HEADER RNA BINDING PROTEIN 14-APR-03 1P1T TITLE NMR STRUCTURE OF THE N-TERMINAL RRM DOMAIN OF CLEAVAGE STIMULATION TITLE 2 FACTOR 64 KDA SUBUNIT COMPND MOL_ID: 1; COMPND 2 MOLECULE: CLEAVAGE STIMULATION FACTOR, 64 KDA SUBUNIT; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: N-TERMINAL RRM OF CSTF-64; COMPND 5 SYNONYM: CSTF 64 KDA SUBUNIT, CF-1 64 KDA SUBUNIT; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CSTF2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS RNA RECOGNITION MOTIF, C-TERMINAL HELIX, N-TERMINAL HELIX, RNA KEYWDS 2 BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR J.M.PEREZ-CANADILLAS,G.VARANI REVDAT 3 23-FEB-22 1P1T 1 REMARK REVDAT 2 24-FEB-09 1P1T 1 VERSN REVDAT 1 12-AUG-03 1P1T 0 JRNL AUTH J.M.PEREZ-CANADILLAS,G.VARANI JRNL TITL RECOGNITION OF GU-RICH POLYADENYLATION REGULATORY ELEMENTS JRNL TITL 2 BY HUMAN CSTF-64 PROTEIN JRNL REF EMBO J. V. 22 2821 2003 JRNL REFN ISSN 0261-4189 JRNL PMID 12773396 JRNL DOI 10.1093/EMBOJ/CDG259 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE 2001, DYANA 1.5 REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, PFEIFER, BAX REMARK 3 (NMRPIPE), GUNTERT, MUMENTHALER, HERRMANN (DYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURES ARE BASED ON A TOTAL OF REMARK 3 1486 NOE-DERIVED DISTANCE CONTRAINTS AND 115 DIHEDRAL ANGLE REMARK 3 RESTRAINS FOR PHI AND PSI BACKBONE ANGLES OBTAINED FROM THE REMARK 3 ANALYSIS OF THE 13C CHEMICAL SHIFTS. REMARK 4 REMARK 4 1P1T COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-APR-03. REMARK 100 THE DEPOSITION ID IS D_1000018907. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 300 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 20MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM CSTF U-15N, 20MM PHOSPHATE REMARK 210 BUFFER; 1MM CSTF U-15N,13C, 20MM REMARK 210 PHOSPHATE BUFFER; 1MM CSTF , REMARK 210 20MM PHOSPHATE BUFFER REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY; 15N-HSQC; 13C- REMARK 210 HSQC; HNCA; HNCO; CBCA(CO)NH; REMARK 210 HCCH-COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : DRX; DMX; AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : DYANA 1.5, TALOS 2001 REMARK 210 METHOD USED : SIMULATED ANNEALING TORSION REMARK 210 ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 40 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : THE SUBMITTED CONFORMER MODELS REMARK 210 ARE THE 20 STRUCTURES WITH THE REMARK 210 LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONCANCE NMR REMARK 210 SPECTROSCOPY REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 10 45.25 177.43 REMARK 500 1 ARG A 16 76.12 -111.18 REMARK 500 1 SER A 17 125.04 175.27 REMARK 500 1 LEU A 77 -90.92 -103.14 REMARK 500 1 ASN A 78 88.65 37.62 REMARK 500 1 PHE A 82 -40.52 178.76 REMARK 500 1 ARG A 85 -66.90 -144.02 REMARK 500 1 ALA A 86 142.03 164.06 REMARK 500 2 PRO A 9 -162.52 -75.07 REMARK 500 2 ALA A 10 89.94 -170.57 REMARK 500 2 ARG A 16 -61.48 -93.10 REMARK 500 2 SER A 17 115.00 -37.49 REMARK 500 2 PRO A 24 -164.12 -74.94 REMARK 500 2 LEU A 77 -92.00 -103.46 REMARK 500 2 ASN A 78 85.00 36.34 REMARK 500 2 PHE A 82 -43.94 -178.60 REMARK 500 2 ARG A 85 -69.64 -139.16 REMARK 500 2 ALA A 86 142.19 164.76 REMARK 500 2 ARG A 88 99.72 -66.93 REMARK 500 2 THR A 106 111.40 -160.53 REMARK 500 2 ALA A 108 89.85 64.50 REMARK 500 3 ALA A 10 59.34 -151.47 REMARK 500 3 ARG A 16 71.62 -107.78 REMARK 500 3 SER A 17 126.34 176.31 REMARK 500 3 VAL A 43 -76.15 -72.06 REMARK 500 3 LEU A 77 -91.79 -103.62 REMARK 500 3 ASN A 78 87.09 37.38 REMARK 500 3 PHE A 82 -43.12 -174.61 REMARK 500 3 ARG A 85 -76.99 -142.50 REMARK 500 3 ALA A 86 141.08 172.30 REMARK 500 4 PRO A 9 -89.71 -74.99 REMARK 500 4 ALA A 10 -5.57 82.95 REMARK 500 4 ARG A 16 54.57 -115.08 REMARK 500 4 VAL A 43 -81.00 -66.07 REMARK 500 4 PHE A 45 114.21 -160.76 REMARK 500 4 LEU A 77 -91.35 -104.75 REMARK 500 4 ASN A 78 90.17 39.59 REMARK 500 4 PHE A 82 117.68 -178.27 REMARK 500 4 SER A 83 13.64 80.18 REMARK 500 5 ARG A 16 59.99 -110.04 REMARK 500 5 SER A 17 122.60 -170.79 REMARK 500 5 VAL A 43 -70.87 -75.13 REMARK 500 5 LEU A 77 -91.45 -102.08 REMARK 500 5 ASN A 78 89.00 37.29 REMARK 500 5 PHE A 82 117.64 -179.07 REMARK 500 5 SER A 83 13.31 82.26 REMARK 500 5 ALA A 108 71.55 50.69 REMARK 500 6 PRO A 9 -89.46 -75.02 REMARK 500 6 ALA A 10 100.27 165.35 REMARK 500 6 SER A 17 120.34 -34.13 REMARK 500 REMARK 500 THIS ENTRY HAS 201 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 1P1T A 8 111 UNP P33240 CSTF2_HUMAN 8 111 SEQRES 1 A 104 ASP PRO ALA VAL ASP ARG SER LEU ARG SER VAL PHE VAL SEQRES 2 A 104 GLY ASN ILE PRO TYR GLU ALA THR GLU GLU GLN LEU LYS SEQRES 3 A 104 ASP ILE PHE SER GLU VAL GLY PRO VAL VAL SER PHE ARG SEQRES 4 A 104 LEU VAL TYR ASP ARG GLU THR GLY LYS PRO LYS GLY TYR SEQRES 5 A 104 GLY PHE CYS GLU TYR GLN ASP GLN GLU THR ALA LEU SER SEQRES 6 A 104 ALA MET ARG ASN LEU ASN GLY ARG GLU PHE SER GLY ARG SEQRES 7 A 104 ALA LEU ARG VAL ASP ASN ALA ALA SER GLU LYS ASN LYS SEQRES 8 A 104 GLU GLU LEU LYS SER LEU GLY THR GLY ALA PRO VAL ILE HELIX 1 1 VAL A 11 ARG A 16 1 6 HELIX 2 2 THR A 28 GLU A 38 1 11 HELIX 3 3 ASP A 66 LEU A 77 1 12 HELIX 4 4 LYS A 96 GLY A 105 1 10 SHEET 1 A 4 SER A 44 ASP A 50 0 SHEET 2 A 4 LYS A 55 GLU A 63 -1 O PHE A 61 N ARG A 46 SHEET 3 A 4 VAL A 18 GLY A 21 -1 N VAL A 20 O GLY A 60 SHEET 4 A 4 ARG A 88 ASN A 91 -1 O ASP A 90 N PHE A 19 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1