HEADER HYDROLASE 07-APR-03 1OYU TITLE LONG-DISTANCE CONFORMATIONAL CHANGES IN A PROTEIN ENGINEERED BY TITLE 2 MODULATED SEQUENCE DUPLICATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSOZYME; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: LYSIS PROTEIN, MURAMIDASE, ENDOLYSIN; COMPND 5 EC: 3.2.1.17; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE T4; SOURCE 3 ORGANISM_TAXID: 10665; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: RR1; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PHS1403 KEYWDS SEQUENCE DUPLICATION, DESIGN OF STRUCTURAL SWITCHES, TANDEM REPEAT, KEYWDS 2 PROTEIN DESIGN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.SAGERMANN,L.GAY,B.W.MATTHEWS REVDAT 7 16-AUG-23 1OYU 1 REMARK REVDAT 6 27-OCT-21 1OYU 1 REMARK SEQADV REVDAT 5 14-AUG-19 1OYU 1 REMARK REVDAT 4 24-JUL-19 1OYU 1 REMARK REVDAT 3 24-FEB-09 1OYU 1 VERSN REVDAT 2 23-DEC-03 1OYU 1 JRNL REVDAT 1 08-JUL-03 1OYU 0 JRNL AUTH M.SAGERMANN,L.GAY,B.W.MATTHEWS JRNL TITL LONG-DISTANCE CONFORMATIONAL CHANGES IN A PROTEIN ENGINEERED JRNL TITL 2 BY MODULATED SEQUENCE DUPLICATION JRNL REF PROC.NATL.ACAD.SCI.USA V. 100 9191 2003 JRNL REFN ISSN 0027-8424 JRNL PMID 12869697 JRNL DOI 10.1073/PNAS.1633549100 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.SAGERMANN,W.A.BAASE,B.W.MATTHEWS REMARK 1 TITL STRUCTURAL CHARACTERIZATION OF AN ENGINEERED TANDEM REPEAT REMARK 1 TITL 2 CONTRASTS THE IMPORTANCE OF CONTEXT AND SEQUENCE IN PROTEIN REMARK 1 TITL 3 FOLDING REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 96 6078 1999 REMARK 1 REFN ISSN 0027-8424 REMARK 1 DOI 10.1073/PNAS.96.11.6078 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TNT REMARK 3 AUTHORS : TRONRUD,TEN EYCK,MATTHEWS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 12441 REMARK 3 REMARK 3 USING DATA ABOVE SIGMA CUTOFF. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.324 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 991 REMARK 3 REMARK 3 USING ALL DATA, NO SIGMA CUTOFF. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 12441 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2658 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 122 REMARK 3 REMARK 3 WILSON B VALUE (FROM FCALC, A**2) : 43.700 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. RMS WEIGHT COUNT REMARK 3 BOND LENGTHS (A) : 0.010 ; NULL ; NULL REMARK 3 BOND ANGLES (DEGREES) : 1.647 ; NULL ; NULL REMARK 3 TORSION ANGLES (DEGREES) : 15.975; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES (A) : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES (A) : NULL ; NULL ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS (A**2) : NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS (A) : NULL ; NULL ; NULL REMARK 3 REMARK 3 INCORRECT CHIRAL-CENTERS (COUNT) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 RESTRAINT LIBRARIES. REMARK 3 STEREOCHEMISTRY : ENGH & HUBER REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS : ANISOTROPIC REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 IN MOLECULE A, THE DENSITY BETWEEN RESIDUES 53-64 IS VERY POOR. REMARK 3 THE OCCUPANCY OF THESE ATOMS HAS BEEN SET TO ZERO. REMARK 3 IN MOLECULE B, THE DENSITY FOR THE MAIN CHAIN WAS CLEARLY VISIBLE REMARK 3 IN OMIT MAPS, HOWEVER, THE DENSITY IS WEAK AND NO SIDE CHAIN REMARK 3 DENSITY COULD BE IDENTIFIED. AFTER SEVERAL TRIALS OF REFINEMENT, REMARK 3 THE OCCUPANCY HAS BEEN SET TO 0.6 FOR ATOMS OF RESIDUES 53-64. REMARK 3 ALSO, THE FINAL AMINO ACIDS ASN174 AND LEU175 COULD NOT BE REMARK 3 LOCALIZED IN THE STRUCTURE. REMARK 4 REMARK 4 1OYU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-APR-03. REMARK 100 THE DEPOSITION ID IS D_1000018814. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-NOV-01 REMARK 200 TEMPERATURE (KELVIN) : 170 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL7-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99 REMARK 200 MONOCHROMATOR : FLAT MIRROR, SINGLE SI CRYSTAL REMARK 200 BEND REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13538 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 36.620 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07200 REMARK 200 FOR THE DATA SET : 8.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.6 REMARK 200 DATA REDUNDANCY IN SHELL : 5.21 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.22000 REMARK 200 FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 3LZM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% POLY-ETHYLENE GLYCOL 4000, 50MM REMARK 280 PHOSPHATE BUFFER, 0.2MM AMMONIUM ACETATE, 20% ISOPROPANOL, PH REMARK 280 5.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 106.95000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 30.17500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 30.17500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 53.47500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 30.17500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 30.17500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 160.42500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 30.17500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 30.17500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 53.47500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 30.17500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 30.17500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 160.42500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 106.95000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: TWO MOLECULES IN THE ASYMMETRIC UNIT, A AND B, REFINEMENT REMARK 300 WAS CARRIED OUT IN THE ABSENCE OF NCS RELATIONSHIP REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 174 REMARK 465 LEU A 175 REMARK 465 ASN B 174 REMARK 465 LEU B 175 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 51 CG OD1 ND2 REMARK 470 LYS A 54 CG CD CE NZ REMARK 470 SER A 55 OG REMARK 470 GLU A 56 CG CD OE1 OE2 REMARK 470 LEU A 57 CG CD1 CD2 REMARK 470 ASP A 58 CG OD1 OD2 REMARK 470 LYS A 59 CG CD CE NZ REMARK 470 ILE A 61 CG1 CG2 CD1 REMARK 470 ASN B 51 CG OD1 ND2 REMARK 470 LYS B 54 CG CD CE NZ REMARK 470 SER B 55 OG REMARK 470 GLU B 56 CG CD OE1 OE2 REMARK 470 LEU B 57 CG CD1 CD2 REMARK 470 ASP B 58 CG OD1 OD2 REMARK 470 LYS B 59 CG CD CE NZ REMARK 470 ILE B 61 CG1 CG2 CD1 REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 LYS A 54 REMARK 475 SER A 55 REMARK 475 GLU A 56 REMARK 475 LEU A 57 REMARK 475 ASP A 58 REMARK 475 LYS A 59 REMARK 475 ALA A 60 REMARK 475 ILE A 61 REMARK 475 GLY A 62 REMARK 475 GLY A 63 REMARK 475 GLY A 64 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N ARG B 107 O HOH B 521 1.84 REMARK 500 C GLY A 88 O HOH A 561 1.96 REMARK 500 C ASN A 79 O HOH A 505 2.02 REMARK 500 C LEU B 102 O HOH B 543 2.10 REMARK 500 O PHE A 78 O HOH A 505 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 5 CD GLU A 5 OE2 0.068 REMARK 500 GLU B 11 CD GLU B 11 OE2 0.070 REMARK 500 GLU B 45 CD GLU B 45 OE2 0.069 REMARK 500 GLU B 75 CD GLU B 75 OE2 0.073 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 20 CB - CG - OD2 ANGL. DEV. = -6.3 DEGREES REMARK 500 ASP A 47 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ASP A 47 CB - CG - OD2 ANGL. DEV. = -6.5 DEGREES REMARK 500 ASP A 72 CB - CG - OD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 ASP A 100 CB - CG - OD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 ASP A 170 CB - CG - OD1 ANGL. DEV. = 5.4 DEGREES REMARK 500 ASP A 170 CB - CG - OD2 ANGL. DEV. = -5.6 DEGREES REMARK 500 ASP B 20 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP B 20 CB - CG - OD2 ANGL. DEV. = -6.7 DEGREES REMARK 500 ASP B 47 CB - CG - OD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 ASP B 72 CB - CG - OD2 ANGL. DEV. = -5.9 DEGREES REMARK 500 ASP B 81 CB - CG - OD2 ANGL. DEV. = -6.4 DEGREES REMARK 500 ASP B 138 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 ASP B 170 CB - CG - OD2 ANGL. DEV. = -5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 20 -178.96 -65.36 REMARK 500 PRO A 37 49.35 -80.53 REMARK 500 SER A 55 -71.21 -48.47 REMARK 500 LYS A 59 170.82 -38.99 REMARK 500 ALA A 60 -171.48 -63.54 REMARK 500 ILE A 61 -25.04 -149.45 REMARK 500 ASP B 20 -163.40 -51.15 REMARK 500 ILE B 29 74.98 -109.10 REMARK 500 SER B 55 65.28 -175.23 REMARK 500 GLU B 56 57.30 -170.74 REMARK 500 LYS B 59 28.91 41.04 REMARK 500 ASP B 72 -6.01 67.60 REMARK 500 ILE B 89 -71.69 -52.48 REMARK 500 PHE B 125 52.18 -65.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 261L RELATED DB: PDB REMARK 900 STRUCTURAL CHARACTERISATION OF AN ENGINEERED TANDEM REPEAT REMARK 900 CONTRASTS THE IMPORTANCE OF CONTEXT AND SEQUENCE IN PROTEIN FOLDING REMARK 900 RELATED ID: 262L RELATED DB: PDB REMARK 900 STRUCTURAL CHARACTERISATION OF AN ENGINEERED TANDEM REPEAT REMARK 900 CONTRASTS THE IMPORTANCE OF CONTEXT AND SEQUENCE IN PROTEIN FOLDING DBREF 1OYU A 1 175 UNP P00720 LYS_BPT4 1 164 DBREF 1OYU B 1 175 UNP P00720 LYS_BPT4 1 164 SEQADV 1OYU ASN A 40 UNP P00720 INSERTION SEQADV 1OYU ALA A 41 UNP P00720 INSERTION SEQADV 1OYU ALA A 42 UNP P00720 INSERTION SEQADV 1OYU LYS A 43 UNP P00720 INSERTION SEQADV 1OYU SER A 44 UNP P00720 INSERTION SEQADV 1OYU GLU A 45 UNP P00720 INSERTION SEQADV 1OYU LEU A 46 UNP P00720 INSERTION SEQADV 1OYU ASP A 47 UNP P00720 INSERTION SEQADV 1OYU LYS A 48 UNP P00720 INSERTION SEQADV 1OYU ALA A 49 UNP P00720 INSERTION SEQADV 1OYU ILE A 50 UNP P00720 INSERTION SEQADV 1OYU GLY A 63 UNP P00720 ENGINEERED MUTATION SEQADV 1OYU GLY A 64 UNP P00720 ENGINEERED MUTATION SEQADV 1OYU GLY A 65 UNP P00720 ENGINEERED MUTATION SEQADV 1OYU GLY A 66 UNP P00720 ENGINEERED MUTATION SEQADV 1OYU ALA A 108 UNP P00720 CYS ENGINEERED MUTATION SEQADV 1OYU ASN B 40 UNP P00720 INSERTION SEQADV 1OYU ALA B 41 UNP P00720 INSERTION SEQADV 1OYU ALA B 42 UNP P00720 INSERTION SEQADV 1OYU LYS B 43 UNP P00720 INSERTION SEQADV 1OYU SER B 44 UNP P00720 INSERTION SEQADV 1OYU GLU B 45 UNP P00720 INSERTION SEQADV 1OYU LEU B 46 UNP P00720 INSERTION SEQADV 1OYU ASP B 47 UNP P00720 INSERTION SEQADV 1OYU LYS B 48 UNP P00720 INSERTION SEQADV 1OYU ALA B 49 UNP P00720 INSERTION SEQADV 1OYU ILE B 50 UNP P00720 INSERTION SEQADV 1OYU GLY B 63 UNP P00720 ENGINEERED MUTATION SEQADV 1OYU GLY B 64 UNP P00720 ENGINEERED MUTATION SEQADV 1OYU GLY B 65 UNP P00720 ENGINEERED MUTATION SEQADV 1OYU GLY B 66 UNP P00720 ENGINEERED MUTATION SEQADV 1OYU ALA B 108 UNP P00720 CYS ENGINEERED MUTATION SEQRES 1 A 175 MET ASN ILE PHE GLU MET LEU ARG ILE ASP GLU GLY LEU SEQRES 2 A 175 ARG LEU LYS ILE TYR LYS ASP THR GLU GLY TYR TYR THR SEQRES 3 A 175 ILE GLY ILE GLY HIS LEU LEU THR LYS SER PRO SER LEU SEQRES 4 A 175 ASN ALA ALA LYS SER GLU LEU ASP LYS ALA ILE ASN ALA SEQRES 5 A 175 ALA LYS SER GLU LEU ASP LYS ALA ILE GLY GLY GLY GLY SEQRES 6 A 175 GLY GLY VAL ILE THR LYS ASP GLU ALA GLU LYS LEU PHE SEQRES 7 A 175 ASN GLN ASP VAL ASP ALA ALA VAL ARG GLY ILE LEU ARG SEQRES 8 A 175 ASN ALA LYS LEU LYS PRO VAL TYR ASP SER LEU ASP ALA SEQRES 9 A 175 VAL ARG ARG ALA ALA LEU ILE ASN MET VAL PHE GLN MET SEQRES 10 A 175 GLY GLU THR GLY VAL ALA GLY PHE THR ASN SER LEU ARG SEQRES 11 A 175 MET LEU GLN GLN LYS ARG TRP ASP GLU ALA ALA VAL ASN SEQRES 12 A 175 LEU ALA LYS SER ARG TRP TYR ASN GLN THR PRO ASN ARG SEQRES 13 A 175 ALA LYS ARG VAL ILE THR THR PHE ARG THR GLY THR TRP SEQRES 14 A 175 ASP ALA TYR LYS ASN LEU SEQRES 1 B 175 MET ASN ILE PHE GLU MET LEU ARG ILE ASP GLU GLY LEU SEQRES 2 B 175 ARG LEU LYS ILE TYR LYS ASP THR GLU GLY TYR TYR THR SEQRES 3 B 175 ILE GLY ILE GLY HIS LEU LEU THR LYS SER PRO SER LEU SEQRES 4 B 175 ASN ALA ALA LYS SER GLU LEU ASP LYS ALA ILE ASN ALA SEQRES 5 B 175 ALA LYS SER GLU LEU ASP LYS ALA ILE GLY GLY GLY GLY SEQRES 6 B 175 GLY GLY VAL ILE THR LYS ASP GLU ALA GLU LYS LEU PHE SEQRES 7 B 175 ASN GLN ASP VAL ASP ALA ALA VAL ARG GLY ILE LEU ARG SEQRES 8 B 175 ASN ALA LYS LEU LYS PRO VAL TYR ASP SER LEU ASP ALA SEQRES 9 B 175 VAL ARG ARG ALA ALA LEU ILE ASN MET VAL PHE GLN MET SEQRES 10 B 175 GLY GLU THR GLY VAL ALA GLY PHE THR ASN SER LEU ARG SEQRES 11 B 175 MET LEU GLN GLN LYS ARG TRP ASP GLU ALA ALA VAL ASN SEQRES 12 B 175 LEU ALA LYS SER ARG TRP TYR ASN GLN THR PRO ASN ARG SEQRES 13 B 175 ALA LYS ARG VAL ILE THR THR PHE ARG THR GLY THR TRP SEQRES 14 B 175 ASP ALA TYR LYS ASN LEU FORMUL 3 HOH *122(H2 O) HELIX 1 1 ASN A 2 GLY A 12 1 11 HELIX 2 2 SER A 38 ILE A 50 1 13 HELIX 3 3 THR A 70 ARG A 91 1 22 HELIX 4 4 LEU A 95 LEU A 102 1 8 HELIX 5 5 ASP A 103 GLY A 118 1 16 HELIX 6 6 GLY A 118 GLY A 124 1 7 HELIX 7 7 PHE A 125 GLN A 134 1 10 HELIX 8 8 ARG A 136 LYS A 146 1 11 HELIX 9 9 SER A 147 THR A 153 1 7 HELIX 10 10 THR A 153 GLY A 167 1 15 HELIX 11 11 TRP A 169 LYS A 173 5 5 HELIX 12 12 ASN B 2 GLY B 12 1 11 HELIX 13 13 SER B 38 ALA B 52 1 15 HELIX 14 14 GLU B 73 ASN B 92 1 20 HELIX 15 15 LYS B 94 LEU B 102 1 9 HELIX 16 16 ASP B 103 GLY B 118 1 16 HELIX 17 17 GLY B 118 ALA B 123 1 6 HELIX 18 18 PHE B 125 GLN B 134 1 10 HELIX 19 19 ARG B 136 LYS B 146 1 11 HELIX 20 20 SER B 147 THR B 153 1 7 HELIX 21 21 THR B 153 GLY B 167 1 15 HELIX 22 22 TRP B 169 LYS B 173 5 5 SHEET 1 A 3 ARG A 14 LYS A 19 0 SHEET 2 A 3 TYR A 25 GLY A 28 -1 O THR A 26 N TYR A 18 SHEET 3 A 3 HIS A 31 THR A 34 -1 O LEU A 33 N TYR A 25 SHEET 1 B 3 ARG B 14 LYS B 19 0 SHEET 2 B 3 TYR B 25 GLY B 28 -1 O THR B 26 N TYR B 18 SHEET 3 B 3 HIS B 31 THR B 34 -1 O LEU B 33 N TYR B 25 CRYST1 60.350 60.350 213.900 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016570 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016570 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004675 0.00000