 TYR TYR A . n C 3 87 ARG 87 84 84 ARG ARG A . n C 3 88 ASN 88 85 85 ASN ASN A . n C 3 89 LYS 89 86 86 LYS LYS A . n C 3 90 ALA 90 87 87 ALA ALA A . n C 3 91 ARG 91 88 88 ARG ARG A . n C 3 92 ASN 92 89 89 ASN ASN A . n C 3 93 ILE 93 90 90 ILE ILE A . n C 3 94 GLN 94 91 91 GLN GLN A . n C 3 95 LYS 95 92 92 LYS LYS A . n C 3 96 LEU 96 93 93 LEU LEU A . n C 3 97 CYS 97 94 94 CYS CYS A . n C 3 98 ALA 98 95 95 ALA ALA A . n C 3 99 MET 99 96 96 MET MET A . n C 3 100 LEU 100 97 97 LEU LEU A . n C 3 101 ILE 101 98 98 ILE ILE A . n C 3 102 ASP 102 99 99 ASP ASP A . n C 3 103 LYS 103 100 100 LYS LYS A . n C 3 104 TYR 104 101 101 TYR TYR A . n C 3 105 ASN 105 102 102 ASN ASN A . n C 3 106 GLY 106 103 103 GLY GLY A . n C 3 107 GLU 107 104 104 GLU GLU A . n C 3 108 VAL 108 105 105 VAL VAL A . n C 3 109 PRO 109 106 106 PRO PRO A . n C 3 110 ARG 110 107 107 ARG ARG A . n C 3 111 ASP 111 108 108 ASP ASP A . n C 3 112 ARG 112 109 109 ARG ARG A . n C 3 113 ASP 113 110 110 ASP ASP A . n C 3 114 GLU 114 111 111 GLU GLU A . n C 3 115 LEU 115 112 112 LEU LEU A . n C 3 116 MET 116 113 113 MET MET A . n C 3 117 LYS 117 114 114 LYS LYS A . n C 3 118 LEU 118 115 115 LEU LEU A . n C 3 119 PRO 119 116 116 PRO PRO A . n C 3 120 GLY 120 117 117 GLY GLY A . n C 3 121 VAL 121 118 118 VAL VAL A . n C 3 122 GLY 122 119 119 GLY GLY A . n C 3 123 ARG 123 120 120 ARG ARG A . n C 3 124 LYS 124 121 121 LYS LYS A . n C 3 125 THR 125 122 122 THR THR A . n C 3 126 ALA 126 123 123 ALA ALA A . n C 3 127 ASN 127 124 124 ASN ASN A . n C 3 128 VAL 128 125 125 VAL VAL A . n C 3 129 VAL 129 126 126 VAL VAL A . n C 3 130 VAL 130 127 127 VAL VAL A . n C 3 131 SER 131 128 128 SER SER A . n C 3 132 VAL 132 129 129 VAL VAL A . n C 3 133 ALA 133 130 130 ALA ALA A . n C 3 134 PHE 134 131 131 PHE PHE A . n C 3 135 GLY 135 132 132 GLY GLY A . n C 3 136 VAL 136 133 133 VAL VAL A . n C 3 137 PRO 137 134 134 PRO PRO A . n C 3 138 ALA 138 135 135 ALA ALA A . n C 3 139 ILE 139 136 136 ILE ILE A . n C 3 140 ALA 140 137 137 ALA ALA A . n C 3 141 VAL 141 138 138 VAL VAL A . n C 3 142 ASP 142 139 139 ASP ASP A . n C 3 143 THR 143 140 140 THR THR A . n C 3 144 HIS 144 141 141 HIS HIS A . n C 3 145 VAL 145 142 142 VAL VAL A . n C 3 146 GLU 146 143 143 GLU GLU A . n C 3 147 ARG 147 144 144 ARG ARG A . n C 3 148 VAL 148 145 145 VAL VAL A . n C 3 149 SER 149 146 146 SER SER A . n C 3 150 LYS 150 147 147 LYS LYS A . n C 3 151 ARG 151 148 148 ARG ARG A . n C 3 152 LEU 152 149 149 LEU LEU A . n C 3 153 GLY 153 150 150 GLY GLY A . n C 3 154 PHE 154 151 151 PHE PHE A . n C 3 155 CYS 155 152 152 CYS CYS A . n C 3 156 ARG 156 153 153 ARG ARG A . n C 3 157 TRP 157 154 154 TRP TRP A . n C 3 158 ASP 158 155 155 ASP ASP A . n C 3 159 ASP 159 156 156 ASP ASP A . n C 3 160 SER 160 157 157 SER SER A . n C 3 161 VAL 161 158 158 VAL VAL A . n C 3 162 LEU 162 159 159 LEU LEU A . n C 3 163 GLU 163 160 160 GLU GLU A . n C 3 164 VAL 164 161 161 VAL VAL A . n C 3 165 GLU 165 162 162 GLU GLU A . n C 3 166 LYS 166 163 163 LYS LYS A . n C 3 167 THR 167 164 164 THR THR A . n C 3 168 LEU 168 165 165 LEU LEU A . n C 3 169 MET 169 166 166 MET MET A . n C 3 170 LYS 170 167 167 LYS LYS A . n C 3 171 ILE 171 168 168 ILE ILE A . n C 3 172 ILE 172 169 169 ILE ILE A . n C 3 173 PRO 173 170 170 PRO PRO A . n C 3 174 LYS 174 171 171 LYS LYS A . n C 3 175 GLU 175 172 172 GLU GLU A . n C 3 176 GLU 176 173 173 GLU GLU A . n C 3 177 TRP 177 174 174 TRP TRP A . n C 3 178 SER 178 175 175 SER SER A . n C 3 179 ILE 179 176 176 ILE ILE A . n C 3 180 THR 180 177 177 THR THR A . n C 3 181 HIS 181 178 178 HIS HIS A . n C 3 182 HIS 182 179 179 HIS HIS A . n C 3 183 ARG 183 180 180 ARG ARG A . n C 3 184 MET 184 181 181 MET MET A . n C 3 185 ILE 185 182 182 ILE ILE A . n C 3 186 PHE 186 183 183 PHE PHE A . n C 3 187 PHE 187 184 184 PHE PHE A . n C 3 188 GLY 188 185 185 GLY GLY A . n C 3 189 ARG 189 186 186 ARG ARG A . n C 3 190 TYR 190 187 187 TYR TYR A . n C 3 191 HIS 191 188 188 HIS HIS A . n C 3 192 CYS 192 189 189 CYS CYS A . n C 3 193 LYS 193 190 190 LYS LYS A . n C 3 194 ALA 194 191 191 ALA ALA A . n C 3 195 GLN 195 192 192 GLN GLN A . n C 3 196 SER 196 193 193 SER SER A . n C 3 197 PRO 197 194 194 PRO PRO A . n C 3 198 GLN 198 195 195 GLN GLN A . n C 3 199 CYS 199 196 196 CYS CYS A . n C 3 200 PRO 200 197 197 PRO PRO A . n C 3 201 SER 201 198 198 SER SER A . n C 3 202 CYS 202 199 199 CYS CYS A . n C 3 203 PRO 203 200 200 PRO PRO A . n C 3 204 LEU 204 201 201 LEU LEU A . n C 3 205 LEU 205 202 202 LEU LEU A . n C 3 206 HIS 206 203 203 HIS HIS A . n C 3 207 LEU 207 204 204 LEU LEU A . n C 3 208 CYS 208 205 205 CYS CYS A . n C 3 209 ARG 209 206 206 ARG ARG A . n C 3 210 GLU 210 207 207 GLU GLU A . n C 3 211 GLY 211 208 208 GLY GLY A . n C 3 212 LYS 212 209 209 LYS LYS A . n C 3 213 LYS 213 210 210 LYS LYS A . n C 3 214 ARG 214 211 211 ARG ARG A . n C 3 215 MET 215 212 212 MET MET A . n C 3 216 ARG 216 213 213 ARG ARG A . n C 3 217 LYS 217 214 214 LYS LYS A . n C 3 218 ARG 218 215 ? ? ? A . n C 3 219 GLU 219 216 ? ? ? A . n C 3 220 GLU 220 217 ? ? ? A . n C 3 221 LYS 221 218 ? ? ? A . n C 3 222 ALA 222 219 ? ? ? A . n C 3 223 ALA 223 220 ? ? ? A . n C 3 224 ASN 224 221 ? ? ? A . n C 3 225 GLN 225 222 ? ? ? A . n C 3 226 LYS 226 223 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 TRS 1 200 200 TRS TRS C . E 5 NA 1 224 201 NA NA A . F 6 SF4 1 300 300 SF4 FS4 A . G 7 HOH 1 90 90 HOH HOH B . G 7 HOH 2 95 95 HOH HOH B . G 7 HOH 3 96 96 HOH HOH B . G 7 HOH 4 109 109 HOH HOH B . H 7 HOH 1 201 7 HOH HOH C . H 7 HOH 2 202 8 HOH HOH C . H 7 HOH 3 203 12 HOH HOH C . H 7 HOH 4 204 18 HOH HOH C . H 7 HOH 5 205 22 HOH HOH C . H 7 HOH 6 206 23 HOH HOH C . H 7 HOH 7 207 24 HOH HOH C . H 7 HOH 8 208 27 HOH HOH C . H 7 HOH 9 209 34 HOH HOH C . H 7 HOH 10 210 42 HOH HOH C . H 7 HOH 11 211 44 HOH HOH C . H 7 HOH 12 212 45 HOH HOH C . H 7 HOH 13 213 54 HOH HOH C . H 7 HOH 14 214 55 HOH HOH C . H 7 HOH 15 215 89 HOH HOH C . H 7 HOH 16 216 97 HOH HOH C . H 7 HOH 17 217 106 HOH HOH C . H 7 HOH 18 218 107 HOH HOH C . H 7 HOH 19 219 116 HOH HOH C . I 7 HOH 1 301 2 HOH HOH A . I 7 HOH 2 302 3 HOH HOH A . I 7 HOH 3 303 4 HOH HOH A . I 7 HOH 4 304 5 HOH HOH A . I 7 HOH 5 305 6 HOH HOH A . I 7 HOH 6 306 9 HOH HOH A . I 7 HOH 7 307 10 HOH HOH A . I 7 HOH 8 308 11 HOH HOH A . I 7 HOH 9 309 13 HOH HOH A . I 7 HOH 10 310 14 HOH HOH A . I 7 HOH 11 311 15 HOH HOH A . I 7 HOH 12 312 16 HOH HOH A . I 7 HOH 13 313 17 HOH HOH A . I 7 HOH 14 314 19 HOH HOH A . I 7 HOH 15 315 20 HOH HOH A . I 7 HOH 16 316 21 HOH HOH A . I 7 HOH 17 317 25 HOH HOH A . I 7 HOH 18 318 26 HOH HOH A . I 7 HOH 19 319 28 HOH HOH A . I 7 HOH 20 320 29 HOH HOH A . I 7 HOH 21 321 30 HOH HOH A . I 7 HOH 22 322 31 HOH HOH A . I 7 HOH 23 323 32 HOH HOH A . I 7 HOH 24 324 33 HOH HOH A . I 7 HOH 25 325 35 HOH HOH A . I 7 HOH 26 326 36 HOH HOH A . I 7 HOH 27 327 37 HOH HOH A . I 7 HOH 28 328 38 HOH HOH A . I 7 HOH 29 329 39 HOH HOH A . I 7 HOH 30 330 40 HOH HOH A . I 7 HOH 31 331 43 HOH HOH A . I 7 HOH 32 332 46 HOH HOH A . I 7 HOH 33 333 47 HOH HOH A . I 7 HOH 34 334 48 HOH HOH A . I 7 HOH 35 335 49 HOH HOH A . I 7 HOH 36 336 50 HOH HOH A . I 7 HOH 37 337 51 HOH HOH A . I 7 HOH 38 338 53 HOH HOH A . I 7 HOH 39 339 56 HOH HOH A . I 7 HOH 40 340 57 HOH HOH A . I 7 HOH 41 341 58 HOH HOH A . I 7 HOH 42 342 59 HOH HOH A . I 7 HOH 43 343 61 HOH HOH A . I 7 HOH 44 344 62 HOH HOH A . I 7 HOH 45 345 63 HOH HOH A . I 7 HOH 46 346 64 HOH HOH A . I 7 HOH 47 347 65 HOH HOH A . I 7 HOH 48 348 66 HOH HOH A . I 7 HOH 49 349 67 HOH HOH A . I 7 HOH 50 350 69 HOH HOH A . I 7 HOH 51 351 70 HOH HOH A . I 7 HOH 52 352 71 HOH HOH A . I 7 HOH 53 353 72 HOH HOH A . I 7 HOH 54 354 73 HOH HOH A . I 7 HOH 55 355 74 HOH HOH A . I 7 HOH 56 356 75 HOH HOH A . I 7 HOH 57 357 76 HOH HOH A . I 7 HOH 58 358 78 HOH HOH A . I 7 HOH 59 359 80 HOH HOH A . I 7 HOH 60 360 81 HOH HOH A . I 7 HOH 61 361 83 HOH HOH A . I 7 HOH 62 362 84 HOH HOH A . I 7 HOH 63 363 85 HOH HOH A . I 7 HOH 64 364 88 HOH HOH A . I 7 HOH 65 365 91 HOH HOH A . I 7 HOH 66 366 93 HOH HOH A . I 7 HOH 67 367 94 HOH HOH A . I 7 HOH 68 368 98 HOH HOH A . I 7 HOH 69 369 99 HOH HOH A . I 7 HOH 70 370 100 HOH HOH A . I 7 HOH 71 371 101 HOH HOH A . I 7 HOH 72 372 103 HOH HOH A . I 7 HOH 73 373 104 HOH HOH A . I 7 HOH 74 374 105 HOH HOH A . I 7 HOH 75 375 108 HOH HOH A . I 7 HOH 76 376 110 HOH HOH A . I 7 HOH 77 377 111 HOH HOH A . I 7 HOH 78 378 112 HOH HOH A . I 7 HOH 79 379 113 HOH HOH A . I 7 HOH 80 380 115 HOH HOH A . I 7 HOH 81 381 118 HOH HOH A . I 7 HOH 82 382 119 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? C CYS 202 ? A CYS 199 ? 1_555 FE1 ? F SF4 . ? A SF4 300 ? 1_555 S2 ? F SF4 . ? A SF4 300 ? 1_555 114.5 ? 2 SG ? C CYS 202 ? A CYS 199 ? 1_555 FE1 ? F SF4 . ? A SF4 300 ? 1_555 S3 ? F SF4 . ? A SF4 300 ? 1_555 118.1 ? 3 S2 ? F SF4 . ? A SF4 300 ? 1_555 FE1 ? F SF4 . ? A SF4 300 ? 1_555 S3 ? F SF4 . ? A SF4 300 ? 1_555 103.7 ? 4 SG ? C CYS 202 ? A CYS 199 ? 1_555 FE1 ? F SF4 . ? A SF4 300 ? 1_555 S4 ? F SF4 . ? A SF4 300 ? 1_555 115.2 ? 5 S2 ? F SF4 . ? A SF4 300 ? 1_555 FE1 ? F SF4 . ? A SF4 300 ? 1_555 S4 ? F SF4 . ? A SF4 300 ? 1_555 103.2 ? 6 S3 ? F SF4 . ? A SF4 300 ? 1_555 FE1 ? F SF4 . ? A SF4 300 ? 1_555 S4 ? F SF4 . ? A SF4 300 ? 1_555 99.9 ? 7 SG ? C CYS 192 ? A CYS 189 ? 1_555 FE2 ? F SF4 . ? A SF4 300 ? 1_555 S1 ? F SF4 . ? A SF4 300 ? 1_555 110.8 ? 8 SG ? C CYS 192 ? A CYS 189 ? 1_555 FE2 ? F SF4 . ? A SF4 300 ? 1_555 S3 ? F SF4 . ? A SF4 300 ? 1_555 112.9 ? 9 S1 ? F SF4 . ? A SF4 300 ? 1_555 FE2 ? F SF4 . ? A SF4 300 ? 1_555 S3 ? F SF4 . ? A SF4 300 ? 1_555 105.2 ? 10 SG ? C CYS 192 ? A CYS 189 ? 1_555 FE2 ? F SF4 . ? A SF4 300 ? 1_555 S4 ? F SF4 . ? A SF4 300 ? 1_555 117.0 ? 11 S1 ? F SF4 . ? A SF4 300 ? 1_555 FE2 ? F SF4 . ? A SF4 300 ? 1_555 S4 ? F SF4 . ? A SF4 300 ? 1_555 103.8 ? 12 S3 ? F SF4 . ? A SF4 300 ? 1_555 FE2 ? F SF4 . ? A SF4 300 ? 1_555 S4 ? F SF4 . ? A SF4 300 ? 1_555 106.3 ? 13 SG ? C CYS 199 ? A CYS 196 ? 1_555 FE3 ? F SF4 . ? A SF4 300 ? 1_555 S1 ? F SF4 . ? A SF4 300 ? 1_555 107.0 ? 14 SG ? C CYS 199 ? A CYS 196 ? 1_555 FE3 ? F SF4 . ? A SF4 300 ? 1_555 S2 ? F SF4 . ? A SF4 300 ? 1_555 115.0 ? 15 S1 ? F SF4 . ? A SF4 300 ? 1_555 FE3 ? F SF4 . ? A SF4 300 ? 1_555 S2 ? F SF4 . ? A SF4 300 ? 1_555 101.3 ? 16 SG ? C CYS 199 ? A CYS 196 ? 1_555 FE3 ? F SF4 . ? A SF4 300 ? 1_555 S4 ? F SF4 . ? A SF4 300 ? 1_555 114.9 ? 17 S1 ? F SF4 . ? A SF4 300 ? 1_555 FE3 ? F SF4 . ? A SF4 300 ? 1_555 S4 ? F SF4 . ? A SF4 300 ? 1_555 108.0 ? 18 S2 ? F SF4 . ? A SF4 300 ? 1_555 FE3 ? F SF4 . ? A SF4 300 ? 1_555 S4 ? F SF4 . ? A SF4 300 ? 1_555 109.4 ? 19 SG ? C CYS 208 ? A CYS 205 ? 1_555 FE4 ? F SF4 . ? A SF4 300 ? 1_555 S1 ? F SF4 . ? A SF4 300 ? 1_555 104.9 ? 20 SG ? C CYS 208 ? A CYS 205 ? 1_555 FE4 ? F SF4 . ? A SF4 300 ? 1_555 S2 ? F SF4 . ? A SF4 300 ? 1_555 114.1 ? 21 S1 ? F SF4 . ? A SF4 300 ? 1_555 FE4 ? F SF4 . ? A SF4 300 ? 1_555 S2 ? F SF4 . ? A SF4 300 ? 1_555 101.7 ? 22 SG ? C CYS 208 ? A CYS 205 ? 1_555 FE4 ? F SF4 . ? A SF4 300 ? 1_555 S3 ? F SF4 . ? A SF4 300 ? 1_555 119.5 ? 23 S1 ? F SF4 . ? A SF4 300 ? 1_555 FE4 ? F SF4 . ? A SF4 300 ? 1_555 S3 ? F SF4 . ? A SF4 300 ? 1_555 104.1 ? 24 S2 ? F SF4 . ? A SF4 300 ? 1_555 FE4 ? F SF4 . ? A SF4 300 ? 1_555 S3 ? F SF4 . ? A SF4 300 ? 1_555 110.2 ? 25 OP1 ? B DC 10 ? C DC 21 ? 1_555 NA ? E NA . ? A NA 224 ? 1_555 O ? C MET 116 ? A MET 113 ? 1_555 167.9 ? 26 OP1 ? B DC 10 ? C DC 21 ? 1_555 NA ? E NA . ? A NA 224 ? 1_555 O ? C LEU 118 ? A LEU 115 ? 1_555 91.9 ? 27 O ? C MET 116 ? A MET 113 ? 1_555 NA ? E NA . ? A NA 224 ? 1_555 O ? C LEU 118 ? A LEU 115 ? 1_555 99.1 ? 28 OP1 ? B DC 10 ? C DC 21 ? 1_555 NA ? E NA . ? A NA 224 ? 1_555 O ? C VAL 121 ? A VAL 118 ? 1_555 95.0 ? 29 O ? C MET 116 ? A MET 113 ? 1_555 NA ? E NA . ? A NA 224 ? 1_555 O ? C VAL 121 ? A VAL 118 ? 1_555 89.0 ? 30 O ? C LEU 118 ? A LEU 115 ? 1_555 NA ? E NA . ? A NA 224 ? 1_555 O ? C VAL 121 ? A VAL 118 ? 1_555 95.3 ? 31 OP1 ? B DC 10 ? C DC 21 ? 1_555 NA ? E NA . ? A NA 224 ? 1_555 O ? I HOH . ? A HOH 345 ? 1_555 90.0 ? 32 O ? C MET 116 ? A MET 113 ? 1_555 NA ? E NA . ? A NA 224 ? 1_555 O ? I HOH . ? A HOH 345 ? 1_555 85.8 ? 33 O ? C LEU 118 ? A LEU 115 ? 1_555 NA ? E NA . ? A NA 224 ? 1_555 O ? I HOH . ? A HOH 345 ? 1_555 86.2 ? 34 O ? C VAL 121 ? A VAL 118 ? 1_555 NA ? E NA . ? A NA 224 ? 1_555 O ? I HOH . ? A HOH 345 ? 1_555 174.8 ? 35 OP1 ? B DC 10 ? C DC 21 ? 1_555 NA ? E NA . ? A NA 224 ? 1_555 O ? H HOH . ? C HOH 210 ? 1_555 83.0 ? 36 O ? C MET 116 ? A MET 113 ? 1_555 NA ? E NA . ? A NA 224 ? 1_555 O ? H HOH . ? C HOH 210 ? 1_555 85.5 ? 37 O ? C LEU 118 ? A LEU 115 ? 1_555 NA ? E NA . ? A NA 224 ? 1_555 O ? H HOH . ? C HOH 210 ? 1_555 172.1 ? 38 O ? C VAL 121 ? A VAL 118 ? 1_555 NA ? E NA . ? A NA 224 ? 1_555 O ? H HOH . ? C HOH 210 ? 1_555 91.2 ? 39 O ? I HOH . ? A HOH 345 ? 1_555 NA ? E NA . ? A NA 224 ? 1_555 O ? H HOH . ? C HOH 210 ? 1_555 87.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-07-15 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.0 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 SOLVE phasing . ? 4 # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;Authors informed that the protein sequence has not yet been published. Residues Gly -2, Ser -1 and His 0 are cloning artifacts. ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 82 ? ? 45.12 29.44 2 1 ASP A 139 ? ? -110.92 -166.73 3 1 HIS A 188 ? ? -125.94 -66.80 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 C DG 13 ? P ? B DG 2 P 2 1 Y 1 C DG 13 ? OP1 ? B DG 2 OP1 3 1 Y 1 C DG 13 ? OP2 ? B DG 2 OP2 4 1 Y 1 A MET 1 ? CG ? C MET 4 CG 5 1 Y 1 A MET 1 ? SD ? C MET 4 SD 6 1 Y 1 A MET 1 ? CE ? C MET 4 CE 7 1 Y 1 A LYS 4 ? CG ? C LYS 7 CG 8 1 Y 1 A LYS 4 ? CD ? C LYS 7 CD 9 1 Y 1 A LYS 4 ? CE ? C LYS 7 CE 10 1 Y 1 A LYS 4 ? NZ ? C LYS 7 NZ 11 1 Y 1 A ARG 8 ? NE ? C ARG 11 NE 12 1 Y 1 A ARG 8 ? CZ ? C ARG 11 CZ 13 1 Y 1 A ARG 8 ? NH1 ? C ARG 11 NH1 14 1 Y 1 A ARG 8 ? NH2 ? C ARG 11 NH2 15 1 Y 1 A ASP 12 ? CG ? C ASP 15 CG 16 1 Y 1 A ASP 12 ? OD1 ? C ASP 15 OD1 17 1 Y 1 A ASP 12 ? OD2 ? C ASP 15 OD2 18 1 Y 1 A LYS 16 ? CE ? C LYS 19 CE 19 1 Y 1 A LYS 16 ? NZ ? C LYS 19 NZ 20 1 Y 1 A ASP 20 ? CB ? C ASP 23 CB 21 1 Y 1 A ASP 20 ? CG ? C ASP 23 CG 22 1 Y 1 A ASP 20 ? OD1 ? C ASP 23 OD1 23 1 Y 1 A ASP 20 ? OD2 ? C ASP 23 OD2 24 1 Y 1 A LYS 50 ? CD ? C LYS 53 CD 25 1 Y 1 A LYS 50 ? CE ? C LYS 53 CE 26 1 Y 1 A LYS 50 ? NZ ? C LYS 53 NZ 27 1 Y 1 A LYS 53 ? CD ? C LYS 56 CD 28 1 Y 1 A LYS 53 ? CE ? C LYS 56 CE 29 1 Y 1 A LYS 53 ? NZ ? C LYS 56 NZ 30 1 Y 1 A ARG 88 ? CG ? C ARG 91 CG 31 1 Y 1 A ARG 88 ? CD ? C ARG 91 CD 32 1 Y 1 A ARG 88 ? NE ? C ARG 91 NE 33 1 Y 1 A ARG 88 ? CZ ? C ARG 91 CZ 34 1 Y 1 A ARG 88 ? NH1 ? C ARG 91 NH1 35 1 Y 1 A ARG 88 ? NH2 ? C ARG 91 NH2 36 1 Y 1 A LYS 92 ? CD ? C LYS 95 CD 37 1 Y 1 A LYS 92 ? CE ? C LYS 95 CE 38 1 Y 1 A LYS 92 ? NZ ? C LYS 95 NZ 39 1 Y 1 A LYS 100 ? CD ? C LYS 103 CD 40 1 Y 1 A LYS 100 ? CE ? C LYS 103 CE 41 1 Y 1 A LYS 100 ? NZ ? C LYS 103 NZ 42 1 Y 1 A ARG 153 ? NE ? C ARG 156 NE 43 1 Y 1 A ARG 153 ? CZ ? C ARG 156 CZ 44 1 Y 1 A ARG 153 ? NH1 ? C ARG 156 NH1 45 1 Y 1 A ARG 153 ? NH2 ? C ARG 156 NH2 46 1 Y 1 A ASP 155 ? OD1 ? C ASP 158 OD1 47 1 Y 1 A ASP 155 ? OD2 ? C ASP 158 OD2 48 1 Y 1 A GLU 160 ? CG ? C GLU 163 CG 49 1 Y 1 A GLU 160 ? CD ? C GLU 163 CD 50 1 Y 1 A GLU 160 ? OE1 ? C GLU 163 OE1 51 1 Y 1 A GLU 160 ? OE2 ? C GLU 163 OE2 52 1 Y 1 A LYS 190 ? CE ? C LYS 193 CE 53 1 Y 1 A LYS 190 ? NZ ? C LYS 193 NZ 54 1 Y 1 A GLN 192 ? CD ? C GLN 195 CD 55 1 Y 1 A GLN 192 ? OE1 ? C GLN 195 OE1 56 1 Y 1 A GLN 192 ? NE2 ? C GLN 195 NE2 57 1 Y 1 A SER 193 ? CB ? C SER 196 CB 58 1 Y 1 A SER 193 ? OG ? C SER 196 OG 59 1 Y 1 A GLN 195 ? CG ? C GLN 198 CG 60 1 Y 1 A GLN 195 ? CD ? C GLN 198 CD 61 1 Y 1 A GLN 195 ? OE1 ? C GLN 198 OE1 62 1 Y 1 A GLN 195 ? NE2 ? C GLN 198 NE2 63 1 Y 1 A ARG 206 ? CG ? C ARG 209 CG 64 1 Y 1 A ARG 206 ? CD ? C ARG 209 CD 65 1 Y 1 A ARG 206 ? NE ? C ARG 209 NE 66 1 Y 1 A ARG 206 ? CZ ? C ARG 209 CZ 67 1 Y 1 A ARG 206 ? NH1 ? C ARG 209 NH1 68 1 Y 1 A ARG 206 ? NH2 ? C ARG 209 NH2 69 1 Y 1 A LYS 210 ? CE ? C LYS 213 CE 70 1 Y 1 A LYS 210 ? NZ ? C LYS 213 NZ 71 1 Y 1 A ARG 213 ? CG ? C ARG 216 CG 72 1 Y 1 A ARG 213 ? CD ? C ARG 216 CD 73 1 Y 1 A ARG 213 ? NE ? C ARG 216 NE 74 1 Y 1 A ARG 213 ? CZ ? C ARG 216 CZ 75 1 Y 1 A ARG 213 ? NH1 ? C ARG 216 NH1 76 1 Y 1 A ARG 213 ? NH2 ? C ARG 216 NH2 77 1 Y 1 A LYS 214 ? CB ? C LYS 217 CB 78 1 Y 1 A LYS 214 ? CG ? C LYS 217 CG 79 1 Y 1 A LYS 214 ? CD ? C LYS 217 CD 80 1 Y 1 A LYS 214 ? CE ? C LYS 217 CE 81 1 Y 1 A LYS 214 ? NZ ? C LYS 217 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 C DT 12 ? B DT 1 2 1 Y 1 A GLY -2 ? C GLY 1 3 1 Y 1 A SER -1 ? C SER 2 4 1 Y 1 A HIS 0 ? C HIS 3 5 1 Y 1 A ARG 215 ? C ARG 218 6 1 Y 1 A GLU 216 ? C GLU 219 7 1 Y 1 A GLU 217 ? C GLU 220 8 1 Y 1 A LYS 218 ? C LYS 221 9 1 Y 1 A ALA 219 ? C ALA 222 10 1 Y 1 A ALA 220 ? C ALA 223 11 1 Y 1 A ASN 221 ? C ASN 224 12 1 Y 1 A GLN 222 ? C GLN 225 13 1 Y 1 A LYS 223 ? C LYS 226 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1ORN 'b-form double helix' 1ORN 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DA 2 1_555 B DT 11 1_555 -0.364 0.096 -0.060 -13.619 -6.734 -7.020 1 B_DA2:DT22_C B 2 ? C 22 ? 20 1 1 A DG 3 1_555 B DC 10 1_555 -0.143 -0.062 -0.043 -4.134 -11.891 0.274 2 B_DG3:DC21_C B 3 ? C 21 ? 19 1 1 A DA 4 1_555 B DT 9 1_555 0.092 0.044 0.006 -0.307 -8.201 -2.766 3 B_DA4:DT20_C B 4 ? C 20 ? 20 1 1 A DC 5 1_555 B DG 8 1_555 0.228 -0.016 0.014 7.201 -3.817 -0.425 4 B_DC5:DG19_C B 5 ? C 19 ? 19 1 1 A DT 7 1_555 B DA 6 1_555 -0.216 0.017 0.209 -9.668 -15.252 -3.674 5 B_DT7:DA17_C B 7 ? C 17 ? 20 1 1 A DG 8 1_555 B DC 5 1_555 -0.158 0.232 0.203 -2.583 -4.337 2.743 6 B_DG8:DC16_C B 8 ? C 16 ? 19 1 1 A DG 9 1_555 B DC 4 1_555 -0.390 0.045 -0.147 -5.203 -11.073 0.745 7 B_DG9:DC15_C B 9 ? C 15 ? 19 1 1 A DA 10 1_555 B DT 3 1_555 0.278 0.044 -0.102 -7.936 -6.467 -4.602 8 B_DA10:DT14_C B 10 ? C 14 ? 20 1 1 A DC 11 1_555 B DG 2 1_555 0.364 -0.096 -0.281 0.559 14.082 3.142 9 B_DC11:DG13_C B 11 ? C 13 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DA 2 1_555 B DT 11 1_555 A DG 3 1_555 B DC 10 1_555 0.315 -0.021 3.194 -0.348 2.455 34.650 -0.401 -0.579 3.182 4.115 0.583 34.736 1 BB_DA2DG3:DC21DT22_CC B 2 ? C 22 ? B 3 ? C 21 ? 1 A DG 3 1_555 B DC 10 1_555 A DA 4 1_555 B DT 9 1_555 -0.627 0.006 3.189 -2.709 0.388 35.908 -0.044 0.636 3.226 0.629 4.387 36.008 2 BB_DG3DA4:DT20DC21_CC B 3 ? C 21 ? B 4 ? C 20 ? 1 A DA 4 1_555 B DT 9 1_555 A DC 5 1_555 B DG 8 1_555 0.503 -0.448 3.121 0.884 2.659 28.295 -1.492 -0.831 3.081 5.423 -1.803 28.430 3 BB_DA4DC5:DG19DT20_CC B 4 ? C 20 ? B 5 ? C 19 ? 1 A DT 7 1_555 B DA 6 1_555 A DG 8 1_555 B DC 5 1_555 0.596 -0.201 3.160 -2.416 5.326 34.647 -1.094 -1.333 3.049 8.865 4.021 35.122 4 BB_DT7DG8:DC16DA17_CC B 7 ? C 17 ? B 8 ? C 16 ? 1 A DG 8 1_555 B DC 5 1_555 A DG 9 1_555 B DC 4 1_555 -0.190 -0.321 3.423 0.819 4.864 32.424 -1.438 0.482 3.335 8.647 -1.457 32.788 5 BB_DG8DG9:DC15DC16_CC B 8 ? C 16 ? B 9 ? C 15 ? 1 A DG 9 1_555 B DC 4 1_555 A DA 10 1_555 B DT 3 1_555 -0.494 -0.308 3.367 -2.912 3.635 38.383 -0.926 0.377 3.352 5.503 4.409 38.654 6 BB_DG9DA10:DT14DC15_CC B 9 ? C 15 ? B 10 ? C 14 ? 1 A DA 10 1_555 B DT 3 1_555 A DC 11 1_555 B DG 2 1_555 1.261 -0.465 3.308 -0.453 -0.141 32.726 -0.800 -2.316 3.292 -0.250 0.803 32.730 7 BB_DA10DC11:DG13DT14_CC B 10 ? C 14 ? B 11 ? C 13 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL TRS 5 'SODIUM ION' NA 6 'IRON/SULFUR CLUSTER' SF4 7 water HOH #