HEADER HYDROLASE 29-APR-03 1P6E TITLE STRUCTURE OF THE D55N MUTANT OF PHOSPHOLIPASE C FROM BACILLUS CEREUS TITLE 2 IN COMPLEX WITH 1,2-DI-N-PENTANOYL-SN-GLYCERO-3-DITHIOPHOSPHOCHOLINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOLIPASE C; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PLC, PHOSPHATIDYLCHOLINE CHOLINEPHOSPHOHYDROLASE, CEREOLYSIN COMPND 5 A; COMPND 6 EC: 3.1.4.3; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS CEREUS; SOURCE 3 ORGANISM_TAXID: 1396; SOURCE 4 GENE: PLC; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: DH5-ALPHA; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMAL-C2 KEYWDS PROTEIN-PHOSPHOLIPID ANALOGUE COMPLEX, TRI ZN+2 METAL CORE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR N.M.ANTIKAINEN,A.F.MONZINGO,C.L.FRANKLIN,J.D.ROBERTUS,S.F.MARTIN REVDAT 4 16-AUG-23 1P6E 1 REMARK REVDAT 3 27-OCT-21 1P6E 1 REMARK SEQADV LINK REVDAT 2 24-FEB-09 1P6E 1 VERSN REVDAT 1 30-SEP-03 1P6E 0 JRNL AUTH N.M.ANTIKAINEN,A.F.MONZINGO,C.L.FRANKLIN,J.D.ROBERTUS, JRNL AUTH 2 S.F.MARTIN JRNL TITL USING X-RAY CRYSTALLOGRAPHY OF THE ASP55ASN MUTANT OF THE JRNL TITL 2 PHOSPHATIDYLCHOLINE-PREFERRING PHOSPHOLIPASE C FROM BACILLUS JRNL TITL 3 CEREUS TO SUPPORT THE MECHANISTIC ROLE OF ASP55 AS THE JRNL TITL 4 GENERAL BASE. JRNL REF ARCH.BIOCHEM.BIOPHYS. V. 417 81 2003 JRNL REFN ISSN 0003-9861 JRNL PMID 12921783 JRNL DOI 10.1016/S0003-9861(03)00343-6 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 12581 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1269 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2013 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 31 REMARK 3 SOLVENT ATOMS : 72 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.321 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1P6E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-APR-03. REMARK 100 THE DEPOSITION ID IS D_1000019064. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-APR-00 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : DOUBLE FOCUSING MIRRORS (NI&PT) REMARK 200 + NI FILTER REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13590 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : 0.09200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.30200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ID 1AH7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMOUNIUM SULPHATE, PH 6, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.10300 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 44.89750 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 44.89750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 55.65450 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 44.89750 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 44.89750 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 18.55150 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 44.89750 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 44.89750 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 55.65450 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 44.89750 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 44.89750 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 18.55150 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 37.10300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 3 50.80 -169.05 REMARK 500 ASP A 62 60.49 39.82 REMARK 500 PHE A 66 28.61 49.63 REMARK 500 TYR A 71 109.00 -162.59 REMARK 500 LYS A 168 -165.50 -117.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 248 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TRP A 1 N REMARK 620 2 TRP A 1 O 71.8 REMARK 620 3 HIS A 14 NE2 108.5 93.9 REMARK 620 4 ASP A 122 OD1 92.1 163.5 87.6 REMARK 620 5 PC5 A 601 S3 144.9 96.4 105.2 99.1 REMARK 620 6 PC5 A 601 S2 72.5 80.3 173.5 98.8 73.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 246 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 55 OD1 REMARK 620 2 HIS A 69 ND1 85.0 REMARK 620 3 HIS A 118 NE2 74.6 100.9 REMARK 620 4 ASP A 122 OD2 174.2 91.6 101.5 REMARK 620 5 PC5 A 601 S3 71.5 146.7 95.3 113.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 247 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 128 NE2 REMARK 620 2 HIS A 142 NE2 100.8 REMARK 620 3 GLU A 146 OE2 97.0 95.9 REMARK 620 4 GLU A 146 OE1 145.4 95.9 51.0 REMARK 620 5 PC5 A 601 S2 86.7 172.5 83.6 77.9 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 246 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 247 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 248 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PC5 A 601 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1AH7 RELATED DB: PDB REMARK 900 PHOSPHOLIPASE C FROM BACILLUS CEREUS REMARK 900 RELATED ID: 1P5X RELATED DB: PDB REMARK 900 D55N MUTANT OF PHOSPHOLIPASE C FROM BACILLUS CEREUS REMARK 900 RELATED ID: 1P6D RELATED DB: PDB REMARK 900 PHOSPHOLIPASE C FROM BACILLUS CEREUS IN COMPLEX WITH (3S)-3,4-DI-N- REMARK 900 HEXANOYLOXYBUTYL-1-PHOSPHOCHOLINE DBREF 1P6E A 1 245 UNP P09598 PHLC_BACCE 39 283 SEQADV 1P6E ASN A 55 UNP P09598 ASP 93 ENGINEERED MUTATION SEQRES 1 A 245 TRP SER ALA GLU ASP LYS HIS LYS GLU GLY VAL ASN SER SEQRES 2 A 245 HIS LEU TRP ILE VAL ASN ARG ALA ILE ASP ILE MET SER SEQRES 3 A 245 ARG ASN THR THR LEU VAL LYS GLN ASP ARG VAL ALA GLN SEQRES 4 A 245 LEU ASN GLU TRP ARG THR GLU LEU GLU ASN GLY ILE TYR SEQRES 5 A 245 ALA ALA ASN TYR GLU ASN PRO TYR TYR ASP ASN SER THR SEQRES 6 A 245 PHE ALA SER HIS PHE TYR ASP PRO ASP ASN GLY LYS THR SEQRES 7 A 245 TYR ILE PRO PHE ALA LYS GLN ALA LYS GLU THR GLY ALA SEQRES 8 A 245 LYS TYR PHE LYS LEU ALA GLY GLU SER TYR LYS ASN LYS SEQRES 9 A 245 ASP MET LYS GLN ALA PHE PHE TYR LEU GLY LEU SER LEU SEQRES 10 A 245 HIS TYR LEU GLY ASP VAL ASN GLN PRO MET HIS ALA ALA SEQRES 11 A 245 ASN PHE THR ASN LEU SER TYR PRO GLN GLY PHE HIS SER SEQRES 12 A 245 LYS TYR GLU ASN PHE VAL ASP THR ILE LYS ASP ASN TYR SEQRES 13 A 245 LYS VAL THR ASP GLY ASN GLY TYR TRP ASN TRP LYS GLY SEQRES 14 A 245 THR ASN PRO GLU GLU TRP ILE HIS GLY ALA ALA VAL VAL SEQRES 15 A 245 ALA LYS GLN ASP TYR SER GLY ILE VAL ASN ASP ASN THR SEQRES 16 A 245 LYS ASP TRP PHE VAL LYS ALA ALA VAL SER GLN GLU TYR SEQRES 17 A 245 ALA ASP LYS TRP ARG ALA GLU VAL THR PRO MET THR GLY SEQRES 18 A 245 LYS ARG LEU MET ASP ALA GLN ARG VAL THR ALA GLY TYR SEQRES 19 A 245 ILE GLN LEU TRP PHE ASP THR TYR GLY ASP ARG HET ZN A 246 1 HET ZN A 247 1 HET ZN A 248 1 HET PC5 A 601 28 HETNAM ZN ZINC ION HETNAM PC5 1,2-DI-N-PENTANOYL-SN-GLYCERO-3-DITHIOPHOSPHOCHOLINE FORMUL 2 ZN 3(ZN 2+) FORMUL 5 PC5 C18 H36 N O6 P S2 FORMUL 6 HOH *72(H2 O) HELIX 1 1 LYS A 8 VAL A 11 5 4 HELIX 2 2 ASN A 12 ASN A 28 1 17 HELIX 3 3 LYS A 33 TRP A 43 1 11 HELIX 4 4 TRP A 43 GLU A 57 1 15 HELIX 5 5 PHE A 66 PHE A 70 5 5 HELIX 6 6 GLN A 85 ASN A 103 1 19 HELIX 7 7 ASP A 105 VAL A 123 1 19 HELIX 8 8 GLN A 125 ALA A 130 1 6 HELIX 9 9 GLY A 140 LYS A 153 1 14 HELIX 10 10 ASP A 154 LYS A 157 5 4 HELIX 11 11 ASN A 171 ASP A 186 1 16 HELIX 12 12 TYR A 187 ILE A 190 5 4 HELIX 13 13 ASN A 192 ALA A 202 1 11 HELIX 14 14 SER A 205 GLY A 243 1 39 LINK N TRP A 1 ZN ZN A 248 1555 1555 2.33 LINK O TRP A 1 ZN ZN A 248 1555 1555 2.30 LINK NE2 HIS A 14 ZN ZN A 248 1555 1555 2.08 LINK OD1 ASN A 55 ZN ZN A 246 1555 1555 2.89 LINK ND1 HIS A 69 ZN ZN A 246 1555 1555 2.16 LINK NE2 HIS A 118 ZN ZN A 246 1555 1555 2.20 LINK OD2 ASP A 122 ZN ZN A 246 1555 1555 2.09 LINK OD1 ASP A 122 ZN ZN A 248 1555 1555 2.15 LINK NE2 HIS A 128 ZN ZN A 247 1555 1555 2.14 LINK NE2 HIS A 142 ZN ZN A 247 1555 1555 2.05 LINK OE2 GLU A 146 ZN ZN A 247 1555 1555 2.35 LINK OE1 GLU A 146 ZN ZN A 247 1555 1555 2.70 LINK ZN ZN A 246 S3 PC5 A 601 1555 1555 1.85 LINK ZN ZN A 247 S2 PC5 A 601 1555 1555 1.97 LINK ZN ZN A 248 S3 PC5 A 601 1555 1555 2.32 LINK ZN ZN A 248 S2 PC5 A 601 1555 1555 2.82 CISPEP 1 ASN A 58 PRO A 59 0 -0.10 CISPEP 2 TYR A 137 PRO A 138 0 -0.17 SITE 1 AC1 6 ASN A 55 HIS A 69 HIS A 118 ASP A 122 SITE 2 AC1 6 ZN A 248 PC5 A 601 SITE 1 AC2 4 HIS A 128 HIS A 142 GLU A 146 PC5 A 601 SITE 1 AC3 5 TRP A 1 HIS A 14 ASP A 122 ZN A 246 SITE 2 AC3 5 PC5 A 601 SITE 1 AC4 17 TRP A 1 GLU A 4 HIS A 14 ASN A 55 SITE 2 AC4 17 TYR A 56 PHE A 66 PRO A 81 HIS A 118 SITE 3 AC4 17 ASP A 122 HIS A 128 THR A 133 ASN A 134 SITE 4 AC4 17 SER A 143 GLU A 146 ZN A 246 ZN A 247 SITE 5 AC4 17 ZN A 248 CRYST1 89.795 89.795 74.206 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011136 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011136 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013476 0.00000 TER 2014 ARG A 245 HETATM 2015 ZN ZN A 246 39.249 21.942 8.527 1.00 24.26 ZN HETATM 2016 ZN ZN A 247 41.883 26.040 5.056 1.00 28.99 ZN HETATM 2017 ZN ZN A 248 42.473 23.040 8.533 1.00 21.96 ZN HETATM 2018 C14 PC5 A 601 41.513 21.340 -4.809 1.00 77.52 C HETATM 2019 C13 PC5 A 601 41.131 22.698 -4.146 1.00 79.60 C HETATM 2020 C12 PC5 A 601 40.562 22.552 -2.715 1.00 80.80 C HETATM 2021 C11 PC5 A 601 41.353 23.527 -1.828 1.00 82.67 C HETATM 2022 C10 PC5 A 601 41.045 23.692 -0.322 1.00 86.42 C HETATM 2023 O7 PC5 A 601 41.835 24.419 0.323 1.00 84.90 O HETATM 2024 O6 PC5 A 601 39.894 23.026 0.409 1.00 82.77 O HETATM 2025 C9 PC5 A 601 39.542 22.912 1.849 1.00 79.52 C HETATM 2026 C8 PC5 A 601 39.215 24.207 2.618 1.00 76.91 C HETATM 2027 O5 PC5 A 601 38.014 24.740 1.990 1.00 76.90 O HETATM 2028 C15 PC5 A 601 37.904 25.829 0.980 1.00 78.79 C HETATM 2029 O8 PC5 A 601 38.727 26.776 1.014 1.00 75.67 O HETATM 2030 C16 PC5 A 601 36.515 26.038 0.294 1.00 74.35 C HETATM 2031 C17 PC5 A 601 36.454 25.997 -1.246 1.00 71.68 C HETATM 2032 C18 PC5 A 601 36.744 24.575 -1.791 1.00 70.64 C HETATM 2033 C19 PC5 A 601 37.063 24.579 -3.308 1.00 69.67 C HETATM 2034 C7 PC5 A 601 39.026 24.242 4.178 1.00 75.28 C HETATM 2035 O1 PC5 A 601 39.448 23.155 5.069 1.00 69.86 O HETATM 2036 P1 PC5 A 601 40.910 22.950 5.830 1.00 23.42 P HETATM 2037 S2 PC5 A 601 41.992 24.375 6.102 1.00 67.16 S HETATM 2038 S3 PC5 A 601 40.756 21.903 7.460 1.00 61.32 S HETATM 2039 O4 PC5 A 601 41.475 21.936 4.634 1.00 64.56 O HETATM 2040 C5 PC5 A 601 42.779 21.937 3.929 1.00 63.89 C HETATM 2041 C4 PC5 A 601 43.203 20.588 3.240 1.00 62.51 C HETATM 2042 N1 PC5 A 601 42.416 19.837 2.087 1.00 62.59 N HETATM 2043 C1 PC5 A 601 43.123 18.548 1.716 1.00 62.12 C HETATM 2044 C2 PC5 A 601 40.995 19.393 2.445 1.00 61.44 C HETATM 2045 C3 PC5 A 601 42.461 20.587 0.759 1.00 62.11 C HETATM 2046 O HOH A 252 44.347 20.957 14.873 1.00 20.07 O HETATM 2047 O HOH A 253 43.999 22.087 17.298 1.00 11.45 O HETATM 2048 O HOH A 255 48.562 23.932 6.917 1.00 20.30 O HETATM 2049 O HOH A 257 42.293 31.382 -2.095 1.00 17.35 O HETATM 2050 O HOH A 258 42.774 17.814 4.804 1.00 46.71 O HETATM 2051 O HOH A 260 45.256 12.989 11.859 1.00 24.24 O HETATM 2052 O HOH A 262 55.826 13.053 8.515 1.00 39.82 O HETATM 2053 O HOH A 263 52.834 14.325 21.000 1.00 17.96 O HETATM 2054 O HOH A 264 56.111 13.877 21.557 1.00 19.57 O HETATM 2055 O HOH A 265 57.649 19.897 21.081 1.00 36.32 O HETATM 2056 O HOH A 266 30.727 12.923 0.527 1.00 33.22 O HETATM 2057 O HOH A 267 53.040 12.475 22.917 1.00 21.59 O HETATM 2058 O HOH A 268 54.698 14.229 24.866 1.00 24.81 O HETATM 2059 O HOH A 269 53.705 12.804 18.940 1.00 36.42 O HETATM 2060 O HOH A 270 51.545 11.523 15.191 1.00 31.65 O HETATM 2061 O HOH A 271 54.050 12.702 29.745 1.00 17.08 O HETATM 2062 O HOH A 273 56.248 15.329 32.725 1.00 25.57 O HETATM 2063 O HOH A 275 59.551 19.498 31.833 1.00 32.54 O HETATM 2064 O HOH A 277 49.234 11.103 36.620 1.00 17.04 O HETATM 2065 O HOH A 278 50.574 8.970 35.630 1.00 25.79 O HETATM 2066 O HOH A 279 50.594 7.725 33.209 1.00 44.07 O HETATM 2067 O HOH A 280 45.884 18.156 35.513 1.00 30.67 O HETATM 2068 O HOH A 281 28.676 10.652 22.588 1.00 22.65 O HETATM 2069 O HOH A 282 29.423 6.010 23.391 1.00 35.92 O HETATM 2070 O HOH A 284 55.298 14.022 17.216 1.00 47.38 O HETATM 2071 O HOH A 285 58.340 22.144 8.826 1.00 31.59 O HETATM 2072 O HOH A 288 55.456 21.666 21.745 1.00 17.15 O HETATM 2073 O HOH A 290 57.975 25.457 31.321 1.00 24.26 O HETATM 2074 O HOH A 291 29.589 19.732 9.978 1.00 31.62 O HETATM 2075 O HOH A 292 28.738 18.041 11.918 1.00 30.36 O HETATM 2076 O HOH A 294 27.757 23.726 7.271 1.00 41.12 O HETATM 2077 O HOH A 295 22.898 27.283 3.125 1.00 26.70 O HETATM 2078 O HOH A 296 31.191 34.091 1.273 1.00 18.72 O HETATM 2079 O HOH A 297 34.648 33.947 -1.276 1.00 19.53 O HETATM 2080 O HOH A 298 37.411 36.933 3.180 1.00 29.78 O HETATM 2081 O HOH A 299 32.156 37.009 7.477 1.00 31.10 O HETATM 2082 O HOH A 300 35.211 38.678 7.165 1.00 26.16 O HETATM 2083 O HOH A 301 40.259 28.112 -6.496 1.00 33.24 O HETATM 2084 O HOH A 303 33.735 22.163 29.944 1.00 39.42 O HETATM 2085 O HOH A 304 26.774 23.191 19.524 1.00 34.20 O HETATM 2086 O HOH A 306 35.720 1.749 23.047 1.00 34.39 O HETATM 2087 O HOH A 309 28.386 18.153 28.718 1.00 43.91 O HETATM 2088 O HOH A 311 27.816 8.833 20.432 1.00 28.20 O HETATM 2089 O HOH A 312 26.539 17.609 21.553 1.00 37.88 O HETATM 2090 O HOH A 315 39.158 40.055 15.775 1.00 18.74 O HETATM 2091 O HOH A 317 42.650 24.583 30.549 1.00 18.01 O HETATM 2092 O HOH A 319 53.282 30.202 -5.405 1.00 42.00 O HETATM 2093 O HOH A 321 53.854 38.089 8.759 1.00 24.78 O HETATM 2094 O HOH A 322 57.222 34.669 14.424 1.00 29.30 O HETATM 2095 O HOH A 323 58.002 37.401 15.269 1.00 27.66 O HETATM 2096 O HOH A 324 60.872 29.415 8.337 1.00 35.85 O HETATM 2097 O HOH A 325 56.155 37.211 17.615 1.00 37.94 O HETATM 2098 O HOH A 328 52.025 26.660 33.184 1.00 32.26 O HETATM 2099 O HOH A 329 59.137 28.196 22.298 1.00 27.67 O HETATM 2100 O HOH A 330 43.707 22.541 35.565 1.00 41.50 O HETATM 2101 O HOH A 331 40.966 23.462 32.559 1.00 28.52 O HETATM 2102 O HOH A 332 56.729 19.211 9.392 1.00 33.05 O HETATM 2103 O HOH A 333 36.490 40.148 16.451 1.00 30.69 O HETATM 2104 O HOH A 335 26.182 30.569 10.056 1.00 35.28 O HETATM 2105 O HOH A 337 26.605 31.583 7.869 1.00 38.17 O HETATM 2106 O HOH A 340 35.614 22.072 33.478 1.00 39.17 O HETATM 2107 O HOH A 348 57.355 17.092 11.750 1.00 39.83 O HETATM 2108 O HOH A 358 32.985 2.513 20.287 1.00 47.57 O HETATM 2109 O HOH A 364 43.596 41.621 10.135 1.00 36.45 O HETATM 2110 O HOH A 367 38.773 39.609 1.763 1.00 42.93 O HETATM 2111 O HOH A 376 35.833 34.378 24.062 1.00 35.69 O HETATM 2112 O HOH A 383 46.082 4.081 19.431 1.00 36.01 O HETATM 2113 O HOH A 388 55.635 25.861 33.250 1.00 50.25 O HETATM 2114 O HOH A 432 45.291 30.925 30.246 1.00 49.30 O HETATM 2115 O HOH A 454 33.627 11.035 2.029 1.00 29.46 O HETATM 2116 O HOH A 502 40.435 9.709 2.531 1.00 44.17 O HETATM 2117 O HOH A 518 52.252 40.873 5.439 1.00 59.06 O CONECT 1 2017 CONECT 4 2017 CONECT 114 2017 CONECT 451 2015 CONECT 570 2015 CONECT 975 2015 CONECT 1006 2017 CONECT 1007 2015 CONECT 1056 2016 CONECT 1167 2016 CONECT 1202 2016 CONECT 1203 2016 CONECT 2015 451 570 975 1007 CONECT 2015 2038 CONECT 2016 1056 1167 1202 1203 CONECT 2016 2037 CONECT 2017 1 4 114 1006 CONECT 2017 2037 2038 CONECT 2018 2019 CONECT 2019 2018 2020 CONECT 2020 2019 2021 CONECT 2021 2020 2022 CONECT 2022 2021 2023 2024 CONECT 2023 2022 CONECT 2024 2022 2025 CONECT 2025 2024 2026 CONECT 2026 2025 2027 2034 CONECT 2027 2026 2028 CONECT 2028 2027 2029 2030 CONECT 2029 2028 CONECT 2030 2028 2031 CONECT 2031 2030 2032 CONECT 2032 2031 2033 CONECT 2033 2032 CONECT 2034 2026 2035 CONECT 2035 2034 2036 CONECT 2036 2035 2037 2038 2039 CONECT 2037 2016 2017 2036 CONECT 2038 2015 2017 2036 CONECT 2039 2036 2040 CONECT 2040 2039 2041 CONECT 2041 2040 2042 CONECT 2042 2041 2043 2044 2045 CONECT 2043 2042 CONECT 2044 2042 CONECT 2045 2042 MASTER 308 0 4 14 0 0 10 6 2116 1 46 19 END