data_1P78 # _entry.id 1P78 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1P78 pdb_00001p78 10.2210/pdb1p78/pdb NDB PD0431 ? ? RCSB RCSB019094 ? ? WWPDB D_1000019094 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1P51 'Anabaena HU bound to AHU6 DNA' unspecified PDB 1P71 'Anabaena HU bound to TR3 DNA' unspecified PDB 1B8Z 'Thermotoga maritima protein alone' unspecified PDB 1IHF 'E. coli IHF bound to DNA' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1P78 _pdbx_database_status.recvd_initial_deposition_date 2003-04-30 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Swinger, K.S.' 1 'Lemberg, K.M.' 2 'Zhang, Y.' 3 'Rice, P.A.' 4 # _citation.id primary _citation.title 'Flexible DNA bending in HU-DNA cocrystal structures' _citation.journal_abbrev 'Embo J.' _citation.journal_volume 22 _citation.page_first 3749 _citation.page_last 3760 _citation.year 2003 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12853489 _citation.pdbx_database_id_DOI 10.1093/emboj/cdg351 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Swinger, K.S.' 1 ? primary 'Lemberg, K.M.' 2 ? primary 'Zhang, Y.' 3 ? primary 'Rice, P.A.' 4 ? # _cell.entry_id 1P78 _cell.length_a 37.430 _cell.length_b 91.810 _cell.length_c 100.750 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1P78 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*TP*GP*CP*AP*TP*AP*TP*CP*AP*AP*TP*TP*TP*GP*TP*TP*GP*CP*AP*CP*C)-3'" 6388.145 2 ? ? ? ? 2 polymer man 'DNA-binding protein HU' 10089.584 2 ? ? ? ? 3 water nat water 18.015 94 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no ;(DT)(DG)(DC)(DA)(DT)(DA)(DT)(DC)(DA)(DA)(DT)(DT)(DT)(DG)(DT)(DT)(DG)(DC)(DA)(DC) (DC) ; TGCATATCAATTTGTTGCACC C,D ? 2 'polypeptide(L)' no no ;MNKGELVDAVAEKASVTKKQADAVLTAALETIIEAVSSGDKVTLVGFGSFESRERKAREGRNPKTNEKMEIPATRVPAFS AGKLFREKVAPPKA ; ;MNKGELVDAVAEKASVTKKQADAVLTAALETIIEAVSSGDKVTLVGFGSFESRERKAREGRNPKTNEKMEIPATRVPAFS AGKLFREKVAPPKA ; A,B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DG n 1 3 DC n 1 4 DA n 1 5 DT n 1 6 DA n 1 7 DT n 1 8 DC n 1 9 DA n 1 10 DA n 1 11 DT n 1 12 DT n 1 13 DT n 1 14 DG n 1 15 DT n 1 16 DT n 1 17 DG n 1 18 DC n 1 19 DA n 1 20 DC n 1 21 DC n 2 1 MET n 2 2 ASN n 2 3 LYS n 2 4 GLY n 2 5 GLU n 2 6 LEU n 2 7 VAL n 2 8 ASP n 2 9 ALA n 2 10 VAL n 2 11 ALA n 2 12 GLU n 2 13 LYS n 2 14 ALA n 2 15 SER n 2 16 VAL n 2 17 THR n 2 18 LYS n 2 19 LYS n 2 20 GLN n 2 21 ALA n 2 22 ASP n 2 23 ALA n 2 24 VAL n 2 25 LEU n 2 26 THR n 2 27 ALA n 2 28 ALA n 2 29 LEU n 2 30 GLU n 2 31 THR n 2 32 ILE n 2 33 ILE n 2 34 GLU n 2 35 ALA n 2 36 VAL n 2 37 SER n 2 38 SER n 2 39 GLY n 2 40 ASP n 2 41 LYS n 2 42 VAL n 2 43 THR n 2 44 LEU n 2 45 VAL n 2 46 GLY n 2 47 PHE n 2 48 GLY n 2 49 SER n 2 50 PHE n 2 51 GLU n 2 52 SER n 2 53 ARG n 2 54 GLU n 2 55 ARG n 2 56 LYS n 2 57 ALA n 2 58 ARG n 2 59 GLU n 2 60 GLY n 2 61 ARG n 2 62 ASN n 2 63 PRO n 2 64 LYS n 2 65 THR n 2 66 ASN n 2 67 GLU n 2 68 LYS n 2 69 MET n 2 70 GLU n 2 71 ILE n 2 72 PRO n 2 73 ALA n 2 74 THR n 2 75 ARG n 2 76 VAL n 2 77 PRO n 2 78 ALA n 2 79 PHE n 2 80 SER n 2 81 ALA n 2 82 GLY n 2 83 LYS n 2 84 LEU n 2 85 PHE n 2 86 ARG n 2 87 GLU n 2 88 LYS n 2 89 VAL n 2 90 ALA n 2 91 PRO n 2 92 PRO n 2 93 LYS n 2 94 ALA n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Anabaena _entity_src_gen.pdbx_gene_src_gene 'HUP OR HANA OR ASR3935' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Anabaena sp.' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1167 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'RJ1878 lacks functional HU genes' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pET21A (pETAHU)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'chemically synthesized DNA' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP DBH_ANASP P05514 2 ;MNKGELVDAVAEKASVTKKQADAVLTAALETIIEAVSSGDKVTLVGFGSFESRERKAREGRNPKTNEKMEIPATRVPAFS AGKLFREKVAPPKA ; 1 ? 2 PDB 1P78 1P78 1 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1P78 A 1 ? 94 ? P05514 1 ? 94 ? 1 94 2 1 1P78 B 1 ? 94 ? P05514 1 ? 94 ? 1 94 3 2 1P78 C 1 ? 21 ? 1P78 1 ? 21 ? 1 21 4 2 1P78 D 1 ? 21 ? 1P78 1 ? 21 ? 1 21 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1P78 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.70 _exptl_crystal.density_percent_sol 54.08 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 292 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details ;Peg 5000 monomethyl ether, glycerol, tris, jeffamine, potassium chloride, calcium chloride, sodium azide, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 292K ; _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'Peg 5000' ? ? ? 1 2 1 'monomethyl ether' ? ? ? 1 3 1 glycerol ? ? ? 1 4 1 tris ? ? ? 1 5 1 jeffamine ? ? ? 1 6 1 'potassium chloride' ? ? ? 1 7 1 'calcium chloride' ? ? ? 1 8 1 'sodium azide' ? ? ? 1 9 1 H2O ? ? ? 1 10 2 'Peg 5000' ? ? ? 1 11 2 glycerol ? ? ? 1 12 2 'potassium chloride' ? ? ? 1 13 2 'calcium chloride' ? ? ? 1 14 2 'sodium azide' ? ? ? 1 15 2 H2O ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type CUSTOM-MADE _diffrn_detector.pdbx_collection_date 2002-02-14 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 220' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0078 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0078 # _reflns.entry_id 1P78 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3.0 _reflns.d_resolution_high 2.2 _reflns.d_resolution_low 50 _reflns.number_all 16454 _reflns.number_obs 16454 _reflns.percent_possible_obs 91.7 _reflns.pdbx_Rmerge_I_obs 0.05 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.3 _reflns.R_free_details ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.28 _reflns_shell.percent_possible_all 54.9 _reflns_shell.Rmerge_I_obs 0.376 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 4.2 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1P78 _refine.ls_number_reflns_obs 13935 _refine.ls_number_reflns_all 17158 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 25.00 _refine.ls_d_res_high 2.25 _refine.ls_percent_reflns_obs 85.16 _refine.ls_R_factor_obs 0.24089 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.23908 _refine.ls_R_factor_R_free 0.27589 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.6 _refine.ls_number_reflns_R_free 677 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.922 _refine.correlation_coeff_Fo_to_Fc_free 0.890 _refine.B_iso_mean 25.498 _refine.aniso_B[1][1] -0.60 _refine.aniso_B[2][2] 2.99 _refine.aniso_B[3][3] -2.39 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1P71' _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model 'restrained invidual isotropic (after TLS refinement)' _refine.pdbx_stereochemistry_target_values 'Refmac 5.1.24 library' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.398 _refine.pdbx_overall_ESU_R_Free 0.269 _refine.overall_SU_ML 0.244 _refine.overall_SU_B 10.913 _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1384 _refine_hist.pdbx_number_atoms_nucleic_acid 812 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 94 _refine_hist.number_atoms_total 2290 _refine_hist.d_res_high 2.25 _refine_hist.d_res_low 25.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.013 0.021 ? 2301 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.625 2.415 ? 3269 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.748 5.000 ? 182 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.081 0.200 ? 337 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 1434 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.227 0.200 ? 950 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.168 0.200 ? 137 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.253 0.200 ? 52 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.024 0.200 ? 2 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.421 1.500 ? 915 'X-RAY DIFFRACTION' ? r_mcangle_it 0.787 2.000 ? 1467 'X-RAY DIFFRACTION' ? r_scbond_it 1.688 3.000 ? 1386 'X-RAY DIFFRACTION' ? r_scangle_it 2.550 4.500 ? 1802 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 1 'medium positional' A 183 0.14 0.50 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? 1 'medium thermal' A 183 0.38 2.00 1 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? # _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 2.250 _refine_ls_shell.d_res_low 2.371 _refine_ls_shell.number_reflns_R_work 1235 _refine_ls_shell.R_factor_R_work 0.336 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.411 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 47 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 A 1 2 B 1 3 A 1 4 B # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 1 C VAL 7 . C THR 17 . A VAL 7 A THR 17 4 ? 1 2 1 D VAL 7 . D THR 17 . B VAL 7 B THR 17 4 ? 1 3 2 C GLN 20 . C GLU 34 . A GLN 20 A GLU 34 4 ? 1 4 2 D GLN 20 . D GLU 34 . B GLN 20 B GLU 34 4 ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? _struct_ncs_ens.point_group ? # _struct.entry_id 1P78 _struct.title 'Anabaena HU-DNA cocrystal structure (AHU2)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1P78 _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' _struct_keywords.text 'protein-DNA complex, DNA bending, HU, DNA BINDING PROTEIN-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? # _struct_biol.id 1 _struct_biol.details 'The assymetric unit contains one functional complex composed of a protein homodimer and duplex DNA.' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN C 2 ? SER C 15 ? ASN A 2 SER A 15 1 ? 14 HELX_P HELX_P2 2 THR C 17 ? SER C 38 ? THR A 17 SER A 38 1 ? 22 HELX_P HELX_P3 3 GLY C 82 ? ALA C 90 ? GLY A 82 ALA A 90 1 ? 9 HELX_P HELX_P4 4 ASN D 2 ? SER D 15 ? ASN B 2 SER B 15 1 ? 14 HELX_P HELX_P5 5 THR D 17 ? SER D 38 ? THR B 17 SER B 38 1 ? 22 HELX_P HELX_P6 6 GLY D 82 ? ALA D 90 ? GLY B 82 ALA B 90 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DT 1 N3 ? ? ? 1_555 B DA 19 N1 ? ? C DT 1 D DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DT 1 O4 ? ? ? 1_555 B DA 19 N6 ? ? C DT 1 D DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 18 N3 ? ? C DG 2 D DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 18 O2 ? ? C DG 2 D DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 18 N4 ? ? C DG 2 D DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG 17 N1 ? ? C DC 3 D DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG 17 O6 ? ? C DC 3 D DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG 17 N2 ? ? C DC 3 D DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 16 N3 ? ? C DA 4 D DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 16 O4 ? ? C DA 4 D DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 15 N3 ? ? C DA 6 D DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 15 O4 ? ? C DA 6 D DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 14 N1 ? ? C DC 8 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 14 O6 ? ? C DC 8 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 14 N2 ? ? C DC 8 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DA 9 N1 ? ? ? 1_555 B DT 13 N3 ? ? C DA 9 D DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DA 9 N6 ? ? ? 1_555 B DT 13 O4 ? ? C DA 9 D DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DA 10 N1 ? ? ? 1_555 B DT 12 N3 ? ? C DA 10 D DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DA 10 N6 ? ? ? 1_555 B DT 12 O4 ? ? C DA 10 D DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 11 N3 ? ? ? 1_555 B DT 11 O4 ? ? C DT 11 D DT 11 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog21 hydrog ? ? A DT 11 O2 ? ? ? 1_555 B DT 11 N3 ? ? C DT 11 D DT 11 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog22 hydrog ? ? A DT 12 N3 ? ? ? 1_555 B DA 10 N1 ? ? C DT 12 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DT 12 O4 ? ? ? 1_555 B DA 10 N6 ? ? C DT 12 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DT 13 N3 ? ? ? 1_555 B DA 9 N1 ? ? C DT 13 D DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DT 13 O4 ? ? ? 1_555 B DA 9 N6 ? ? C DT 13 D DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 14 N1 ? ? ? 1_555 B DC 8 N3 ? ? C DG 14 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 14 N2 ? ? ? 1_555 B DC 8 O2 ? ? C DG 14 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 14 O6 ? ? ? 1_555 B DC 8 N4 ? ? C DG 14 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DT 15 N3 ? ? ? 1_555 B DA 6 N1 ? ? C DT 15 D DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DT 15 O4 ? ? ? 1_555 B DA 6 N6 ? ? C DT 15 D DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DT 16 N3 ? ? ? 1_555 B DA 4 N1 ? ? C DT 16 D DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DT 16 O4 ? ? ? 1_555 B DA 4 N6 ? ? C DT 16 D DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DG 17 N1 ? ? ? 1_555 B DC 3 N3 ? ? C DG 17 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DG 17 N2 ? ? ? 1_555 B DC 3 O2 ? ? C DG 17 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DG 17 O6 ? ? ? 1_555 B DC 3 N4 ? ? C DG 17 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DC 18 N3 ? ? ? 1_555 B DG 2 N1 ? ? C DC 18 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DC 18 N4 ? ? ? 1_555 B DG 2 O6 ? ? C DC 18 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DC 18 O2 ? ? ? 1_555 B DG 2 N2 ? ? C DC 18 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DA 19 N1 ? ? ? 1_555 B DT 1 N3 ? ? C DA 19 D DT 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DA 19 N6 ? ? ? 1_555 B DT 1 O4 ? ? C DA 19 D DT 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B DC 18 O2 ? ? ? 1_555 B DC 20 N4 ? ? D DC 18 D DC 20 1_555 ? ? ? ? ? ? 'DC-DC MISPAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 2 ? C ? 3 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL C 42 ? LEU C 44 ? VAL A 42 LEU A 44 A 2 GLY C 48 ? ARG C 55 ? GLY A 48 ARG A 55 A 3 THR C 74 ? ALA C 81 ? THR A 74 ALA A 81 B 1 ARG C 58 ? ARG C 61 ? ARG A 58 ARG A 61 B 2 LYS C 68 ? ILE C 71 ? LYS A 68 ILE A 71 C 1 VAL D 42 ? LEU D 44 ? VAL B 42 LEU B 44 C 2 GLY D 48 ? ARG D 55 ? GLY B 48 ARG B 55 C 3 THR D 74 ? ALA D 81 ? THR B 74 ALA B 81 D 1 ARG D 58 ? ARG D 61 ? ARG B 58 ARG B 61 D 2 LYS D 68 ? ILE D 71 ? LYS B 68 ILE B 71 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL C 42 ? N VAL A 42 O PHE C 50 ? O PHE A 50 A 2 3 N GLU C 51 ? N GLU A 51 O ALA C 78 ? O ALA A 78 B 1 2 N ARG C 58 ? N ARG A 58 O ILE C 71 ? O ILE A 71 C 1 2 N VAL D 42 ? N VAL B 42 O PHE D 50 ? O PHE B 50 C 2 3 N GLU D 51 ? N GLU B 51 O ALA D 78 ? O ALA B 78 D 1 2 N ARG D 58 ? N ARG B 58 O ILE D 71 ? O ILE B 71 # _database_PDB_matrix.entry_id 1P78 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1P78 _atom_sites.fract_transf_matrix[1][1] 0.026717 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010892 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009926 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 1 1 DT T C . n A 1 2 DG 2 2 2 DG G C . n A 1 3 DC 3 3 3 DC C C . n A 1 4 DA 4 4 4 DA A C . n A 1 5 DT 5 5 5 DT T C . n A 1 6 DA 6 6 6 DA A C . n A 1 7 DT 7 7 7 DT T C . n A 1 8 DC 8 8 8 DC C C . n A 1 9 DA 9 9 9 DA A C . n A 1 10 DA 10 10 10 DA A C . n A 1 11 DT 11 11 11 DT T C . n A 1 12 DT 12 12 12 DT T C . n A 1 13 DT 13 13 13 DT T C . n A 1 14 DG 14 14 14 DG G C . n A 1 15 DT 15 15 15 DT T C . n A 1 16 DT 16 16 16 DT T C . n A 1 17 DG 17 17 17 DG G C . n A 1 18 DC 18 18 18 DC C C . n A 1 19 DA 19 19 19 DA A C . n A 1 20 DC 20 20 20 DC C C . n A 1 21 DC 21 21 ? ? ? C . n B 1 1 DT 1 1 1 DT T D . n B 1 2 DG 2 2 2 DG G D . n B 1 3 DC 3 3 3 DC C D . n B 1 4 DA 4 4 4 DA A D . n B 1 5 DT 5 5 5 DT T D . n B 1 6 DA 6 6 6 DA A D . n B 1 7 DT 7 7 7 DT T D . n B 1 8 DC 8 8 8 DC C D . n B 1 9 DA 9 9 9 DA A D . n B 1 10 DA 10 10 10 DA A D . n B 1 11 DT 11 11 11 DT T D . n B 1 12 DT 12 12 12 DT T D . n B 1 13 DT 13 13 13 DT T D . n B 1 14 DG 14 14 14 DG G D . n B 1 15 DT 15 15 15 DT T D . n B 1 16 DT 16 16 16 DT T D . n B 1 17 DG 17 17 17 DG G D . n B 1 18 DC 18 18 18 DC C D . n B 1 19 DA 19 19 19 DA A D . n B 1 20 DC 20 20 20 DC C D . n B 1 21 DC 21 21 21 DC C D . n C 2 1 MET 1 1 1 MET MET A . n C 2 2 ASN 2 2 2 ASN ASN A . n C 2 3 LYS 3 3 3 LYS LYS A . n C 2 4 GLY 4 4 4 GLY GLY A . n C 2 5 GLU 5 5 5 GLU GLU A . n C 2 6 LEU 6 6 6 LEU LEU A . n C 2 7 VAL 7 7 7 VAL VAL A . n C 2 8 ASP 8 8 8 ASP ASP A . n C 2 9 ALA 9 9 9 ALA ALA A . n C 2 10 VAL 10 10 10 VAL VAL A . n C 2 11 ALA 11 11 11 ALA ALA A . n C 2 12 GLU 12 12 12 GLU GLU A . n C 2 13 LYS 13 13 13 LYS LYS A . n C 2 14 ALA 14 14 14 ALA ALA A . n C 2 15 SER 15 15 15 SER SER A . n C 2 16 VAL 16 16 16 VAL VAL A . n C 2 17 THR 17 17 17 THR THR A . n C 2 18 LYS 18 18 18 LYS LYS A . n C 2 19 LYS 19 19 19 LYS LYS A . n C 2 20 GLN 20 20 20 GLN GLN A . n C 2 21 ALA 21 21 21 ALA ALA A . n C 2 22 ASP 22 22 22 ASP ASP A . n C 2 23 ALA 23 23 23 ALA ALA A . n C 2 24 VAL 24 24 24 VAL VAL A . n C 2 25 LEU 25 25 25 LEU LEU A . n C 2 26 THR 26 26 26 THR THR A . n C 2 27 ALA 27 27 27 ALA ALA A . n C 2 28 ALA 28 28 28 ALA ALA A . n C 2 29 LEU 29 29 29 LEU LEU A . n C 2 30 GLU 30 30 30 GLU GLU A . n C 2 31 THR 31 31 31 THR THR A . n C 2 32 ILE 32 32 32 ILE ILE A . n C 2 33 ILE 33 33 33 ILE ILE A . n C 2 34 GLU 34 34 34 GLU GLU A . n C 2 35 ALA 35 35 35 ALA ALA A . n C 2 36 VAL 36 36 36 VAL VAL A . n C 2 37 SER 37 37 37 SER SER A . n C 2 38 SER 38 38 38 SER SER A . n C 2 39 GLY 39 39 39 GLY GLY A . n C 2 40 ASP 40 40 40 ASP ASP A . n C 2 41 LYS 41 41 41 LYS LYS A . n C 2 42 VAL 42 42 42 VAL VAL A . n C 2 43 THR 43 43 43 THR THR A . n C 2 44 LEU 44 44 44 LEU LEU A . n C 2 45 VAL 45 45 45 VAL VAL A . n C 2 46 GLY 46 46 46 GLY GLY A . n C 2 47 PHE 47 47 47 PHE PHE A . n C 2 48 GLY 48 48 48 GLY GLY A . n C 2 49 SER 49 49 49 SER SER A . n C 2 50 PHE 50 50 50 PHE PHE A . n C 2 51 GLU 51 51 51 GLU GLU A . n C 2 52 SER 52 52 52 SER SER A . n C 2 53 ARG 53 53 53 ARG ARG A . n C 2 54 GLU 54 54 54 GLU GLU A . n C 2 55 ARG 55 55 55 ARG ARG A . n C 2 56 LYS 56 56 56 LYS LYS A . n C 2 57 ALA 57 57 57 ALA ALA A . n C 2 58 ARG 58 58 58 ARG ARG A . n C 2 59 GLU 59 59 59 GLU GLU A . n C 2 60 GLY 60 60 60 GLY GLY A . n C 2 61 ARG 61 61 61 ARG ARG A . n C 2 62 ASN 62 62 62 ASN ASN A . n C 2 63 PRO 63 63 63 PRO PRO A . n C 2 64 LYS 64 64 64 LYS LYS A . n C 2 65 THR 65 65 65 THR THR A . n C 2 66 ASN 66 66 66 ASN ASN A . n C 2 67 GLU 67 67 67 GLU GLU A . n C 2 68 LYS 68 68 68 LYS LYS A . n C 2 69 MET 69 69 69 MET MET A . n C 2 70 GLU 70 70 70 GLU GLU A . n C 2 71 ILE 71 71 71 ILE ILE A . n C 2 72 PRO 72 72 72 PRO PRO A . n C 2 73 ALA 73 73 73 ALA ALA A . n C 2 74 THR 74 74 74 THR THR A . n C 2 75 ARG 75 75 75 ARG ARG A . n C 2 76 VAL 76 76 76 VAL VAL A . n C 2 77 PRO 77 77 77 PRO PRO A . n C 2 78 ALA 78 78 78 ALA ALA A . n C 2 79 PHE 79 79 79 PHE PHE A . n C 2 80 SER 80 80 80 SER SER A . n C 2 81 ALA 81 81 81 ALA ALA A . n C 2 82 GLY 82 82 82 GLY GLY A . n C 2 83 LYS 83 83 83 LYS LYS A . n C 2 84 LEU 84 84 84 LEU LEU A . n C 2 85 PHE 85 85 85 PHE PHE A . n C 2 86 ARG 86 86 86 ARG ARG A . n C 2 87 GLU 87 87 87 GLU GLU A . n C 2 88 LYS 88 88 88 LYS LYS A . n C 2 89 VAL 89 89 89 VAL VAL A . n C 2 90 ALA 90 90 90 ALA ALA A . n C 2 91 PRO 91 91 91 PRO PRO A . n C 2 92 PRO 92 92 92 PRO PRO A . n C 2 93 LYS 93 93 ? ? ? A . n C 2 94 ALA 94 94 ? ? ? A . n D 2 1 MET 1 1 1 MET MET B . n D 2 2 ASN 2 2 2 ASN ASN B . n D 2 3 LYS 3 3 3 LYS LYS B . n D 2 4 GLY 4 4 4 GLY GLY B . n D 2 5 GLU 5 5 5 GLU GLU B . n D 2 6 LEU 6 6 6 LEU LEU B . n D 2 7 VAL 7 7 7 VAL VAL B . n D 2 8 ASP 8 8 8 ASP ASP B . n D 2 9 ALA 9 9 9 ALA ALA B . n D 2 10 VAL 10 10 10 VAL VAL B . n D 2 11 ALA 11 11 11 ALA ALA B . n D 2 12 GLU 12 12 12 GLU GLU B . n D 2 13 LYS 13 13 13 LYS LYS B . n D 2 14 ALA 14 14 14 ALA ALA B . n D 2 15 SER 15 15 15 SER SER B . n D 2 16 VAL 16 16 16 VAL VAL B . n D 2 17 THR 17 17 17 THR THR B . n D 2 18 LYS 18 18 18 LYS LYS B . n D 2 19 LYS 19 19 19 LYS LYS B . n D 2 20 GLN 20 20 20 GLN GLN B . n D 2 21 ALA 21 21 21 ALA ALA B . n D 2 22 ASP 22 22 22 ASP ASP B . n D 2 23 ALA 23 23 23 ALA ALA B . n D 2 24 VAL 24 24 24 VAL VAL B . n D 2 25 LEU 25 25 25 LEU LEU B . n D 2 26 THR 26 26 26 THR THR B . n D 2 27 ALA 27 27 27 ALA ALA B . n D 2 28 ALA 28 28 28 ALA ALA B . n D 2 29 LEU 29 29 29 LEU LEU B . n D 2 30 GLU 30 30 30 GLU GLU B . n D 2 31 THR 31 31 31 THR THR B . n D 2 32 ILE 32 32 32 ILE ILE B . n D 2 33 ILE 33 33 33 ILE ILE B . n D 2 34 GLU 34 34 34 GLU GLU B . n D 2 35 ALA 35 35 35 ALA ALA B . n D 2 36 VAL 36 36 36 VAL VAL B . n D 2 37 SER 37 37 37 SER SER B . n D 2 38 SER 38 38 38 SER SER B . n D 2 39 GLY 39 39 39 GLY GLY B . n D 2 40 ASP 40 40 40 ASP ASP B . n D 2 41 LYS 41 41 41 LYS LYS B . n D 2 42 VAL 42 42 42 VAL VAL B . n D 2 43 THR 43 43 43 THR THR B . n D 2 44 LEU 44 44 44 LEU LEU B . n D 2 45 VAL 45 45 45 VAL VAL B . n D 2 46 GLY 46 46 46 GLY GLY B . n D 2 47 PHE 47 47 47 PHE PHE B . n D 2 48 GLY 48 48 48 GLY GLY B . n D 2 49 SER 49 49 49 SER SER B . n D 2 50 PHE 50 50 50 PHE PHE B . n D 2 51 GLU 51 51 51 GLU GLU B . n D 2 52 SER 52 52 52 SER SER B . n D 2 53 ARG 53 53 53 ARG ARG B . n D 2 54 GLU 54 54 54 GLU GLU B . n D 2 55 ARG 55 55 55 ARG ARG B . n D 2 56 LYS 56 56 56 LYS LYS B . n D 2 57 ALA 57 57 57 ALA ALA B . n D 2 58 ARG 58 58 58 ARG ARG B . n D 2 59 GLU 59 59 59 GLU GLU B . n D 2 60 GLY 60 60 60 GLY GLY B . n D 2 61 ARG 61 61 61 ARG ARG B . n D 2 62 ASN 62 62 62 ASN ASN B . n D 2 63 PRO 63 63 63 PRO PRO B . n D 2 64 LYS 64 64 64 LYS LYS B . n D 2 65 THR 65 65 65 THR THR B . n D 2 66 ASN 66 66 66 ASN ASN B . n D 2 67 GLU 67 67 67 GLU GLU B . n D 2 68 LYS 68 68 68 LYS LYS B . n D 2 69 MET 69 69 69 MET MET B . n D 2 70 GLU 70 70 70 GLU GLU B . n D 2 71 ILE 71 71 71 ILE ILE B . n D 2 72 PRO 72 72 72 PRO PRO B . n D 2 73 ALA 73 73 73 ALA ALA B . n D 2 74 THR 74 74 74 THR THR B . n D 2 75 ARG 75 75 75 ARG ARG B . n D 2 76 VAL 76 76 76 VAL VAL B . n D 2 77 PRO 77 77 77 PRO PRO B . n D 2 78 ALA 78 78 78 ALA ALA B . n D 2 79 PHE 79 79 79 PHE PHE B . n D 2 80 SER 80 80 80 SER SER B . n D 2 81 ALA 81 81 81 ALA ALA B . n D 2 82 GLY 82 82 82 GLY GLY B . n D 2 83 LYS 83 83 83 LYS LYS B . n D 2 84 LEU 84 84 84 LEU LEU B . n D 2 85 PHE 85 85 85 PHE PHE B . n D 2 86 ARG 86 86 86 ARG ARG B . n D 2 87 GLU 87 87 87 GLU GLU B . n D 2 88 LYS 88 88 88 LYS LYS B . n D 2 89 VAL 89 89 89 VAL VAL B . n D 2 90 ALA 90 90 90 ALA ALA B . n D 2 91 PRO 91 91 91 PRO PRO B . n D 2 92 PRO 92 92 92 PRO PRO B . n D 2 93 LYS 93 93 ? ? ? B . n D 2 94 ALA 94 94 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HOH 1 22 2 HOH HOH C . E 3 HOH 2 23 7 HOH HOH C . E 3 HOH 3 24 13 HOH HOH C . E 3 HOH 4 25 33 HOH HOH C . E 3 HOH 5 26 36 HOH HOH C . E 3 HOH 6 27 41 HOH HOH C . E 3 HOH 7 28 42 HOH HOH C . E 3 HOH 8 29 43 HOH HOH C . E 3 HOH 9 30 45 HOH HOH C . E 3 HOH 10 31 48 HOH HOH C . E 3 HOH 11 32 51 HOH HOH C . E 3 HOH 12 33 53 HOH HOH C . E 3 HOH 13 34 57 HOH HOH C . E 3 HOH 14 35 63 HOH HOH C . E 3 HOH 15 36 65 HOH HOH C . E 3 HOH 16 37 67 HOH HOH C . E 3 HOH 17 38 68 HOH HOH C . E 3 HOH 18 39 73 HOH HOH C . E 3 HOH 19 40 77 HOH HOH C . E 3 HOH 20 41 80 HOH HOH C . E 3 HOH 21 42 88 HOH HOH C . E 3 HOH 22 43 90 HOH HOH C . E 3 HOH 23 44 93 HOH HOH C . F 3 HOH 1 22 14 HOH HOH D . F 3 HOH 2 23 23 HOH HOH D . F 3 HOH 3 24 28 HOH HOH D . F 3 HOH 4 25 55 HOH HOH D . F 3 HOH 5 26 60 HOH HOH D . F 3 HOH 6 27 61 HOH HOH D . F 3 HOH 7 28 69 HOH HOH D . F 3 HOH 8 29 71 HOH HOH D . F 3 HOH 9 30 75 HOH HOH D . F 3 HOH 10 31 76 HOH HOH D . F 3 HOH 11 32 82 HOH HOH D . F 3 HOH 12 33 83 HOH HOH D . F 3 HOH 13 34 92 HOH HOH D . F 3 HOH 14 35 98 HOH HOH D . G 3 HOH 1 95 3 HOH HOH A . G 3 HOH 2 96 4 HOH HOH A . G 3 HOH 3 97 9 HOH HOH A . G 3 HOH 4 98 11 HOH HOH A . G 3 HOH 5 99 18 HOH HOH A . G 3 HOH 6 100 19 HOH HOH A . G 3 HOH 7 101 21 HOH HOH A . G 3 HOH 8 102 22 HOH HOH A . G 3 HOH 9 103 27 HOH HOH A . G 3 HOH 10 104 29 HOH HOH A . G 3 HOH 11 105 31 HOH HOH A . G 3 HOH 12 106 32 HOH HOH A . G 3 HOH 13 107 37 HOH HOH A . G 3 HOH 14 108 38 HOH HOH A . G 3 HOH 15 109 40 HOH HOH A . G 3 HOH 16 110 46 HOH HOH A . G 3 HOH 17 111 47 HOH HOH A . G 3 HOH 18 112 49 HOH HOH A . G 3 HOH 19 113 52 HOH HOH A . G 3 HOH 20 114 62 HOH HOH A . G 3 HOH 21 115 64 HOH HOH A . G 3 HOH 22 116 66 HOH HOH A . G 3 HOH 23 117 72 HOH HOH A . G 3 HOH 24 118 78 HOH HOH A . G 3 HOH 25 119 81 HOH HOH A . G 3 HOH 26 120 86 HOH HOH A . G 3 HOH 27 121 89 HOH HOH A . G 3 HOH 28 122 91 HOH HOH A . G 3 HOH 29 123 95 HOH HOH A . G 3 HOH 30 124 97 HOH HOH A . G 3 HOH 31 125 100 HOH HOH A . G 3 HOH 32 126 101 HOH HOH A . G 3 HOH 33 127 102 HOH HOH A . H 3 HOH 1 95 1 HOH HOH B . H 3 HOH 2 96 5 HOH HOH B . H 3 HOH 3 97 6 HOH HOH B . H 3 HOH 4 98 8 HOH HOH B . H 3 HOH 5 99 10 HOH HOH B . H 3 HOH 6 100 15 HOH HOH B . H 3 HOH 7 101 16 HOH HOH B . H 3 HOH 8 102 17 HOH HOH B . H 3 HOH 9 103 24 HOH HOH B . H 3 HOH 10 104 25 HOH HOH B . H 3 HOH 11 105 26 HOH HOH B . H 3 HOH 12 106 34 HOH HOH B . H 3 HOH 13 107 35 HOH HOH B . H 3 HOH 14 108 39 HOH HOH B . H 3 HOH 15 109 44 HOH HOH B . H 3 HOH 16 110 54 HOH HOH B . H 3 HOH 17 111 56 HOH HOH B . H 3 HOH 18 112 59 HOH HOH B . H 3 HOH 19 113 70 HOH HOH B . H 3 HOH 20 114 74 HOH HOH B . H 3 HOH 21 115 85 HOH HOH B . H 3 HOH 22 116 87 HOH HOH B . H 3 HOH 23 117 96 HOH HOH B . H 3 HOH 24 118 99 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-05-13 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Refinement description' 4 3 'Structure model' 'Version format compliance' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_ncs_dom_lim # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 4 4 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 19.2140 15.2371 88.7704 0.1868 0.5175 0.2113 0.0803 0.0128 0.0800 4.4402 3.2119 4.3348 0.1257 0.0837 0.2040 -0.1221 0.0179 0.1042 -1.1210 -0.1711 -0.0808 0.5365 0.1669 0.1138 'X-RAY DIFFRACTION' 2 ? refined 32.0480 28.3045 64.8618 0.0604 0.1519 0.1151 -0.0311 -0.0647 -0.0130 2.3716 7.1912 6.6672 -2.0081 -0.6650 -3.7770 0.1143 -0.2105 0.0963 -0.0642 0.0890 -0.1928 -0.3651 -0.1782 0.3405 'X-RAY DIFFRACTION' 3 ? refined 6.6169 13.3915 62.2819 0.1032 0.1447 0.1020 -0.0119 0.0138 0.0315 2.5142 4.2805 10.8624 -2.5451 -0.6479 3.9834 -0.1048 0.1531 -0.0483 -0.0151 -0.0653 0.0621 -0.2007 -0.0778 -0.0547 'X-RAY DIFFRACTION' 4 ? refined 22.0300 41.0978 70.8414 0.2810 0.2367 0.2414 -0.0360 0.0419 -0.1801 4.5763 8.7232 8.6714 -1.4454 -2.6599 0.2857 -0.0145 -0.0062 0.0206 -0.3976 0.5962 0.4825 0.8406 0.2479 -0.8986 'X-RAY DIFFRACTION' 5 ? refined 20.6171 21.2507 60.8879 0.2579 0.0711 0.1312 -0.0450 0.0009 -0.0525 4.3519 5.6616 -0.9205 1.9439 0.5927 -0.3558 -0.0980 -0.2495 0.3475 -0.1792 -0.3681 -0.8097 -0.1545 0.1948 -0.0655 'X-RAY DIFFRACTION' 6 ? refined 14.5611 -1.3294 64.0045 0.6124 0.2616 0.3302 -0.0246 -0.0126 0.1875 7.2716 9.7416 20.7696 -4.0158 6.9926 -3.9630 0.2660 -0.1019 -0.1640 -0.4629 -1.1317 -0.0239 -0.1767 1.4658 0.9843 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 1 A 52 ? . . . . ? 'X-RAY DIFFRACTION' 2 1 B 1 B 52 ? . . . . ? 'X-RAY DIFFRACTION' 3 1 A 77 A 92 ? . . . . ? 'X-RAY DIFFRACTION' 4 1 B 77 B 92 ? . . . . ? 'X-RAY DIFFRACTION' 5 2 A 53 A 76 ? . . . . ? 'X-RAY DIFFRACTION' 6 3 B 53 B 76 ? . . . . ? 'X-RAY DIFFRACTION' 7 4 C 1 C 5 ? . . . . ? 'X-RAY DIFFRACTION' 8 4 D 16 D 20 ? . . . . ? 'X-RAY DIFFRACTION' 9 5 C 6 C 15 ? . . . . ? 'X-RAY DIFFRACTION' 10 5 D 5 D 15 ? . . . . ? 'X-RAY DIFFRACTION' 11 6 C 16 C 20 ? . . . . ? 'X-RAY DIFFRACTION' 12 6 D 1 D 4 ? . . . . ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.24 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 CNS phasing . ? 4 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CA _pdbx_validate_rmsd_bond.auth_asym_id_1 B _pdbx_validate_rmsd_bond.auth_comp_id_1 LYS _pdbx_validate_rmsd_bond.auth_seq_id_1 19 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CB _pdbx_validate_rmsd_bond.auth_asym_id_2 B _pdbx_validate_rmsd_bond.auth_comp_id_2 LYS _pdbx_validate_rmsd_bond.auth_seq_id_2 19 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.385 _pdbx_validate_rmsd_bond.bond_target_value 1.535 _pdbx_validate_rmsd_bond.bond_deviation -0.150 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.022 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" C DT 1 ? ? "C1'" C DT 1 ? ? N1 C DT 1 ? ? 113.60 108.30 5.30 0.30 N 2 1 "O4'" C DG 2 ? ? "C1'" C DG 2 ? ? N9 C DG 2 ? ? 110.23 108.30 1.93 0.30 N 3 1 "O4'" C DC 3 ? ? "C1'" C DC 3 ? ? N1 C DC 3 ? ? 111.49 108.30 3.19 0.30 N 4 1 "O5'" C DA 4 ? ? "C5'" C DA 4 ? ? "C4'" C DA 4 ? ? 104.43 109.40 -4.97 0.80 N 5 1 "O4'" C DA 6 ? ? "C1'" C DA 6 ? ? N9 C DA 6 ? ? 103.67 108.00 -4.33 0.70 N 6 1 "O4'" C DC 8 ? ? "C1'" C DC 8 ? ? N1 C DC 8 ? ? 110.15 108.30 1.85 0.30 N 7 1 "O4'" C DA 9 ? ? "C1'" C DA 9 ? ? N9 C DA 9 ? ? 110.20 108.30 1.90 0.30 N 8 1 "O4'" C DT 13 ? ? "C1'" C DT 13 ? ? N1 C DT 13 ? ? 102.33 108.00 -5.67 0.70 N 9 1 "O4'" C DT 16 ? ? "C1'" C DT 16 ? ? N1 C DT 16 ? ? 103.74 108.00 -4.26 0.70 N 10 1 "O4'" C DG 17 ? ? "C1'" C DG 17 ? ? N9 C DG 17 ? ? 112.57 108.30 4.27 0.30 N 11 1 "O4'" D DT 1 ? ? "C1'" D DT 1 ? ? N1 D DT 1 ? ? 111.87 108.30 3.57 0.30 N 12 1 "O4'" D DG 2 ? ? "C1'" D DG 2 ? ? N9 D DG 2 ? ? 112.83 108.30 4.53 0.30 N 13 1 "O5'" D DA 4 ? ? "C5'" D DA 4 ? ? "C4'" D DA 4 ? ? 103.12 109.40 -6.28 0.80 N 14 1 "O4'" D DA 4 ? ? "C1'" D DA 4 ? ? N9 D DA 4 ? ? 112.93 108.30 4.63 0.30 N 15 1 "O4'" D DT 5 ? ? "C1'" D DT 5 ? ? N1 D DT 5 ? ? 102.67 108.00 -5.33 0.70 N 16 1 "O4'" D DT 7 ? ? "C1'" D DT 7 ? ? "C2'" D DT 7 ? ? 109.81 106.80 3.01 0.50 N 17 1 "O4'" D DC 8 ? ? "C1'" D DC 8 ? ? N1 D DC 8 ? ? 111.15 108.30 2.85 0.30 N 18 1 "C3'" D DA 9 ? ? "C2'" D DA 9 ? ? "C1'" D DA 9 ? ? 97.51 102.40 -4.89 0.80 N 19 1 "O4'" D DA 9 ? ? "C1'" D DA 9 ? ? N9 D DA 9 ? ? 111.35 108.30 3.05 0.30 N 20 1 C6 D DT 11 ? ? C5 D DT 11 ? ? C7 D DT 11 ? ? 119.27 122.90 -3.63 0.60 N 21 1 C5 D DT 13 ? ? C4 D DT 13 ? ? O4 D DT 13 ? ? 120.32 124.90 -4.58 0.70 N 22 1 "O4'" D DT 15 ? ? "C4'" D DT 15 ? ? "C3'" D DT 15 ? ? 101.86 104.50 -2.64 0.40 N 23 1 "O4'" D DG 17 ? ? "C1'" D DG 17 ? ? N9 D DG 17 ? ? 111.80 108.30 3.50 0.30 N 24 1 "C3'" D DC 21 ? ? "C2'" D DC 21 ? ? "C1'" D DC 21 ? ? 95.25 102.40 -7.15 0.80 N 25 1 "O4'" D DC 21 ? ? "C1'" D DC 21 ? ? N1 D DC 21 ? ? 113.38 108.30 5.08 0.30 N 26 1 CB A ASP 40 ? ? CG A ASP 40 ? ? OD2 A ASP 40 ? ? 123.98 118.30 5.68 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 15 ? ? 82.81 80.33 2 1 SER B 15 ? ? 72.01 70.77 3 1 GLN B 20 ? ? -66.78 -71.62 4 1 PHE B 47 ? ? -151.77 -63.46 5 1 ASN B 66 ? ? 58.96 17.05 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 C DC 20 ? "C5'" ? A DC 20 "C5'" 2 1 Y 1 C DC 20 ? "C4'" ? A DC 20 "C4'" 3 1 Y 1 C DC 20 ? "O4'" ? A DC 20 "O4'" 4 1 Y 1 C DC 20 ? "C3'" ? A DC 20 "C3'" 5 1 Y 1 C DC 20 ? "O3'" ? A DC 20 "O3'" 6 1 Y 1 C DC 20 ? "C2'" ? A DC 20 "C2'" 7 1 Y 1 C DC 20 ? "C1'" ? A DC 20 "C1'" 8 1 Y 1 C DC 20 ? N1 ? A DC 20 N1 9 1 Y 1 C DC 20 ? C2 ? A DC 20 C2 10 1 Y 1 C DC 20 ? O2 ? A DC 20 O2 11 1 Y 1 C DC 20 ? N3 ? A DC 20 N3 12 1 Y 1 C DC 20 ? C4 ? A DC 20 C4 13 1 Y 1 C DC 20 ? N4 ? A DC 20 N4 14 1 Y 1 C DC 20 ? C5 ? A DC 20 C5 15 1 Y 1 C DC 20 ? C6 ? A DC 20 C6 16 1 Y 0 B LYS 19 ? CB ? D LYS 19 CB 17 1 Y 0 B LYS 19 ? CG ? D LYS 19 CG 18 1 Y 0 B LYS 19 ? CD ? D LYS 19 CD 19 1 Y 0 B LYS 19 ? CE ? D LYS 19 CE 20 1 Y 0 B LYS 19 ? NZ ? D LYS 19 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 C DC 21 ? A DC 21 2 1 Y 1 A LYS 93 ? C LYS 93 3 1 Y 1 A ALA 94 ? C ALA 94 4 1 Y 1 B LYS 93 ? D LYS 93 5 1 Y 1 B ALA 94 ? D ALA 94 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DA OP3 O N N 74 DA P P N N 75 DA OP1 O N N 76 DA OP2 O N N 77 DA "O5'" O N N 78 DA "C5'" C N N 79 DA "C4'" C N R 80 DA "O4'" O N N 81 DA "C3'" C N S 82 DA "O3'" O N N 83 DA "C2'" C N N 84 DA "C1'" C N R 85 DA N9 N Y N 86 DA C8 C Y N 87 DA N7 N Y N 88 DA C5 C Y N 89 DA C6 C Y N 90 DA N6 N N N 91 DA N1 N Y N 92 DA C2 C Y N 93 DA N3 N Y N 94 DA C4 C Y N 95 DA HOP3 H N N 96 DA HOP2 H N N 97 DA "H5'" H N N 98 DA "H5''" H N N 99 DA "H4'" H N N 100 DA "H3'" H N N 101 DA "HO3'" H N N 102 DA "H2'" H N N 103 DA "H2''" H N N 104 DA "H1'" H N N 105 DA H8 H N N 106 DA H61 H N N 107 DA H62 H N N 108 DA H2 H N N 109 DC OP3 O N N 110 DC P P N N 111 DC OP1 O N N 112 DC OP2 O N N 113 DC "O5'" O N N 114 DC "C5'" C N N 115 DC "C4'" C N R 116 DC "O4'" O N N 117 DC "C3'" C N S 118 DC "O3'" O N N 119 DC "C2'" C N N 120 DC "C1'" C N R 121 DC N1 N N N 122 DC C2 C N N 123 DC O2 O N N 124 DC N3 N N N 125 DC C4 C N N 126 DC N4 N N N 127 DC C5 C N N 128 DC C6 C N N 129 DC HOP3 H N N 130 DC HOP2 H N N 131 DC "H5'" H N N 132 DC "H5''" H N N 133 DC "H4'" H N N 134 DC "H3'" H N N 135 DC "HO3'" H N N 136 DC "H2'" H N N 137 DC "H2''" H N N 138 DC "H1'" H N N 139 DC H41 H N N 140 DC H42 H N N 141 DC H5 H N N 142 DC H6 H N N 143 DG OP3 O N N 144 DG P P N N 145 DG OP1 O N N 146 DG OP2 O N N 147 DG "O5'" O N N 148 DG "C5'" C N N 149 DG "C4'" C N R 150 DG "O4'" O N N 151 DG "C3'" C N S 152 DG "O3'" O N N 153 DG "C2'" C N N 154 DG "C1'" C N R 155 DG N9 N Y N 156 DG C8 C Y N 157 DG N7 N Y N 158 DG C5 C Y N 159 DG C6 C N N 160 DG O6 O N N 161 DG N1 N N N 162 DG C2 C N N 163 DG N2 N N N 164 DG N3 N N N 165 DG C4 C Y N 166 DG HOP3 H N N 167 DG HOP2 H N N 168 DG "H5'" H N N 169 DG "H5''" H N N 170 DG "H4'" H N N 171 DG "H3'" H N N 172 DG "HO3'" H N N 173 DG "H2'" H N N 174 DG "H2''" H N N 175 DG "H1'" H N N 176 DG H8 H N N 177 DG H1 H N N 178 DG H21 H N N 179 DG H22 H N N 180 DT OP3 O N N 181 DT P P N N 182 DT OP1 O N N 183 DT OP2 O N N 184 DT "O5'" O N N 185 DT "C5'" C N N 186 DT "C4'" C N R 187 DT "O4'" O N N 188 DT "C3'" C N S 189 DT "O3'" O N N 190 DT "C2'" C N N 191 DT "C1'" C N R 192 DT N1 N N N 193 DT C2 C N N 194 DT O2 O N N 195 DT N3 N N N 196 DT C4 C N N 197 DT O4 O N N 198 DT C5 C N N 199 DT C7 C N N 200 DT C6 C N N 201 DT HOP3 H N N 202 DT HOP2 H N N 203 DT "H5'" H N N 204 DT "H5''" H N N 205 DT "H4'" H N N 206 DT "H3'" H N N 207 DT "HO3'" H N N 208 DT "H2'" H N N 209 DT "H2''" H N N 210 DT "H1'" H N N 211 DT H3 H N N 212 DT H71 H N N 213 DT H72 H N N 214 DT H73 H N N 215 DT H6 H N N 216 GLN N N N N 217 GLN CA C N S 218 GLN C C N N 219 GLN O O N N 220 GLN CB C N N 221 GLN CG C N N 222 GLN CD C N N 223 GLN OE1 O N N 224 GLN NE2 N N N 225 GLN OXT O N N 226 GLN H H N N 227 GLN H2 H N N 228 GLN HA H N N 229 GLN HB2 H N N 230 GLN HB3 H N N 231 GLN HG2 H N N 232 GLN HG3 H N N 233 GLN HE21 H N N 234 GLN HE22 H N N 235 GLN HXT H N N 236 GLU N N N N 237 GLU CA C N S 238 GLU C C N N 239 GLU O O N N 240 GLU CB C N N 241 GLU CG C N N 242 GLU CD C N N 243 GLU OE1 O N N 244 GLU OE2 O N N 245 GLU OXT O N N 246 GLU H H N N 247 GLU H2 H N N 248 GLU HA H N N 249 GLU HB2 H N N 250 GLU HB3 H N N 251 GLU HG2 H N N 252 GLU HG3 H N N 253 GLU HE2 H N N 254 GLU HXT H N N 255 GLY N N N N 256 GLY CA C N N 257 GLY C C N N 258 GLY O O N N 259 GLY OXT O N N 260 GLY H H N N 261 GLY H2 H N N 262 GLY HA2 H N N 263 GLY HA3 H N N 264 GLY HXT H N N 265 HOH O O N N 266 HOH H1 H N N 267 HOH H2 H N N 268 ILE N N N N 269 ILE CA C N S 270 ILE C C N N 271 ILE O O N N 272 ILE CB C N S 273 ILE CG1 C N N 274 ILE CG2 C N N 275 ILE CD1 C N N 276 ILE OXT O N N 277 ILE H H N N 278 ILE H2 H N N 279 ILE HA H N N 280 ILE HB H N N 281 ILE HG12 H N N 282 ILE HG13 H N N 283 ILE HG21 H N N 284 ILE HG22 H N N 285 ILE HG23 H N N 286 ILE HD11 H N N 287 ILE HD12 H N N 288 ILE HD13 H N N 289 ILE HXT H N N 290 LEU N N N N 291 LEU CA C N S 292 LEU C C N N 293 LEU O O N N 294 LEU CB C N N 295 LEU CG C N N 296 LEU CD1 C N N 297 LEU CD2 C N N 298 LEU OXT O N N 299 LEU H H N N 300 LEU H2 H N N 301 LEU HA H N N 302 LEU HB2 H N N 303 LEU HB3 H N N 304 LEU HG H N N 305 LEU HD11 H N N 306 LEU HD12 H N N 307 LEU HD13 H N N 308 LEU HD21 H N N 309 LEU HD22 H N N 310 LEU HD23 H N N 311 LEU HXT H N N 312 LYS N N N N 313 LYS CA C N S 314 LYS C C N N 315 LYS O O N N 316 LYS CB C N N 317 LYS CG C N N 318 LYS CD C N N 319 LYS CE C N N 320 LYS NZ N N N 321 LYS OXT O N N 322 LYS H H N N 323 LYS H2 H N N 324 LYS HA H N N 325 LYS HB2 H N N 326 LYS HB3 H N N 327 LYS HG2 H N N 328 LYS HG3 H N N 329 LYS HD2 H N N 330 LYS HD3 H N N 331 LYS HE2 H N N 332 LYS HE3 H N N 333 LYS HZ1 H N N 334 LYS HZ2 H N N 335 LYS HZ3 H N N 336 LYS HXT H N N 337 MET N N N N 338 MET CA C N S 339 MET C C N N 340 MET O O N N 341 MET CB C N N 342 MET CG C N N 343 MET SD S N N 344 MET CE C N N 345 MET OXT O N N 346 MET H H N N 347 MET H2 H N N 348 MET HA H N N 349 MET HB2 H N N 350 MET HB3 H N N 351 MET HG2 H N N 352 MET HG3 H N N 353 MET HE1 H N N 354 MET HE2 H N N 355 MET HE3 H N N 356 MET HXT H N N 357 PHE N N N N 358 PHE CA C N S 359 PHE C C N N 360 PHE O O N N 361 PHE CB C N N 362 PHE CG C Y N 363 PHE CD1 C Y N 364 PHE CD2 C Y N 365 PHE CE1 C Y N 366 PHE CE2 C Y N 367 PHE CZ C Y N 368 PHE OXT O N N 369 PHE H H N N 370 PHE H2 H N N 371 PHE HA H N N 372 PHE HB2 H N N 373 PHE HB3 H N N 374 PHE HD1 H N N 375 PHE HD2 H N N 376 PHE HE1 H N N 377 PHE HE2 H N N 378 PHE HZ H N N 379 PHE HXT H N N 380 PRO N N N N 381 PRO CA C N S 382 PRO C C N N 383 PRO O O N N 384 PRO CB C N N 385 PRO CG C N N 386 PRO CD C N N 387 PRO OXT O N N 388 PRO H H N N 389 PRO HA H N N 390 PRO HB2 H N N 391 PRO HB3 H N N 392 PRO HG2 H N N 393 PRO HG3 H N N 394 PRO HD2 H N N 395 PRO HD3 H N N 396 PRO HXT H N N 397 SER N N N N 398 SER CA C N S 399 SER C C N N 400 SER O O N N 401 SER CB C N N 402 SER OG O N N 403 SER OXT O N N 404 SER H H N N 405 SER H2 H N N 406 SER HA H N N 407 SER HB2 H N N 408 SER HB3 H N N 409 SER HG H N N 410 SER HXT H N N 411 THR N N N N 412 THR CA C N S 413 THR C C N N 414 THR O O N N 415 THR CB C N R 416 THR OG1 O N N 417 THR CG2 C N N 418 THR OXT O N N 419 THR H H N N 420 THR H2 H N N 421 THR HA H N N 422 THR HB H N N 423 THR HG1 H N N 424 THR HG21 H N N 425 THR HG22 H N N 426 THR HG23 H N N 427 THR HXT H N N 428 VAL N N N N 429 VAL CA C N S 430 VAL C C N N 431 VAL O O N N 432 VAL CB C N N 433 VAL CG1 C N N 434 VAL CG2 C N N 435 VAL OXT O N N 436 VAL H H N N 437 VAL H2 H N N 438 VAL HA H N N 439 VAL HB H N N 440 VAL HG11 H N N 441 VAL HG12 H N N 442 VAL HG13 H N N 443 VAL HG21 H N N 444 VAL HG22 H N N 445 VAL HG23 H N N 446 VAL HXT H N N 447 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DG OP3 P sing N N 143 DG OP3 HOP3 sing N N 144 DG P OP1 doub N N 145 DG P OP2 sing N N 146 DG P "O5'" sing N N 147 DG OP2 HOP2 sing N N 148 DG "O5'" "C5'" sing N N 149 DG "C5'" "C4'" sing N N 150 DG "C5'" "H5'" sing N N 151 DG "C5'" "H5''" sing N N 152 DG "C4'" "O4'" sing N N 153 DG "C4'" "C3'" sing N N 154 DG "C4'" "H4'" sing N N 155 DG "O4'" "C1'" sing N N 156 DG "C3'" "O3'" sing N N 157 DG "C3'" "C2'" sing N N 158 DG "C3'" "H3'" sing N N 159 DG "O3'" "HO3'" sing N N 160 DG "C2'" "C1'" sing N N 161 DG "C2'" "H2'" sing N N 162 DG "C2'" "H2''" sing N N 163 DG "C1'" N9 sing N N 164 DG "C1'" "H1'" sing N N 165 DG N9 C8 sing Y N 166 DG N9 C4 sing Y N 167 DG C8 N7 doub Y N 168 DG C8 H8 sing N N 169 DG N7 C5 sing Y N 170 DG C5 C6 sing N N 171 DG C5 C4 doub Y N 172 DG C6 O6 doub N N 173 DG C6 N1 sing N N 174 DG N1 C2 sing N N 175 DG N1 H1 sing N N 176 DG C2 N2 sing N N 177 DG C2 N3 doub N N 178 DG N2 H21 sing N N 179 DG N2 H22 sing N N 180 DG N3 C4 sing N N 181 DT OP3 P sing N N 182 DT OP3 HOP3 sing N N 183 DT P OP1 doub N N 184 DT P OP2 sing N N 185 DT P "O5'" sing N N 186 DT OP2 HOP2 sing N N 187 DT "O5'" "C5'" sing N N 188 DT "C5'" "C4'" sing N N 189 DT "C5'" "H5'" sing N N 190 DT "C5'" "H5''" sing N N 191 DT "C4'" "O4'" sing N N 192 DT "C4'" "C3'" sing N N 193 DT "C4'" "H4'" sing N N 194 DT "O4'" "C1'" sing N N 195 DT "C3'" "O3'" sing N N 196 DT "C3'" "C2'" sing N N 197 DT "C3'" "H3'" sing N N 198 DT "O3'" "HO3'" sing N N 199 DT "C2'" "C1'" sing N N 200 DT "C2'" "H2'" sing N N 201 DT "C2'" "H2''" sing N N 202 DT "C1'" N1 sing N N 203 DT "C1'" "H1'" sing N N 204 DT N1 C2 sing N N 205 DT N1 C6 sing N N 206 DT C2 O2 doub N N 207 DT C2 N3 sing N N 208 DT N3 C4 sing N N 209 DT N3 H3 sing N N 210 DT C4 O4 doub N N 211 DT C4 C5 sing N N 212 DT C5 C7 sing N N 213 DT C5 C6 doub N N 214 DT C7 H71 sing N N 215 DT C7 H72 sing N N 216 DT C7 H73 sing N N 217 DT C6 H6 sing N N 218 GLN N CA sing N N 219 GLN N H sing N N 220 GLN N H2 sing N N 221 GLN CA C sing N N 222 GLN CA CB sing N N 223 GLN CA HA sing N N 224 GLN C O doub N N 225 GLN C OXT sing N N 226 GLN CB CG sing N N 227 GLN CB HB2 sing N N 228 GLN CB HB3 sing N N 229 GLN CG CD sing N N 230 GLN CG HG2 sing N N 231 GLN CG HG3 sing N N 232 GLN CD OE1 doub N N 233 GLN CD NE2 sing N N 234 GLN NE2 HE21 sing N N 235 GLN NE2 HE22 sing N N 236 GLN OXT HXT sing N N 237 GLU N CA sing N N 238 GLU N H sing N N 239 GLU N H2 sing N N 240 GLU CA C sing N N 241 GLU CA CB sing N N 242 GLU CA HA sing N N 243 GLU C O doub N N 244 GLU C OXT sing N N 245 GLU CB CG sing N N 246 GLU CB HB2 sing N N 247 GLU CB HB3 sing N N 248 GLU CG CD sing N N 249 GLU CG HG2 sing N N 250 GLU CG HG3 sing N N 251 GLU CD OE1 doub N N 252 GLU CD OE2 sing N N 253 GLU OE2 HE2 sing N N 254 GLU OXT HXT sing N N 255 GLY N CA sing N N 256 GLY N H sing N N 257 GLY N H2 sing N N 258 GLY CA C sing N N 259 GLY CA HA2 sing N N 260 GLY CA HA3 sing N N 261 GLY C O doub N N 262 GLY C OXT sing N N 263 GLY OXT HXT sing N N 264 HOH O H1 sing N N 265 HOH O H2 sing N N 266 ILE N CA sing N N 267 ILE N H sing N N 268 ILE N H2 sing N N 269 ILE CA C sing N N 270 ILE CA CB sing N N 271 ILE CA HA sing N N 272 ILE C O doub N N 273 ILE C OXT sing N N 274 ILE CB CG1 sing N N 275 ILE CB CG2 sing N N 276 ILE CB HB sing N N 277 ILE CG1 CD1 sing N N 278 ILE CG1 HG12 sing N N 279 ILE CG1 HG13 sing N N 280 ILE CG2 HG21 sing N N 281 ILE CG2 HG22 sing N N 282 ILE CG2 HG23 sing N N 283 ILE CD1 HD11 sing N N 284 ILE CD1 HD12 sing N N 285 ILE CD1 HD13 sing N N 286 ILE OXT HXT sing N N 287 LEU N CA sing N N 288 LEU N H sing N N 289 LEU N H2 sing N N 290 LEU CA C sing N N 291 LEU CA CB sing N N 292 LEU CA HA sing N N 293 LEU C O doub N N 294 LEU C OXT sing N N 295 LEU CB CG sing N N 296 LEU CB HB2 sing N N 297 LEU CB HB3 sing N N 298 LEU CG CD1 sing N N 299 LEU CG CD2 sing N N 300 LEU CG HG sing N N 301 LEU CD1 HD11 sing N N 302 LEU CD1 HD12 sing N N 303 LEU CD1 HD13 sing N N 304 LEU CD2 HD21 sing N N 305 LEU CD2 HD22 sing N N 306 LEU CD2 HD23 sing N N 307 LEU OXT HXT sing N N 308 LYS N CA sing N N 309 LYS N H sing N N 310 LYS N H2 sing N N 311 LYS CA C sing N N 312 LYS CA CB sing N N 313 LYS CA HA sing N N 314 LYS C O doub N N 315 LYS C OXT sing N N 316 LYS CB CG sing N N 317 LYS CB HB2 sing N N 318 LYS CB HB3 sing N N 319 LYS CG CD sing N N 320 LYS CG HG2 sing N N 321 LYS CG HG3 sing N N 322 LYS CD CE sing N N 323 LYS CD HD2 sing N N 324 LYS CD HD3 sing N N 325 LYS CE NZ sing N N 326 LYS CE HE2 sing N N 327 LYS CE HE3 sing N N 328 LYS NZ HZ1 sing N N 329 LYS NZ HZ2 sing N N 330 LYS NZ HZ3 sing N N 331 LYS OXT HXT sing N N 332 MET N CA sing N N 333 MET N H sing N N 334 MET N H2 sing N N 335 MET CA C sing N N 336 MET CA CB sing N N 337 MET CA HA sing N N 338 MET C O doub N N 339 MET C OXT sing N N 340 MET CB CG sing N N 341 MET CB HB2 sing N N 342 MET CB HB3 sing N N 343 MET CG SD sing N N 344 MET CG HG2 sing N N 345 MET CG HG3 sing N N 346 MET SD CE sing N N 347 MET CE HE1 sing N N 348 MET CE HE2 sing N N 349 MET CE HE3 sing N N 350 MET OXT HXT sing N N 351 PHE N CA sing N N 352 PHE N H sing N N 353 PHE N H2 sing N N 354 PHE CA C sing N N 355 PHE CA CB sing N N 356 PHE CA HA sing N N 357 PHE C O doub N N 358 PHE C OXT sing N N 359 PHE CB CG sing N N 360 PHE CB HB2 sing N N 361 PHE CB HB3 sing N N 362 PHE CG CD1 doub Y N 363 PHE CG CD2 sing Y N 364 PHE CD1 CE1 sing Y N 365 PHE CD1 HD1 sing N N 366 PHE CD2 CE2 doub Y N 367 PHE CD2 HD2 sing N N 368 PHE CE1 CZ doub Y N 369 PHE CE1 HE1 sing N N 370 PHE CE2 CZ sing Y N 371 PHE CE2 HE2 sing N N 372 PHE CZ HZ sing N N 373 PHE OXT HXT sing N N 374 PRO N CA sing N N 375 PRO N CD sing N N 376 PRO N H sing N N 377 PRO CA C sing N N 378 PRO CA CB sing N N 379 PRO CA HA sing N N 380 PRO C O doub N N 381 PRO C OXT sing N N 382 PRO CB CG sing N N 383 PRO CB HB2 sing N N 384 PRO CB HB3 sing N N 385 PRO CG CD sing N N 386 PRO CG HG2 sing N N 387 PRO CG HG3 sing N N 388 PRO CD HD2 sing N N 389 PRO CD HD3 sing N N 390 PRO OXT HXT sing N N 391 SER N CA sing N N 392 SER N H sing N N 393 SER N H2 sing N N 394 SER CA C sing N N 395 SER CA CB sing N N 396 SER CA HA sing N N 397 SER C O doub N N 398 SER C OXT sing N N 399 SER CB OG sing N N 400 SER CB HB2 sing N N 401 SER CB HB3 sing N N 402 SER OG HG sing N N 403 SER OXT HXT sing N N 404 THR N CA sing N N 405 THR N H sing N N 406 THR N H2 sing N N 407 THR CA C sing N N 408 THR CA CB sing N N 409 THR CA HA sing N N 410 THR C O doub N N 411 THR C OXT sing N N 412 THR CB OG1 sing N N 413 THR CB CG2 sing N N 414 THR CB HB sing N N 415 THR OG1 HG1 sing N N 416 THR CG2 HG21 sing N N 417 THR CG2 HG22 sing N N 418 THR CG2 HG23 sing N N 419 THR OXT HXT sing N N 420 VAL N CA sing N N 421 VAL N H sing N N 422 VAL N H2 sing N N 423 VAL CA C sing N N 424 VAL CA CB sing N N 425 VAL CA HA sing N N 426 VAL C O doub N N 427 VAL C OXT sing N N 428 VAL CB CG1 sing N N 429 VAL CB CG2 sing N N 430 VAL CB HB sing N N 431 VAL CG1 HG11 sing N N 432 VAL CG1 HG12 sing N N 433 VAL CG1 HG13 sing N N 434 VAL CG2 HG21 sing N N 435 VAL CG2 HG22 sing N N 436 VAL CG2 HG23 sing N N 437 VAL OXT HXT sing N N 438 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1P78 'double helix' 1P78 'b-form double helix' 1P78 'mismatched base pair' 1P78 'internal loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DT 1 1_555 B DA 19 1_555 0.077 -0.224 0.215 -16.948 -13.663 7.661 1 C_DT1:DA19_D C 1 ? D 19 ? 20 1 1 A DG 2 1_555 B DC 18 1_555 -0.201 -0.173 0.162 -11.517 -3.737 0.688 2 C_DG2:DC18_D C 2 ? D 18 ? 19 1 1 A DC 3 1_555 B DG 17 1_555 0.073 -0.155 -0.348 3.767 6.964 -0.854 3 C_DC3:DG17_D C 3 ? D 17 ? 19 1 1 A DA 4 1_555 B DT 16 1_555 0.202 -0.169 0.061 23.583 -0.398 2.847 4 C_DA4:DT16_D C 4 ? D 16 ? 20 1 1 A DA 6 1_555 B DT 15 1_555 0.326 -0.182 -0.483 -27.885 2.429 0.593 5 C_DA6:DT15_D C 6 ? D 15 ? 20 1 1 A DC 8 1_555 B DG 14 1_555 0.333 -0.203 0.126 -10.875 4.788 2.038 6 C_DC8:DG14_D C 8 ? D 14 ? 19 1 1 A DA 9 1_555 B DT 13 1_555 0.070 -0.195 0.022 14.546 -3.625 1.649 7 C_DA9:DT13_D C 9 ? D 13 ? 20 1 1 A DA 10 1_555 B DT 12 1_555 0.057 -0.097 -0.040 13.604 -21.371 9.237 8 C_DA10:DT12_D C 10 ? D 12 ? 20 1 1 A DT 11 1_555 B DT 11 1_555 2.117 -2.086 0.193 -2.909 -20.562 9.952 9 C_DT11:DT11_D C 11 ? D 11 ? 16 1 1 A DT 12 1_555 B DA 10 1_555 0.269 -0.265 0.015 -6.038 -12.461 10.405 10 C_DT12:DA10_D C 12 ? D 10 ? 20 1 1 A DT 13 1_555 B DA 9 1_555 -0.109 -0.252 -0.321 -8.958 -4.451 3.794 11 C_DT13:DA9_D C 13 ? D 9 ? 20 1 1 A DG 14 1_555 B DC 8 1_555 -0.345 -0.236 0.184 15.458 1.286 -2.804 12 C_DG14:DC8_D C 14 ? D 8 ? 19 1 1 A DT 15 1_555 B DA 6 1_555 -0.233 -0.108 -0.616 35.369 6.062 -0.017 13 C_DT15:DA6_D C 15 ? D 6 ? 20 1 1 A DT 16 1_555 B DA 4 1_555 -0.281 -0.266 0.156 -26.517 6.890 7.207 14 C_DT16:DA4_D C 16 ? D 4 ? 20 1 1 A DG 17 1_555 B DC 3 1_555 -0.364 -0.226 0.118 -0.535 1.268 4.040 15 C_DG17:DC3_D C 17 ? D 3 ? 19 1 1 A DC 18 1_555 B DG 2 1_555 0.372 -0.166 -0.344 13.152 -10.830 -0.918 16 C_DC18:DG2_D C 18 ? D 2 ? 19 1 1 A DA 19 1_555 B DT 1 1_555 0.781 -0.346 0.097 2.141 -10.371 -8.878 17 C_DA19:DT1_D C 19 ? D 1 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DT 1 1_555 B DA 19 1_555 A DG 2 1_555 B DC 18 1_555 0.037 -0.131 3.108 1.470 9.765 32.425 -1.714 0.160 2.945 17.001 -2.559 33.857 1 CC_DT1DG2:DC18DA19_DD C 1 ? D 19 ? C 2 ? D 18 ? 1 A DG 2 1_555 B DC 18 1_555 A DC 3 1_555 B DG 17 1_555 0.899 -0.044 2.951 4.212 -0.122 34.583 -0.056 -0.913 3.037 -0.204 -7.052 34.831 2 CC_DG2DC3:DG17DC18_DD C 2 ? D 18 ? C 3 ? D 17 ? 1 A DC 3 1_555 B DG 17 1_555 A DA 4 1_555 B DT 16 1_555 -0.231 -0.227 3.054 -1.401 1.365 25.300 -0.884 0.149 3.046 3.111 3.192 25.374 3 CC_DC3DA4:DT16DG17_DD C 3 ? D 17 ? C 4 ? D 16 ? 1 A DA 6 1_555 B DT 15 1_555 A DC 8 1_555 B DG 14 1_555 0.864 -0.138 2.965 -5.758 4.836 19.725 -2.131 -4.448 2.509 13.500 16.073 21.097 4 CC_DA6DC8:DG14DT15_DD C 6 ? D 15 ? C 8 ? D 14 ? 1 A DC 8 1_555 B DG 14 1_555 A DA 9 1_555 B DT 13 1_555 -0.253 -0.005 2.847 3.974 2.261 27.767 -0.469 1.325 2.775 4.671 -8.210 28.133 5 CC_DC8DA9:DT13DG14_DD C 8 ? D 14 ? C 9 ? D 13 ? 1 A DA 9 1_555 B DT 13 1_555 A DA 10 1_555 B DT 12 1_555 -0.170 0.615 3.463 0.626 10.687 34.497 -0.654 0.372 3.490 17.506 -1.025 36.072 6 CC_DA9DA10:DT12DT13_DD C 9 ? D 13 ? C 10 ? D 12 ? 1 A DA 10 1_555 B DT 12 1_555 A DT 11 1_555 B DT 11 1_555 0.321 -0.317 3.848 -3.419 6.431 44.813 -1.076 -0.770 3.737 8.370 4.450 45.371 7 CC_DA10DT11:DT11DT12_DD C 10 ? D 12 ? C 11 ? D 11 ? 1 A DT 11 1_555 B DT 11 1_555 A DT 12 1_555 B DA 10 1_555 -0.657 -1.527 3.335 3.647 7.704 25.795 -5.080 2.265 2.659 16.686 -7.899 27.144 8 CC_DT11DT12:DA10DT11_DD C 11 ? D 11 ? C 12 ? D 10 ? 1 A DT 12 1_555 B DA 10 1_555 A DT 13 1_555 B DA 9 1_555 0.123 0.130 3.428 5.403 2.868 32.206 -0.290 0.761 3.402 5.113 -9.630 32.766 9 CC_DT12DT13:DA9DA10_DD C 12 ? D 10 ? C 13 ? D 9 ? 1 A DT 13 1_555 B DA 9 1_555 A DG 14 1_555 B DC 8 1_555 -0.035 0.407 2.938 -6.248 4.177 29.722 0.022 -1.055 2.913 7.983 11.942 30.636 10 CC_DT13DG14:DC8DA9_DD C 13 ? D 9 ? C 14 ? D 8 ? 1 A DG 14 1_555 B DC 8 1_555 A DT 15 1_555 B DA 6 1_555 -0.488 -0.130 2.950 6.516 5.980 17.958 -2.805 4.053 2.455 17.821 -19.420 20.002 11 CC_DG14DT15:DA6DC8_DD C 14 ? D 8 ? C 15 ? D 6 ? 1 A DT 16 1_555 B DA 4 1_555 A DG 17 1_555 B DC 3 1_555 -0.203 0.412 2.815 -2.042 7.464 17.169 -2.246 -0.337 2.754 23.511 6.432 18.821 12 CC_DT16DG17:DC3DA4_DD C 16 ? D 4 ? C 17 ? D 3 ? 1 A DG 17 1_555 B DC 3 1_555 A DC 18 1_555 B DG 2 1_555 -0.247 0.052 3.045 1.193 6.141 32.289 -0.886 0.627 2.993 10.914 -2.121 32.874 13 CC_DG17DC18:DG2DC3_DD C 17 ? D 3 ? C 18 ? D 2 ? 1 A DC 18 1_555 B DG 2 1_555 A DA 19 1_555 B DT 1 1_555 -0.863 -0.916 3.703 -5.656 12.821 36.549 -3.085 0.535 3.304 19.582 8.638 39.057 14 CC_DC18DA19:DT1DG2_DD C 18 ? D 2 ? C 19 ? D 1 ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1P71 _pdbx_initial_refinement_model.details 'PDB ENTRY 1P71' #