data_1OWD # _entry.id 1OWD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.286 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1OWD RCSB RCSB018734 WWPDB D_1000018734 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1FV9 . unspecified PDB 1OWE . unspecified PDB 1OWH . unspecified PDB 1OWI . unspecified PDB 1OWJ . unspecified PDB 1OWK . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1OWD _pdbx_database_status.recvd_initial_deposition_date 2003-03-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wendt, M.D.' 1 'Rockway, T.W.' 2 'Geyer, A.' 3 'McClellan, W.' 4 'Weitzberg, M.' 5 'Zhao, X.' 6 'Mantei, R.' 7 'Nienaber, V.L.' 8 'Stewart, K.' 9 'Klinghofer, V.' 10 'Giranda, V.L.' 11 # _citation.id primary _citation.title ;Identification of Novel Binding Interactions in the Development of Potent, Selective 2-Naphthamidine Inhibitors of Urokinase. Synthesis, Structural Analysis, and SAR of N-Phenyl Amide 6-Substitution. ; _citation.journal_abbrev J.Med.Chem. _citation.journal_volume 47 _citation.page_first 303 _citation.page_last 324 _citation.year 2004 _citation.journal_id_ASTM JMCMAR _citation.country US _citation.journal_id_ISSN 0022-2623 _citation.journal_id_CSD 0151 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 14711304 _citation.pdbx_database_id_DOI 10.1021/jm0300072 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Wendt, M.D.' 1 primary 'Rockway, T.W.' 2 primary 'Geyer, A.' 3 primary 'McClellan, W.' 4 primary 'Weitzberg, M.' 5 primary 'Zhao, X.' 6 primary 'Mantei, R.' 7 primary 'Nienaber, V.L.' 8 primary 'Stewart, K.' 9 primary 'Klinghofer, V.' 10 primary 'Giranda, V.L.' 11 # _cell.entry_id 1OWD _cell.length_a 55.160 _cell.length_b 53.000 _cell.length_c 82.300 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1OWD _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Urokinase-type plasminogen activator' 27622.496 1 3.4.21.73 ? 'residues 179-423' ? 2 non-polymer syn '6-[AMINO(IMINO)METHYL]-N-[(4R)-4-ETHYL-1,2,3,4-TETRAHYDROISOQUINOLIN-6-YL]-2-NAPHTHAMIDE' 372.463 1 ? ? ? ? 3 water nat water 18.015 28 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'uPA, U-plasminogen activator' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVEN LILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVK LISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPW IRSHT ; _entity_poly.pdbx_seq_one_letter_code_can ;IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVEN LILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVK LISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPW IRSHT ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ILE n 1 2 ILE n 1 3 GLY n 1 4 GLY n 1 5 GLU n 1 6 PHE n 1 7 THR n 1 8 THR n 1 9 ILE n 1 10 GLU n 1 11 ASN n 1 12 GLN n 1 13 PRO n 1 14 TRP n 1 15 PHE n 1 16 ALA n 1 17 ALA n 1 18 ILE n 1 19 TYR n 1 20 ARG n 1 21 ARG n 1 22 HIS n 1 23 ARG n 1 24 GLY n 1 25 GLY n 1 26 SER n 1 27 VAL n 1 28 THR n 1 29 TYR n 1 30 VAL n 1 31 CYS n 1 32 GLY n 1 33 GLY n 1 34 SER n 1 35 LEU n 1 36 MET n 1 37 SER n 1 38 PRO n 1 39 CYS n 1 40 TRP n 1 41 VAL n 1 42 ILE n 1 43 SER n 1 44 ALA n 1 45 THR n 1 46 HIS n 1 47 CYS n 1 48 PHE n 1 49 ILE n 1 50 ASP n 1 51 TYR n 1 52 PRO n 1 53 LYS n 1 54 LYS n 1 55 GLU n 1 56 ASP n 1 57 TYR n 1 58 ILE n 1 59 VAL n 1 60 TYR n 1 61 LEU n 1 62 GLY n 1 63 ARG n 1 64 SER n 1 65 ARG n 1 66 LEU n 1 67 ASN n 1 68 SER n 1 69 ASN n 1 70 THR n 1 71 GLN n 1 72 GLY n 1 73 GLU n 1 74 MET n 1 75 LYS n 1 76 PHE n 1 77 GLU n 1 78 VAL n 1 79 GLU n 1 80 ASN n 1 81 LEU n 1 82 ILE n 1 83 LEU n 1 84 HIS n 1 85 LYS n 1 86 ASP n 1 87 TYR n 1 88 SER n 1 89 ALA n 1 90 ASP n 1 91 THR n 1 92 LEU n 1 93 ALA n 1 94 HIS n 1 95 HIS n 1 96 ASN n 1 97 ASP n 1 98 ILE n 1 99 ALA n 1 100 LEU n 1 101 LEU n 1 102 LYS n 1 103 ILE n 1 104 ARG n 1 105 SER n 1 106 LYS n 1 107 GLU n 1 108 GLY n 1 109 ARG n 1 110 CYS n 1 111 ALA n 1 112 GLN n 1 113 PRO n 1 114 SER n 1 115 ARG n 1 116 THR n 1 117 ILE n 1 118 GLN n 1 119 THR n 1 120 ILE n 1 121 CYS n 1 122 LEU n 1 123 PRO n 1 124 SER n 1 125 MET n 1 126 TYR n 1 127 ASN n 1 128 ASP n 1 129 PRO n 1 130 GLN n 1 131 PHE n 1 132 GLY n 1 133 THR n 1 134 SER n 1 135 CYS n 1 136 GLU n 1 137 ILE n 1 138 THR n 1 139 GLY n 1 140 PHE n 1 141 GLY n 1 142 LYS n 1 143 GLU n 1 144 ASN n 1 145 SER n 1 146 THR n 1 147 ASP n 1 148 TYR n 1 149 LEU n 1 150 TYR n 1 151 PRO n 1 152 GLU n 1 153 GLN n 1 154 LEU n 1 155 LYS n 1 156 MET n 1 157 THR n 1 158 VAL n 1 159 VAL n 1 160 LYS n 1 161 LEU n 1 162 ILE n 1 163 SER n 1 164 HIS n 1 165 ARG n 1 166 GLU n 1 167 CYS n 1 168 GLN n 1 169 GLN n 1 170 PRO n 1 171 HIS n 1 172 TYR n 1 173 TYR n 1 174 GLY n 1 175 SER n 1 176 GLU n 1 177 VAL n 1 178 THR n 1 179 THR n 1 180 LYS n 1 181 MET n 1 182 LEU n 1 183 CYS n 1 184 ALA n 1 185 ALA n 1 186 ASP n 1 187 PRO n 1 188 GLN n 1 189 TRP n 1 190 LYS n 1 191 THR n 1 192 ASP n 1 193 SER n 1 194 CYS n 1 195 GLN n 1 196 GLY n 1 197 ASP n 1 198 SER n 1 199 GLY n 1 200 GLY n 1 201 PRO n 1 202 LEU n 1 203 VAL n 1 204 CYS n 1 205 SER n 1 206 LEU n 1 207 GLN n 1 208 GLY n 1 209 ARG n 1 210 MET n 1 211 THR n 1 212 LEU n 1 213 THR n 1 214 GLY n 1 215 ILE n 1 216 VAL n 1 217 SER n 1 218 TRP n 1 219 GLY n 1 220 ARG n 1 221 GLY n 1 222 CYS n 1 223 ALA n 1 224 LEU n 1 225 LYS n 1 226 ASP n 1 227 LYS n 1 228 PRO n 1 229 GLY n 1 230 VAL n 1 231 TYR n 1 232 THR n 1 233 ARG n 1 234 VAL n 1 235 SER n 1 236 HIS n 1 237 PHE n 1 238 LEU n 1 239 PRO n 1 240 TRP n 1 241 ILE n 1 242 ARG n 1 243 SER n 1 244 HIS n 1 245 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene PLAU _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name 'fall armyworm' _entity_src_gen.pdbx_host_org_scientific_name 'Spodoptera frugiperda' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus Spodoptera _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Baculovirus _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code UROK_HUMAN _struct_ref.pdbx_db_accession P00749 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVEN LILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVK LISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPW IRSHT ; _struct_ref.pdbx_align_begin 179 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1OWD _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 245 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00749 _struct_ref_seq.db_align_beg 179 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 423 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 244 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 497 non-polymer . '6-[AMINO(IMINO)METHYL]-N-[(4R)-4-ETHYL-1,2,3,4-TETRAHYDROISOQUINOLIN-6-YL]-2-NAPHTHAMIDE' '6-[N-(4-ETHYL-1,2,3,4-TETRAHYDRO-6-ISOQUINOLINYL)CARBAMYL]-2-NAPHTHALENECARBOXAMIDINE' 'C23 H24 N4 O' 372.463 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1OWD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.16 _exptl_crystal.density_percent_sol 42.61 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp 160 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1998-10-19 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54 # _reflns.entry_id 1OWD _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 22.29 _reflns.d_resolution_high 2.32 _reflns.number_obs 9926 _reflns.number_all 9926 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 7.9 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 1OWD _refine.ls_number_reflns_obs 7709 _refine.ls_number_reflns_all 7709 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF 10000000.00 _refine.pdbx_data_cutoff_low_absF 0.001000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.00 _refine.ls_d_res_high 2.32 _refine.ls_percent_reflns_obs 69.9 _refine.ls_R_factor_obs 0.269 _refine.ls_R_factor_all 0.269 _refine.ls_R_factor_R_work 0.269 _refine.ls_R_factor_R_free 0.313 _refine.ls_R_factor_R_free_error 0.011 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.4 _refine.ls_number_reflns_R_free 798 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 15.4 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1OWD _refine_analyze.Luzzati_coordinate_error_obs 0.28 _refine_analyze.Luzzati_sigma_a_obs 0.15 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.33 _refine_analyze.Luzzati_sigma_a_free 0.16 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1933 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 28 _refine_hist.number_atoms_solvent 28 _refine_hist.number_atoms_total 1989 _refine_hist.d_res_high 2.32 _refine_hist.d_res_low 10.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.012 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.9 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 25.0 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 0.79 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it 1.19 1.50 ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it 1.77 2.00 ? ? 'X-RAY DIFFRACTION' ? x_scbond_it 2.50 2.00 ? ? 'X-RAY DIFFRACTION' ? x_scangle_it 3.78 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.30 _refine_ls_shell.d_res_low 2.44 _refine_ls_shell.number_reflns_R_work 769 _refine_ls_shell.R_factor_R_work 0.24 _refine_ls_shell.percent_reflns_obs 48.8 _refine_ls_shell.R_factor_R_free 0.285 _refine_ls_shell.R_factor_R_free_error 0.028 _refine_ls_shell.percent_reflns_R_free 11.9 _refine_ls_shell.number_reflns_R_free 104 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 SEARCHWATERSTEST.XPRM TOPHCSDX.PRO 'X-RAY DIFFRACTION' 2 PARVICKI.PRO ? 'X-RAY DIFFRACTION' 3 PARAM19X.PRO ? 'X-RAY DIFFRACTION' 4 PARHCSDX.PRO ? 'X-RAY DIFFRACTION' 5 MOSHE2.XPRM ? 'X-RAY DIFFRACTION' # _struct.entry_id 1OWD _struct.title 'Substituted 2-Naphthamidine inhibitors of urokinase' _struct.pdbx_descriptor 'Urokinase-type plasminogen activator (E.C.3.4.21.73)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1OWD _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'Plasminogen activation, Hydrolase, Serine protease, Glycoprotein, Kringle, EGF-like domain' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 8 ? GLN A 12 ? THR A 8 GLN A 12 5 ? 5 HELX_P HELX_P2 2 ALA A 44 ? PHE A 48 ? ALA A 43 PHE A 47 5 ? 5 HELX_P HELX_P3 3 LYS A 53 ? GLU A 55 ? LYS A 52 GLU A 54 5 ? 3 HELX_P HELX_P4 4 SER A 163 ? GLN A 168 ? SER A 162 GLN A 167 1 ? 6 HELX_P HELX_P5 5 TYR A 173 ? VAL A 177 ? TYR A 172 VAL A 176 5 ? 5 HELX_P HELX_P6 6 PHE A 237 ? THR A 245 ? PHE A 236 THR A 244 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 31 SG ? ? ? 1_555 A CYS 47 SG ? ? A CYS 30 A CYS 46 1_555 ? ? ? ? ? ? ? 2.043 ? disulf2 disulf ? ? A CYS 39 SG ? ? ? 1_555 A CYS 110 SG ? ? A CYS 38 A CYS 109 1_555 ? ? ? ? ? ? ? 2.033 ? disulf3 disulf ? ? A CYS 135 SG ? ? ? 1_555 A CYS 204 SG ? ? A CYS 134 A CYS 203 1_555 ? ? ? ? ? ? ? 2.035 ? disulf4 disulf ? ? A CYS 167 SG ? ? ? 1_555 A CYS 183 SG ? ? A CYS 166 A CYS 182 1_555 ? ? ? ? ? ? ? 2.027 ? disulf5 disulf ? ? A CYS 194 SG ? ? ? 1_555 A CYS 222 SG ? ? A CYS 193 A CYS 221 1_555 ? ? ? ? ? ? ? 2.033 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 7 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 5 ? PHE A 6 ? GLU A 5 PHE A 6 A 2 LYS A 155 ? ILE A 162 ? LYS A 154 ILE A 161 A 3 SER A 134 ? GLY A 139 ? SER A 133 GLY A 138 A 4 PRO A 201 ? LEU A 206 ? PRO A 200 LEU A 205 A 5 ARG A 209 ? TRP A 218 ? ARG A 208 TRP A 217 A 6 GLY A 229 ? ARG A 233 ? GLY A 228 ARG A 232 A 7 MET A 181 ? ALA A 185 ? MET A 180 ALA A 184 A 8 LYS A 155 ? ILE A 162 ? LYS A 154 ILE A 161 B 1 PHE A 15 ? ARG A 21 ? PHE A 15 ARG A 21 B 2 VAL A 27 ? SER A 37 ? VAL A 26 SER A 36 B 3 TRP A 40 ? SER A 43 ? TRP A 39 SER A 42 B 4 ALA A 99 ? ARG A 104 ? ALA A 98 ARG A 103 B 5 MET A 74 ? LEU A 83 ? MET A 73 LEU A 82 B 6 TYR A 57 ? LEU A 61 ? TYR A 56 LEU A 60 B 7 PHE A 15 ? ARG A 21 ? PHE A 15 ARG A 21 C 1 SER A 88 ? ALA A 89 ? SER A 87 ALA A 88 C 2 HIS A 94 ? HIS A 95 ? HIS A 93 HIS A 94 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 5 ? N GLU A 5 O MET A 156 ? O MET A 155 A 2 3 O VAL A 159 ? O VAL A 158 N CYS A 135 ? N CYS A 134 A 3 4 N THR A 138 ? N THR A 137 O PRO A 201 ? O PRO A 200 A 4 5 N LEU A 206 ? N LEU A 205 O ARG A 209 ? O ARG A 208 A 5 6 O TRP A 218 ? O TRP A 217 N VAL A 230 ? N VAL A 229 A 6 7 N TYR A 231 ? N TYR A 230 O LEU A 182 ? O LEU A 181 A 7 8 O ALA A 185 ? O ALA A 184 N LYS A 160 ? N LYS A 159 B 1 2 O ARG A 20 ? O ARG A 20 N THR A 28 ? N THR A 27 B 2 3 N MET A 36 ? N MET A 35 O TRP A 40 ? O TRP A 39 B 3 4 O SER A 43 ? O SER A 42 N ALA A 99 ? N ALA A 98 B 4 5 O ARG A 104 ? O ARG A 103 N GLU A 77 ? N GLU A 76 B 5 6 N VAL A 78 ? N VAL A 77 O TYR A 57 ? O TYR A 56 B 6 7 N TYR A 60 ? N TYR A 59 O ALA A 17 ? O ALA A 17 C 1 2 O SER A 88 ? O SER A 87 N HIS A 95 ? N HIS A 94 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 10 _struct_site.details 'BINDING SITE FOR RESIDUE 497 A 1001' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 10 GLU A 5 ? GLU A 5 . ? 4_556 ? 2 AC1 10 HIS A 46 ? HIS A 45 . ? 1_555 ? 3 AC1 10 ASP A 50 ? ASP A 49 . ? 1_555 ? 4 AC1 10 ASP A 192 ? ASP A 191 . ? 1_555 ? 5 AC1 10 SER A 193 ? SER A 192 . ? 1_555 ? 6 AC1 10 GLN A 195 ? GLN A 194 . ? 1_555 ? 7 AC1 10 SER A 198 ? SER A 197 . ? 1_555 ? 8 AC1 10 TRP A 218 ? TRP A 217 . ? 1_555 ? 9 AC1 10 GLY A 221 ? GLY A 220 . ? 1_555 ? 10 AC1 10 GLY A 229 ? GLY A 228 . ? 1_555 ? # _database_PDB_matrix.entry_id 1OWD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1OWD _atom_sites.fract_transf_matrix[1][1] 0.018129 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018868 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012151 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ILE 1 1 1 ILE ILE A . n A 1 2 ILE 2 2 2 ILE ILE A . n A 1 3 GLY 3 3 3 GLY GLY A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 PHE 6 6 6 PHE PHE A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 THR 8 8 8 THR THR A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 ASN 11 11 11 ASN ASN A . n A 1 12 GLN 12 12 12 GLN GLN A . n A 1 13 PRO 13 13 13 PRO PRO A . n A 1 14 TRP 14 14 14 TRP TRP A . n A 1 15 PHE 15 15 15 PHE PHE A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 ILE 18 18 18 ILE ILE A . n A 1 19 TYR 19 19 19 TYR TYR A . n A 1 20 ARG 20 20 20 ARG ARG A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 HIS 22 22 22 HIS HIS A . n A 1 23 ARG 23 23 23 ARG ARG A . n A 1 24 GLY 24 23 23 GLY GLY A A n A 1 25 GLY 25 24 24 GLY GLY A . n A 1 26 SER 26 25 25 SER SER A . n A 1 27 VAL 27 26 26 VAL VAL A . n A 1 28 THR 28 27 27 THR THR A . n A 1 29 TYR 29 28 28 TYR TYR A . n A 1 30 VAL 30 29 29 VAL VAL A . n A 1 31 CYS 31 30 30 CYS CYS A . n A 1 32 GLY 32 31 31 GLY GLY A . n A 1 33 GLY 33 32 32 GLY GLY A . n A 1 34 SER 34 33 33 SER SER A . n A 1 35 LEU 35 34 34 LEU LEU A . n A 1 36 MET 36 35 35 MET MET A . n A 1 37 SER 37 36 36 SER SER A . n A 1 38 PRO 38 37 37 PRO PRO A . n A 1 39 CYS 39 38 38 CYS CYS A . n A 1 40 TRP 40 39 39 TRP TRP A . n A 1 41 VAL 41 40 40 VAL VAL A . n A 1 42 ILE 42 41 41 ILE ILE A . n A 1 43 SER 43 42 42 SER SER A . n A 1 44 ALA 44 43 43 ALA ALA A . n A 1 45 THR 45 44 44 THR THR A . n A 1 46 HIS 46 45 45 HIS HIS A . n A 1 47 CYS 47 46 46 CYS CYS A . n A 1 48 PHE 48 47 47 PHE PHE A . n A 1 49 ILE 49 48 48 ILE ILE A . n A 1 50 ASP 50 49 49 ASP ASP A . n A 1 51 TYR 51 50 50 TYR TYR A . n A 1 52 PRO 52 51 51 PRO PRO A . n A 1 53 LYS 53 52 52 LYS LYS A . n A 1 54 LYS 54 53 53 LYS LYS A . n A 1 55 GLU 55 54 54 GLU GLU A . n A 1 56 ASP 56 55 55 ASP ASP A . n A 1 57 TYR 57 56 56 TYR TYR A . n A 1 58 ILE 58 57 57 ILE ILE A . n A 1 59 VAL 59 58 58 VAL VAL A . n A 1 60 TYR 60 59 59 TYR TYR A . n A 1 61 LEU 61 60 60 LEU LEU A . n A 1 62 GLY 62 61 61 GLY GLY A . n A 1 63 ARG 63 62 62 ARG ARG A . n A 1 64 SER 64 63 63 SER SER A . n A 1 65 ARG 65 64 64 ARG ARG A . n A 1 66 LEU 66 65 65 LEU LEU A . n A 1 67 ASN 67 66 66 ASN ASN A . n A 1 68 SER 68 67 67 SER SER A . n A 1 69 ASN 69 68 68 ASN ASN A . n A 1 70 THR 70 69 69 THR THR A . n A 1 71 GLN 71 70 70 GLN GLN A . n A 1 72 GLY 72 71 71 GLY GLY A . n A 1 73 GLU 73 72 72 GLU GLU A . n A 1 74 MET 74 73 73 MET MET A . n A 1 75 LYS 75 74 74 LYS LYS A . n A 1 76 PHE 76 75 75 PHE PHE A . n A 1 77 GLU 77 76 76 GLU GLU A . n A 1 78 VAL 78 77 77 VAL VAL A . n A 1 79 GLU 79 78 78 GLU GLU A . n A 1 80 ASN 80 79 79 ASN ASN A . n A 1 81 LEU 81 80 80 LEU LEU A . n A 1 82 ILE 82 81 81 ILE ILE A . n A 1 83 LEU 83 82 82 LEU LEU A . n A 1 84 HIS 84 83 83 HIS HIS A . n A 1 85 LYS 85 84 84 LYS LYS A . n A 1 86 ASP 86 85 85 ASP ASP A . n A 1 87 TYR 87 86 86 TYR TYR A . n A 1 88 SER 88 87 87 SER SER A . n A 1 89 ALA 89 88 88 ALA ALA A . n A 1 90 ASP 90 89 89 ASP ASP A . n A 1 91 THR 91 90 90 THR THR A . n A 1 92 LEU 92 91 91 LEU LEU A . n A 1 93 ALA 93 92 92 ALA ALA A . n A 1 94 HIS 94 93 93 HIS HIS A . n A 1 95 HIS 95 94 94 HIS HIS A . n A 1 96 ASN 96 95 95 ASN ASN A . n A 1 97 ASP 97 96 96 ASP ASP A . n A 1 98 ILE 98 97 97 ILE ILE A . n A 1 99 ALA 99 98 98 ALA ALA A . n A 1 100 LEU 100 99 99 LEU LEU A . n A 1 101 LEU 101 100 100 LEU LEU A . n A 1 102 LYS 102 101 101 LYS LYS A . n A 1 103 ILE 103 102 102 ILE ILE A . n A 1 104 ARG 104 103 103 ARG ARG A . n A 1 105 SER 105 104 104 SER SER A . n A 1 106 LYS 106 105 105 LYS LYS A . n A 1 107 GLU 107 106 106 GLU GLU A . n A 1 108 GLY 108 107 107 GLY GLY A . n A 1 109 ARG 109 108 108 ARG ARG A . n A 1 110 CYS 110 109 109 CYS CYS A . n A 1 111 ALA 111 110 110 ALA ALA A . n A 1 112 GLN 112 111 111 GLN GLN A . n A 1 113 PRO 113 112 112 PRO PRO A . n A 1 114 SER 114 113 113 SER SER A . n A 1 115 ARG 115 114 114 ARG ARG A . n A 1 116 THR 116 115 115 THR THR A . n A 1 117 ILE 117 116 116 ILE ILE A . n A 1 118 GLN 118 117 117 GLN GLN A . n A 1 119 THR 119 118 118 THR THR A . n A 1 120 ILE 120 119 119 ILE ILE A . n A 1 121 CYS 121 120 120 CYS ALA A . n A 1 122 LEU 122 121 121 LEU LEU A . n A 1 123 PRO 123 122 122 PRO PRO A . n A 1 124 SER 124 123 123 SER SER A . n A 1 125 MET 125 124 124 MET MET A . n A 1 126 TYR 126 125 125 TYR TYR A . n A 1 127 ASN 127 126 126 ASN ASN A . n A 1 128 ASP 128 127 127 ASP ASP A . n A 1 129 PRO 129 128 128 PRO PRO A . n A 1 130 GLN 130 129 129 GLN GLN A . n A 1 131 PHE 131 130 130 PHE PHE A . n A 1 132 GLY 132 131 131 GLY GLY A . n A 1 133 THR 133 132 132 THR THR A . n A 1 134 SER 134 133 133 SER SER A . n A 1 135 CYS 135 134 134 CYS CYS A . n A 1 136 GLU 136 135 135 GLU GLU A . n A 1 137 ILE 137 136 136 ILE ILE A . n A 1 138 THR 138 137 137 THR THR A . n A 1 139 GLY 139 138 138 GLY GLY A . n A 1 140 PHE 140 139 139 PHE PHE A . n A 1 141 GLY 141 140 140 GLY GLY A . n A 1 142 LYS 142 141 141 LYS LYS A . n A 1 143 GLU 143 142 142 GLU GLU A . n A 1 144 ASN 144 143 143 ASN ASN A . n A 1 145 SER 145 144 144 SER SER A . n A 1 146 THR 146 145 145 THR THR A . n A 1 147 ASP 147 146 146 ASP ASP A . n A 1 148 TYR 148 147 147 TYR TYR A . n A 1 149 LEU 149 148 148 LEU LEU A . n A 1 150 TYR 150 149 149 TYR TYR A . n A 1 151 PRO 151 150 150 PRO PRO A . n A 1 152 GLU 152 151 151 GLU GLU A . n A 1 153 GLN 153 152 152 GLN GLN A . n A 1 154 LEU 154 153 153 LEU LEU A . n A 1 155 LYS 155 154 154 LYS LYS A . n A 1 156 MET 156 155 155 MET MET A . n A 1 157 THR 157 156 156 THR THR A . n A 1 158 VAL 158 157 157 VAL VAL A . n A 1 159 VAL 159 158 158 VAL VAL A . n A 1 160 LYS 160 159 159 LYS LYS A . n A 1 161 LEU 161 160 160 LEU LEU A . n A 1 162 ILE 162 161 161 ILE ILE A . n A 1 163 SER 163 162 162 SER SER A . n A 1 164 HIS 164 163 163 HIS HIS A . n A 1 165 ARG 165 164 164 ARG ARG A . n A 1 166 GLU 166 165 165 GLU GLU A . n A 1 167 CYS 167 166 166 CYS CYS A . n A 1 168 GLN 168 167 167 GLN GLN A . n A 1 169 GLN 169 168 168 GLN GLN A . n A 1 170 PRO 170 169 169 PRO PRO A . n A 1 171 HIS 171 170 170 HIS HIS A . n A 1 172 TYR 172 171 171 TYR TYR A . n A 1 173 TYR 173 172 172 TYR TYR A . n A 1 174 GLY 174 173 173 GLY GLY A . n A 1 175 SER 175 174 174 SER SER A . n A 1 176 GLU 176 175 175 GLU GLU A . n A 1 177 VAL 177 176 176 VAL VAL A . n A 1 178 THR 178 177 177 THR THR A . n A 1 179 THR 179 178 178 THR THR A . n A 1 180 LYS 180 179 179 LYS LYS A . n A 1 181 MET 181 180 180 MET MET A . n A 1 182 LEU 182 181 181 LEU LEU A . n A 1 183 CYS 183 182 182 CYS CYS A . n A 1 184 ALA 184 183 183 ALA ALA A . n A 1 185 ALA 185 184 184 ALA ALA A . n A 1 186 ASP 186 185 185 ASP ASP A . n A 1 187 PRO 187 186 186 PRO PRO A . n A 1 188 GLN 188 187 187 GLN GLN A . n A 1 189 TRP 189 188 188 TRP TRP A . n A 1 190 LYS 190 189 189 LYS LYS A . n A 1 191 THR 191 190 190 THR THR A . n A 1 192 ASP 192 191 191 ASP ASP A . n A 1 193 SER 193 192 192 SER SER A . n A 1 194 CYS 194 193 193 CYS CYS A . n A 1 195 GLN 195 194 194 GLN GLN A . n A 1 196 GLY 196 195 195 GLY GLY A . n A 1 197 ASP 197 196 196 ASP ASP A . n A 1 198 SER 198 197 197 SER SER A . n A 1 199 GLY 199 198 198 GLY GLY A . n A 1 200 GLY 200 199 199 GLY GLY A . n A 1 201 PRO 201 200 200 PRO PRO A . n A 1 202 LEU 202 201 201 LEU LEU A . n A 1 203 VAL 203 202 202 VAL VAL A . n A 1 204 CYS 204 203 203 CYS CYS A . n A 1 205 SER 205 204 204 SER SER A . n A 1 206 LEU 206 205 205 LEU LEU A . n A 1 207 GLN 207 206 206 GLN GLN A . n A 1 208 GLY 208 207 207 GLY GLY A . n A 1 209 ARG 209 208 208 ARG ARG A . n A 1 210 MET 210 209 209 MET MET A . n A 1 211 THR 211 210 210 THR THR A . n A 1 212 LEU 212 211 211 LEU LEU A . n A 1 213 THR 213 212 212 THR THR A . n A 1 214 GLY 214 213 213 GLY GLY A . n A 1 215 ILE 215 214 214 ILE ILE A . n A 1 216 VAL 216 215 215 VAL VAL A . n A 1 217 SER 217 216 216 SER SER A . n A 1 218 TRP 218 217 217 TRP TRP A . n A 1 219 GLY 219 218 218 GLY GLY A . n A 1 220 ARG 220 219 219 ARG ARG A . n A 1 221 GLY 221 220 220 GLY GLY A . n A 1 222 CYS 222 221 221 CYS CYS A . n A 1 223 ALA 223 222 222 ALA ALA A . n A 1 224 LEU 224 223 223 LEU LEU A . n A 1 225 LYS 225 224 224 LYS LYS A . n A 1 226 ASP 226 225 225 ASP ASP A . n A 1 227 LYS 227 226 226 LYS LYS A . n A 1 228 PRO 228 227 227 PRO PRO A . n A 1 229 GLY 229 228 228 GLY GLY A . n A 1 230 VAL 230 229 229 VAL VAL A . n A 1 231 TYR 231 230 230 TYR TYR A . n A 1 232 THR 232 231 231 THR THR A . n A 1 233 ARG 233 232 232 ARG ARG A . n A 1 234 VAL 234 233 233 VAL VAL A . n A 1 235 SER 235 234 234 SER SER A . n A 1 236 HIS 236 235 235 HIS HIS A . n A 1 237 PHE 237 236 236 PHE PHE A . n A 1 238 LEU 238 237 237 LEU LEU A . n A 1 239 PRO 239 238 238 PRO PRO A . n A 1 240 TRP 240 239 239 TRP TRP A . n A 1 241 ILE 241 240 240 ILE ILE A . n A 1 242 ARG 242 241 241 ARG ARG A . n A 1 243 SER 243 242 242 SER SER A . n A 1 244 HIS 244 243 243 HIS HIS A . n A 1 245 THR 245 244 244 THR THR A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 497 1 1001 1 497 497 A . C 3 HOH 1 1002 1 HOH HOH A . C 3 HOH 2 1003 2 HOH HOH A . C 3 HOH 3 1004 3 HOH HOH A . C 3 HOH 4 1005 4 HOH HOH A . C 3 HOH 5 1006 5 HOH HOH A . C 3 HOH 6 1007 6 HOH HOH A . C 3 HOH 7 1008 7 HOH HOH A . C 3 HOH 8 1009 8 HOH HOH A . C 3 HOH 9 1010 9 HOH HOH A . C 3 HOH 10 1011 10 HOH HOH A . C 3 HOH 11 1012 11 HOH HOH A . C 3 HOH 12 1013 12 HOH HOH A . C 3 HOH 13 1014 13 HOH HOH A . C 3 HOH 14 1015 14 HOH HOH A . C 3 HOH 15 1016 15 HOH HOH A . C 3 HOH 16 1017 16 HOH HOH A . C 3 HOH 17 1018 17 HOH HOH A . C 3 HOH 18 1019 18 HOH HOH A . C 3 HOH 19 1020 19 HOH HOH A . C 3 HOH 20 1021 20 HOH HOH A . C 3 HOH 21 1022 21 HOH HOH A . C 3 HOH 22 1023 22 HOH HOH A . C 3 HOH 23 1024 23 HOH HOH A . C 3 HOH 24 1025 24 HOH HOH A . C 3 HOH 25 1026 25 HOH HOH A . C 3 HOH 26 1027 26 HOH HOH A . C 3 HOH 27 1028 27 HOH HOH A . C 3 HOH 28 1029 28 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-09-30 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR refinement 98.0 ? 1 CCP4 'data scaling' '(SCALA)' ? 2 X-PLOR phasing . ? 3 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 C _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 GLY _pdbx_validate_rmsd_angle.auth_seq_id_1 199 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 N _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 PRO _pdbx_validate_rmsd_angle.auth_seq_id_2 200 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CA _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 PRO _pdbx_validate_rmsd_angle.auth_seq_id_3 200 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 128.48 _pdbx_validate_rmsd_angle.angle_target_value 119.30 _pdbx_validate_rmsd_angle.angle_deviation 9.18 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.50 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 29 ? ? -112.01 -75.28 2 1 SER A 42 ? ? -138.42 -152.58 3 1 PRO A 51 ? ? -70.39 28.69 4 1 TYR A 125 ? ? 56.29 19.68 5 1 ASN A 126 ? ? -118.93 79.33 6 1 TYR A 171 ? ? -106.30 -110.90 7 1 SER A 216 ? ? -122.03 -65.61 # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag Y _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 1 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id A _pdbx_unobs_or_zero_occ_atoms.auth_comp_id CYS _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 120 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id SG _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id A _pdbx_unobs_or_zero_occ_atoms.label_comp_id CYS _pdbx_unobs_or_zero_occ_atoms.label_seq_id 121 _pdbx_unobs_or_zero_occ_atoms.label_atom_id SG # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '6-[AMINO(IMINO)METHYL]-N-[(4R)-4-ETHYL-1,2,3,4-TETRAHYDROISOQUINOLIN-6-YL]-2-NAPHTHAMIDE' 497 3 water HOH #