HEADER PROTEIN BINDING 12-APR-03 1P1E TITLE STRUCTURAL INSIGHTS INTO THE INTER-DOMAIN CHAPERONING OF TANDEM PDZ TITLE 2 DOMAINS IN GLUTAMATE RECEPTOR INTERACTING PROTEINS COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTAMATE RECEPTOR INTERACTING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 18-118; COMPND 5 SYNONYM: PDZ4; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: NORWAY RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET32A KEYWDS PDZ DOMAIN, GLUTAMATE RECEPTOR, CHAPERONING DOMAIN, PROTEIN BINDING EXPDTA SOLUTION NMR NUMMDL 20 MDLTYP MINIMIZED AVERAGE AUTHOR W.FENG,Y.SHI,M.LI,M.ZHANG REVDAT 3 23-FEB-22 1P1E 1 REMARK REVDAT 2 24-FEB-09 1P1E 1 VERSN REVDAT 1 11-NOV-03 1P1E 0 JRNL AUTH W.FENG,Y.SHI,M.LI,M.ZHANG JRNL TITL TANDEM PDZ REPEATS IN GLUTAMATE RECEPTOR-INTERACTING JRNL TITL 2 PROTEINS HAVE A NOVEL MODE OF PDZ DOMAIN-MEDIATED TARGET JRNL TITL 3 BINDING JRNL REF NAT.STRUCT.BIOL. V. 10 972 2003 JRNL REFN ISSN 1072-8368 JRNL PMID 14555997 JRNL DOI 10.1038/NSB992 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1, CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE REMARK 3 -KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ,RICE,SIMONSON, REMARK 3 WARREN (CNS), BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-KUNSTLEVE, REMARK 3 JIANG,KUSZEWSKI,NILGES, PANNU,READ,RICE,SIMONSON,WARREN (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1P1E COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-APR-03. REMARK 100 THE DEPOSITION ID IS D_1000018894. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 100MM POTASSIUM PHOSPHATE REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1.5MM UNIFORMLY 15N LABELLED REMARK 210 PDZ4; 100MM PHOSPHATE BUFFER; REMARK 210 1.5MM UNIFORMLY 15N/13C LABELLED REMARK 210 PDZ4; 100MM PHOSPHATE BUFFER; REMARK 210 1.5MM UNIFORMLY 15N/13C LABELLED REMARK 210 PDZ4; 100MM PHOSPHATE BUFFER REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY; HNCACB, REMARK 210 CBCA(CO)NH, HNCO REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 750 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 13 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 22 102.69 174.77 REMARK 500 1 VAL A 34 -67.05 -98.81 REMARK 500 1 VAL A 45 -39.95 -155.30 REMARK 500 1 THR A 50 164.72 58.14 REMARK 500 1 SER A 58 41.78 -164.34 REMARK 500 1 TYR A 59 123.19 -176.32 REMARK 500 1 ALA A 62 43.25 -81.15 REMARK 500 1 ASP A 63 31.20 168.18 REMARK 500 1 VAL A 71 34.52 -170.97 REMARK 500 1 MET A 79 27.48 -141.14 REMARK 500 1 ALA A 80 61.83 -178.86 REMARK 500 1 THR A 86 150.29 61.68 REMARK 500 1 ASP A 88 -81.23 61.94 REMARK 500 1 SER A 89 114.82 -161.02 REMARK 500 1 SER A 105 -4.54 78.97 REMARK 500 1 ALA A 116 46.19 -140.65 REMARK 500 1 GLU A 117 53.70 -179.82 REMARK 500 2 VAL A 19 77.84 -100.74 REMARK 500 2 THR A 22 132.18 167.55 REMARK 500 2 VAL A 34 -68.90 -155.42 REMARK 500 2 PHE A 46 44.46 173.38 REMARK 500 2 ALA A 47 114.83 -175.57 REMARK 500 2 THR A 50 -170.88 46.29 REMARK 500 2 LEU A 51 133.93 -177.52 REMARK 500 2 SER A 58 50.17 -175.40 REMARK 500 2 TYR A 59 134.15 -173.79 REMARK 500 2 ALA A 62 41.00 -89.87 REMARK 500 2 ASP A 63 33.30 171.82 REMARK 500 2 VAL A 71 -58.97 -137.29 REMARK 500 2 MET A 79 29.23 -170.29 REMARK 500 2 ALA A 80 46.40 -176.18 REMARK 500 2 THR A 86 107.24 58.55 REMARK 500 2 ASP A 88 78.37 -65.91 REMARK 500 2 SER A 89 -49.73 -151.94 REMARK 500 2 SER A 105 -5.02 79.35 REMARK 500 2 ALA A 116 48.03 -174.51 REMARK 500 2 GLU A 117 48.70 -174.04 REMARK 500 3 VAL A 19 75.09 -109.18 REMARK 500 3 THR A 22 105.79 167.13 REMARK 500 3 THR A 35 -66.54 -133.91 REMARK 500 3 PHE A 46 132.66 -171.60 REMARK 500 3 ALA A 47 110.12 59.24 REMARK 500 3 SER A 52 22.82 -154.78 REMARK 500 3 ALA A 62 38.34 -86.87 REMARK 500 3 ASP A 63 26.11 -179.72 REMARK 500 3 VAL A 71 -52.90 -145.03 REMARK 500 3 MET A 79 -65.36 -134.98 REMARK 500 3 THR A 86 142.32 63.45 REMARK 500 3 ASP A 88 -79.99 62.95 REMARK 500 3 SER A 89 106.78 -179.80 REMARK 500 REMARK 500 THIS ENTRY HAS 367 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1P1D RELATED DB: PDB REMARK 900 1P1D CONTAINS 196 RESIDUES PER 1 MODEL DBREF 1P1E A 18 118 UNP P97879 GRIP1_RAT 463 563 SEQRES 1 A 101 GLN VAL VAL HIS THR GLU THR THR GLU VAL VAL LEU THR SEQRES 2 A 101 ALA ASP PRO VAL THR GLY PHE GLY ILE GLN LEU GLN GLY SEQRES 3 A 101 SER VAL PHE ALA THR GLU THR LEU SER SER PRO PRO LEU SEQRES 4 A 101 ILE SER TYR ILE GLU ALA ASP SER PRO ALA GLU ARG CYS SEQRES 5 A 101 GLY VAL LEU GLN ILE GLY ASP ARG VAL MET ALA ILE ASN SEQRES 6 A 101 GLY ILE PRO THR GLU ASP SER THR PHE GLU GLU ALA ASN SEQRES 7 A 101 GLN LEU LEU ARG ASP SER SER ILE THR SER LYS VAL THR SEQRES 8 A 101 LEU GLU ILE GLU PHE ASP VAL ALA GLU SER HELIX 1 1 SER A 64 CYS A 69 1 6 HELIX 2 2 THR A 90 ASP A 100 1 11 HELIX 3 3 SER A 101 THR A 104 5 4 SHEET 1 A 3 GLU A 23 THR A 30 0 SHEET 2 A 3 LYS A 106 PHE A 113 -1 O PHE A 113 N GLU A 23 SHEET 3 A 3 ARG A 77 ILE A 81 -1 N ARG A 77 O GLU A 112 SHEET 1 B 2 LEU A 41 GLN A 42 0 SHEET 2 B 2 LEU A 56 ILE A 57 -1 O LEU A 56 N GLN A 42 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1