HEADER DNA BINDING PROTEIN/DNA 01-MAY-03 1P7D TITLE CRYSTAL STRUCTURE OF THE LAMBDA INTEGRASE (RESIDUES 75-356) TITLE 2 BOUND TO DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-D(*CP*AP*AP*TP*GP*CP*CP*AP*AP*CP*TP*TP*T)-3'; COMPND 3 CHAIN: C, E; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: 26-MER; COMPND 7 CHAIN: D, F; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: INTEGRASE; COMPND 11 CHAIN: A, B; COMPND 12 FRAGMENT: RESIDUES 75-356; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 MOL_ID: 2; SOURCE 4 SYNTHETIC: YES; SOURCE 5 MOL_ID: 3; SOURCE 6 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE LAMBDA; SOURCE 7 ORGANISM_TAXID: 10710; SOURCE 8 GENE: INT; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEIN-DNA COMPLEX, DNA BINDING PROTEIN/DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR H.AIHARA,H.J.KWON,S.E.NUNES-DUBY,A.LANDY,T.ELLENBERGER REVDAT 3 24-FEB-09 1P7D 1 VERSN REVDAT 2 28-NOV-06 1P7D 1 DBREF REVDAT 1 12-AUG-03 1P7D 0 JRNL AUTH H.AIHARA,H.J.KWON,S.E.NUNES-DUBY,A.LANDY, JRNL AUTH 2 T.ELLENBERGER JRNL TITL A CONFORMATIONAL SWITCH CONTROLS THE DNA CLEAVAGE JRNL TITL 2 ACTIVITY OF LAMBDA INTEGRASE JRNL REF MOL.CELL V. 12 187 2003 JRNL REFN ISSN 1097-2765 JRNL PMID 12887904 JRNL DOI 10.1016/S1097-2765(03)00268-5 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 2.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 19010 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.231 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 929 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.01 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.90 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.4000 REMARK 3 BIN FREE R VALUE : 0.4280 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 56 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4284 REMARK 3 NUCLEIC ACID ATOMS : 1600 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 58.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.29 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.187 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.087 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.991 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.304 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1P7D COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-MAY-03. REMARK 100 THE RCSB ID CODE IS RCSB019099. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-OCT-01 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X25 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.100 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRANDEIS - B4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : CCP4 (TRUNCATE) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19010 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.33800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: MLPHARE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, AMMONIUM SULFATE, SODIUM REMARK 280 CACODYLATE, PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 53.08050 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 117 REMARK 465 ASP A 118 REMARK 465 ILE A 119 REMARK 465 GLU B 117 REMARK 465 ASP B 118 REMARK 465 ILE B 119 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 75 OG1 CG2 REMARK 470 GLN A 94 CG CD OE1 NE2 REMARK 470 LYS A 122 CG CD CE NZ REMARK 470 ASP A 133 CG OD1 OD2 REMARK 470 ILE A 160 CG1 CG2 CD1 REMARK 470 LYS A 172 CG CD CE NZ REMARK 470 SER A 173 OG REMARK 470 GLN A 190 CG CD OE1 NE2 REMARK 470 GLU A 193 CG CD OE1 OE2 REMARK 470 GLU A 269 CG CD OE1 OE2 REMARK 470 ARG A 277 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 278 CG CD OE1 OE2 REMARK 470 ASP A 336 CG OD1 OD2 REMARK 470 THR A 337 OG1 CG2 REMARK 470 PTR A 342 O3P REMARK 470 MET B 74 CG SD CE REMARK 470 THR B 75 OG1 CG2 REMARK 470 SER B 78 OG REMARK 470 LYS B 85 CG CD CE NZ REMARK 470 THR B 120 OG1 CG2 REMARK 470 LYS B 122 CG CD CE NZ REMARK 470 GLU B 123 CG CD OE1 OE2 REMARK 470 ILE B 124 CG1 CG2 CD1 REMARK 470 ASP B 133 CG OD1 OD2 REMARK 470 LYS B 141 CG CD CE NZ REMARK 470 LEU B 147 CG CD1 CD2 REMARK 470 ARG B 152 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 157 CG CD OE1 OE2 REMARK 470 ILE B 160 CG1 CG2 CD1 REMARK 470 LYS B 172 CG CD CE NZ REMARK 470 SER B 173 OG REMARK 470 GLN B 190 CG CD OE1 NE2 REMARK 470 GLU B 193 CG CD OE1 OE2 REMARK 470 GLU B 269 CG CD OE1 OE2 REMARK 470 ARG B 277 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 278 CG CD OE1 OE2 REMARK 470 LYS B 325 CG CD CE NZ REMARK 470 ASP B 336 CG OD1 OD2 REMARK 470 THR B 337 OG1 CG2 REMARK 470 PTR B 342 O3P REMARK 470 LYS B 356 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DA D 28 O4' - C1' - N9 ANGL. DEV. = 2.6 DEGREES REMARK 500 DA F 28 O4' - C1' - N9 ANGL. DEV. = 2.7 DEGREES REMARK 500 DT F 32 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 89 -130.92 -83.52 REMARK 500 ARG A 90 -22.83 59.61 REMARK 500 ARG A 108 -71.46 -53.09 REMARK 500 PRO A 112 -164.84 -57.26 REMARK 500 ALA A 114 164.54 -45.83 REMARK 500 PRO A 115 -75.68 -85.10 REMARK 500 LYS A 136 59.18 -107.98 REMARK 500 HIS A 164 5.77 -57.89 REMARK 500 ALA A 245 5.08 -68.39 REMARK 500 HIS A 247 145.27 -173.46 REMARK 500 GLU A 264 -72.80 -65.78 REMARK 500 ARG A 277 28.71 43.93 REMARK 500 ILE A 322 -92.63 -135.15 REMARK 500 SER A 335 -35.73 -32.07 REMARK 500 MET A 338 36.64 -81.95 REMARK 500 SER A 340 129.31 46.79 REMARK 500 GLU A 354 -103.41 -27.78 REMARK 500 ILE A 355 74.55 121.86 REMARK 500 SER B 89 -116.70 -77.36 REMARK 500 ARG B 90 -24.10 49.47 REMARK 500 ARG B 109 -8.47 -57.33 REMARK 500 PRO B 112 -165.60 -58.07 REMARK 500 ALA B 114 164.37 -46.41 REMARK 500 PRO B 115 -75.83 -85.03 REMARK 500 LYS B 136 61.04 -109.05 REMARK 500 GLU B 157 3.35 -64.65 REMARK 500 ALA B 167 10.42 -64.24 REMARK 500 ALA B 245 5.11 -69.85 REMARK 500 HIS B 247 145.02 -173.63 REMARK 500 GLU B 264 -73.28 -65.04 REMARK 500 ARG B 276 40.02 -99.79 REMARK 500 ILE B 322 -92.08 -132.42 REMARK 500 ASP B 336 37.99 76.42 REMARK 500 THR B 337 -169.93 -106.73 REMARK 500 ALA B 339 -81.18 -53.09 REMARK 500 SER B 340 129.88 54.53 REMARK 500 TRP B 350 119.98 74.97 REMARK 500 GLU B 354 -97.19 -48.04 REMARK 500 ILE B 355 41.82 102.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 DC C 10 0.08 SIDE_CHAIN REMARK 500 DC E 10 0.08 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 999 REMARK 999 TRANSLATIONAL INITIATION DBREF 1P7D A 74 356 UNP P03700 VINT_LAMBD 74 356 DBREF 1P7D B 74 356 UNP P03700 VINT_LAMBD 74 356 DBREF 1P7D C 1 13 PDB 1P7D 1P7D 1 13 DBREF 1P7D D 14 39 PDB 1P7D 1P7D 14 39 DBREF 1P7D E 1 13 PDB 1P7D 1P7D 1 13 DBREF 1P7D F 14 39 PDB 1P7D 1P7D 14 39 SEQADV 1P7D MET A 74 UNP P03700 VAL 74 SEE REMARK 999 SEQADV 1P7D PTR A 342 UNP P03700 TYR 342 MODIFIED RESIDUE SEQADV 1P7D MET B 74 UNP P03700 VAL 74 SEE REMARK 999 SEQADV 1P7D PTR B 342 UNP P03700 TYR 342 MODIFIED RESIDUE SEQRES 1 C 13 DC DA DA DT DG DC DC DA DA DC DT DT DT SEQRES 1 D 26 DT DT DT DG DC DG DA DA DG DC DA DA DA SEQRES 2 D 26 DA DA DA DG DT DT DG DG DC DA DT DT DG SEQRES 1 E 13 DC DA DA DT DG DC DC DA DA DC DT DT DT SEQRES 1 F 26 DT DT DT DG DC DG DA DA DG DC DA DA DA SEQRES 2 F 26 DA DA DA DG DT DT DG DG DC DA DT DT DG SEQRES 1 A 283 MET THR LEU HIS SER TRP LEU ASP ARG TYR GLU LYS ILE SEQRES 2 A 283 LEU ALA SER ARG GLY ILE LYS GLN LYS THR LEU ILE ASN SEQRES 3 A 283 TYR MET SER LYS ILE LYS ALA ILE ARG ARG GLY LEU PRO SEQRES 4 A 283 ASP ALA PRO LEU GLU ASP ILE THR THR LYS GLU ILE ALA SEQRES 5 A 283 ALA MET LEU ASN GLY TYR ILE ASP GLU GLY LYS ALA ALA SEQRES 6 A 283 SER ALA LYS LEU ILE ARG SER THR LEU SER ASP ALA PHE SEQRES 7 A 283 ARG GLU ALA ILE ALA GLU GLY HIS ILE THR THR ASN HIS SEQRES 8 A 283 VAL ALA ALA THR ARG ALA ALA LYS SER GLU VAL ARG ARG SEQRES 9 A 283 SER ARG LEU THR ALA ASP GLU TYR LEU LYS ILE TYR GLN SEQRES 10 A 283 ALA ALA GLU SER SER PRO CYS TRP LEU ARG LEU ALA MET SEQRES 11 A 283 GLU LEU ALA VAL VAL THR GLY GLN ARG VAL GLY ASP LEU SEQRES 12 A 283 CYS GLU MET LYS TRP SER ASP ILE VAL ASP GLY TYR LEU SEQRES 13 A 283 TYR VAL GLU GLN SER LYS THR GLY VAL LYS ILE ALA ILE SEQRES 14 A 283 PRO THR ALA LEU HIS ILE ASP ALA LEU GLY ILE SER MET SEQRES 15 A 283 LYS GLU THR LEU ASP LYS CYS LYS GLU ILE LEU GLY GLY SEQRES 16 A 283 GLU THR ILE ILE ALA SER THR ARG ARG GLU PRO LEU SER SEQRES 17 A 283 SER GLY THR VAL SER ARG TYR PHE MET ARG ALA ARG LYS SEQRES 18 A 283 ALA SER GLY LEU SER PHE GLU GLY ASP PRO PRO THR PHE SEQRES 19 A 283 HIS GLU LEU ARG SER LEU SER ALA ARG LEU TYR GLU LYS SEQRES 20 A 283 GLN ILE SER ASP LYS PHE ALA GLN HIS LEU LEU GLY HIS SEQRES 21 A 283 LYS SER ASP THR MET ALA SER GLN PTR ARG ASP ASP ARG SEQRES 22 A 283 GLY ARG GLU TRP ASP LYS ILE GLU ILE LYS SEQRES 1 B 283 MET THR LEU HIS SER TRP LEU ASP ARG TYR GLU LYS ILE SEQRES 2 B 283 LEU ALA SER ARG GLY ILE LYS GLN LYS THR LEU ILE ASN SEQRES 3 B 283 TYR MET SER LYS ILE LYS ALA ILE ARG ARG GLY LEU PRO SEQRES 4 B 283 ASP ALA PRO LEU GLU ASP ILE THR THR LYS GLU ILE ALA SEQRES 5 B 283 ALA MET LEU ASN GLY TYR ILE ASP GLU GLY LYS ALA ALA SEQRES 6 B 283 SER ALA LYS LEU ILE ARG SER THR LEU SER ASP ALA PHE SEQRES 7 B 283 ARG GLU ALA ILE ALA GLU GLY HIS ILE THR THR ASN HIS SEQRES 8 B 283 VAL ALA ALA THR ARG ALA ALA LYS SER GLU VAL ARG ARG SEQRES 9 B 283 SER ARG LEU THR ALA ASP GLU TYR LEU LYS ILE TYR GLN SEQRES 10 B 283 ALA ALA GLU SER SER PRO CYS TRP LEU ARG LEU ALA MET SEQRES 11 B 283 GLU LEU ALA VAL VAL THR GLY GLN ARG VAL GLY ASP LEU SEQRES 12 B 283 CYS GLU MET LYS TRP SER ASP ILE VAL ASP GLY TYR LEU SEQRES 13 B 283 TYR VAL GLU GLN SER LYS THR GLY VAL LYS ILE ALA ILE SEQRES 14 B 283 PRO THR ALA LEU HIS ILE ASP ALA LEU GLY ILE SER MET SEQRES 15 B 283 LYS GLU THR LEU ASP LYS CYS LYS GLU ILE LEU GLY GLY SEQRES 16 B 283 GLU THR ILE ILE ALA SER THR ARG ARG GLU PRO LEU SER SEQRES 17 B 283 SER GLY THR VAL SER ARG TYR PHE MET ARG ALA ARG LYS SEQRES 18 B 283 ALA SER GLY LEU SER PHE GLU GLY ASP PRO PRO THR PHE SEQRES 19 B 283 HIS GLU LEU ARG SER LEU SER ALA ARG LEU TYR GLU LYS SEQRES 20 B 283 GLN ILE SER ASP LYS PHE ALA GLN HIS LEU LEU GLY HIS SEQRES 21 B 283 LYS SER ASP THR MET ALA SER GLN PTR ARG ASP ASP ARG SEQRES 22 B 283 GLY ARG GLU TRP ASP LYS ILE GLU ILE LYS MODRES 1P7D PTR A 342 TYR O-PHOSPHOTYROSINE MODRES 1P7D PTR B 342 TYR O-PHOSPHOTYROSINE HET PTR A 342 15 HET PTR B 342 15 HETNAM PTR O-PHOSPHOTYROSINE HETSYN PTR PHOSPHONOTYROSINE FORMUL 5 PTR 2(C9 H12 N O6 P) HELIX 1 1 THR A 75 ALA A 88 1 14 HELIX 2 2 LYS A 93 LEU A 111 1 19 HELIX 3 3 THR A 120 GLU A 134 1 15 HELIX 4 4 LYS A 136 GLU A 157 1 22 HELIX 5 5 THR A 181 ALA A 192 1 12 HELIX 6 6 GLU A 193 SER A 195 5 3 HELIX 7 7 PRO A 196 GLY A 210 1 15 HELIX 8 8 ARG A 212 CYS A 217 1 6 HELIX 9 9 LYS A 220 ILE A 224 5 5 HELIX 10 10 MET A 255 LEU A 266 1 12 HELIX 11 11 SER A 281 GLY A 297 1 17 HELIX 12 12 HIS A 308 ILE A 322 1 15 HELIX 13 13 SER A 323 GLY A 332 1 10 HELIX 14 14 THR B 75 SER B 89 1 15 HELIX 15 15 LYS B 93 LEU B 111 1 19 HELIX 16 16 THR B 120 GLU B 134 1 15 HELIX 17 17 LYS B 136 GLU B 157 1 22 HELIX 18 18 THR B 181 ALA B 192 1 12 HELIX 19 19 GLU B 193 SER B 195 5 3 HELIX 20 20 PRO B 196 GLY B 210 1 15 HELIX 21 21 ARG B 212 CYS B 217 1 6 HELIX 22 22 LYS B 220 ILE B 224 5 5 HELIX 23 23 MET B 255 LEU B 266 1 12 HELIX 24 24 SER B 281 GLY B 297 1 17 HELIX 25 25 HIS B 308 ILE B 322 1 15 HELIX 26 26 SER B 323 GLY B 332 1 10 SHEET 1 A 2 TYR A 228 GLU A 232 0 SHEET 2 A 2 LYS A 239 PRO A 243 -1 O ILE A 242 N LEU A 229 SHEET 1 B 2 HIS A 247 ILE A 248 0 SHEET 2 B 2 ILE A 253 SER A 254 -1 O ILE A 253 N ILE A 248 SHEET 1 C 3 ASP A 351 LYS A 352 0 SHEET 2 C 3 LYS B 239 PRO B 243 1 O ALA B 241 N ASP A 351 SHEET 3 C 3 TYR B 228 GLU B 232 -1 N LEU B 229 O ILE B 242 SHEET 1 D 2 HIS B 247 ILE B 248 0 SHEET 2 D 2 ILE B 253 SER B 254 -1 O ILE B 253 N ILE B 248 LINK O3' DT C 13 P PTR A 342 1555 1555 1.61 LINK O3' DT E 13 P PTR B 342 1555 1555 1.60 LINK C GLN A 341 N PTR A 342 1555 1555 1.33 LINK C PTR A 342 N ARG A 343 1555 1555 1.33 LINK C GLN B 341 N PTR B 342 1555 1555 1.33 LINK C PTR B 342 N ARG B 343 1555 1555 1.33 CRYST1 59.021 106.161 73.165 90.00 92.10 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016943 0.000000 0.000621 0.00000 SCALE2 0.000000 0.009420 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013677 0.00000