data_1P7D # _entry.id 1P7D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1P7D NDB PD0428 RCSB RCSB019099 WWPDB D_1000019099 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1P7D _pdbx_database_status.recvd_initial_deposition_date 2003-05-01 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Aihara, H.' 1 'Kwon, H.J.' 2 'Nunes-Duby, S.E.' 3 'Landy, A.' 4 'Ellenberger, T.' 5 # _citation.id primary _citation.title 'A Conformational Switch Controls the DNA Cleavage Activity of Lambda Integrase' _citation.journal_abbrev Mol.Cell _citation.journal_volume 12 _citation.page_first 187 _citation.page_last 198 _citation.year 2003 _citation.journal_id_ASTM MOCEFL _citation.country US _citation.journal_id_ISSN 1097-2765 _citation.journal_id_CSD 2168 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12887904 _citation.pdbx_database_id_DOI '10.1016/S1097-2765(03)00268-5' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Aihara, H.' 1 primary 'Kwon, H.J.' 2 primary 'Nunes-Duby, S.E.' 3 primary 'Landy, A.' 4 primary 'Ellenberger, T.' 5 # _cell.entry_id 1P7D _cell.length_a 59.021 _cell.length_b 106.161 _cell.length_c 73.165 _cell.angle_alpha 90.00 _cell.angle_beta 92.10 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1P7D _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*CP*AP*AP*TP*GP*CP*CP*AP*AP*CP*TP*TP*T)-3'" 3910.573 2 ? ? ? ? 2 polymer syn 26-MER 8075.239 2 ? ? ? ? 3 polymer man Integrase 31914.553 2 ? ? 'Residues 75-356' ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DC)(DA)(DA)(DT)(DG)(DC)(DC)(DA)(DA)(DC)(DT)(DT)(DT)' CAATGCCAACTTT C,E ? 2 polydeoxyribonucleotide no no ;(DT)(DT)(DT)(DG)(DC)(DG)(DA)(DA)(DG)(DC)(DA)(DA)(DA)(DA)(DA)(DA)(DG)(DT)(DT)(DG) (DG)(DC)(DA)(DT)(DT)(DG) ; TTTGCGAAGCAAAAAAGTTGGCATTG D,F ? 3 'polypeptide(L)' no yes ;MTLHSWLDRYEKILASRGIKQKTLINYMSKIKAIRRGLPDAPLEDITTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFRE AIAEGHITTNHVAATRAAKSEVRRSRLTADEYLKIYQAAESSPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQ SKTGVKIAIPTALHIDALGISMKETLDKCKEILGGETIIASTRREPLSSGTVSRYFMRARKASGLSFEGDPPTFHELRSL SARLYEKQISDKFAQHLLGHKSDTMASQ(PTR)RDDRGREWDKIEIK ; ;MTLHSWLDRYEKILASRGIKQKTLINYMSKIKAIRRGLPDAPLEDITTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFRE AIAEGHITTNHVAATRAAKSEVRRSRLTADEYLKIYQAAESSPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQ SKTGVKIAIPTALHIDALGISMKETLDKCKEILGGETIIASTRREPLSSGTVSRYFMRARKASGLSFEGDPPTFHELRSL SARLYEKQISDKFAQHLLGHKSDTMASQYRDDRGREWDKIEIK ; A,B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DA n 1 3 DA n 1 4 DT n 1 5 DG n 1 6 DC n 1 7 DC n 1 8 DA n 1 9 DA n 1 10 DC n 1 11 DT n 1 12 DT n 1 13 DT n 2 1 DT n 2 2 DT n 2 3 DT n 2 4 DG n 2 5 DC n 2 6 DG n 2 7 DA n 2 8 DA n 2 9 DG n 2 10 DC n 2 11 DA n 2 12 DA n 2 13 DA n 2 14 DA n 2 15 DA n 2 16 DA n 2 17 DG n 2 18 DT n 2 19 DT n 2 20 DG n 2 21 DG n 2 22 DC n 2 23 DA n 2 24 DT n 2 25 DT n 2 26 DG n 3 1 MET n 3 2 THR n 3 3 LEU n 3 4 HIS n 3 5 SER n 3 6 TRP n 3 7 LEU n 3 8 ASP n 3 9 ARG n 3 10 TYR n 3 11 GLU n 3 12 LYS n 3 13 ILE n 3 14 LEU n 3 15 ALA n 3 16 SER n 3 17 ARG n 3 18 GLY n 3 19 ILE n 3 20 LYS n 3 21 GLN n 3 22 LYS n 3 23 THR n 3 24 LEU n 3 25 ILE n 3 26 ASN n 3 27 TYR n 3 28 MET n 3 29 SER n 3 30 LYS n 3 31 ILE n 3 32 LYS n 3 33 ALA n 3 34 ILE n 3 35 ARG n 3 36 ARG n 3 37 GLY n 3 38 LEU n 3 39 PRO n 3 40 ASP n 3 41 ALA n 3 42 PRO n 3 43 LEU n 3 44 GLU n 3 45 ASP n 3 46 ILE n 3 47 THR n 3 48 THR n 3 49 LYS n 3 50 GLU n 3 51 ILE n 3 52 ALA n 3 53 ALA n 3 54 MET n 3 55 LEU n 3 56 ASN n 3 57 GLY n 3 58 TYR n 3 59 ILE n 3 60 ASP n 3 61 GLU n 3 62 GLY n 3 63 LYS n 3 64 ALA n 3 65 ALA n 3 66 SER n 3 67 ALA n 3 68 LYS n 3 69 LEU n 3 70 ILE n 3 71 ARG n 3 72 SER n 3 73 THR n 3 74 LEU n 3 75 SER n 3 76 ASP n 3 77 ALA n 3 78 PHE n 3 79 ARG n 3 80 GLU n 3 81 ALA n 3 82 ILE n 3 83 ALA n 3 84 GLU n 3 85 GLY n 3 86 HIS n 3 87 ILE n 3 88 THR n 3 89 THR n 3 90 ASN n 3 91 HIS n 3 92 VAL n 3 93 ALA n 3 94 ALA n 3 95 THR n 3 96 ARG n 3 97 ALA n 3 98 ALA n 3 99 LYS n 3 100 SER n 3 101 GLU n 3 102 VAL n 3 103 ARG n 3 104 ARG n 3 105 SER n 3 106 ARG n 3 107 LEU n 3 108 THR n 3 109 ALA n 3 110 ASP n 3 111 GLU n 3 112 TYR n 3 113 LEU n 3 114 LYS n 3 115 ILE n 3 116 TYR n 3 117 GLN n 3 118 ALA n 3 119 ALA n 3 120 GLU n 3 121 SER n 3 122 SER n 3 123 PRO n 3 124 CYS n 3 125 TRP n 3 126 LEU n 3 127 ARG n 3 128 LEU n 3 129 ALA n 3 130 MET n 3 131 GLU n 3 132 LEU n 3 133 ALA n 3 134 VAL n 3 135 VAL n 3 136 THR n 3 137 GLY n 3 138 GLN n 3 139 ARG n 3 140 VAL n 3 141 GLY n 3 142 ASP n 3 143 LEU n 3 144 CYS n 3 145 GLU n 3 146 MET n 3 147 LYS n 3 148 TRP n 3 149 SER n 3 150 ASP n 3 151 ILE n 3 152 VAL n 3 153 ASP n 3 154 GLY n 3 155 TYR n 3 156 LEU n 3 157 TYR n 3 158 VAL n 3 159 GLU n 3 160 GLN n 3 161 SER n 3 162 LYS n 3 163 THR n 3 164 GLY n 3 165 VAL n 3 166 LYS n 3 167 ILE n 3 168 ALA n 3 169 ILE n 3 170 PRO n 3 171 THR n 3 172 ALA n 3 173 LEU n 3 174 HIS n 3 175 ILE n 3 176 ASP n 3 177 ALA n 3 178 LEU n 3 179 GLY n 3 180 ILE n 3 181 SER n 3 182 MET n 3 183 LYS n 3 184 GLU n 3 185 THR n 3 186 LEU n 3 187 ASP n 3 188 LYS n 3 189 CYS n 3 190 LYS n 3 191 GLU n 3 192 ILE n 3 193 LEU n 3 194 GLY n 3 195 GLY n 3 196 GLU n 3 197 THR n 3 198 ILE n 3 199 ILE n 3 200 ALA n 3 201 SER n 3 202 THR n 3 203 ARG n 3 204 ARG n 3 205 GLU n 3 206 PRO n 3 207 LEU n 3 208 SER n 3 209 SER n 3 210 GLY n 3 211 THR n 3 212 VAL n 3 213 SER n 3 214 ARG n 3 215 TYR n 3 216 PHE n 3 217 MET n 3 218 ARG n 3 219 ALA n 3 220 ARG n 3 221 LYS n 3 222 ALA n 3 223 SER n 3 224 GLY n 3 225 LEU n 3 226 SER n 3 227 PHE n 3 228 GLU n 3 229 GLY n 3 230 ASP n 3 231 PRO n 3 232 PRO n 3 233 THR n 3 234 PHE n 3 235 HIS n 3 236 GLU n 3 237 LEU n 3 238 ARG n 3 239 SER n 3 240 LEU n 3 241 SER n 3 242 ALA n 3 243 ARG n 3 244 LEU n 3 245 TYR n 3 246 GLU n 3 247 LYS n 3 248 GLN n 3 249 ILE n 3 250 SER n 3 251 ASP n 3 252 LYS n 3 253 PHE n 3 254 ALA n 3 255 GLN n 3 256 HIS n 3 257 LEU n 3 258 LEU n 3 259 GLY n 3 260 HIS n 3 261 LYS n 3 262 SER n 3 263 ASP n 3 264 THR n 3 265 MET n 3 266 ALA n 3 267 SER n 3 268 GLN n 3 269 PTR n 3 270 ARG n 3 271 ASP n 3 272 ASP n 3 273 ARG n 3 274 GLY n 3 275 ARG n 3 276 GLU n 3 277 TRP n 3 278 ASP n 3 279 LYS n 3 280 ILE n 3 281 GLU n 3 282 ILE n 3 283 LYS n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus 'Lambda-like viruses' _entity_src_gen.pdbx_gene_src_gene INT _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Enterobacteria phage lambda' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10710 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP VINT_LAMBD P03700 3 ;VTLHSWLDRYEKILASRGIKQKTLINYMSKIKAIRRGLPDAPLEDITTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFRE AIAEGHITTNHVAATRAAKSEVRRSRLTADEYLKIYQAAESSPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQ SKTGVKIAIPTALHIDALGISMKETLDKCKEILGGETIIASTRREPLSSGTVSRYFMRARKASGLSFEGDPPTFHELRSL SARLYEKQISDKFAQHLLGHKSDTMASQYRDDRGREWDKIEIK ; 74 ? 2 PDB 1P7D 1P7D 1 ? ? ? 3 PDB 1P7D 1P7D 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1P7D A 1 ? 283 ? P03700 74 ? 356 ? 74 356 2 1 1P7D B 1 ? 283 ? P03700 74 ? 356 ? 74 356 3 2 1P7D C 1 ? 13 ? 1P7D 1 ? 13 ? 1 13 4 3 1P7D D 1 ? 26 ? 1P7D 14 ? 39 ? 14 39 5 2 1P7D E 1 ? 13 ? 1P7D 1 ? 13 ? 1 13 6 3 1P7D F 1 ? 26 ? 1P7D 14 ? 39 ? 14 39 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1P7D MET A 1 ? UNP P03700 VAL 74 'SEE REMARK 999' 74 1 1 1P7D PTR A 269 ? UNP P03700 TYR 342 'MODIFIED RESIDUE' 342 2 2 1P7D MET B 1 ? UNP P03700 VAL 74 'SEE REMARK 999' 74 3 2 1P7D PTR B 269 ? UNP P03700 TYR 342 'MODIFIED RESIDUE' 342 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 PTR 'L-peptide linking' n O-PHOSPHOTYROSINE PHOSPHONOTYROSINE 'C9 H12 N O6 P' 261.168 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1P7D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.78 _exptl_crystal.density_percent_sol 55.42 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'PEG 8000, Ammonium Sulfate, Sodium Cacodylate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'PEG 8000' ? ? ? 1 2 1 'Ammonium Sulfate' ? ? ? 1 3 1 'Sodium Cacodylate' ? ? ? 1 4 1 H2O ? ? ? 1 5 2 'PEG 8000' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'BRANDEIS - B4' _diffrn_detector.pdbx_collection_date 2001-10-06 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.100 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X25' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X25 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.100 # _reflns.entry_id 1P7D _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I -3 _reflns.d_resolution_high 2.95 _reflns.d_resolution_low 50 _reflns.number_all 19010 _reflns.number_obs 19010 _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.07 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 18.8 _reflns.B_iso_Wilson_estimate 58.9 _reflns.pdbx_redundancy 3.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.95 _reflns_shell.d_res_low 3.06 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs 0.338 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.6 _reflns_shell.pdbx_redundancy 3.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1884 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1P7D _refine.ls_d_res_high 2.95 _refine.ls_d_res_low 50 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 19010 _refine.ls_number_reflns_obs 19010 _refine.ls_number_reflns_R_free 929 _refine.ls_percent_reflns_obs 99.7 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.231 _refine.ls_R_factor_R_free 0.259 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct MIR _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 4284 _refine_hist.pdbx_number_atoms_nucleic_acid 1600 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 5884 _refine_hist.d_res_high 2.95 _refine_hist.d_res_low 50 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.0067 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.29 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.187 1.5 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.991 2.0 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.087 2.0 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.304 2.5 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 2.95 _refine_ls_shell.d_res_low 3.01 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.4 _refine_ls_shell.percent_reflns_obs 99.9 _refine_ls_shell.R_factor_R_free 0.428 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 56 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 1P7D _struct.title 'Crystal structure of the Lambda Integrase (residues 75-356) bound to DNA' _struct.pdbx_descriptor 'Lambda Integrase/DNA Complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1P7D _struct_keywords.pdbx_keywords 'DNA Binding Protein/DNA' _struct_keywords.text 'PROTEIN-DNA COMPLEX, DNA Binding Protein-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 1 ? D N N 2 ? E N N 3 ? F N N 3 ? # loop_ _struct_biol.id _struct_biol.pdbx_parent_biol_id _struct_biol.details 1 ? ? 2 ? ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR E 2 ? ALA E 15 ? THR A 75 ALA A 88 1 ? 14 HELX_P HELX_P2 2 LYS E 20 ? LEU E 38 ? LYS A 93 LEU A 111 1 ? 19 HELX_P HELX_P3 3 THR E 47 ? GLU E 61 ? THR A 120 GLU A 134 1 ? 15 HELX_P HELX_P4 4 LYS E 63 ? GLU E 84 ? LYS A 136 GLU A 157 1 ? 22 HELX_P HELX_P5 5 THR E 108 ? ALA E 119 ? THR A 181 ALA A 192 1 ? 12 HELX_P HELX_P6 6 GLU E 120 ? SER E 122 ? GLU A 193 SER A 195 5 ? 3 HELX_P HELX_P7 7 PRO E 123 ? GLY E 137 ? PRO A 196 GLY A 210 1 ? 15 HELX_P HELX_P8 8 ARG E 139 ? CYS E 144 ? ARG A 212 CYS A 217 1 ? 6 HELX_P HELX_P9 9 LYS E 147 ? ILE E 151 ? LYS A 220 ILE A 224 5 ? 5 HELX_P HELX_P10 10 MET E 182 ? LEU E 193 ? MET A 255 LEU A 266 1 ? 12 HELX_P HELX_P11 11 SER E 208 ? GLY E 224 ? SER A 281 GLY A 297 1 ? 17 HELX_P HELX_P12 12 HIS E 235 ? ILE E 249 ? HIS A 308 ILE A 322 1 ? 15 HELX_P HELX_P13 13 SER E 250 ? GLY E 259 ? SER A 323 GLY A 332 1 ? 10 HELX_P HELX_P14 14 THR F 2 ? SER F 16 ? THR B 75 SER B 89 1 ? 15 HELX_P HELX_P15 15 LYS F 20 ? LEU F 38 ? LYS B 93 LEU B 111 1 ? 19 HELX_P HELX_P16 16 THR F 47 ? GLU F 61 ? THR B 120 GLU B 134 1 ? 15 HELX_P HELX_P17 17 LYS F 63 ? GLU F 84 ? LYS B 136 GLU B 157 1 ? 22 HELX_P HELX_P18 18 THR F 108 ? ALA F 119 ? THR B 181 ALA B 192 1 ? 12 HELX_P HELX_P19 19 GLU F 120 ? SER F 122 ? GLU B 193 SER B 195 5 ? 3 HELX_P HELX_P20 20 PRO F 123 ? GLY F 137 ? PRO B 196 GLY B 210 1 ? 15 HELX_P HELX_P21 21 ARG F 139 ? CYS F 144 ? ARG B 212 CYS B 217 1 ? 6 HELX_P HELX_P22 22 LYS F 147 ? ILE F 151 ? LYS B 220 ILE B 224 5 ? 5 HELX_P HELX_P23 23 MET F 182 ? LEU F 193 ? MET B 255 LEU B 266 1 ? 12 HELX_P HELX_P24 24 SER F 208 ? GLY F 224 ? SER B 281 GLY B 297 1 ? 17 HELX_P HELX_P25 25 HIS F 235 ? ILE F 249 ? HIS B 308 ILE B 322 1 ? 15 HELX_P HELX_P26 26 SER F 250 ? GLY F 259 ? SER B 323 GLY B 332 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A DT 13 "O3'" ? ? ? 1_555 E PTR 269 P ? ? C DT 13 A PTR 342 1_555 ? ? ? ? ? ? ? 1.614 ? covale2 covale ? ? C DT 13 "O3'" ? ? ? 1_555 F PTR 269 P ? ? E DT 13 B PTR 342 1_555 ? ? ? ? ? ? ? 1.596 ? covale3 covale ? ? E GLN 268 C ? ? ? 1_555 E PTR 269 N ? ? A GLN 341 A PTR 342 1_555 ? ? ? ? ? ? ? 1.332 ? covale4 covale ? ? E PTR 269 C ? ? ? 1_555 E ARG 270 N ? ? A PTR 342 A ARG 343 1_555 ? ? ? ? ? ? ? 1.326 ? covale5 covale ? ? F GLN 268 C ? ? ? 1_555 F PTR 269 N ? ? B GLN 341 B PTR 342 1_555 ? ? ? ? ? ? ? 1.331 ? covale6 covale ? ? F PTR 269 C ? ? ? 1_555 F ARG 270 N ? ? B PTR 342 B ARG 343 1_555 ? ? ? ? ? ? ? 1.331 ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 26 N1 ? ? C DC 1 D DG 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 26 O6 ? ? C DC 1 D DG 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 26 N2 ? ? C DC 1 D DG 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog4 hydrog ? ? A DA 2 N1 ? ? ? 1_555 B DT 25 N3 ? ? C DA 2 D DT 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog5 hydrog ? ? A DA 2 N6 ? ? ? 1_555 B DT 25 O4 ? ? C DA 2 D DT 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog6 hydrog ? ? A DA 3 N1 ? ? ? 1_555 B DT 24 N3 ? ? C DA 3 D DT 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog7 hydrog ? ? A DA 3 N6 ? ? ? 1_555 B DT 24 O4 ? ? C DA 3 D DT 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog8 hydrog ? ? A DT 4 N3 ? ? ? 1_555 B DA 23 N1 ? ? C DT 4 D DA 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog9 hydrog ? ? A DT 4 O4 ? ? ? 1_555 B DA 23 N6 ? ? C DT 4 D DA 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog10 hydrog ? ? A DG 5 N1 ? ? ? 1_555 B DC 22 N3 ? ? C DG 5 D DC 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog11 hydrog ? ? A DG 5 N2 ? ? ? 1_555 B DC 22 O2 ? ? C DG 5 D DC 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog12 hydrog ? ? A DG 5 O6 ? ? ? 1_555 B DC 22 N4 ? ? C DG 5 D DC 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog13 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 21 N1 ? ? C DC 6 D DG 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog14 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 21 O6 ? ? C DC 6 D DG 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog15 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 21 N2 ? ? C DC 6 D DG 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog16 hydrog ? ? A DC 7 N3 ? ? ? 1_555 B DG 20 N1 ? ? C DC 7 D DG 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog17 hydrog ? ? A DC 7 N4 ? ? ? 1_555 B DG 20 O6 ? ? C DC 7 D DG 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog18 hydrog ? ? A DC 7 O2 ? ? ? 1_555 B DG 20 N2 ? ? C DC 7 D DG 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog19 hydrog ? ? A DA 8 N1 ? ? ? 1_555 B DT 19 N3 ? ? C DA 8 D DT 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog20 hydrog ? ? A DA 8 N6 ? ? ? 1_555 B DT 19 O4 ? ? C DA 8 D DT 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog21 hydrog ? ? A DA 9 N1 ? ? ? 1_555 B DT 18 N3 ? ? C DA 9 D DT 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog22 hydrog ? ? A DA 9 N6 ? ? ? 1_555 B DT 18 O4 ? ? C DA 9 D DT 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog23 hydrog ? ? A DC 10 N3 ? ? ? 1_555 B DG 17 N1 ? ? C DC 10 D DG 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog24 hydrog ? ? A DC 10 N4 ? ? ? 1_555 B DG 17 O6 ? ? C DC 10 D DG 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog25 hydrog ? ? A DC 10 O2 ? ? ? 1_555 B DG 17 N2 ? ? C DC 10 D DG 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog26 hydrog ? ? A DT 11 N3 ? ? ? 1_555 B DA 16 N1 ? ? C DT 11 D DA 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog27 hydrog ? ? A DT 11 O4 ? ? ? 1_555 B DA 16 N6 ? ? C DT 11 D DA 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog28 hydrog ? ? A DT 12 N3 ? ? ? 1_555 B DA 15 N1 ? ? C DT 12 D DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog29 hydrog ? ? A DT 12 O4 ? ? ? 1_555 B DA 15 N6 ? ? C DT 12 D DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog30 hydrog ? ? A DT 13 N3 ? ? ? 1_555 B DA 14 N1 ? ? C DT 13 D DA 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog31 hydrog ? ? A DT 13 O4 ? ? ? 1_555 B DA 14 N6 ? ? C DT 13 D DA 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog32 hydrog ? ? B DT 1 N3 ? ? ? 1_555 B DA 13 N1 ? ? D DT 14 D DA 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog33 hydrog ? ? B DT 1 O4 ? ? ? 1_555 B DA 13 N6 ? ? D DT 14 D DA 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog34 hydrog ? ? B DT 2 N3 ? ? ? 1_555 B DA 12 N1 ? ? D DT 15 D DA 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog35 hydrog ? ? B DT 2 O4 ? ? ? 1_555 B DA 12 N6 ? ? D DT 15 D DA 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog36 hydrog ? ? B DT 3 N3 ? ? ? 1_555 B DA 11 N1 ? ? D DT 16 D DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog37 hydrog ? ? B DT 3 O4 ? ? ? 1_555 B DA 11 N6 ? ? D DT 16 D DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog38 hydrog ? ? B DG 4 N1 ? ? ? 1_555 B DC 10 N3 ? ? D DG 17 D DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog39 hydrog ? ? B DG 4 N2 ? ? ? 1_555 B DC 10 O2 ? ? D DG 17 D DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog40 hydrog ? ? B DG 4 O6 ? ? ? 1_555 B DC 10 N4 ? ? D DG 17 D DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog41 hydrog ? ? B DC 5 N3 ? ? ? 1_555 B DG 9 N1 ? ? D DC 18 D DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog42 hydrog ? ? B DC 5 N4 ? ? ? 1_555 B DG 9 O6 ? ? D DC 18 D DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog43 hydrog ? ? B DC 5 O2 ? ? ? 1_555 B DG 9 N2 ? ? D DC 18 D DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog44 hydrog ? ? B DG 6 N3 ? ? ? 1_555 B DA 8 N6 ? ? D DG 19 D DA 21 1_555 ? ? ? ? ? ? 'DG-DA MISPAIR' ? ? hydrog45 hydrog ? ? C DC 1 N3 ? ? ? 1_555 D DG 26 N1 ? ? E DC 1 F DG 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog46 hydrog ? ? C DC 1 N4 ? ? ? 1_555 D DG 26 O6 ? ? E DC 1 F DG 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog47 hydrog ? ? C DC 1 O2 ? ? ? 1_555 D DG 26 N2 ? ? E DC 1 F DG 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog48 hydrog ? ? C DA 2 N1 ? ? ? 1_555 D DT 25 N3 ? ? E DA 2 F DT 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog49 hydrog ? ? C DA 2 N6 ? ? ? 1_555 D DT 25 O4 ? ? E DA 2 F DT 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog50 hydrog ? ? C DA 3 N1 ? ? ? 1_555 D DT 24 N3 ? ? E DA 3 F DT 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog51 hydrog ? ? C DA 3 N6 ? ? ? 1_555 D DT 24 O4 ? ? E DA 3 F DT 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog52 hydrog ? ? C DT 4 N3 ? ? ? 1_555 D DA 23 N1 ? ? E DT 4 F DA 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog53 hydrog ? ? C DT 4 O4 ? ? ? 1_555 D DA 23 N6 ? ? E DT 4 F DA 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog54 hydrog ? ? C DG 5 N1 ? ? ? 1_555 D DC 22 N3 ? ? E DG 5 F DC 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog55 hydrog ? ? C DG 5 N2 ? ? ? 1_555 D DC 22 O2 ? ? E DG 5 F DC 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog56 hydrog ? ? C DG 5 O6 ? ? ? 1_555 D DC 22 N4 ? ? E DG 5 F DC 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog57 hydrog ? ? C DC 6 N3 ? ? ? 1_555 D DG 21 N1 ? ? E DC 6 F DG 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog58 hydrog ? ? C DC 6 N4 ? ? ? 1_555 D DG 21 O6 ? ? E DC 6 F DG 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog59 hydrog ? ? C DC 6 O2 ? ? ? 1_555 D DG 21 N2 ? ? E DC 6 F DG 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog60 hydrog ? ? C DC 7 N3 ? ? ? 1_555 D DG 20 N1 ? ? E DC 7 F DG 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog61 hydrog ? ? C DC 7 N4 ? ? ? 1_555 D DG 20 O6 ? ? E DC 7 F DG 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog62 hydrog ? ? C DC 7 O2 ? ? ? 1_555 D DG 20 N2 ? ? E DC 7 F DG 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog63 hydrog ? ? C DA 8 N1 ? ? ? 1_555 D DT 19 N3 ? ? E DA 8 F DT 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog64 hydrog ? ? C DA 8 N6 ? ? ? 1_555 D DT 19 O4 ? ? E DA 8 F DT 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog65 hydrog ? ? C DA 9 N1 ? ? ? 1_555 D DT 18 N3 ? ? E DA 9 F DT 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog66 hydrog ? ? C DA 9 N6 ? ? ? 1_555 D DT 18 O4 ? ? E DA 9 F DT 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog67 hydrog ? ? C DC 10 N3 ? ? ? 1_555 D DG 17 N1 ? ? E DC 10 F DG 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog68 hydrog ? ? C DC 10 N4 ? ? ? 1_555 D DG 17 O6 ? ? E DC 10 F DG 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog69 hydrog ? ? C DC 10 O2 ? ? ? 1_555 D DG 17 N2 ? ? E DC 10 F DG 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog70 hydrog ? ? C DT 11 N3 ? ? ? 1_555 D DA 16 N1 ? ? E DT 11 F DA 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog71 hydrog ? ? C DT 11 O4 ? ? ? 1_555 D DA 16 N6 ? ? E DT 11 F DA 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog72 hydrog ? ? C DT 12 N3 ? ? ? 1_555 D DA 15 N1 ? ? E DT 12 F DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog73 hydrog ? ? C DT 12 O4 ? ? ? 1_555 D DA 15 N6 ? ? E DT 12 F DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog74 hydrog ? ? C DT 13 N3 ? ? ? 1_555 D DA 14 N1 ? ? E DT 13 F DA 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog75 hydrog ? ? C DT 13 O4 ? ? ? 1_555 D DA 14 N6 ? ? E DT 13 F DA 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog76 hydrog ? ? D DT 1 N3 ? ? ? 1_555 D DA 13 N1 ? ? F DT 14 F DA 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog77 hydrog ? ? D DT 1 O4 ? ? ? 1_555 D DA 13 N6 ? ? F DT 14 F DA 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog78 hydrog ? ? D DT 2 N3 ? ? ? 1_555 D DA 12 N1 ? ? F DT 15 F DA 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog79 hydrog ? ? D DT 2 O4 ? ? ? 1_555 D DA 12 N6 ? ? F DT 15 F DA 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog80 hydrog ? ? D DT 3 N3 ? ? ? 1_555 D DA 11 N1 ? ? F DT 16 F DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog81 hydrog ? ? D DT 3 O4 ? ? ? 1_555 D DA 11 N6 ? ? F DT 16 F DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog82 hydrog ? ? D DG 4 N1 ? ? ? 1_555 D DC 10 N3 ? ? F DG 17 F DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog83 hydrog ? ? D DG 4 N2 ? ? ? 1_555 D DC 10 O2 ? ? F DG 17 F DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog84 hydrog ? ? D DG 4 O6 ? ? ? 1_555 D DC 10 N4 ? ? F DG 17 F DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog85 hydrog ? ? D DC 5 N3 ? ? ? 1_555 D DG 9 N1 ? ? F DC 18 F DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog86 hydrog ? ? D DC 5 N4 ? ? ? 1_555 D DG 9 O6 ? ? F DC 18 F DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog87 hydrog ? ? D DC 5 O2 ? ? ? 1_555 D DG 9 N2 ? ? F DC 18 F DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog88 hydrog ? ? D DG 6 N3 ? ? ? 1_555 D DA 8 N6 ? ? F DG 19 F DA 21 1_555 ? ? ? ? ? ? 'DG-DA MISPAIR' ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? C ? 3 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR E 155 ? GLU E 159 ? TYR A 228 GLU A 232 A 2 LYS E 166 ? PRO E 170 ? LYS A 239 PRO A 243 B 1 HIS E 174 ? ILE E 175 ? HIS A 247 ILE A 248 B 2 ILE E 180 ? SER E 181 ? ILE A 253 SER A 254 C 1 ASP E 278 ? LYS E 279 ? ASP A 351 LYS A 352 C 2 LYS F 166 ? PRO F 170 ? LYS B 239 PRO B 243 C 3 TYR F 155 ? GLU F 159 ? TYR B 228 GLU B 232 D 1 HIS F 174 ? ILE F 175 ? HIS B 247 ILE B 248 D 2 ILE F 180 ? SER F 181 ? ILE B 253 SER B 254 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU E 156 ? N LEU A 229 O ILE E 169 ? O ILE A 242 B 1 2 N ILE E 175 ? N ILE A 248 O ILE E 180 ? O ILE A 253 C 1 2 N ASP E 278 ? N ASP A 351 O ALA F 168 ? O ALA B 241 C 2 3 O ILE F 169 ? O ILE B 242 N LEU F 156 ? N LEU B 229 D 1 2 N ILE F 175 ? N ILE B 248 O ILE F 180 ? O ILE B 253 # _database_PDB_matrix.entry_id 1P7D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1P7D _atom_sites.fract_transf_matrix[1][1] 0.016943 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000621 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009420 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013677 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC CYT C . n A 1 2 DA 2 2 2 DA ADE C . n A 1 3 DA 3 3 3 DA ADE C . n A 1 4 DT 4 4 4 DT THY C . n A 1 5 DG 5 5 5 DG GUA C . n A 1 6 DC 6 6 6 DC CYT C . n A 1 7 DC 7 7 7 DC CYT C . n A 1 8 DA 8 8 8 DA ADE C . n A 1 9 DA 9 9 9 DA ADE C . n A 1 10 DC 10 10 10 DC CYT C . n A 1 11 DT 11 11 11 DT THY C . n A 1 12 DT 12 12 12 DT THY C . n A 1 13 DT 13 13 13 DT THY C . n B 2 1 DT 1 14 14 DT THY D . n B 2 2 DT 2 15 15 DT THY D . n B 2 3 DT 3 16 16 DT THY D . n B 2 4 DG 4 17 17 DG GUA D . n B 2 5 DC 5 18 18 DC CYT D . n B 2 6 DG 6 19 19 DG GUA D . n B 2 7 DA 7 20 20 DA ADE D . n B 2 8 DA 8 21 21 DA ADE D . n B 2 9 DG 9 22 22 DG GUA D . n B 2 10 DC 10 23 23 DC CYT D . n B 2 11 DA 11 24 24 DA ADE D . n B 2 12 DA 12 25 25 DA ADE D . n B 2 13 DA 13 26 26 DA ADE D . n B 2 14 DA 14 27 27 DA ADE D . n B 2 15 DA 15 28 28 DA ADE D . n B 2 16 DA 16 29 29 DA ADE D . n B 2 17 DG 17 30 30 DG GUA D . n B 2 18 DT 18 31 31 DT THY D . n B 2 19 DT 19 32 32 DT THY D . n B 2 20 DG 20 33 33 DG GUA D . n B 2 21 DG 21 34 34 DG GUA D . n B 2 22 DC 22 35 35 DC CYT D . n B 2 23 DA 23 36 36 DA ADE D . n B 2 24 DT 24 37 37 DT THY D . n B 2 25 DT 25 38 38 DT THY D . n B 2 26 DG 26 39 39 DG GUA D . n C 1 1 DC 1 1 1 DC CYT E . n C 1 2 DA 2 2 2 DA ADE E . n C 1 3 DA 3 3 3 DA ADE E . n C 1 4 DT 4 4 4 DT THY E . n C 1 5 DG 5 5 5 DG GUA E . n C 1 6 DC 6 6 6 DC CYT E . n C 1 7 DC 7 7 7 DC CYT E . n C 1 8 DA 8 8 8 DA ADE E . n C 1 9 DA 9 9 9 DA ADE E . n C 1 10 DC 10 10 10 DC CYT E . n C 1 11 DT 11 11 11 DT THY E . n C 1 12 DT 12 12 12 DT THY E . n C 1 13 DT 13 13 13 DT THY E . n D 2 1 DT 1 14 14 DT THY F . n D 2 2 DT 2 15 15 DT THY F . n D 2 3 DT 3 16 16 DT THY F . n D 2 4 DG 4 17 17 DG GUA F . n D 2 5 DC 5 18 18 DC CYT F . n D 2 6 DG 6 19 19 DG GUA F . n D 2 7 DA 7 20 20 DA ADE F . n D 2 8 DA 8 21 21 DA ADE F . n D 2 9 DG 9 22 22 DG GUA F . n D 2 10 DC 10 23 23 DC CYT F . n D 2 11 DA 11 24 24 DA ADE F . n D 2 12 DA 12 25 25 DA ADE F . n D 2 13 DA 13 26 26 DA ADE F . n D 2 14 DA 14 27 27 DA ADE F . n D 2 15 DA 15 28 28 DA ADE F . n D 2 16 DA 16 29 29 DA ADE F . n D 2 17 DG 17 30 30 DG GUA F . n D 2 18 DT 18 31 31 DT THY F . n D 2 19 DT 19 32 32 DT THY F . n D 2 20 DG 20 33 33 DG GUA F . n D 2 21 DG 21 34 34 DG GUA F . n D 2 22 DC 22 35 35 DC CYT F . n D 2 23 DA 23 36 36 DA ADE F . n D 2 24 DT 24 37 37 DT THY F . n D 2 25 DT 25 38 38 DT THY F . n D 2 26 DG 26 39 39 DG GUA F . n E 3 1 MET 1 74 74 MET MET A . n E 3 2 THR 2 75 75 THR ALA A . n E 3 3 LEU 3 76 76 LEU LEU A . n E 3 4 HIS 4 77 77 HIS HIS A . n E 3 5 SER 5 78 78 SER SER A . n E 3 6 TRP 6 79 79 TRP TRP A . n E 3 7 LEU 7 80 80 LEU LEU A . n E 3 8 ASP 8 81 81 ASP ASP A . n E 3 9 ARG 9 82 82 ARG ARG A . n E 3 10 TYR 10 83 83 TYR TYR A . n E 3 11 GLU 11 84 84 GLU GLU A . n E 3 12 LYS 12 85 85 LYS LYS A . n E 3 13 ILE 13 86 86 ILE ILE A . n E 3 14 LEU 14 87 87 LEU LEU A . n E 3 15 ALA 15 88 88 ALA ALA A . n E 3 16 SER 16 89 89 SER SER A . n E 3 17 ARG 17 90 90 ARG ARG A . n E 3 18 GLY 18 91 91 GLY GLY A . n E 3 19 ILE 19 92 92 ILE ILE A . n E 3 20 LYS 20 93 93 LYS LYS A . n E 3 21 GLN 21 94 94 GLN ALA A . n E 3 22 LYS 22 95 95 LYS LYS A . n E 3 23 THR 23 96 96 THR THR A . n E 3 24 LEU 24 97 97 LEU LEU A . n E 3 25 ILE 25 98 98 ILE ILE A . n E 3 26 ASN 26 99 99 ASN ASN A . n E 3 27 TYR 27 100 100 TYR TYR A . n E 3 28 MET 28 101 101 MET MET A . n E 3 29 SER 29 102 102 SER SER A . n E 3 30 LYS 30 103 103 LYS LYS A . n E 3 31 ILE 31 104 104 ILE ILE A . n E 3 32 LYS 32 105 105 LYS LYS A . n E 3 33 ALA 33 106 106 ALA ALA A . n E 3 34 ILE 34 107 107 ILE ILE A . n E 3 35 ARG 35 108 108 ARG ARG A . n E 3 36 ARG 36 109 109 ARG ARG A . n E 3 37 GLY 37 110 110 GLY GLY A . n E 3 38 LEU 38 111 111 LEU LEU A . n E 3 39 PRO 39 112 112 PRO PRO A . n E 3 40 ASP 40 113 113 ASP ASP A . n E 3 41 ALA 41 114 114 ALA ALA A . n E 3 42 PRO 42 115 115 PRO PRO A . n E 3 43 LEU 43 116 116 LEU LEU A . n E 3 44 GLU 44 117 ? ? ? A . n E 3 45 ASP 45 118 ? ? ? A . n E 3 46 ILE 46 119 ? ? ? A . n E 3 47 THR 47 120 120 THR THR A . n E 3 48 THR 48 121 121 THR THR A . n E 3 49 LYS 49 122 122 LYS ALA A . n E 3 50 GLU 50 123 123 GLU GLU A . n E 3 51 ILE 51 124 124 ILE ILE A . n E 3 52 ALA 52 125 125 ALA ALA A . n E 3 53 ALA 53 126 126 ALA ALA A . n E 3 54 MET 54 127 127 MET MET A . n E 3 55 LEU 55 128 128 LEU LEU A . n E 3 56 ASN 56 129 129 ASN ASN A . n E 3 57 GLY 57 130 130 GLY GLY A . n E 3 58 TYR 58 131 131 TYR TYR A . n E 3 59 ILE 59 132 132 ILE ILE A . n E 3 60 ASP 60 133 133 ASP ALA A . n E 3 61 GLU 61 134 134 GLU GLU A . n E 3 62 GLY 62 135 135 GLY GLY A . n E 3 63 LYS 63 136 136 LYS LYS A . n E 3 64 ALA 64 137 137 ALA ALA A . n E 3 65 ALA 65 138 138 ALA ALA A . n E 3 66 SER 66 139 139 SER SER A . n E 3 67 ALA 67 140 140 ALA ALA A . n E 3 68 LYS 68 141 141 LYS LYS A . n E 3 69 LEU 69 142 142 LEU LEU A . n E 3 70 ILE 70 143 143 ILE ILE A . n E 3 71 ARG 71 144 144 ARG ARG A . n E 3 72 SER 72 145 145 SER SER A . n E 3 73 THR 73 146 146 THR THR A . n E 3 74 LEU 74 147 147 LEU LEU A . n E 3 75 SER 75 148 148 SER SER A . n E 3 76 ASP 76 149 149 ASP ASP A . n E 3 77 ALA 77 150 150 ALA ALA A . n E 3 78 PHE 78 151 151 PHE PHE A . n E 3 79 ARG 79 152 152 ARG ARG A . n E 3 80 GLU 80 153 153 GLU GLU A . n E 3 81 ALA 81 154 154 ALA ALA A . n E 3 82 ILE 82 155 155 ILE ILE A . n E 3 83 ALA 83 156 156 ALA ALA A . n E 3 84 GLU 84 157 157 GLU GLU A . n E 3 85 GLY 85 158 158 GLY GLY A . n E 3 86 HIS 86 159 159 HIS HIS A . n E 3 87 ILE 87 160 160 ILE ALA A . n E 3 88 THR 88 161 161 THR THR A . n E 3 89 THR 89 162 162 THR THR A . n E 3 90 ASN 90 163 163 ASN ASN A . n E 3 91 HIS 91 164 164 HIS HIS A . n E 3 92 VAL 92 165 165 VAL VAL A . n E 3 93 ALA 93 166 166 ALA ALA A . n E 3 94 ALA 94 167 167 ALA ALA A . n E 3 95 THR 95 168 168 THR THR A . n E 3 96 ARG 96 169 169 ARG ARG A . n E 3 97 ALA 97 170 170 ALA ALA A . n E 3 98 ALA 98 171 171 ALA ALA A . n E 3 99 LYS 99 172 172 LYS ALA A . n E 3 100 SER 100 173 173 SER ALA A . n E 3 101 GLU 101 174 174 GLU GLU A . n E 3 102 VAL 102 175 175 VAL VAL A . n E 3 103 ARG 103 176 176 ARG ARG A . n E 3 104 ARG 104 177 177 ARG ARG A . n E 3 105 SER 105 178 178 SER SER A . n E 3 106 ARG 106 179 179 ARG ARG A . n E 3 107 LEU 107 180 180 LEU LEU A . n E 3 108 THR 108 181 181 THR THR A . n E 3 109 ALA 109 182 182 ALA ALA A . n E 3 110 ASP 110 183 183 ASP ASP A . n E 3 111 GLU 111 184 184 GLU GLU A . n E 3 112 TYR 112 185 185 TYR TYR A . n E 3 113 LEU 113 186 186 LEU LEU A . n E 3 114 LYS 114 187 187 LYS LYS A . n E 3 115 ILE 115 188 188 ILE ILE A . n E 3 116 TYR 116 189 189 TYR TYR A . n E 3 117 GLN 117 190 190 GLN ALA A . n E 3 118 ALA 118 191 191 ALA ALA A . n E 3 119 ALA 119 192 192 ALA ALA A . n E 3 120 GLU 120 193 193 GLU ALA A . n E 3 121 SER 121 194 194 SER SER A . n E 3 122 SER 122 195 195 SER SER A . n E 3 123 PRO 123 196 196 PRO PRO A . n E 3 124 CYS 124 197 197 CYS CYS A . n E 3 125 TRP 125 198 198 TRP TRP A . n E 3 126 LEU 126 199 199 LEU LEU A . n E 3 127 ARG 127 200 200 ARG ARG A . n E 3 128 LEU 128 201 201 LEU LEU A . n E 3 129 ALA 129 202 202 ALA ALA A . n E 3 130 MET 130 203 203 MET MET A . n E 3 131 GLU 131 204 204 GLU GLU A . n E 3 132 LEU 132 205 205 LEU LEU A . n E 3 133 ALA 133 206 206 ALA ALA A . n E 3 134 VAL 134 207 207 VAL VAL A . n E 3 135 VAL 135 208 208 VAL VAL A . n E 3 136 THR 136 209 209 THR THR A . n E 3 137 GLY 137 210 210 GLY GLY A . n E 3 138 GLN 138 211 211 GLN GLN A . n E 3 139 ARG 139 212 212 ARG ARG A . n E 3 140 VAL 140 213 213 VAL VAL A . n E 3 141 GLY 141 214 214 GLY GLY A . n E 3 142 ASP 142 215 215 ASP ASP A . n E 3 143 LEU 143 216 216 LEU LEU A . n E 3 144 CYS 144 217 217 CYS CYS A . n E 3 145 GLU 145 218 218 GLU GLU A . n E 3 146 MET 146 219 219 MET MET A . n E 3 147 LYS 147 220 220 LYS LYS A . n E 3 148 TRP 148 221 221 TRP TRP A . n E 3 149 SER 149 222 222 SER SER A . n E 3 150 ASP 150 223 223 ASP ASP A . n E 3 151 ILE 151 224 224 ILE ILE A . n E 3 152 VAL 152 225 225 VAL VAL A . n E 3 153 ASP 153 226 226 ASP ASP A . n E 3 154 GLY 154 227 227 GLY GLY A . n E 3 155 TYR 155 228 228 TYR TYR A . n E 3 156 LEU 156 229 229 LEU LEU A . n E 3 157 TYR 157 230 230 TYR TYR A . n E 3 158 VAL 158 231 231 VAL VAL A . n E 3 159 GLU 159 232 232 GLU GLU A . n E 3 160 GLN 160 233 233 GLN GLN A . n E 3 161 SER 161 234 234 SER SER A . n E 3 162 LYS 162 235 235 LYS LYS A . n E 3 163 THR 163 236 236 THR THR A . n E 3 164 GLY 164 237 237 GLY GLY A . n E 3 165 VAL 165 238 238 VAL VAL A . n E 3 166 LYS 166 239 239 LYS LYS A . n E 3 167 ILE 167 240 240 ILE ILE A . n E 3 168 ALA 168 241 241 ALA ALA A . n E 3 169 ILE 169 242 242 ILE ILE A . n E 3 170 PRO 170 243 243 PRO PRO A . n E 3 171 THR 171 244 244 THR THR A . n E 3 172 ALA 172 245 245 ALA ALA A . n E 3 173 LEU 173 246 246 LEU LEU A . n E 3 174 HIS 174 247 247 HIS HIS A . n E 3 175 ILE 175 248 248 ILE ILE A . n E 3 176 ASP 176 249 249 ASP ASP A . n E 3 177 ALA 177 250 250 ALA ALA A . n E 3 178 LEU 178 251 251 LEU LEU A . n E 3 179 GLY 179 252 252 GLY GLY A . n E 3 180 ILE 180 253 253 ILE ILE A . n E 3 181 SER 181 254 254 SER SER A . n E 3 182 MET 182 255 255 MET MET A . n E 3 183 LYS 183 256 256 LYS LYS A . n E 3 184 GLU 184 257 257 GLU GLU A . n E 3 185 THR 185 258 258 THR THR A . n E 3 186 LEU 186 259 259 LEU LEU A . n E 3 187 ASP 187 260 260 ASP ASP A . n E 3 188 LYS 188 261 261 LYS LYS A . n E 3 189 CYS 189 262 262 CYS CYS A . n E 3 190 LYS 190 263 263 LYS LYS A . n E 3 191 GLU 191 264 264 GLU GLU A . n E 3 192 ILE 192 265 265 ILE ILE A . n E 3 193 LEU 193 266 266 LEU LEU A . n E 3 194 GLY 194 267 267 GLY GLY A . n E 3 195 GLY 195 268 268 GLY GLY A . n E 3 196 GLU 196 269 269 GLU ALA A . n E 3 197 THR 197 270 270 THR THR A . n E 3 198 ILE 198 271 271 ILE ILE A . n E 3 199 ILE 199 272 272 ILE ILE A . n E 3 200 ALA 200 273 273 ALA ALA A . n E 3 201 SER 201 274 274 SER SER A . n E 3 202 THR 202 275 275 THR THR A . n E 3 203 ARG 203 276 276 ARG ARG A . n E 3 204 ARG 204 277 277 ARG ALA A . n E 3 205 GLU 205 278 278 GLU ALA A . n E 3 206 PRO 206 279 279 PRO PRO A . n E 3 207 LEU 207 280 280 LEU LEU A . n E 3 208 SER 208 281 281 SER SER A . n E 3 209 SER 209 282 282 SER SER A . n E 3 210 GLY 210 283 283 GLY GLY A . n E 3 211 THR 211 284 284 THR THR A . n E 3 212 VAL 212 285 285 VAL VAL A . n E 3 213 SER 213 286 286 SER SER A . n E 3 214 ARG 214 287 287 ARG ARG A . n E 3 215 TYR 215 288 288 TYR TYR A . n E 3 216 PHE 216 289 289 PHE PHE A . n E 3 217 MET 217 290 290 MET MET A . n E 3 218 ARG 218 291 291 ARG ARG A . n E 3 219 ALA 219 292 292 ALA ALA A . n E 3 220 ARG 220 293 293 ARG ARG A . n E 3 221 LYS 221 294 294 LYS LYS A . n E 3 222 ALA 222 295 295 ALA ALA A . n E 3 223 SER 223 296 296 SER SER A . n E 3 224 GLY 224 297 297 GLY GLY A . n E 3 225 LEU 225 298 298 LEU LEU A . n E 3 226 SER 226 299 299 SER SER A . n E 3 227 PHE 227 300 300 PHE PHE A . n E 3 228 GLU 228 301 301 GLU GLU A . n E 3 229 GLY 229 302 302 GLY GLY A . n E 3 230 ASP 230 303 303 ASP ASP A . n E 3 231 PRO 231 304 304 PRO PRO A . n E 3 232 PRO 232 305 305 PRO PRO A . n E 3 233 THR 233 306 306 THR THR A . n E 3 234 PHE 234 307 307 PHE PHE A . n E 3 235 HIS 235 308 308 HIS HIS A . n E 3 236 GLU 236 309 309 GLU GLU A . n E 3 237 LEU 237 310 310 LEU LEU A . n E 3 238 ARG 238 311 311 ARG ARG A . n E 3 239 SER 239 312 312 SER SER A . n E 3 240 LEU 240 313 313 LEU LEU A . n E 3 241 SER 241 314 314 SER SER A . n E 3 242 ALA 242 315 315 ALA ALA A . n E 3 243 ARG 243 316 316 ARG ARG A . n E 3 244 LEU 244 317 317 LEU LEU A . n E 3 245 TYR 245 318 318 TYR TYR A . n E 3 246 GLU 246 319 319 GLU GLU A . n E 3 247 LYS 247 320 320 LYS LYS A . n E 3 248 GLN 248 321 321 GLN GLN A . n E 3 249 ILE 249 322 322 ILE ILE A . n E 3 250 SER 250 323 323 SER SER A . n E 3 251 ASP 251 324 324 ASP ASP A . n E 3 252 LYS 252 325 325 LYS LYS A . n E 3 253 PHE 253 326 326 PHE PHE A . n E 3 254 ALA 254 327 327 ALA ALA A . n E 3 255 GLN 255 328 328 GLN GLN A . n E 3 256 HIS 256 329 329 HIS HIS A . n E 3 257 LEU 257 330 330 LEU LEU A . n E 3 258 LEU 258 331 331 LEU LEU A . n E 3 259 GLY 259 332 332 GLY GLY A . n E 3 260 HIS 260 333 333 HIS HIS A . n E 3 261 LYS 261 334 334 LYS LYS A . n E 3 262 SER 262 335 335 SER SER A . n E 3 263 ASP 263 336 336 ASP ALA A . n E 3 264 THR 264 337 337 THR ALA A . n E 3 265 MET 265 338 338 MET MET A . n E 3 266 ALA 266 339 339 ALA ALA A . n E 3 267 SER 267 340 340 SER SER A . n E 3 268 GLN 268 341 341 GLN GLN A . n E 3 269 PTR 269 342 342 PTR PTR A . n E 3 270 ARG 270 343 343 ARG ARG A . n E 3 271 ASP 271 344 344 ASP ASP A . n E 3 272 ASP 272 345 345 ASP ASP A . n E 3 273 ARG 273 346 346 ARG ARG A . n E 3 274 GLY 274 347 347 GLY GLY A . n E 3 275 ARG 275 348 348 ARG ARG A . n E 3 276 GLU 276 349 349 GLU GLU A . n E 3 277 TRP 277 350 350 TRP TRP A . n E 3 278 ASP 278 351 351 ASP ASP A . n E 3 279 LYS 279 352 352 LYS LYS A . n E 3 280 ILE 280 353 353 ILE ILE A . n E 3 281 GLU 281 354 354 GLU GLU A . n E 3 282 ILE 282 355 355 ILE ILE A . n E 3 283 LYS 283 356 356 LYS LYS A . n F 3 1 MET 1 74 74 MET ALA B . n F 3 2 THR 2 75 75 THR ALA B . n F 3 3 LEU 3 76 76 LEU LEU B . n F 3 4 HIS 4 77 77 HIS HIS B . n F 3 5 SER 5 78 78 SER ALA B . n F 3 6 TRP 6 79 79 TRP TRP B . n F 3 7 LEU 7 80 80 LEU LEU B . n F 3 8 ASP 8 81 81 ASP ASP B . n F 3 9 ARG 9 82 82 ARG ARG B . n F 3 10 TYR 10 83 83 TYR TYR B . n F 3 11 GLU 11 84 84 GLU GLU B . n F 3 12 LYS 12 85 85 LYS ALA B . n F 3 13 ILE 13 86 86 ILE ILE B . n F 3 14 LEU 14 87 87 LEU LEU B . n F 3 15 ALA 15 88 88 ALA ALA B . n F 3 16 SER 16 89 89 SER SER B . n F 3 17 ARG 17 90 90 ARG ARG B . n F 3 18 GLY 18 91 91 GLY GLY B . n F 3 19 ILE 19 92 92 ILE ILE B . n F 3 20 LYS 20 93 93 LYS LYS B . n F 3 21 GLN 21 94 94 GLN GLN B . n F 3 22 LYS 22 95 95 LYS LYS B . n F 3 23 THR 23 96 96 THR THR B . n F 3 24 LEU 24 97 97 LEU LEU B . n F 3 25 ILE 25 98 98 ILE ILE B . n F 3 26 ASN 26 99 99 ASN ASN B . n F 3 27 TYR 27 100 100 TYR TYR B . n F 3 28 MET 28 101 101 MET MET B . n F 3 29 SER 29 102 102 SER SER B . n F 3 30 LYS 30 103 103 LYS LYS B . n F 3 31 ILE 31 104 104 ILE ILE B . n F 3 32 LYS 32 105 105 LYS LYS B . n F 3 33 ALA 33 106 106 ALA ALA B . n F 3 34 ILE 34 107 107 ILE ILE B . n F 3 35 ARG 35 108 108 ARG ARG B . n F 3 36 ARG 36 109 109 ARG ARG B . n F 3 37 GLY 37 110 110 GLY GLY B . n F 3 38 LEU 38 111 111 LEU LEU B . n F 3 39 PRO 39 112 112 PRO PRO B . n F 3 40 ASP 40 113 113 ASP ASP B . n F 3 41 ALA 41 114 114 ALA ALA B . n F 3 42 PRO 42 115 115 PRO PRO B . n F 3 43 LEU 43 116 116 LEU LEU B . n F 3 44 GLU 44 117 ? ? ? B . n F 3 45 ASP 45 118 ? ? ? B . n F 3 46 ILE 46 119 ? ? ? B . n F 3 47 THR 47 120 120 THR ALA B . n F 3 48 THR 48 121 121 THR THR B . n F 3 49 LYS 49 122 122 LYS ALA B . n F 3 50 GLU 50 123 123 GLU ALA B . n F 3 51 ILE 51 124 124 ILE ALA B . n F 3 52 ALA 52 125 125 ALA ALA B . n F 3 53 ALA 53 126 126 ALA ALA B . n F 3 54 MET 54 127 127 MET MET B . n F 3 55 LEU 55 128 128 LEU LEU B . n F 3 56 ASN 56 129 129 ASN ASN B . n F 3 57 GLY 57 130 130 GLY GLY B . n F 3 58 TYR 58 131 131 TYR TYR B . n F 3 59 ILE 59 132 132 ILE ILE B . n F 3 60 ASP 60 133 133 ASP ALA B . n F 3 61 GLU 61 134 134 GLU GLU B . n F 3 62 GLY 62 135 135 GLY GLY B . n F 3 63 LYS 63 136 136 LYS LYS B . n F 3 64 ALA 64 137 137 ALA ALA B . n F 3 65 ALA 65 138 138 ALA ALA B . n F 3 66 SER 66 139 139 SER SER B . n F 3 67 ALA 67 140 140 ALA ALA B . n F 3 68 LYS 68 141 141 LYS ALA B . n F 3 69 LEU 69 142 142 LEU LEU B . n F 3 70 ILE 70 143 143 ILE ILE B . n F 3 71 ARG 71 144 144 ARG ARG B . n F 3 72 SER 72 145 145 SER SER B . n F 3 73 THR 73 146 146 THR THR B . n F 3 74 LEU 74 147 147 LEU ALA B . n F 3 75 SER 75 148 148 SER SER B . n F 3 76 ASP 76 149 149 ASP ASP B . n F 3 77 ALA 77 150 150 ALA ALA B . n F 3 78 PHE 78 151 151 PHE PHE B . n F 3 79 ARG 79 152 152 ARG ALA B . n F 3 80 GLU 80 153 153 GLU GLU B . n F 3 81 ALA 81 154 154 ALA ALA B . n F 3 82 ILE 82 155 155 ILE ILE B . n F 3 83 ALA 83 156 156 ALA ALA B . n F 3 84 GLU 84 157 157 GLU ALA B . n F 3 85 GLY 85 158 158 GLY GLY B . n F 3 86 HIS 86 159 159 HIS HIS B . n F 3 87 ILE 87 160 160 ILE ALA B . n F 3 88 THR 88 161 161 THR THR B . n F 3 89 THR 89 162 162 THR THR B . n F 3 90 ASN 90 163 163 ASN ASN B . n F 3 91 HIS 91 164 164 HIS HIS B . n F 3 92 VAL 92 165 165 VAL VAL B . n F 3 93 ALA 93 166 166 ALA ALA B . n F 3 94 ALA 94 167 167 ALA ALA B . n F 3 95 THR 95 168 168 THR THR B . n F 3 96 ARG 96 169 169 ARG ARG B . n F 3 97 ALA 97 170 170 ALA ALA B . n F 3 98 ALA 98 171 171 ALA ALA B . n F 3 99 LYS 99 172 172 LYS ALA B . n F 3 100 SER 100 173 173 SER ALA B . n F 3 101 GLU 101 174 174 GLU GLU B . n F 3 102 VAL 102 175 175 VAL VAL B . n F 3 103 ARG 103 176 176 ARG ARG B . n F 3 104 ARG 104 177 177 ARG ARG B . n F 3 105 SER 105 178 178 SER SER B . n F 3 106 ARG 106 179 179 ARG ARG B . n F 3 107 LEU 107 180 180 LEU LEU B . n F 3 108 THR 108 181 181 THR THR B . n F 3 109 ALA 109 182 182 ALA ALA B . n F 3 110 ASP 110 183 183 ASP ASP B . n F 3 111 GLU 111 184 184 GLU GLU B . n F 3 112 TYR 112 185 185 TYR TYR B . n F 3 113 LEU 113 186 186 LEU LEU B . n F 3 114 LYS 114 187 187 LYS LYS B . n F 3 115 ILE 115 188 188 ILE ILE B . n F 3 116 TYR 116 189 189 TYR TYR B . n F 3 117 GLN 117 190 190 GLN ALA B . n F 3 118 ALA 118 191 191 ALA ALA B . n F 3 119 ALA 119 192 192 ALA ALA B . n F 3 120 GLU 120 193 193 GLU ALA B . n F 3 121 SER 121 194 194 SER SER B . n F 3 122 SER 122 195 195 SER SER B . n F 3 123 PRO 123 196 196 PRO PRO B . n F 3 124 CYS 124 197 197 CYS CYS B . n F 3 125 TRP 125 198 198 TRP TRP B . n F 3 126 LEU 126 199 199 LEU LEU B . n F 3 127 ARG 127 200 200 ARG ARG B . n F 3 128 LEU 128 201 201 LEU LEU B . n F 3 129 ALA 129 202 202 ALA ALA B . n F 3 130 MET 130 203 203 MET MET B . n F 3 131 GLU 131 204 204 GLU GLU B . n F 3 132 LEU 132 205 205 LEU LEU B . n F 3 133 ALA 133 206 206 ALA ALA B . n F 3 134 VAL 134 207 207 VAL VAL B . n F 3 135 VAL 135 208 208 VAL VAL B . n F 3 136 THR 136 209 209 THR THR B . n F 3 137 GLY 137 210 210 GLY GLY B . n F 3 138 GLN 138 211 211 GLN GLN B . n F 3 139 ARG 139 212 212 ARG ARG B . n F 3 140 VAL 140 213 213 VAL VAL B . n F 3 141 GLY 141 214 214 GLY GLY B . n F 3 142 ASP 142 215 215 ASP ASP B . n F 3 143 LEU 143 216 216 LEU LEU B . n F 3 144 CYS 144 217 217 CYS CYS B . n F 3 145 GLU 145 218 218 GLU GLU B . n F 3 146 MET 146 219 219 MET MET B . n F 3 147 LYS 147 220 220 LYS LYS B . n F 3 148 TRP 148 221 221 TRP TRP B . n F 3 149 SER 149 222 222 SER SER B . n F 3 150 ASP 150 223 223 ASP ASP B . n F 3 151 ILE 151 224 224 ILE ILE B . n F 3 152 VAL 152 225 225 VAL VAL B . n F 3 153 ASP 153 226 226 ASP ASP B . n F 3 154 GLY 154 227 227 GLY GLY B . n F 3 155 TYR 155 228 228 TYR TYR B . n F 3 156 LEU 156 229 229 LEU LEU B . n F 3 157 TYR 157 230 230 TYR TYR B . n F 3 158 VAL 158 231 231 VAL VAL B . n F 3 159 GLU 159 232 232 GLU GLU B . n F 3 160 GLN 160 233 233 GLN GLN B . n F 3 161 SER 161 234 234 SER SER B . n F 3 162 LYS 162 235 235 LYS LYS B . n F 3 163 THR 163 236 236 THR THR B . n F 3 164 GLY 164 237 237 GLY GLY B . n F 3 165 VAL 165 238 238 VAL VAL B . n F 3 166 LYS 166 239 239 LYS LYS B . n F 3 167 ILE 167 240 240 ILE ILE B . n F 3 168 ALA 168 241 241 ALA ALA B . n F 3 169 ILE 169 242 242 ILE ILE B . n F 3 170 PRO 170 243 243 PRO PRO B . n F 3 171 THR 171 244 244 THR THR B . n F 3 172 ALA 172 245 245 ALA ALA B . n F 3 173 LEU 173 246 246 LEU LEU B . n F 3 174 HIS 174 247 247 HIS HIS B . n F 3 175 ILE 175 248 248 ILE ILE B . n F 3 176 ASP 176 249 249 ASP ASP B . n F 3 177 ALA 177 250 250 ALA ALA B . n F 3 178 LEU 178 251 251 LEU LEU B . n F 3 179 GLY 179 252 252 GLY GLY B . n F 3 180 ILE 180 253 253 ILE ILE B . n F 3 181 SER 181 254 254 SER SER B . n F 3 182 MET 182 255 255 MET MET B . n F 3 183 LYS 183 256 256 LYS LYS B . n F 3 184 GLU 184 257 257 GLU GLU B . n F 3 185 THR 185 258 258 THR THR B . n F 3 186 LEU 186 259 259 LEU LEU B . n F 3 187 ASP 187 260 260 ASP ASP B . n F 3 188 LYS 188 261 261 LYS LYS B . n F 3 189 CYS 189 262 262 CYS CYS B . n F 3 190 LYS 190 263 263 LYS LYS B . n F 3 191 GLU 191 264 264 GLU GLU B . n F 3 192 ILE 192 265 265 ILE ILE B . n F 3 193 LEU 193 266 266 LEU LEU B . n F 3 194 GLY 194 267 267 GLY GLY B . n F 3 195 GLY 195 268 268 GLY GLY B . n F 3 196 GLU 196 269 269 GLU ALA B . n F 3 197 THR 197 270 270 THR THR B . n F 3 198 ILE 198 271 271 ILE ILE B . n F 3 199 ILE 199 272 272 ILE ILE B . n F 3 200 ALA 200 273 273 ALA ALA B . n F 3 201 SER 201 274 274 SER SER B . n F 3 202 THR 202 275 275 THR THR B . n F 3 203 ARG 203 276 276 ARG ARG B . n F 3 204 ARG 204 277 277 ARG ALA B . n F 3 205 GLU 205 278 278 GLU ALA B . n F 3 206 PRO 206 279 279 PRO PRO B . n F 3 207 LEU 207 280 280 LEU LEU B . n F 3 208 SER 208 281 281 SER SER B . n F 3 209 SER 209 282 282 SER SER B . n F 3 210 GLY 210 283 283 GLY GLY B . n F 3 211 THR 211 284 284 THR THR B . n F 3 212 VAL 212 285 285 VAL VAL B . n F 3 213 SER 213 286 286 SER SER B . n F 3 214 ARG 214 287 287 ARG ARG B . n F 3 215 TYR 215 288 288 TYR TYR B . n F 3 216 PHE 216 289 289 PHE PHE B . n F 3 217 MET 217 290 290 MET MET B . n F 3 218 ARG 218 291 291 ARG ARG B . n F 3 219 ALA 219 292 292 ALA ALA B . n F 3 220 ARG 220 293 293 ARG ARG B . n F 3 221 LYS 221 294 294 LYS LYS B . n F 3 222 ALA 222 295 295 ALA ALA B . n F 3 223 SER 223 296 296 SER SER B . n F 3 224 GLY 224 297 297 GLY GLY B . n F 3 225 LEU 225 298 298 LEU LEU B . n F 3 226 SER 226 299 299 SER SER B . n F 3 227 PHE 227 300 300 PHE PHE B . n F 3 228 GLU 228 301 301 GLU GLU B . n F 3 229 GLY 229 302 302 GLY GLY B . n F 3 230 ASP 230 303 303 ASP ASP B . n F 3 231 PRO 231 304 304 PRO PRO B . n F 3 232 PRO 232 305 305 PRO PRO B . n F 3 233 THR 233 306 306 THR THR B . n F 3 234 PHE 234 307 307 PHE PHE B . n F 3 235 HIS 235 308 308 HIS HIS B . n F 3 236 GLU 236 309 309 GLU GLU B . n F 3 237 LEU 237 310 310 LEU LEU B . n F 3 238 ARG 238 311 311 ARG ARG B . n F 3 239 SER 239 312 312 SER SER B . n F 3 240 LEU 240 313 313 LEU LEU B . n F 3 241 SER 241 314 314 SER SER B . n F 3 242 ALA 242 315 315 ALA ALA B . n F 3 243 ARG 243 316 316 ARG ARG B . n F 3 244 LEU 244 317 317 LEU LEU B . n F 3 245 TYR 245 318 318 TYR TYR B . n F 3 246 GLU 246 319 319 GLU GLU B . n F 3 247 LYS 247 320 320 LYS LYS B . n F 3 248 GLN 248 321 321 GLN GLN B . n F 3 249 ILE 249 322 322 ILE ILE B . n F 3 250 SER 250 323 323 SER SER B . n F 3 251 ASP 251 324 324 ASP ASP B . n F 3 252 LYS 252 325 325 LYS ALA B . n F 3 253 PHE 253 326 326 PHE PHE B . n F 3 254 ALA 254 327 327 ALA ALA B . n F 3 255 GLN 255 328 328 GLN GLN B . n F 3 256 HIS 256 329 329 HIS HIS B . n F 3 257 LEU 257 330 330 LEU LEU B . n F 3 258 LEU 258 331 331 LEU LEU B . n F 3 259 GLY 259 332 332 GLY GLY B . n F 3 260 HIS 260 333 333 HIS HIS B . n F 3 261 LYS 261 334 334 LYS LYS B . n F 3 262 SER 262 335 335 SER SER B . n F 3 263 ASP 263 336 336 ASP ALA B . n F 3 264 THR 264 337 337 THR ALA B . n F 3 265 MET 265 338 338 MET MET B . n F 3 266 ALA 266 339 339 ALA ALA B . n F 3 267 SER 267 340 340 SER SER B . n F 3 268 GLN 268 341 341 GLN GLN B . n F 3 269 PTR 269 342 342 PTR PTR B . n F 3 270 ARG 270 343 343 ARG ARG B . n F 3 271 ASP 271 344 344 ASP ASP B . n F 3 272 ASP 272 345 345 ASP ASP B . n F 3 273 ARG 273 346 346 ARG ARG B . n F 3 274 GLY 274 347 347 GLY GLY B . n F 3 275 ARG 275 348 348 ARG ARG B . n F 3 276 GLU 276 349 349 GLU GLU B . n F 3 277 TRP 277 350 350 TRP TRP B . n F 3 278 ASP 278 351 351 ASP ASP B . n F 3 279 LYS 279 352 352 LYS LYS B . n F 3 280 ILE 280 353 353 ILE ILE B . n F 3 281 GLU 281 354 354 GLU GLU B . n F 3 282 ILE 282 355 355 ILE ILE B . n F 3 283 LYS 283 356 356 LYS ALA B . n # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 E PTR 269 A PTR 342 ? TYR O-PHOSPHOTYROSINE 2 F PTR 269 B PTR 342 ? TYR O-PHOSPHOTYROSINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? trimeric 3 2 author_defined_assembly ? trimeric 3 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,E 2 1 C,D,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-08-12 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 TRUNCATE 'data reduction' . ? 2 MLPHARE phasing . ? 3 CNS refinement . ? 4 HKL-2000 'data reduction' . ? 5 CCP4 'data scaling' '(TRUNCATE)' ? 6 # _pdbx_database_remark.id 999 _pdbx_database_remark.text 'translational initiation' # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" D DA 28 ? ? "C1'" D DA 28 ? ? N9 D DA 28 ? ? 110.86 108.30 2.56 0.30 N 2 1 "O4'" F DA 28 ? ? "C1'" F DA 28 ? ? N9 F DA 28 ? ? 110.95 108.30 2.65 0.30 N 3 1 "O4'" F DT 32 ? ? "C1'" F DT 32 ? ? N1 F DT 32 ? ? 110.20 108.30 1.90 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 89 ? ? -83.52 -130.92 2 1 ARG A 90 ? ? 59.61 -22.83 3 1 ARG A 108 ? ? -53.09 -71.46 4 1 PRO A 112 ? ? -57.26 -164.84 5 1 ALA A 114 ? ? -45.83 164.54 6 1 PRO A 115 ? ? -85.10 -75.68 7 1 LYS A 136 ? ? -107.98 59.18 8 1 HIS A 164 ? ? -57.89 5.77 9 1 ALA A 245 ? ? -68.39 5.08 10 1 HIS A 247 ? ? -173.46 145.27 11 1 GLU A 264 ? ? -65.78 -72.80 12 1 ARG A 277 ? ? 43.93 28.71 13 1 ILE A 322 ? ? -135.15 -92.63 14 1 SER A 335 ? ? -32.07 -35.73 15 1 MET A 338 ? ? -81.95 36.64 16 1 SER A 340 ? ? 46.79 129.31 17 1 GLU A 354 ? ? -27.78 -103.41 18 1 ILE A 355 ? ? 121.86 74.55 19 1 SER B 89 ? ? -77.36 -116.70 20 1 ARG B 90 ? ? 49.47 -24.10 21 1 ARG B 109 ? ? -57.33 -8.47 22 1 PRO B 112 ? ? -58.07 -165.60 23 1 ALA B 114 ? ? -46.41 164.37 24 1 PRO B 115 ? ? -85.03 -75.83 25 1 LYS B 136 ? ? -109.05 61.04 26 1 GLU B 157 ? ? -64.65 3.35 27 1 ALA B 167 ? ? -64.24 10.42 28 1 ALA B 245 ? ? -69.85 5.11 29 1 HIS B 247 ? ? -173.63 145.02 30 1 GLU B 264 ? ? -65.04 -73.28 31 1 ARG B 276 ? ? -99.79 40.02 32 1 ILE B 322 ? ? -132.42 -92.08 33 1 ASP B 336 ? ? 76.42 37.99 34 1 THR B 337 ? ? -106.73 -169.93 35 1 ALA B 339 ? ? -53.09 -81.18 36 1 SER B 340 ? ? 54.53 129.88 37 1 TRP B 350 ? ? 74.97 119.98 38 1 GLU B 354 ? ? -48.04 -97.19 39 1 ILE B 355 ? ? 102.83 41.82 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DC C 10 ? ? 0.080 'SIDE CHAIN' 2 1 DC E 10 ? ? 0.079 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A THR 75 ? OG1 ? E THR 2 OG1 2 1 Y 1 A THR 75 ? CG2 ? E THR 2 CG2 3 1 Y 1 A GLN 94 ? CG ? E GLN 21 CG 4 1 Y 1 A GLN 94 ? CD ? E GLN 21 CD 5 1 Y 1 A GLN 94 ? OE1 ? E GLN 21 OE1 6 1 Y 1 A GLN 94 ? NE2 ? E GLN 21 NE2 7 1 Y 1 A LYS 122 ? CG ? E LYS 49 CG 8 1 Y 1 A LYS 122 ? CD ? E LYS 49 CD 9 1 Y 1 A LYS 122 ? CE ? E LYS 49 CE 10 1 Y 1 A LYS 122 ? NZ ? E LYS 49 NZ 11 1 Y 1 A ASP 133 ? CG ? E ASP 60 CG 12 1 Y 1 A ASP 133 ? OD1 ? E ASP 60 OD1 13 1 Y 1 A ASP 133 ? OD2 ? E ASP 60 OD2 14 1 Y 1 A ILE 160 ? CG1 ? E ILE 87 CG1 15 1 Y 1 A ILE 160 ? CG2 ? E ILE 87 CG2 16 1 Y 1 A ILE 160 ? CD1 ? E ILE 87 CD1 17 1 Y 1 A LYS 172 ? CG ? E LYS 99 CG 18 1 Y 1 A LYS 172 ? CD ? E LYS 99 CD 19 1 Y 1 A LYS 172 ? CE ? E LYS 99 CE 20 1 Y 1 A LYS 172 ? NZ ? E LYS 99 NZ 21 1 Y 1 A SER 173 ? OG ? E SER 100 OG 22 1 Y 1 A GLN 190 ? CG ? E GLN 117 CG 23 1 Y 1 A GLN 190 ? CD ? E GLN 117 CD 24 1 Y 1 A GLN 190 ? OE1 ? E GLN 117 OE1 25 1 Y 1 A GLN 190 ? NE2 ? E GLN 117 NE2 26 1 Y 1 A GLU 193 ? CG ? E GLU 120 CG 27 1 Y 1 A GLU 193 ? CD ? E GLU 120 CD 28 1 Y 1 A GLU 193 ? OE1 ? E GLU 120 OE1 29 1 Y 1 A GLU 193 ? OE2 ? E GLU 120 OE2 30 1 Y 1 A GLU 269 ? CG ? E GLU 196 CG 31 1 Y 1 A GLU 269 ? CD ? E GLU 196 CD 32 1 Y 1 A GLU 269 ? OE1 ? E GLU 196 OE1 33 1 Y 1 A GLU 269 ? OE2 ? E GLU 196 OE2 34 1 Y 1 A ARG 277 ? CG ? E ARG 204 CG 35 1 Y 1 A ARG 277 ? CD ? E ARG 204 CD 36 1 Y 1 A ARG 277 ? NE ? E ARG 204 NE 37 1 Y 1 A ARG 277 ? CZ ? E ARG 204 CZ 38 1 Y 1 A ARG 277 ? NH1 ? E ARG 204 NH1 39 1 Y 1 A ARG 277 ? NH2 ? E ARG 204 NH2 40 1 Y 1 A GLU 278 ? CG ? E GLU 205 CG 41 1 Y 1 A GLU 278 ? CD ? E GLU 205 CD 42 1 Y 1 A GLU 278 ? OE1 ? E GLU 205 OE1 43 1 Y 1 A GLU 278 ? OE2 ? E GLU 205 OE2 44 1 Y 1 A ASP 336 ? CG ? E ASP 263 CG 45 1 Y 1 A ASP 336 ? OD1 ? E ASP 263 OD1 46 1 Y 1 A ASP 336 ? OD2 ? E ASP 263 OD2 47 1 Y 1 A THR 337 ? OG1 ? E THR 264 OG1 48 1 Y 1 A THR 337 ? CG2 ? E THR 264 CG2 49 1 Y 1 B MET 74 ? CG ? F MET 1 CG 50 1 Y 1 B MET 74 ? SD ? F MET 1 SD 51 1 Y 1 B MET 74 ? CE ? F MET 1 CE 52 1 Y 1 B THR 75 ? OG1 ? F THR 2 OG1 53 1 Y 1 B THR 75 ? CG2 ? F THR 2 CG2 54 1 Y 1 B SER 78 ? OG ? F SER 5 OG 55 1 Y 1 B LYS 85 ? CG ? F LYS 12 CG 56 1 Y 1 B LYS 85 ? CD ? F LYS 12 CD 57 1 Y 1 B LYS 85 ? CE ? F LYS 12 CE 58 1 Y 1 B LYS 85 ? NZ ? F LYS 12 NZ 59 1 Y 1 B THR 120 ? OG1 ? F THR 47 OG1 60 1 Y 1 B THR 120 ? CG2 ? F THR 47 CG2 61 1 Y 1 B LYS 122 ? CG ? F LYS 49 CG 62 1 Y 1 B LYS 122 ? CD ? F LYS 49 CD 63 1 Y 1 B LYS 122 ? CE ? F LYS 49 CE 64 1 Y 1 B LYS 122 ? NZ ? F LYS 49 NZ 65 1 Y 1 B GLU 123 ? CG ? F GLU 50 CG 66 1 Y 1 B GLU 123 ? CD ? F GLU 50 CD 67 1 Y 1 B GLU 123 ? OE1 ? F GLU 50 OE1 68 1 Y 1 B GLU 123 ? OE2 ? F GLU 50 OE2 69 1 Y 1 B ILE 124 ? CG1 ? F ILE 51 CG1 70 1 Y 1 B ILE 124 ? CG2 ? F ILE 51 CG2 71 1 Y 1 B ILE 124 ? CD1 ? F ILE 51 CD1 72 1 Y 1 B ASP 133 ? CG ? F ASP 60 CG 73 1 Y 1 B ASP 133 ? OD1 ? F ASP 60 OD1 74 1 Y 1 B ASP 133 ? OD2 ? F ASP 60 OD2 75 1 Y 1 B LYS 141 ? CG ? F LYS 68 CG 76 1 Y 1 B LYS 141 ? CD ? F LYS 68 CD 77 1 Y 1 B LYS 141 ? CE ? F LYS 68 CE 78 1 Y 1 B LYS 141 ? NZ ? F LYS 68 NZ 79 1 Y 1 B LEU 147 ? CG ? F LEU 74 CG 80 1 Y 1 B LEU 147 ? CD1 ? F LEU 74 CD1 81 1 Y 1 B LEU 147 ? CD2 ? F LEU 74 CD2 82 1 Y 1 B ARG 152 ? CG ? F ARG 79 CG 83 1 Y 1 B ARG 152 ? CD ? F ARG 79 CD 84 1 Y 1 B ARG 152 ? NE ? F ARG 79 NE 85 1 Y 1 B ARG 152 ? CZ ? F ARG 79 CZ 86 1 Y 1 B ARG 152 ? NH1 ? F ARG 79 NH1 87 1 Y 1 B ARG 152 ? NH2 ? F ARG 79 NH2 88 1 Y 1 B GLU 157 ? CG ? F GLU 84 CG 89 1 Y 1 B GLU 157 ? CD ? F GLU 84 CD 90 1 Y 1 B GLU 157 ? OE1 ? F GLU 84 OE1 91 1 Y 1 B GLU 157 ? OE2 ? F GLU 84 OE2 92 1 Y 1 B ILE 160 ? CG1 ? F ILE 87 CG1 93 1 Y 1 B ILE 160 ? CG2 ? F ILE 87 CG2 94 1 Y 1 B ILE 160 ? CD1 ? F ILE 87 CD1 95 1 Y 1 B LYS 172 ? CG ? F LYS 99 CG 96 1 Y 1 B LYS 172 ? CD ? F LYS 99 CD 97 1 Y 1 B LYS 172 ? CE ? F LYS 99 CE 98 1 Y 1 B LYS 172 ? NZ ? F LYS 99 NZ 99 1 Y 1 B SER 173 ? OG ? F SER 100 OG 100 1 Y 1 B GLN 190 ? CG ? F GLN 117 CG 101 1 Y 1 B GLN 190 ? CD ? F GLN 117 CD 102 1 Y 1 B GLN 190 ? OE1 ? F GLN 117 OE1 103 1 Y 1 B GLN 190 ? NE2 ? F GLN 117 NE2 104 1 Y 1 B GLU 193 ? CG ? F GLU 120 CG 105 1 Y 1 B GLU 193 ? CD ? F GLU 120 CD 106 1 Y 1 B GLU 193 ? OE1 ? F GLU 120 OE1 107 1 Y 1 B GLU 193 ? OE2 ? F GLU 120 OE2 108 1 Y 1 B GLU 269 ? CG ? F GLU 196 CG 109 1 Y 1 B GLU 269 ? CD ? F GLU 196 CD 110 1 Y 1 B GLU 269 ? OE1 ? F GLU 196 OE1 111 1 Y 1 B GLU 269 ? OE2 ? F GLU 196 OE2 112 1 Y 1 B ARG 277 ? CG ? F ARG 204 CG 113 1 Y 1 B ARG 277 ? CD ? F ARG 204 CD 114 1 Y 1 B ARG 277 ? NE ? F ARG 204 NE 115 1 Y 1 B ARG 277 ? CZ ? F ARG 204 CZ 116 1 Y 1 B ARG 277 ? NH1 ? F ARG 204 NH1 117 1 Y 1 B ARG 277 ? NH2 ? F ARG 204 NH2 118 1 Y 1 B GLU 278 ? CG ? F GLU 205 CG 119 1 Y 1 B GLU 278 ? CD ? F GLU 205 CD 120 1 Y 1 B GLU 278 ? OE1 ? F GLU 205 OE1 121 1 Y 1 B GLU 278 ? OE2 ? F GLU 205 OE2 122 1 Y 1 B LYS 325 ? CG ? F LYS 252 CG 123 1 Y 1 B LYS 325 ? CD ? F LYS 252 CD 124 1 Y 1 B LYS 325 ? CE ? F LYS 252 CE 125 1 Y 1 B LYS 325 ? NZ ? F LYS 252 NZ 126 1 Y 1 B ASP 336 ? CG ? F ASP 263 CG 127 1 Y 1 B ASP 336 ? OD1 ? F ASP 263 OD1 128 1 Y 1 B ASP 336 ? OD2 ? F ASP 263 OD2 129 1 Y 1 B THR 337 ? OG1 ? F THR 264 OG1 130 1 Y 1 B THR 337 ? CG2 ? F THR 264 CG2 131 1 Y 1 B LYS 356 ? CG ? F LYS 283 CG 132 1 Y 1 B LYS 356 ? CD ? F LYS 283 CD 133 1 Y 1 B LYS 356 ? CE ? F LYS 283 CE 134 1 Y 1 B LYS 356 ? NZ ? F LYS 283 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLU 117 ? E GLU 44 2 1 Y 1 A ASP 118 ? E ASP 45 3 1 Y 1 A ILE 119 ? E ILE 46 4 1 Y 1 B GLU 117 ? F GLU 44 5 1 Y 1 B ASP 118 ? F ASP 45 6 1 Y 1 B ILE 119 ? F ILE 46 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1P7D 'double helix' 1P7D 'b-form double helix' 1P7D 'hairpin loop' 1P7D 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 26 1_555 -0.050 -0.128 0.091 -1.360 12.136 -4.914 1 C_DC1:DG39_D C 1 ? D 39 ? 19 1 1 A DA 2 1_555 B DT 25 1_555 -0.068 -0.143 -0.040 0.621 1.707 4.549 2 C_DA2:DT38_D C 2 ? D 38 ? 20 1 1 A DA 3 1_555 B DT 24 1_555 -0.031 -0.104 0.213 6.906 -7.563 0.585 3 C_DA3:DT37_D C 3 ? D 37 ? 20 1 1 A DT 4 1_555 B DA 23 1_555 -0.170 -0.050 -0.067 8.310 -6.402 1.394 4 C_DT4:DA36_D C 4 ? D 36 ? 20 1 1 A DG 5 1_555 B DC 22 1_555 -0.140 -0.055 -0.031 1.872 4.031 -0.302 5 C_DG5:DC35_D C 5 ? D 35 ? 19 1 1 A DC 6 1_555 B DG 21 1_555 0.077 -0.119 -0.241 0.867 -4.878 -0.343 6 C_DC6:DG34_D C 6 ? D 34 ? 19 1 1 A DC 7 1_555 B DG 20 1_555 0.007 -0.063 0.202 -7.008 -0.529 -4.451 7 C_DC7:DG33_D C 7 ? D 33 ? 19 1 1 A DA 8 1_555 B DT 19 1_555 -0.151 -0.197 -0.087 -1.348 -5.175 4.338 8 C_DA8:DT32_D C 8 ? D 32 ? 20 1 1 A DA 9 1_555 B DT 18 1_555 -0.009 -0.052 0.064 7.890 -5.299 1.020 9 C_DA9:DT31_D C 9 ? D 31 ? 20 1 1 A DC 10 1_555 B DG 17 1_555 0.290 -0.077 -0.525 13.007 -11.744 2.453 10 C_DC10:DG30_D C 10 ? D 30 ? 19 1 1 A DT 11 1_555 B DA 16 1_555 -0.117 -0.284 -0.041 3.657 -0.714 1.842 11 C_DT11:DA29_D C 11 ? D 29 ? 20 1 1 A DT 12 1_555 B DA 15 1_555 -0.109 -0.154 0.111 -7.161 -0.417 -0.961 12 C_DT12:DA28_D C 12 ? D 28 ? 20 1 1 A DT 13 1_555 B DA 14 1_555 0.075 -0.100 0.029 1.269 -9.922 3.394 13 C_DT13:DA27_D C 13 ? D 27 ? 20 1 1 B DT 1 1_555 B DA 13 1_555 -0.088 -0.075 -0.273 6.447 -14.025 2.065 14 D_DT14:DA26_D D 14 ? D 26 ? 20 1 1 B DT 2 1_555 B DA 12 1_555 -0.119 -0.118 -0.289 0.895 -11.784 -0.925 15 D_DT15:DA25_D D 15 ? D 25 ? 20 1 1 B DT 3 1_555 B DA 11 1_555 -0.028 -0.164 -0.370 -1.915 -10.806 -1.073 16 D_DT16:DA24_D D 16 ? D 24 ? 20 1 1 B DG 4 1_555 B DC 10 1_555 0.078 -0.076 0.215 -10.652 3.240 -1.855 17 D_DG17:DC23_D D 17 ? D 23 ? 19 1 1 B DC 5 1_555 B DG 9 1_555 0.198 -0.027 -0.327 10.119 17.065 2.037 18 D_DC18:DG22_D D 18 ? D 22 ? 19 1 1 B DG 6 1_555 B DA 8 1_555 6.861 -4.294 0.889 29.764 1.129 12.995 19 D_DG19:DA21_D D 19 ? D 21 ? ? ? 1 C DC 1 1_555 D DG 26 1_555 0.095 -0.164 0.074 -7.262 17.986 -0.155 20 E_DC1:DG39_F E 1 ? F 39 ? 19 1 1 C DA 2 1_555 D DT 25 1_555 -0.028 -0.045 -0.233 2.391 -8.384 -2.584 21 E_DA2:DT38_F E 2 ? F 38 ? 20 1 1 C DA 3 1_555 D DT 24 1_555 0.070 -0.247 0.821 4.120 -5.521 -0.117 22 E_DA3:DT37_F E 3 ? F 37 ? 20 1 1 C DT 4 1_555 D DA 23 1_555 -0.062 -0.043 0.301 8.634 -4.808 -1.751 23 E_DT4:DA36_F E 4 ? F 36 ? 20 1 1 C DG 5 1_555 D DC 22 1_555 -0.149 -0.048 0.012 2.308 4.072 -0.412 24 E_DG5:DC35_F E 5 ? F 35 ? 19 1 1 C DC 6 1_555 D DG 21 1_555 0.095 -0.092 -0.235 0.552 -4.440 -0.198 25 E_DC6:DG34_F E 6 ? F 34 ? 19 1 1 C DC 7 1_555 D DG 20 1_555 0.005 -0.048 0.271 -7.073 -0.972 -4.146 26 E_DC7:DG33_F E 7 ? F 33 ? 19 1 1 C DA 8 1_555 D DT 19 1_555 -0.119 -0.190 -0.097 -0.491 -4.480 4.392 27 E_DA8:DT32_F E 8 ? F 32 ? 20 1 1 C DA 9 1_555 D DT 18 1_555 -0.019 -0.054 0.024 7.673 -5.281 1.196 28 E_DA9:DT31_F E 9 ? F 31 ? 20 1 1 C DC 10 1_555 D DG 17 1_555 0.288 -0.087 -0.571 13.139 -12.932 2.479 29 E_DC10:DG30_F E 10 ? F 30 ? 19 1 1 C DT 11 1_555 D DA 16 1_555 -0.126 -0.283 0.011 3.453 -0.892 1.730 30 E_DT11:DA29_F E 11 ? F 29 ? 20 1 1 C DT 12 1_555 D DA 15 1_555 -0.096 -0.161 0.048 -5.975 -0.433 -0.723 31 E_DT12:DA28_F E 12 ? F 28 ? 20 1 1 C DT 13 1_555 D DA 14 1_555 0.073 -0.112 0.032 0.850 -9.616 3.173 32 E_DT13:DA27_F E 13 ? F 27 ? 20 1 1 D DT 1 1_555 D DA 13 1_555 -0.122 -0.077 -0.195 6.015 -12.966 1.632 33 F_DT14:DA26_F F 14 ? F 26 ? 20 1 1 D DT 2 1_555 D DA 12 1_555 -0.187 -0.028 -0.089 -7.058 -13.606 -0.721 34 F_DT15:DA25_F F 15 ? F 25 ? 20 1 1 D DT 3 1_555 D DA 11 1_555 0.165 0.094 -0.017 -11.495 -12.821 3.116 35 F_DT16:DA24_F F 16 ? F 24 ? 20 1 1 D DG 4 1_555 D DC 10 1_555 -0.222 -0.011 -0.284 -15.587 -5.904 -0.976 36 F_DG17:DC23_F F 17 ? F 23 ? 19 1 1 D DC 5 1_555 D DG 9 1_555 0.194 0.006 0.022 0.134 15.535 -0.915 37 F_DC18:DG22_F F 18 ? F 22 ? 19 1 1 D DG 6 1_555 D DA 8 1_555 6.747 -2.453 0.980 23.851 6.447 37.162 38 F_DG19:DA21_F F 19 ? F 21 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 26 1_555 A DA 2 1_555 B DT 25 1_555 0.847 0.442 3.439 8.170 -6.367 43.565 1.201 -0.318 3.441 -8.437 -10.827 44.721 1 CC_DC1DA2:DT38DG39_DD C 1 ? D 39 ? C 2 ? D 38 ? 1 A DA 2 1_555 B DT 25 1_555 A DA 3 1_555 B DT 24 1_555 -0.613 0.344 3.221 -2.898 -0.961 34.351 0.729 0.588 3.250 -1.623 4.895 34.483 2 CC_DA2DA3:DT37DT38_DD C 2 ? D 38 ? C 3 ? D 37 ? 1 A DA 3 1_555 B DT 24 1_555 A DT 4 1_555 B DA 23 1_555 0.396 -1.019 3.295 2.283 7.903 29.288 -3.484 -0.310 2.947 15.254 -4.406 30.396 3 CC_DA3DT4:DA36DT37_DD C 3 ? D 37 ? C 4 ? D 36 ? 1 A DT 4 1_555 B DA 23 1_555 A DG 5 1_555 B DC 22 1_555 -0.466 -0.348 3.392 -3.448 2.795 34.911 -1.009 0.237 3.384 4.635 5.719 35.184 4 CC_DT4DG5:DC35DA36_DD C 4 ? D 36 ? C 5 ? D 35 ? 1 A DG 5 1_555 B DC 22 1_555 A DC 6 1_555 B DG 21 1_555 -0.039 -0.536 3.349 1.813 5.738 35.078 -1.723 0.332 3.218 9.434 -2.981 35.574 5 CC_DG5DC6:DG34DC35_DD C 5 ? D 35 ? C 6 ? D 34 ? 1 A DC 6 1_555 B DG 21 1_555 A DC 7 1_555 B DG 20 1_555 -0.578 -0.190 3.527 -4.166 8.645 33.142 -1.776 0.275 3.417 14.775 7.120 34.466 6 CC_DC6DC7:DG33DG34_DD C 6 ? D 34 ? C 7 ? D 33 ? 1 A DC 7 1_555 B DG 20 1_555 A DA 8 1_555 B DT 19 1_555 1.340 0.069 3.210 4.540 -0.228 36.933 0.138 -1.494 3.345 -0.358 -7.134 37.202 7 CC_DC7DA8:DT32DG33_DD C 7 ? D 33 ? C 8 ? D 32 ? 1 A DA 8 1_555 B DT 19 1_555 A DA 9 1_555 B DT 18 1_555 -0.383 0.521 3.110 -0.050 7.340 27.775 -0.555 0.762 3.142 14.962 0.102 28.710 8 CC_DA8DA9:DT31DT32_DD C 8 ? D 32 ? C 9 ? D 31 ? 1 A DA 9 1_555 B DT 18 1_555 A DC 10 1_555 B DG 17 1_555 0.424 -0.839 3.125 3.180 0.884 36.842 -1.436 -0.259 3.130 1.395 -5.019 36.984 9 CC_DA9DC10:DG30DT31_DD C 9 ? D 31 ? C 10 ? D 30 ? 1 A DC 10 1_555 B DG 17 1_555 A DT 11 1_555 B DA 16 1_555 0.218 -0.729 3.693 -2.170 5.504 32.978 -2.270 -0.776 3.508 9.599 3.784 33.490 10 CC_DC10DT11:DA29DG30_DD C 10 ? D 30 ? C 11 ? D 29 ? 1 A DT 11 1_555 B DA 16 1_555 A DT 12 1_555 B DA 15 1_555 -0.427 -1.478 3.696 1.532 -6.940 34.658 -1.234 0.968 3.889 -11.500 -2.538 35.358 11 CC_DT11DT12:DA28DA29_DD C 11 ? D 29 ? C 12 ? D 28 ? 1 A DT 12 1_555 B DA 15 1_555 A DT 13 1_555 B DA 14 1_555 -0.158 -0.600 3.133 -0.654 -0.846 31.478 -0.955 0.173 3.150 -1.559 1.205 31.495 12 CC_DT12DT13:DA27DA28_DD C 12 ? D 28 ? C 13 ? D 27 ? 1 A DT 13 1_555 B DA 14 1_555 B DT 1 1_555 B DA 13 1_555 -0.210 0.036 3.110 3.569 4.399 31.215 -0.701 1.006 3.045 8.091 -6.565 31.713 13 CD_DT13DT14:DA26DA27_DD C 13 ? D 27 ? D 14 ? D 26 ? 1 B DT 1 1_555 B DA 13 1_555 B DT 2 1_555 B DA 12 1_555 0.293 -0.043 3.424 3.381 0.130 38.421 -0.082 -0.004 3.436 0.198 -5.125 38.564 14 DD_DT14DT15:DA25DA26_DD D 14 ? D 26 ? D 15 ? D 25 ? 1 B DT 2 1_555 B DA 12 1_555 B DT 3 1_555 B DA 11 1_555 0.017 -0.268 3.273 2.712 0.064 36.907 -0.431 0.338 3.265 0.101 -4.277 37.003 15 DD_DT15DT16:DA24DA25_DD D 15 ? D 25 ? D 16 ? D 24 ? 1 B DT 3 1_555 B DA 11 1_555 B DG 4 1_555 B DC 10 1_555 0.692 -0.056 3.367 -4.100 3.252 37.277 -0.517 -1.615 3.260 5.056 6.376 37.630 16 DD_DT16DG17:DC23DA24_DD D 16 ? D 24 ? D 17 ? D 23 ? 1 B DG 4 1_555 B DC 10 1_555 B DC 5 1_555 B DG 9 1_555 0.806 0.415 3.080 3.066 2.202 31.822 0.371 -0.931 3.163 3.999 -5.566 32.040 17 DD_DG17DC18:DG22DC23_DD D 17 ? D 23 ? D 18 ? D 22 ? 1 B DC 5 1_555 B DG 9 1_555 B DG 6 1_555 B DA 8 1_555 0.269 1.319 2.950 -5.403 4.016 56.334 1.184 -0.557 2.994 4.237 5.700 56.702 18 DD_DC18DG19:DA21DG22_DD D 18 ? D 22 ? D 19 ? D 21 ? 1 C DC 1 1_555 D DG 26 1_555 C DA 2 1_555 D DT 25 1_555 -0.410 0.897 3.300 9.039 -9.395 41.757 2.080 1.393 2.898 -12.810 -12.325 43.658 19 EE_DC1DA2:DT38DG39_FF E 1 ? F 39 ? E 2 ? F 38 ? 1 C DA 2 1_555 D DT 25 1_555 C DA 3 1_555 D DT 24 1_555 0.057 -0.293 3.254 -9.430 -4.094 35.522 0.091 -1.363 3.151 -6.543 15.070 36.934 20 EE_DA2DA3:DT37DT38_FF E 2 ? F 38 ? E 3 ? F 37 ? 1 C DA 3 1_555 D DT 24 1_555 C DT 4 1_555 D DA 23 1_555 0.167 -1.024 3.249 4.830 -1.594 30.253 -1.621 0.641 3.284 -3.028 -9.173 30.668 21 EE_DA3DT4:DA36DT37_FF E 3 ? F 37 ? E 4 ? F 36 ? 1 C DT 4 1_555 D DA 23 1_555 C DG 5 1_555 D DC 22 1_555 -0.123 -0.872 3.337 0.889 3.606 35.736 -1.932 0.327 3.233 5.856 -1.443 35.922 22 EE_DT4DG5:DC35DA36_FF E 4 ? F 36 ? E 5 ? F 35 ? 1 C DG 5 1_555 D DC 22 1_555 C DC 6 1_555 D DG 21 1_555 -0.019 -0.534 3.369 1.920 5.854 35.239 -1.728 0.312 3.236 9.579 -3.143 35.756 23 EE_DG5DC6:DG34DC35_FF E 5 ? F 35 ? E 6 ? F 34 ? 1 C DC 6 1_555 D DG 21 1_555 C DC 7 1_555 D DG 20 1_555 -0.596 -0.227 3.492 -4.462 9.401 33.131 -1.927 0.267 3.355 16.003 7.596 34.683 24 EE_DC6DC7:DG33DG34_FF E 6 ? F 34 ? E 7 ? F 33 ? 1 C DC 7 1_555 D DG 20 1_555 C DA 8 1_555 D DT 19 1_555 1.277 0.070 3.206 4.622 -0.617 37.286 0.189 -1.378 3.333 -0.961 -7.194 37.566 25 EE_DC7DA8:DT32DG33_FF E 7 ? F 33 ? E 8 ? F 32 ? 1 C DA 8 1_555 D DT 19 1_555 C DA 9 1_555 D DT 18 1_555 -0.412 0.534 3.155 0.080 7.359 27.393 -0.586 0.859 3.186 15.194 -0.166 28.346 26 EE_DA8DA9:DT31DT32_FF E 8 ? F 32 ? E 9 ? F 31 ? 1 C DA 9 1_555 D DT 18 1_555 C DC 10 1_555 D DG 17 1_555 0.396 -0.798 3.111 3.160 1.228 36.777 -1.418 -0.219 3.106 1.941 -4.995 36.928 27 EE_DA9DC10:DG30DT31_FF E 9 ? F 31 ? E 10 ? F 30 ? 1 C DC 10 1_555 D DG 17 1_555 C DT 11 1_555 D DA 16 1_555 0.225 -0.720 3.722 -3.025 5.443 33.021 -2.242 -0.944 3.528 9.472 5.264 33.587 28 EE_DC10DT11:DA29DG30_FF E 10 ? F 30 ? E 11 ? F 29 ? 1 C DT 11 1_555 D DA 16 1_555 C DT 12 1_555 D DA 15 1_555 -0.403 -1.446 3.668 2.633 -7.750 34.742 -1.052 1.103 3.852 -12.760 -4.336 35.665 29 EE_DT11DT12:DA28DA29_FF E 11 ? F 29 ? E 12 ? F 28 ? 1 C DT 12 1_555 D DA 15 1_555 C DT 13 1_555 D DA 14 1_555 -0.105 -0.591 3.194 -1.207 -0.607 31.318 -0.982 -0.028 3.206 -1.124 2.235 31.346 30 EE_DT12DT13:DA27DA28_FF E 12 ? F 28 ? E 13 ? F 27 ? 1 C DT 13 1_555 D DA 14 1_555 D DT 1 1_555 D DA 13 1_555 -0.174 -0.017 3.111 3.561 4.625 31.266 -0.834 0.936 3.039 8.489 -6.536 31.793 31 EF_DT13DT14:DA26DA27_FF E 13 ? F 27 ? F 14 ? F 26 ? 1 D DT 1 1_555 D DA 13 1_555 D DT 2 1_555 D DA 12 1_555 -0.358 -0.234 3.600 0.101 -1.858 39.084 -0.103 0.548 3.606 -2.776 -0.150 39.126 32 FF_DT14DT15:DA25DA26_FF F 14 ? F 26 ? F 15 ? F 25 ? 1 D DT 2 1_555 D DA 12 1_555 D DT 3 1_555 D DA 11 1_555 -0.091 0.056 3.351 -1.434 -0.615 38.206 0.164 -0.045 3.350 -0.939 2.190 38.236 33 FF_DT15DT16:DA24DA25_FF F 15 ? F 25 ? F 16 ? F 24 ? 1 D DT 3 1_555 D DA 11 1_555 D DG 4 1_555 D DC 10 1_555 0.393 0.863 3.370 2.878 4.517 36.556 0.721 -0.211 3.468 7.153 -4.559 36.933 34 FF_DT16DG17:DC23DA24_FF F 16 ? F 24 ? F 17 ? F 23 ? 1 D DG 4 1_555 D DC 10 1_555 D DC 5 1_555 D DG 9 1_555 0.511 0.090 2.995 -3.880 1.931 32.374 -0.144 -1.519 2.916 3.444 6.921 32.655 35 FF_DG17DC18:DG22DC23_FF F 17 ? F 23 ? F 18 ? F 22 ? 1 D DC 5 1_555 D DG 9 1_555 D DG 6 1_555 D DA 8 1_555 1.877 2.151 2.943 -2.607 8.575 52.559 1.889 -2.249 3.143 9.604 2.920 53.264 36 FF_DC18DG19:DA21DG22_FF F 18 ? F 22 ? F 19 ? F 21 ? #