HEADER ANTIFUNGAL PROTEIN 10-APR-03 1P0A TITLE NMR STRUCTURE OF ETD135, MUTANT OF THE ANTIFUNGAL DEFENSIN ARD1 FROM TITLE 2 ARCHAEOPREPONA DEMOPHON COMPND MOL_ID: 1; COMPND 2 MOLECULE: DEFENSIN ARD1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 OTHER_DETAILS: ETD135 MUTANT SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOPREPONA DEMOPHON; SOURCE 3 ORGANISM_TAXID: 191427; SOURCE 4 EXPRESSION_SYSTEM: SACCHAROMYCES CEREVISIAE; SOURCE 5 EXPRESSION_SYSTEM_COMMON: BAKER'S YEAST; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 4932; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PEM35 KEYWDS ALPHA-BETA PROTEIN, CSAB MOTIF (CYSTEINE STABILIZED ALPHA-HELIX BETA- KEYWDS 2 SHEET MOTIF), ANTIFUNGAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR C.LANDON,M.GUENNEUGUES,F.BARBAULT,M.LEGRAIN,L.MENIN,V.SCHOTT, AUTHOR 2 F.VOVELLE,J.L.DIMARCQ REVDAT 3 23-FEB-22 1P0A 1 REMARK REVDAT 2 24-FEB-09 1P0A 1 VERSN REVDAT 1 09-MAR-04 1P0A 0 JRNL AUTH C.LANDON,F.BARBAULT,M.LEGRAIN,L.MENIN,M.GUENNEUGUES, JRNL AUTH 2 V.SCHOTT,F.VOVELLE,J.L.DIMARCQ JRNL TITL LEAD OPTIMIZATION OF ANTIFUNGAL PEPTIDES WITH 3D NMR JRNL TITL 2 STRUCTURES ANALYSIS. JRNL REF PROTEIN SCI. V. 13 703 2004 JRNL REFN ISSN 0961-8368 JRNL PMID 14978308 JRNL DOI 10.1110/PS.03404404 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE, CNX 2000.1 REMARK 3 AUTHORS : DELAGLIO (NMRPIPE), BRUNGER (CNX) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1P0A COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-APR-03. REMARK 100 THE DEPOSITION ID IS D_1000018857. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 4.3 REMARK 210 IONIC STRENGTH : 40MM NA ACETATE BUFFER REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 2MM ETD135, 40MM NA ACETATE REMARK 210 BUFFER REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : HOMONUCLEAR 2D DQF-COSY, TOCSY, REMARK 210 NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRVIEW 5.0.3, ARIA 1.1, CNX REMARK 210 2000.1 REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY AND THE LEAST RESTRAINT REMARK 210 VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: DETERMINED USING STANDARD 2D HOMONUCLEAR TECHNIQUES REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 CYS A 7 39.57 -96.57 REMARK 500 1 ASN A 13 36.78 -86.87 REMARK 500 1 HIS A 31 1.98 -150.56 REMARK 500 1 PHE A 35 -52.01 -168.36 REMARK 500 1 ASN A 37 47.59 -65.98 REMARK 500 2 CYS A 7 50.31 -111.10 REMARK 500 2 SER A 16 -44.94 70.27 REMARK 500 2 ASN A 17 106.68 -161.43 REMARK 500 2 HIS A 31 30.39 -148.52 REMARK 500 2 CYS A 32 -138.16 57.29 REMARK 500 2 SER A 34 -159.28 -163.85 REMARK 500 2 ASN A 37 147.02 -176.97 REMARK 500 2 VAL A 38 32.43 -92.77 REMARK 500 3 ASN A 13 46.99 -79.96 REMARK 500 3 THR A 15 -56.87 -149.26 REMARK 500 3 SER A 16 -51.11 67.83 REMARK 500 3 HIS A 31 -13.02 -144.09 REMARK 500 3 SER A 34 -20.82 -153.14 REMARK 500 3 LEU A 36 61.79 67.52 REMARK 500 3 ASN A 37 65.25 -67.44 REMARK 500 4 ASN A 13 38.02 -92.28 REMARK 500 4 ASN A 17 113.78 -163.28 REMARK 500 4 CYS A 32 -37.91 76.15 REMARK 500 5 ASN A 13 38.71 -80.24 REMARK 500 5 ASN A 17 113.41 -165.98 REMARK 500 5 CYS A 32 -121.74 56.45 REMARK 500 5 SER A 34 160.87 64.89 REMARK 500 5 PHE A 35 -61.93 68.95 REMARK 500 5 LEU A 36 -53.25 -120.55 REMARK 500 5 VAL A 38 47.72 -76.93 REMARK 500 6 HIS A 31 20.12 -143.37 REMARK 500 6 CYS A 32 -119.25 61.14 REMARK 500 6 SER A 34 43.65 -161.71 REMARK 500 7 ASN A 13 48.17 -87.68 REMARK 500 7 ASN A 17 38.34 -158.56 REMARK 500 7 HIS A 31 17.58 -158.51 REMARK 500 7 CYS A 32 -138.93 59.08 REMARK 500 7 SER A 34 155.54 71.88 REMARK 500 7 ASN A 37 119.93 63.80 REMARK 500 7 VAL A 38 -42.68 -173.23 REMARK 500 8 ASN A 13 37.75 -89.19 REMARK 500 8 ASN A 17 116.53 -163.83 REMARK 500 8 HIS A 31 109.35 -167.41 REMARK 500 8 PHE A 35 -30.87 -34.19 REMARK 500 9 SER A 16 -47.28 69.03 REMARK 500 9 HIS A 31 25.90 -146.87 REMARK 500 9 CYS A 32 -144.70 58.56 REMARK 500 9 SER A 34 -139.71 69.44 REMARK 500 9 LEU A 36 66.85 -151.28 REMARK 500 10 CYS A 7 43.35 -84.94 REMARK 500 REMARK 500 THIS ENTRY HAS 56 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1OZZ RELATED DB: PDB REMARK 900 STRUCTURE OF ARD1 REMARK 900 RELATED ID: 1P00 RELATED DB: PDB REMARK 900 STRUCTURE OF ETD151, MUTANT OF ARD1 REMARK 999 REMARK 999 SEQUENCE REMARK 999 AT THE TIME OF PROCESSING, NO SEQUENCE REMARK 999 DATABASE REFERENCE WAS AVAILABLE FOR REMARK 999 THIS SEQUENCE. THERE IS A A36L MUTATION REMARK 999 COMPARED TO THE WILD TYPE SEQUENCE. DBREF 1P0A A 1 44 UNP P84156 P84156_9NEOP 1 44 SEQRES 1 A 44 ASP LYS LEU ILE GLY SER CYS VAL TRP GLY ALA VAL ASN SEQRES 2 A 44 TYR THR SER ASN CYS ASN ALA GLU CYS LYS ARG ARG GLY SEQRES 3 A 44 TYR LYS GLY GLY HIS CYS GLY SER PHE LEU ASN VAL ASN SEQRES 4 A 44 CYS TRP CYS GLU THR HELIX 1 1 ASN A 17 GLY A 26 1 10 SHEET 1 A 3 LYS A 2 SER A 6 0 SHEET 2 A 3 ASN A 39 GLU A 43 -1 O CYS A 42 N LYS A 2 SHEET 3 A 3 GLY A 29 GLY A 30 -1 N GLY A 29 O GLU A 43 SSBOND 1 CYS A 7 CYS A 32 1555 1555 2.03 SSBOND 2 CYS A 18 CYS A 40 1555 1555 2.03 SSBOND 3 CYS A 22 CYS A 42 1555 1555 2.03 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1