HEADER METAL BINDING PROTEIN 21-MAR-03 1OT4 TITLE SOLUTION STRUCTURE OF CU(II)-COPC FROM PSEUDOMONAS SYRINGAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: COPPER RESISTANCE PROTEIN C; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS SYRINGAE; SOURCE 3 ORGANISM_TAXID: 317; SOURCE 4 GENE: COPC; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET20B KEYWDS COPPER TRAFFICKING, PARAMAGNETIC PROTEINS, TYPE II COPPER(II), KEYWDS 2 STRUCTURAL PROTEOMICS IN EUROPE, SPINE, STRUCTURAL GENOMICS, METAL KEYWDS 3 BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 35 AUTHOR F.ARNESANO,L.BANCI,I.BERTINI,I.C.FELLI,C.LUCHINAT,A.R.THOMPSETT, AUTHOR 2 STRUCTURAL PROTEOMICS IN EUROPE (SPINE) REVDAT 3 23-FEB-22 1OT4 1 REMARK REVDAT 2 24-FEB-09 1OT4 1 VERSN REVDAT 1 08-JUL-03 1OT4 0 JRNL AUTH F.ARNESANO,L.BANCI,I.BERTINI,I.C.FELLI,C.LUCHINAT, JRNL AUTH 2 A.R.THOMPSETT JRNL TITL A STRATEGY FOR THE NMR CHARACTERIZATION OF TYPE II JRNL TITL 2 COPPER(II) PROTEINS: THE CASE OF THE COPPER TRAFFICKING JRNL TITL 3 PROTEIN COPC FROM PSEUDOMONAS SYRINGAE. JRNL REF J.AM.CHEM.SOC. V. 125 7200 2003 JRNL REFN ISSN 0002-7863 JRNL PMID 12797793 JRNL DOI 10.1021/JA034112C REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR, DYANA REMARK 3 AUTHORS : GUENTERT, MUMENTHALER, WUETHRICH (DYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1276 MEANINGFUL NOES, 123 DIHEDRAL REMARK 3 ANGLE RESTRAINTS, 27 EXPERIMENTAL HYDROGEN BONDS, 23 METAL- REMARK 3 HETERONUCLEUS DISTANCES OBTAINED FROM LONGITUDINAL 13C REMARK 3 RELAXATION RATES, 83 PROTON PSEUDOCONTACT SHIFTS REMARK 4 REMARK 4 1OT4 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-MAR-03. REMARK 100 THE DEPOSITION ID IS D_1000018642. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 100MM PHOSPHATE REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 2.5 MM CU(II)-COPC 15N,13C; REMARK 210 100MM PHOSPHATE BUFFER NA; 90% REMARK 210 H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY; 3D_15N- REMARK 210 SEPARATED_NOESY; 13C-13C REMARK 210 CONSTANT TIME-COSY; 13C -15N REMARK 210 HSQC; SATURATION RECOVERY 1D 13C REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XEASY, DYANA, CORMA REMARK 210 METHOD USED : SIMULATED ANNEALING TORSION REMARK 210 ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 400 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 35 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: CU(II)-COPC WAS OBTAINED BY ADDING ONE EQUIVALENT OF CUSO4 REMARK 210 TO APOCOPC REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H TRP A 83 O GLY A 95 1.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 VAL A 5 -77.91 -55.49 REMARK 500 1 PRO A 9 -73.32 -74.99 REMARK 500 1 ALA A 10 46.83 -177.27 REMARK 500 1 GLU A 11 101.06 -44.35 REMARK 500 1 GLU A 27 61.82 -153.81 REMARK 500 1 ASN A 28 -85.31 -62.24 REMARK 500 1 LEU A 29 81.70 38.79 REMARK 500 1 VAL A 30 -98.69 -64.55 REMARK 500 1 GLN A 32 -81.04 -156.94 REMARK 500 1 PHE A 33 26.24 -161.81 REMARK 500 1 THR A 41 63.08 -111.05 REMARK 500 1 ALA A 42 179.27 -51.17 REMARK 500 1 MET A 43 156.81 -37.83 REMARK 500 1 MET A 46 66.33 -103.99 REMARK 500 1 HIS A 48 87.93 47.50 REMARK 500 1 SER A 87 -70.12 -89.16 REMARK 500 1 SER A 88 87.72 170.18 REMARK 500 1 ASP A 89 44.58 174.85 REMARK 500 1 THR A 90 -173.50 49.32 REMARK 500 1 HIS A 91 88.77 42.15 REMARK 500 2 LEU A 4 175.21 -54.26 REMARK 500 2 VAL A 5 -77.41 -53.39 REMARK 500 2 ALA A 10 44.44 -179.19 REMARK 500 2 GLU A 11 103.53 -42.15 REMARK 500 2 SER A 13 98.41 -69.31 REMARK 500 2 ASN A 28 136.35 62.09 REMARK 500 2 LEU A 29 -65.58 -98.46 REMARK 500 2 VAL A 30 124.37 62.43 REMARK 500 2 PHE A 33 19.00 -146.04 REMARK 500 2 THR A 41 60.01 -106.68 REMARK 500 2 GLU A 47 73.84 55.67 REMARK 500 2 HIS A 48 85.06 44.35 REMARK 500 2 ALA A 76 150.86 -49.24 REMARK 500 2 THR A 90 74.49 -175.22 REMARK 500 2 HIS A 91 113.50 61.26 REMARK 500 3 LEU A 4 174.53 -54.32 REMARK 500 3 VAL A 5 -77.16 -55.86 REMARK 500 3 THR A 8 58.37 -140.23 REMARK 500 3 ALA A 10 45.46 163.45 REMARK 500 3 ASN A 28 144.24 61.40 REMARK 500 3 THR A 31 58.55 -104.41 REMARK 500 3 PHE A 33 14.92 -142.58 REMARK 500 3 THR A 41 59.92 -109.89 REMARK 500 3 MET A 43 98.07 49.03 REMARK 500 3 GLU A 47 53.91 39.06 REMARK 500 3 HIS A 48 88.93 41.02 REMARK 500 3 ALA A 76 163.65 -44.27 REMARK 500 3 SER A 88 -64.31 72.83 REMARK 500 3 THR A 90 -172.34 47.10 REMARK 500 4 VAL A 5 -83.58 -62.00 REMARK 500 REMARK 500 THIS ENTRY HAS 593 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1M42 RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF APOCOPC FROM PSEUDOMONAS SYRINGAE REMARK 900 RELATED ID: 1NM4 RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF CU(I)-COPC FROM PSEUDOMONAS SYRINGAE REMARK 900 RELATED ID: CIRMMP01 RELATED DB: TARGETDB DBREF 1OT4 A 1 102 UNP P12376 COPC_PSESM 25 126 SEQRES 1 A 102 HIS PRO LYS LEU VAL SER SER THR PRO ALA GLU GLY SER SEQRES 2 A 102 GLU GLY ALA ALA PRO ALA LYS ILE GLU LEU HIS PHE SER SEQRES 3 A 102 GLU ASN LEU VAL THR GLN PHE SER GLY ALA LYS LEU VAL SEQRES 4 A 102 MET THR ALA MET PRO GLY MET GLU HIS SER PRO MET ALA SEQRES 5 A 102 VAL LYS ALA ALA VAL SER GLY GLY GLY ASP PRO LYS THR SEQRES 6 A 102 MET VAL ILE THR PRO ALA SER PRO LEU THR ALA GLY THR SEQRES 7 A 102 TYR LYS VAL ASP TRP ARG ALA VAL SER SER ASP THR HIS SEQRES 8 A 102 PRO ILE THR GLY SER VAL THR PHE LYS VAL LYS HET CU A 103 1 HETNAM CU COPPER (II) ION FORMUL 2 CU CU 2+ SHEET 1 A 4 SER A 6 THR A 8 0 SHEET 2 A 4 ILE A 21 HIS A 24 -1 O HIS A 24 N SER A 6 SHEET 3 A 4 THR A 65 PRO A 70 -1 O ILE A 68 N ILE A 21 SHEET 4 A 4 ALA A 55 GLY A 59 -1 N ALA A 56 O THR A 69 SHEET 1 B 3 GLY A 35 VAL A 39 0 SHEET 2 B 3 GLY A 77 ALA A 85 -1 O ARG A 84 N GLY A 35 SHEET 3 B 3 ILE A 93 VAL A 101 -1 O GLY A 95 N TRP A 83 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1