HEADER TRANSFERASE 06-MAY-03 1P89 TITLE SUBSTRATE-INDUCED STRUCTURAL CHANGES TO THE ISOLATED N-TERMINAL DOMAIN TITLE 2 OF 5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE SYNTHASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: N-TERMINAL DOMAIN (25-240); COMPND 5 SYNONYM: 5- ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE SYNTHASE, EPSP SYNTHASE, COMPND 6 EPSPS; COMPND 7 EC: 2.5.1.19; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83334; SOURCE 4 STRAIN: O157:H7; SOURCE 5 GENE: AROA OR B0908 OR Z1254 OR ECS0991; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS S3P, EPSP SYNTHASE, STRUCTURE FROM MOLMOL, TRANSFERASE EXPDTA SOLUTION NMR NUMMDL 11 MDLTYP MINIMIZED AVERAGE AUTHOR J.K.YOUNG,M.E.STAUFFER,H.J.KIM,G.L.HELMS,J.N.S.EVANS REVDAT 4 01-MAY-24 1P89 1 REMARK REVDAT 3 13-JUL-11 1P89 1 VERSN REVDAT 2 24-FEB-09 1P89 1 VERSN REVDAT 1 02-NOV-04 1P89 0 JRNL AUTH J.K.YOUNG,M.E.STAUFFER,H.J.KIM,G.L.HELMS,J.N.S.EVANS JRNL TITL SUBSTRATE-INDUCED STRUCTURAL CHANGES TO THE ISOLATED JRNL TITL 2 N-TERMINAL DOMAIN OF 5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE JRNL TITL 3 SYNTHASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1P89 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-MAY-03. REMARK 100 THE DEPOSITION ID IS D_1000019131. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CNS 1.1 REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 10 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 11 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH ACCEPTABLE REMARK 210 COVALENT GEOMETRY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H VAL A 162 O VAL A 188 1.52 REMARK 500 O ILE A 189 H PHE A 223 1.52 REMARK 500 H LEU A 115 O LEU A 151 1.58 REMARK 500 O ILE A 113 H LEU A 153 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LEU A 82 93.95 -63.36 REMARK 500 1 ASN A 94 51.70 -96.90 REMARK 500 1 ALA A 95 -73.71 -88.75 REMARK 500 1 SER A 110 102.47 -162.37 REMARK 500 1 GLU A 144 -67.59 -129.53 REMARK 500 1 PRO A 150 95.18 -61.41 REMARK 500 1 GLN A 154 22.77 -146.17 REMARK 500 1 SER A 167 160.97 -48.35 REMARK 500 1 VAL A 168 59.59 71.73 REMARK 500 1 SER A 169 154.03 60.81 REMARK 500 1 LYS A 192 -80.97 -59.09 REMARK 500 1 GLN A 218 -166.35 -66.85 REMARK 500 1 HIS A 219 49.16 -74.29 REMARK 500 1 SER A 230 103.25 -176.60 REMARK 500 1 VAL A 239 -73.59 -56.78 REMARK 500 2 SER A 47 -159.83 -124.80 REMARK 500 2 LEU A 82 90.68 -69.78 REMARK 500 2 ASN A 94 50.58 -92.04 REMARK 500 2 ALA A 95 -73.79 -92.34 REMARK 500 2 SER A 110 94.18 -167.90 REMARK 500 2 GLU A 144 -71.79 -142.98 REMARK 500 2 GLN A 154 27.22 -142.91 REMARK 500 2 SER A 167 164.04 -49.14 REMARK 500 2 VAL A 168 56.53 70.73 REMARK 500 2 SER A 169 156.44 59.25 REMARK 500 2 LYS A 192 -81.23 -57.15 REMARK 500 2 GLN A 218 -166.64 -65.33 REMARK 500 2 HIS A 219 49.02 -73.37 REMARK 500 2 TYR A 220 19.81 57.48 REMARK 500 2 SER A 230 105.03 -174.50 REMARK 500 2 VAL A 239 -75.81 -61.50 REMARK 500 3 SER A 47 -162.69 -115.87 REMARK 500 3 LEU A 82 90.56 -66.89 REMARK 500 3 ASN A 94 51.58 -94.05 REMARK 500 3 ALA A 95 -73.13 -90.15 REMARK 500 3 SER A 110 100.86 -166.93 REMARK 500 3 GLU A 144 -73.80 -142.00 REMARK 500 3 GLN A 154 22.66 -149.44 REMARK 500 3 SER A 167 163.15 -49.80 REMARK 500 3 VAL A 168 61.10 71.27 REMARK 500 3 SER A 169 156.44 54.56 REMARK 500 3 LYS A 192 -81.05 -59.33 REMARK 500 3 GLN A 218 -168.14 -66.77 REMARK 500 3 HIS A 219 48.42 -74.37 REMARK 500 3 SER A 230 104.75 -175.87 REMARK 500 3 VAL A 239 -71.46 -58.90 REMARK 500 4 SER A 47 -162.41 -128.31 REMARK 500 4 LEU A 82 90.03 -64.62 REMARK 500 4 ASN A 94 55.18 -104.47 REMARK 500 4 ALA A 95 -66.35 -98.65 REMARK 500 REMARK 500 THIS ENTRY HAS 171 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1P88 RELATED DB: PDB REMARK 900 N-TERMINAL DOMAIN OF EPSP SYNTHASE DBREF 1P89 A 25 240 UNP P0A6D3 AROA_ECOLI 25 240 SEQRES 1 A 216 SER ASN ARG ALA LEU LEU LEU ALA ALA LEU ALA HIS GLY SEQRES 2 A 216 LYS THR VAL LEU THR ASN LEU LEU ASP SER ASP ASP VAL SEQRES 3 A 216 ARG HIS MET LEU ASN ALA LEU THR ALA LEU GLY VAL SER SEQRES 4 A 216 TYR THR LEU SER ALA ASP ARG THR ARG CYS GLU ILE ILE SEQRES 5 A 216 GLY ASN GLY GLY PRO LEU HIS ALA GLU GLY ALA LEU GLU SEQRES 6 A 216 LEU PHE LEU GLY ASN ALA GLY THR ALA MET ARG PRO LEU SEQRES 7 A 216 ALA ALA ALA LEU CYS LEU GLY SER ASN ASP ILE VAL LEU SEQRES 8 A 216 THR GLY GLU PRO ARG MET LYS GLU ARG PRO ILE GLY HIS SEQRES 9 A 216 LEU VAL ASP ALA LEU ARG LEU GLY GLY ALA LYS ILE THR SEQRES 10 A 216 TYR LEU GLU GLN GLU ASN TYR PRO PRO LEU ARG LEU GLN SEQRES 11 A 216 GLY GLY PHE THR GLY GLY ASN VAL ASP VAL ASP GLY SER SEQRES 12 A 216 VAL SER SER GLN PHE LEU THR ALA LEU LEU MET THR ALA SEQRES 13 A 216 PRO LEU ALA PRO GLU ASP THR VAL ILE ARG ILE LYS GLY SEQRES 14 A 216 ASP LEU VAL SER LYS PRO TYR ILE ASP ILE THR LEU ASN SEQRES 15 A 216 LEU MET LYS THR PHE GLY VAL GLU ILE GLU ASN GLN HIS SEQRES 16 A 216 TYR GLN GLN PHE VAL VAL LYS GLY GLY GLN SER TYR GLN SEQRES 17 A 216 SER PRO GLY THR TYR LEU VAL GLU HELIX 1 1 SER A 25 ALA A 35 1 11 HELIX 2 2 SER A 47 GLY A 61 1 15 HELIX 3 3 ALA A 98 CYS A 107 1 10 HELIX 4 4 ARG A 120 ARG A 124 5 5 HELIX 5 5 ILE A 126 GLY A 137 1 12 HELIX 6 6 SER A 170 ALA A 180 1 11 HELIX 7 7 PRO A 181 ALA A 183 5 3 HELIX 8 8 SER A 197 GLY A 212 1 16 SHEET 1 A 3 ARG A 72 ILE A 75 0 SHEET 2 A 3 THR A 39 THR A 42 -1 N LEU A 41 O CYS A 73 SHEET 3 A 3 THR A 236 LEU A 238 1 O TYR A 237 N VAL A 40 SHEET 1 B 3 GLU A 85 PHE A 91 0 SHEET 2 B 3 ASP A 112 THR A 116 1 O VAL A 114 N LEU A 88 SHEET 3 B 3 LEU A 151 LEU A 153 -1 O LEU A 153 N ILE A 113 SHEET 1 C 4 GLY A 160 VAL A 164 0 SHEET 2 C 4 THR A 187 ILE A 191 1 O VAL A 188 N VAL A 162 SHEET 3 C 4 GLN A 222 VAL A 225 -1 O PHE A 223 N ILE A 189 SHEET 4 C 4 GLU A 216 ASN A 217 -1 N GLU A 216 O VAL A 224 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1