data_1P9V # _entry.id 1P9V # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1P9V RCSB RCSB019189 WWPDB D_1000019189 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2004-02-24 _pdbx_database_PDB_obs_spr.pdb_id 1SDJ _pdbx_database_PDB_obs_spr.replace_pdb_id 1P9V _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.status_code OBS _pdbx_database_status.entry_id 1P9V _pdbx_database_status.recvd_initial_deposition_date 2003-05-12 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kuzin, A.P.' 1 'Edstrom, W.' 2 'Skarina, T.' 3 'Korniyenko, Y.' 4 'Savchenko, A.' 5 'Tong, L.' 6 # _citation.id primary _citation.title 'X-ray structure of YDEE_ECOLI northeast structural genomics consortium target ET25' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Kuzin, A.P.' 1 primary 'Edstrom, W.' 2 primary 'Skarina, T.' 3 primary 'Korniyenko, Y.' 4 primary 'Savchenko, A.' 5 primary 'Tong, L.' 6 # _cell.entry_id 1P9V _cell.length_a 125.047 _cell.length_b 130.659 _cell.length_c 48.555 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1P9V _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Hypothetical protein yddE' 34074.613 1 ? ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 5 ? ? ? ? 3 water nat water 18.015 144 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ORFB # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 GLY n 1 3 ARG n 1 4 GLU n 1 5 ASN n 1 6 LEU n 1 7 TYR n 1 8 PHE n 1 9 GLN n 1 10 GLY n 1 11 HIS n 1 12 MSE n 1 13 LYS n 1 14 PRO n 1 15 GLN n 1 16 VAL n 1 17 TYR n 1 18 HIS n 1 19 VAL n 1 20 ASP n 1 21 ALA n 1 22 PHE n 1 23 THR n 1 24 SER n 1 25 GLN n 1 26 PRO n 1 27 PHE n 1 28 ARG n 1 29 GLY n 1 30 ASN n 1 31 SER n 1 32 ALA n 1 33 GLY n 1 34 VAL n 1 35 VAL n 1 36 PHE n 1 37 PRO n 1 38 ALA n 1 39 ASP n 1 40 ASN n 1 41 LEU n 1 42 SER n 1 43 GLU n 1 44 ALA n 1 45 GLN n 1 46 MSE n 1 47 GLN n 1 48 LEU n 1 49 ILE n 1 50 ALA n 1 51 ARG n 1 52 GLU n 1 53 LEU n 1 54 GLY n 1 55 HIS n 1 56 SER n 1 57 GLU n 1 58 THR n 1 59 ALA n 1 60 PHE n 1 61 LEU n 1 62 LEU n 1 63 HIS n 1 64 SER n 1 65 ASP n 1 66 ASP n 1 67 SER n 1 68 ASP n 1 69 VAL n 1 70 ARG n 1 71 ILE n 1 72 ARG n 1 73 TYR n 1 74 PHE n 1 75 THR n 1 76 PRO n 1 77 THR n 1 78 VAL n 1 79 GLU n 1 80 VAL n 1 81 PRO n 1 82 ILE n 1 83 CYS n 1 84 GLY n 1 85 HIS n 1 86 ALA n 1 87 THR n 1 88 VAL n 1 89 ALA n 1 90 ALA n 1 91 HIS n 1 92 TYR n 1 93 VAL n 1 94 ARG n 1 95 ALA n 1 96 LYS n 1 97 VAL n 1 98 LEU n 1 99 GLY n 1 100 LEU n 1 101 GLY n 1 102 ASN n 1 103 CYS n 1 104 THR n 1 105 ILE n 1 106 TRP n 1 107 GLN n 1 108 THR n 1 109 SER n 1 110 LEU n 1 111 ALA n 1 112 GLY n 1 113 LYS n 1 114 HIS n 1 115 ARG n 1 116 VAL n 1 117 THR n 1 118 ILE n 1 119 GLU n 1 120 LYS n 1 121 HIS n 1 122 ASN n 1 123 ASP n 1 124 ASP n 1 125 TYR n 1 126 ARG n 1 127 ILE n 1 128 SER n 1 129 LEU n 1 130 GLU n 1 131 GLN n 1 132 GLY n 1 133 THR n 1 134 PRO n 1 135 GLY n 1 136 PHE n 1 137 GLU n 1 138 PRO n 1 139 PRO n 1 140 LEU n 1 141 GLU n 1 142 GLY n 1 143 GLU n 1 144 THR n 1 145 ARG n 1 146 ALA n 1 147 ALA n 1 148 ILE n 1 149 ILE n 1 150 ASN n 1 151 ALA n 1 152 LEU n 1 153 HIS n 1 154 LEU n 1 155 THR n 1 156 GLU n 1 157 ASP n 1 158 ASP n 1 159 ILE n 1 160 LEU n 1 161 PRO n 1 162 GLY n 1 163 LEU n 1 164 PRO n 1 165 ILE n 1 166 GLN n 1 167 VAL n 1 168 ALA n 1 169 THR n 1 170 THR n 1 171 GLY n 1 172 HIS n 1 173 SER n 1 174 LYS n 1 175 VAL n 1 176 MSE n 1 177 ILE n 1 178 PRO n 1 179 LEU n 1 180 LYS n 1 181 PRO n 1 182 GLU n 1 183 VAL n 1 184 ASP n 1 185 ILE n 1 186 ASP n 1 187 ALA n 1 188 LEU n 1 189 SER n 1 190 PRO n 1 191 ASP n 1 192 LEU n 1 193 ASN n 1 194 ALA n 1 195 LEU n 1 196 THR n 1 197 ALA n 1 198 ILE n 1 199 SER n 1 200 LYS n 1 201 LYS n 1 202 ILE n 1 203 GLY n 1 204 CYS n 1 205 ASN n 1 206 GLY n 1 207 PHE n 1 208 PHE n 1 209 PRO n 1 210 PHE n 1 211 GLN n 1 212 ILE n 1 213 ARG n 1 214 PRO n 1 215 GLY n 1 216 LYS n 1 217 ASN n 1 218 GLU n 1 219 THR n 1 220 ASP n 1 221 GLY n 1 222 ARG n 1 223 MSE n 1 224 PHE n 1 225 SER n 1 226 PRO n 1 227 ALA n 1 228 ILE n 1 229 GLY n 1 230 ILE n 1 231 VAL n 1 232 GLU n 1 233 ASP n 1 234 PRO n 1 235 VAL n 1 236 THR n 1 237 GLY n 1 238 ASN n 1 239 ALA n 1 240 ASN n 1 241 GLY n 1 242 PRO n 1 243 MSE n 1 244 GLY n 1 245 ALA n 1 246 TRP n 1 247 LEU n 1 248 VAL n 1 249 HIS n 1 250 HIS n 1 251 ASN n 1 252 VAL n 1 253 LEU n 1 254 PRO n 1 255 HIS n 1 256 ASP n 1 257 GLY n 1 258 ASN n 1 259 VAL n 1 260 LEU n 1 261 ARG n 1 262 VAL n 1 263 LYS n 1 264 GLY n 1 265 HIS n 1 266 GLN n 1 267 GLY n 1 268 ARG n 1 269 ALA n 1 270 LEU n 1 271 GLY n 1 272 ARG n 1 273 ASP n 1 274 GLY n 1 275 MSE n 1 276 ILE n 1 277 GLU n 1 278 VAL n 1 279 THR n 1 280 VAL n 1 281 THR n 1 282 ILE n 1 283 ARG n 1 284 ASP n 1 285 ASN n 1 286 GLN n 1 287 PRO n 1 288 GLU n 1 289 LYS n 1 290 VAL n 1 291 THR n 1 292 ILE n 1 293 SER n 1 294 GLY n 1 295 THR n 1 296 ALA n 1 297 VAL n 1 298 ILE n 1 299 LEU n 1 300 PHE n 1 301 HIS n 1 302 ALA n 1 303 GLU n 1 304 TRP n 1 305 ALA n 1 306 ILE n 1 307 GLU n 1 308 LEU n 1 309 GLY n 1 310 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name bacteria _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene YDDE _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id ? _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name bacteria _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET15 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name SWS _struct_ref.db_code YDDE_ECOLI _struct_ref.pdbx_db_accession P37757 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KPQVYHVDAFTSQPFRGNSAGVVFPADNLSEAQMQLIARELGHSETAFLLHSDDSDVRIRYFTPTVEVPICGHATVAAHY VRAKVLGLGNCTIWQTSLAGKHRVTIEKHNDDYRISLEQGTPGFEPPLEGETRAAIINALHLTEDDILPGLPIQVATTGH SKVMIPLKPEVDIDALSPDLNALTAISKKIGCNGFFPFQIRPGKNETDGRMFSPAIGIVEDPVTGNANGPMGAWLVHHNV LPHDGNVLRVKGHQGRALGRDGMIEVTVTIRDNQPEKVTISGTAVILFHAEWAIEL ; _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1P9V _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 13 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 308 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P37757 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 297 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 14 _struct_ref_seq.pdbx_auth_seq_align_end 309 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1P9V SER A 1 ? SWS P37757 ? ? 'HIS TAG' 2 1 1 1P9V GLY A 2 ? SWS P37757 ? ? 'HIS TAG' 3 2 1 1P9V ARG A 3 ? SWS P37757 ? ? 'HIS TAG' 4 3 1 1P9V GLU A 4 ? SWS P37757 ? ? 'HIS TAG' 5 4 1 1P9V ASN A 5 ? SWS P37757 ? ? 'HIS TAG' 6 5 1 1P9V LEU A 6 ? SWS P37757 ? ? 'HIS TAG' 7 6 1 1P9V TYR A 7 ? SWS P37757 ? ? 'HIS TAG' 8 7 1 1P9V PHE A 8 ? SWS P37757 ? ? 'HIS TAG' 9 8 1 1P9V GLN A 9 ? SWS P37757 ? ? 'HIS TAG' 10 9 1 1P9V GLY A 10 ? SWS P37757 ? ? 'HIS TAG' 11 10 1 1P9V HIS A 11 ? SWS P37757 ? ? 'HIS TAG' 12 11 1 1P9V MSE A 12 ? SWS P37757 ? ? 'HIS TAG' 13 12 1 1P9V MSE A 46 ? SWS P37757 MET 35 'MODIFIED RESIDUE' 47 13 1 1P9V MSE A 176 ? SWS P37757 MET 165 'MODIFIED RESIDUE' 177 14 1 1P9V MSE A 223 ? SWS P37757 MET 212 'MODIFIED RESIDUE' 224 15 1 1P9V MSE A 243 ? SWS P37757 MET 232 'MODIFIED RESIDUE' 244 16 1 1P9V MSE A 275 ? SWS P37757 MET 264 'MODIFIED RESIDUE' 276 17 1 1P9V GLY A 309 ? SWS P37757 ? ? 'HIS TAG' 310 18 1 1P9V SER A 310 ? SWS P37757 ? ? 'HIS TAG' 311 19 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1P9V _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.91 _exptl_crystal.density_percent_sol 57.74 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp 259 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_details 'ammonium sulfate, isopropanol, VAPOR DIFFUSION, temperature 259K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2003-02-11 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9793 1.0 2 0.9797 1.0 3 0.9770 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.9793, 0.9797, 0.9770' # _reflns.entry_id 1P9V _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.0 _reflns.d_resolution_high 1.7 _reflns.number_obs 40580 _reflns.number_all ? _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.B_iso_Wilson_estimate 37.6 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_netI_over_sigmaI ? # _refine.entry_id 1P9V _refine.ls_number_reflns_obs 30515 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF 591533.10 _refine.pdbx_data_cutoff_low_absF 0.0 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.87 _refine.ls_d_res_high 2.30 _refine.ls_percent_reflns_obs 89.5 _refine.ls_R_factor_obs 0.218 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.218 _refine.ls_R_factor_R_free 0.26 _refine.ls_R_factor_R_free_error 0.007 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1554 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 33.7 _refine.aniso_B[1][1] 1.92 _refine.aniso_B[2][2] 0.82 _refine.aniso_B[3][3] -2.74 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.333235 _refine.solvent_model_param_bsol 38.7607 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1P9V _refine_analyze.Luzzati_coordinate_error_obs 0.29 _refine_analyze.Luzzati_sigma_a_obs 0.27 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.36 _refine_analyze.Luzzati_sigma_a_free 0.39 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2379 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 25 _refine_hist.number_atoms_solvent 144 _refine_hist.number_atoms_total 2548 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 19.87 _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.4 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 24.8 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.01 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.30 _refine_ls_shell.d_res_low 2.44 _refine_ls_shell.number_reflns_R_work 3973 _refine_ls_shell.R_factor_R_work 0.271 _refine_ls_shell.percent_reflns_obs 73.0 _refine_ls_shell.R_factor_R_free 0.317 _refine_ls_shell.R_factor_R_free_error 0.023 _refine_ls_shell.percent_reflns_R_free 4.7 _refine_ls_shell.number_reflns_R_free 196 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 4 ION.PARAM ION.TOP 'X-RAY DIFFRACTION' # _struct.entry_id 1P9V _struct.title 'X-RAY STRUCTURE OF YDDE_ECOLI NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET ET25.' _struct.pdbx_descriptor 'Hypothetical protein yddE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1P9V _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text 'UNKNOWN FUNCTION, STRUCTURAL GENOMICS' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 3 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 1 ? GLN A 9 ? SER A 2 GLN A 10 1 ? 9 HELX_P HELX_P2 2 SER A 42 ? GLY A 54 ? SER A 43 GLY A 55 1 ? 13 HELX_P HELX_P3 3 CYS A 83 ? GLY A 99 ? CYS A 84 GLY A 100 1 ? 17 HELX_P HELX_P4 4 GLU A 141 ? LEU A 152 ? GLU A 142 LEU A 153 1 ? 12 HELX_P HELX_P5 5 THR A 155 ? ILE A 159 ? THR A 156 ILE A 160 5 ? 5 HELX_P HELX_P6 6 ASP A 191 ? GLY A 203 ? ASP A 192 GLY A 204 1 ? 13 HELX_P HELX_P7 7 THR A 236 ? HIS A 250 ? THR A 237 HIS A 251 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PHE _struct_mon_prot_cis.label_seq_id 36 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PHE _struct_mon_prot_cis.auth_seq_id 37 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 37 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 38 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.49 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 13 ? B ? 6 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? parallel A 9 10 ? anti-parallel A 10 11 ? parallel A 11 12 ? anti-parallel A 12 13 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 79 ? VAL A 80 ? GLU A 80 VAL A 81 A 2 VAL A 69 ? PHE A 74 ? VAL A 70 PHE A 75 A 3 CYS A 103 ? SER A 109 ? CYS A 104 SER A 110 A 4 GLY A 112 ? HIS A 121 ? GLY A 113 HIS A 122 A 5 ASP A 124 ? GLY A 132 ? ASP A 125 GLY A 133 A 6 GLN A 286 ? GLY A 294 ? GLN A 287 GLY A 295 A 7 GLY A 274 ? ARG A 283 ? GLY A 275 ARG A 284 A 8 VAL A 259 ? GLN A 266 ? VAL A 260 GLN A 267 A 9 GLU A 218 ? GLY A 221 ? GLU A 219 GLY A 222 A 10 PHE A 207 ? ILE A 212 ? PHE A 208 ILE A 213 A 11 LYS A 174 ? PRO A 178 ? LYS A 175 PRO A 179 A 12 GLN A 166 ? THR A 169 ? GLN A 167 THR A 170 A 13 GLY A 135 ? PHE A 136 ? GLY A 136 PHE A 137 B 1 GLU A 79 ? VAL A 80 ? GLU A 80 VAL A 81 B 2 VAL A 69 ? PHE A 74 ? VAL A 70 PHE A 75 B 3 THR A 58 ? LEU A 62 ? THR A 59 LEU A 63 B 4 ASN A 30 ? PHE A 36 ? ASN A 31 PHE A 37 B 5 GLN A 15 ? ALA A 21 ? GLN A 16 ALA A 22 B 6 ALA A 296 ? GLU A 303 ? ALA A 297 GLU A 304 C 1 MSE A 223 ? PHE A 224 ? MSE A 224 PHE A 225 C 2 GLU A 232 ? ASP A 233 ? GLU A 233 ASP A 234 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 80 ? O VAL A 81 N TYR A 73 ? N TYR A 74 A 2 3 N VAL A 69 ? N VAL A 70 O THR A 108 ? O THR A 109 A 3 4 N ILE A 105 ? N ILE A 106 O VAL A 116 ? O VAL A 117 A 4 5 N THR A 117 ? N THR A 118 O SER A 128 ? O SER A 129 A 5 6 N LEU A 129 ? N LEU A 130 O ILE A 292 ? O ILE A 293 A 6 7 O SER A 293 ? O SER A 294 N GLU A 277 ? N GLU A 278 A 7 8 O VAL A 278 ? O VAL A 279 N VAL A 262 ? N VAL A 263 A 8 9 O HIS A 265 ? O HIS A 266 N THR A 219 ? N THR A 220 A 9 10 O ASP A 220 ? O ASP A 221 N GLN A 211 ? N GLN A 212 A 10 11 O PHE A 208 ? O PHE A 209 N VAL A 175 ? N VAL A 176 A 11 12 O MSE A 176 ? O MSE A 177 N GLN A 166 ? N GLN A 167 A 12 13 O THR A 169 ? O THR A 170 N GLY A 135 ? N GLY A 136 B 1 2 O VAL A 80 ? O VAL A 81 N TYR A 73 ? N TYR A 74 B 2 3 O ARG A 70 ? O ARG A 71 N LEU A 62 ? N LEU A 63 B 3 4 O ALA A 59 ? O ALA A 60 N GLY A 33 ? N GLY A 34 B 4 5 O ASN A 30 ? O ASN A 31 N ALA A 21 ? N ALA A 22 B 5 6 N HIS A 18 ? N HIS A 19 O LEU A 299 ? O LEU A 300 C 1 2 N MSE A 223 ? N MSE A 224 O ASP A 233 ? O ASP A 234 # _database_PDB_matrix.entry_id 1P9V _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1P9V _atom_sites.fract_transf_matrix[1][1] 0.007997 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007654 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020595 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 2 2 SER SER A . n A 1 2 GLY 2 3 3 GLY GLY A . n A 1 3 ARG 3 4 4 ARG ARG A . n A 1 4 GLU 4 5 5 GLU GLU A . n A 1 5 ASN 5 6 6 ASN ASN A . n A 1 6 LEU 6 7 7 LEU LEU A . n A 1 7 TYR 7 8 8 TYR TYR A . n A 1 8 PHE 8 9 9 PHE PHE A . n A 1 9 GLN 9 10 10 GLN GLN A . n A 1 10 GLY 10 11 11 GLY GLY A . n A 1 11 HIS 11 12 12 HIS HIS A . n A 1 12 MSE 12 13 13 MSE MSE A . n A 1 13 LYS 13 14 14 LYS LYS A . n A 1 14 PRO 14 15 15 PRO PRO A . n A 1 15 GLN 15 16 16 GLN GLN A . n A 1 16 VAL 16 17 17 VAL VAL A . n A 1 17 TYR 17 18 18 TYR TYR A . n A 1 18 HIS 18 19 19 HIS HIS A . n A 1 19 VAL 19 20 20 VAL VAL A . n A 1 20 ASP 20 21 21 ASP ASP A . n A 1 21 ALA 21 22 22 ALA ALA A . n A 1 22 PHE 22 23 23 PHE PHE A . n A 1 23 THR 23 24 24 THR THR A . n A 1 24 SER 24 25 25 SER SER A . n A 1 25 GLN 25 26 26 GLN GLN A . n A 1 26 PRO 26 27 27 PRO PRO A . n A 1 27 PHE 27 28 28 PHE PHE A . n A 1 28 ARG 28 29 29 ARG ARG A . n A 1 29 GLY 29 30 30 GLY GLY A . n A 1 30 ASN 30 31 31 ASN ASN A . n A 1 31 SER 31 32 32 SER SER A . n A 1 32 ALA 32 33 33 ALA ALA A . n A 1 33 GLY 33 34 34 GLY GLY A . n A 1 34 VAL 34 35 35 VAL VAL A . n A 1 35 VAL 35 36 36 VAL VAL A . n A 1 36 PHE 36 37 37 PHE PHE A . n A 1 37 PRO 37 38 38 PRO PRO A . n A 1 38 ALA 38 39 39 ALA ALA A . n A 1 39 ASP 39 40 40 ASP ASP A . n A 1 40 ASN 40 41 41 ASN ASN A . n A 1 41 LEU 41 42 42 LEU LEU A . n A 1 42 SER 42 43 43 SER SER A . n A 1 43 GLU 43 44 44 GLU GLU A . n A 1 44 ALA 44 45 45 ALA ALA A . n A 1 45 GLN 45 46 46 GLN GLN A . n A 1 46 MSE 46 47 47 MSE MSE A . n A 1 47 GLN 47 48 48 GLN GLN A . n A 1 48 LEU 48 49 49 LEU LEU A . n A 1 49 ILE 49 50 50 ILE ILE A . n A 1 50 ALA 50 51 51 ALA ALA A . n A 1 51 ARG 51 52 52 ARG ARG A . n A 1 52 GLU 52 53 53 GLU GLU A . n A 1 53 LEU 53 54 54 LEU LEU A . n A 1 54 GLY 54 55 55 GLY GLY A . n A 1 55 HIS 55 56 56 HIS HIS A . n A 1 56 SER 56 57 57 SER SER A . n A 1 57 GLU 57 58 58 GLU GLU A . n A 1 58 THR 58 59 59 THR THR A . n A 1 59 ALA 59 60 60 ALA ALA A . n A 1 60 PHE 60 61 61 PHE PHE A . n A 1 61 LEU 61 62 62 LEU LEU A . n A 1 62 LEU 62 63 63 LEU LEU A . n A 1 63 HIS 63 64 64 HIS HIS A . n A 1 64 SER 64 65 65 SER SER A . n A 1 65 ASP 65 66 66 ASP ASP A . n A 1 66 ASP 66 67 67 ASP ASP A . n A 1 67 SER 67 68 68 SER SER A . n A 1 68 ASP 68 69 69 ASP ASP A . n A 1 69 VAL 69 70 70 VAL VAL A . n A 1 70 ARG 70 71 71 ARG ARG A . n A 1 71 ILE 71 72 72 ILE ILE A . n A 1 72 ARG 72 73 73 ARG ARG A . n A 1 73 TYR 73 74 74 TYR TYR A . n A 1 74 PHE 74 75 75 PHE PHE A . n A 1 75 THR 75 76 76 THR THR A . n A 1 76 PRO 76 77 77 PRO PRO A . n A 1 77 THR 77 78 78 THR THR A . n A 1 78 VAL 78 79 79 VAL VAL A . n A 1 79 GLU 79 80 80 GLU GLU A . n A 1 80 VAL 80 81 81 VAL VAL A . n A 1 81 PRO 81 82 82 PRO PRO A . n A 1 82 ILE 82 83 83 ILE ILE A . n A 1 83 CYS 83 84 84 CYS CYS A . n A 1 84 GLY 84 85 85 GLY GLY A . n A 1 85 HIS 85 86 86 HIS HIS A . n A 1 86 ALA 86 87 87 ALA ALA A . n A 1 87 THR 87 88 88 THR THR A . n A 1 88 VAL 88 89 89 VAL VAL A . n A 1 89 ALA 89 90 90 ALA ALA A . n A 1 90 ALA 90 91 91 ALA ALA A . n A 1 91 HIS 91 92 92 HIS HIS A . n A 1 92 TYR 92 93 93 TYR TYR A . n A 1 93 VAL 93 94 94 VAL VAL A . n A 1 94 ARG 94 95 95 ARG ARG A . n A 1 95 ALA 95 96 96 ALA ALA A . n A 1 96 LYS 96 97 97 LYS LYS A . n A 1 97 VAL 97 98 98 VAL VAL A . n A 1 98 LEU 98 99 99 LEU LEU A . n A 1 99 GLY 99 100 100 GLY GLY A . n A 1 100 LEU 100 101 101 LEU LEU A . n A 1 101 GLY 101 102 102 GLY GLY A . n A 1 102 ASN 102 103 103 ASN ASN A . n A 1 103 CYS 103 104 104 CYS CYS A . n A 1 104 THR 104 105 105 THR THR A . n A 1 105 ILE 105 106 106 ILE ILE A . n A 1 106 TRP 106 107 107 TRP TRP A . n A 1 107 GLN 107 108 108 GLN GLN A . n A 1 108 THR 108 109 109 THR THR A . n A 1 109 SER 109 110 110 SER SER A . n A 1 110 LEU 110 111 111 LEU LEU A . n A 1 111 ALA 111 112 112 ALA ALA A . n A 1 112 GLY 112 113 113 GLY GLY A . n A 1 113 LYS 113 114 114 LYS LYS A . n A 1 114 HIS 114 115 115 HIS HIS A . n A 1 115 ARG 115 116 116 ARG ARG A . n A 1 116 VAL 116 117 117 VAL VAL A . n A 1 117 THR 117 118 118 THR THR A . n A 1 118 ILE 118 119 119 ILE ILE A . n A 1 119 GLU 119 120 120 GLU GLU A . n A 1 120 LYS 120 121 121 LYS LYS A . n A 1 121 HIS 121 122 122 HIS HIS A . n A 1 122 ASN 122 123 123 ASN ASN A . n A 1 123 ASP 123 124 124 ASP ASP A . n A 1 124 ASP 124 125 125 ASP ASP A . n A 1 125 TYR 125 126 126 TYR TYR A . n A 1 126 ARG 126 127 127 ARG ARG A . n A 1 127 ILE 127 128 128 ILE ILE A . n A 1 128 SER 128 129 129 SER SER A . n A 1 129 LEU 129 130 130 LEU LEU A . n A 1 130 GLU 130 131 131 GLU GLU A . n A 1 131 GLN 131 132 132 GLN GLN A . n A 1 132 GLY 132 133 133 GLY GLY A . n A 1 133 THR 133 134 134 THR THR A . n A 1 134 PRO 134 135 135 PRO PRO A . n A 1 135 GLY 135 136 136 GLY GLY A . n A 1 136 PHE 136 137 137 PHE PHE A . n A 1 137 GLU 137 138 138 GLU GLU A . n A 1 138 PRO 138 139 139 PRO PRO A . n A 1 139 PRO 139 140 140 PRO PRO A . n A 1 140 LEU 140 141 141 LEU LEU A . n A 1 141 GLU 141 142 142 GLU GLU A . n A 1 142 GLY 142 143 143 GLY GLY A . n A 1 143 GLU 143 144 144 GLU GLU A . n A 1 144 THR 144 145 145 THR THR A . n A 1 145 ARG 145 146 146 ARG ARG A . n A 1 146 ALA 146 147 147 ALA ALA A . n A 1 147 ALA 147 148 148 ALA ALA A . n A 1 148 ILE 148 149 149 ILE ILE A . n A 1 149 ILE 149 150 150 ILE ILE A . n A 1 150 ASN 150 151 151 ASN ASN A . n A 1 151 ALA 151 152 152 ALA ALA A . n A 1 152 LEU 152 153 153 LEU LEU A . n A 1 153 HIS 153 154 154 HIS HIS A . n A 1 154 LEU 154 155 155 LEU LEU A . n A 1 155 THR 155 156 156 THR THR A . n A 1 156 GLU 156 157 157 GLU GLU A . n A 1 157 ASP 157 158 158 ASP ASP A . n A 1 158 ASP 158 159 159 ASP ASP A . n A 1 159 ILE 159 160 160 ILE ILE A . n A 1 160 LEU 160 161 161 LEU LEU A . n A 1 161 PRO 161 162 162 PRO PRO A . n A 1 162 GLY 162 163 163 GLY GLY A . n A 1 163 LEU 163 164 164 LEU LEU A . n A 1 164 PRO 164 165 165 PRO PRO A . n A 1 165 ILE 165 166 166 ILE ILE A . n A 1 166 GLN 166 167 167 GLN GLN A . n A 1 167 VAL 167 168 168 VAL VAL A . n A 1 168 ALA 168 169 169 ALA ALA A . n A 1 169 THR 169 170 170 THR THR A . n A 1 170 THR 170 171 171 THR THR A . n A 1 171 GLY 171 172 172 GLY GLY A . n A 1 172 HIS 172 173 173 HIS HIS A . n A 1 173 SER 173 174 174 SER SER A . n A 1 174 LYS 174 175 175 LYS LYS A . n A 1 175 VAL 175 176 176 VAL VAL A . n A 1 176 MSE 176 177 177 MSE MSE A . n A 1 177 ILE 177 178 178 ILE ILE A . n A 1 178 PRO 178 179 179 PRO PRO A . n A 1 179 LEU 179 180 180 LEU LEU A . n A 1 180 LYS 180 181 181 LYS LYS A . n A 1 181 PRO 181 182 182 PRO PRO A . n A 1 182 GLU 182 183 183 GLU GLU A . n A 1 183 VAL 183 184 184 VAL VAL A . n A 1 184 ASP 184 185 185 ASP ASP A . n A 1 185 ILE 185 186 186 ILE ILE A . n A 1 186 ASP 186 187 187 ASP ASP A . n A 1 187 ALA 187 188 188 ALA ALA A . n A 1 188 LEU 188 189 189 LEU LEU A . n A 1 189 SER 189 190 190 SER SER A . n A 1 190 PRO 190 191 191 PRO PRO A . n A 1 191 ASP 191 192 192 ASP ASP A . n A 1 192 LEU 192 193 193 LEU LEU A . n A 1 193 ASN 193 194 194 ASN ASN A . n A 1 194 ALA 194 195 195 ALA ALA A . n A 1 195 LEU 195 196 196 LEU LEU A . n A 1 196 THR 196 197 197 THR THR A . n A 1 197 ALA 197 198 198 ALA ALA A . n A 1 198 ILE 198 199 199 ILE ILE A . n A 1 199 SER 199 200 200 SER SER A . n A 1 200 LYS 200 201 201 LYS LYS A . n A 1 201 LYS 201 202 202 LYS LYS A . n A 1 202 ILE 202 203 203 ILE ILE A . n A 1 203 GLY 203 204 204 GLY GLY A . n A 1 204 CYS 204 205 205 CYS CYS A . n A 1 205 ASN 205 206 206 ASN ASN A . n A 1 206 GLY 206 207 207 GLY GLY A . n A 1 207 PHE 207 208 208 PHE PHE A . n A 1 208 PHE 208 209 209 PHE PHE A . n A 1 209 PRO 209 210 210 PRO PRO A . n A 1 210 PHE 210 211 211 PHE PHE A . n A 1 211 GLN 211 212 212 GLN GLN A . n A 1 212 ILE 212 213 213 ILE ILE A . n A 1 213 ARG 213 214 214 ARG ARG A . n A 1 214 PRO 214 215 215 PRO PRO A . n A 1 215 GLY 215 216 216 GLY GLY A . n A 1 216 LYS 216 217 217 LYS LYS A . n A 1 217 ASN 217 218 218 ASN ASN A . n A 1 218 GLU 218 219 219 GLU GLU A . n A 1 219 THR 219 220 220 THR THR A . n A 1 220 ASP 220 221 221 ASP ASP A . n A 1 221 GLY 221 222 222 GLY GLY A . n A 1 222 ARG 222 223 223 ARG ARG A . n A 1 223 MSE 223 224 224 MSE MSE A . n A 1 224 PHE 224 225 225 PHE PHE A . n A 1 225 SER 225 226 226 SER SER A . n A 1 226 PRO 226 227 227 PRO PRO A . n A 1 227 ALA 227 228 228 ALA ALA A . n A 1 228 ILE 228 229 229 ILE ILE A . n A 1 229 GLY 229 230 230 GLY GLY A . n A 1 230 ILE 230 231 231 ILE ILE A . n A 1 231 VAL 231 232 232 VAL VAL A . n A 1 232 GLU 232 233 233 GLU GLU A . n A 1 233 ASP 233 234 234 ASP ASP A . n A 1 234 PRO 234 235 235 PRO PRO A . n A 1 235 VAL 235 236 236 VAL VAL A . n A 1 236 THR 236 237 237 THR THR A . n A 1 237 GLY 237 238 238 GLY GLY A . n A 1 238 ASN 238 239 239 ASN ASN A . n A 1 239 ALA 239 240 240 ALA ALA A . n A 1 240 ASN 240 241 241 ASN ASN A . n A 1 241 GLY 241 242 242 GLY GLY A . n A 1 242 PRO 242 243 243 PRO PRO A . n A 1 243 MSE 243 244 244 MSE MSE A . n A 1 244 GLY 244 245 245 GLY GLY A . n A 1 245 ALA 245 246 246 ALA ALA A . n A 1 246 TRP 246 247 247 TRP TRP A . n A 1 247 LEU 247 248 248 LEU LEU A . n A 1 248 VAL 248 249 249 VAL VAL A . n A 1 249 HIS 249 250 250 HIS HIS A . n A 1 250 HIS 250 251 251 HIS HIS A . n A 1 251 ASN 251 252 252 ASN ASN A . n A 1 252 VAL 252 253 253 VAL VAL A . n A 1 253 LEU 253 254 254 LEU LEU A . n A 1 254 PRO 254 255 255 PRO PRO A . n A 1 255 HIS 255 256 256 HIS HIS A . n A 1 256 ASP 256 257 257 ASP ASP A . n A 1 257 GLY 257 258 258 GLY GLY A . n A 1 258 ASN 258 259 259 ASN ASN A . n A 1 259 VAL 259 260 260 VAL VAL A . n A 1 260 LEU 260 261 261 LEU LEU A . n A 1 261 ARG 261 262 262 ARG ARG A . n A 1 262 VAL 262 263 263 VAL VAL A . n A 1 263 LYS 263 264 264 LYS LYS A . n A 1 264 GLY 264 265 265 GLY GLY A . n A 1 265 HIS 265 266 266 HIS HIS A . n A 1 266 GLN 266 267 267 GLN GLN A . n A 1 267 GLY 267 268 268 GLY GLY A . n A 1 268 ARG 268 269 269 ARG ARG A . n A 1 269 ALA 269 270 270 ALA ALA A . n A 1 270 LEU 270 271 271 LEU LEU A . n A 1 271 GLY 271 272 272 GLY GLY A . n A 1 272 ARG 272 273 273 ARG ARG A . n A 1 273 ASP 273 274 274 ASP ASP A . n A 1 274 GLY 274 275 275 GLY GLY A . n A 1 275 MSE 275 276 276 MSE MSE A . n A 1 276 ILE 276 277 277 ILE ILE A . n A 1 277 GLU 277 278 278 GLU GLU A . n A 1 278 VAL 278 279 279 VAL VAL A . n A 1 279 THR 279 280 280 THR THR A . n A 1 280 VAL 280 281 281 VAL VAL A . n A 1 281 THR 281 282 282 THR THR A . n A 1 282 ILE 282 283 283 ILE ILE A . n A 1 283 ARG 283 284 284 ARG ARG A . n A 1 284 ASP 284 285 285 ASP ASP A . n A 1 285 ASN 285 286 286 ASN ASN A . n A 1 286 GLN 286 287 287 GLN GLN A . n A 1 287 PRO 287 288 288 PRO PRO A . n A 1 288 GLU 288 289 289 GLU GLU A . n A 1 289 LYS 289 290 290 LYS LYS A . n A 1 290 VAL 290 291 291 VAL VAL A . n A 1 291 THR 291 292 292 THR THR A . n A 1 292 ILE 292 293 293 ILE ILE A . n A 1 293 SER 293 294 294 SER SER A . n A 1 294 GLY 294 295 295 GLY GLY A . n A 1 295 THR 295 296 296 THR THR A . n A 1 296 ALA 296 297 297 ALA ALA A . n A 1 297 VAL 297 298 298 VAL VAL A . n A 1 298 ILE 298 299 299 ILE ILE A . n A 1 299 LEU 299 300 300 LEU LEU A . n A 1 300 PHE 300 301 301 PHE PHE A . n A 1 301 HIS 301 302 302 HIS HIS A . n A 1 302 ALA 302 303 303 ALA ALA A . n A 1 303 GLU 303 304 304 GLU GLU A . n A 1 304 TRP 304 305 305 TRP TRP A . n A 1 305 ALA 305 306 306 ALA ALA A . n A 1 306 ILE 306 307 307 ILE ILE A . n A 1 307 GLU 307 308 308 GLU GLU A . n A 1 308 LEU 308 309 309 LEU LEU A . n A 1 309 GLY 309 310 310 GLY GLY A . n A 1 310 SER 310 311 311 SER SER A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 601 601 SO4 SO4 ? . C 2 SO4 1 602 602 SO4 SO4 ? . D 2 SO4 1 603 603 SO4 SO4 ? . E 2 SO4 1 604 604 SO4 SO4 ? . F 2 SO4 1 605 605 SO4 SO4 ? . G 3 HOH 1 401 401 HOH WAT ? . G 3 HOH 2 402 402 HOH WAT ? . G 3 HOH 3 403 403 HOH WAT ? . G 3 HOH 4 404 404 HOH WAT ? . G 3 HOH 5 405 405 HOH WAT ? . G 3 HOH 6 406 406 HOH WAT ? . G 3 HOH 7 407 407 HOH WAT ? . G 3 HOH 8 408 408 HOH WAT ? . G 3 HOH 9 409 409 HOH WAT ? . G 3 HOH 10 410 410 HOH WAT ? . G 3 HOH 11 411 411 HOH WAT ? . G 3 HOH 12 412 412 HOH WAT ? . G 3 HOH 13 413 413 HOH WAT ? . G 3 HOH 14 414 414 HOH WAT ? . G 3 HOH 15 415 415 HOH WAT ? . G 3 HOH 16 416 416 HOH WAT ? . G 3 HOH 17 417 417 HOH WAT ? . G 3 HOH 18 418 418 HOH WAT ? . G 3 HOH 19 419 419 HOH WAT ? . G 3 HOH 20 420 420 HOH WAT ? . G 3 HOH 21 421 421 HOH WAT ? . G 3 HOH 22 422 422 HOH WAT ? . G 3 HOH 23 423 423 HOH WAT ? . G 3 HOH 24 424 424 HOH WAT ? . G 3 HOH 25 425 425 HOH WAT ? . G 3 HOH 26 426 426 HOH WAT ? . G 3 HOH 27 427 427 HOH WAT ? . G 3 HOH 28 428 428 HOH WAT ? . G 3 HOH 29 429 429 HOH WAT ? . G 3 HOH 30 430 430 HOH WAT ? . G 3 HOH 31 431 431 HOH WAT ? . G 3 HOH 32 432 432 HOH WAT ? . G 3 HOH 33 433 433 HOH WAT ? . G 3 HOH 34 434 434 HOH WAT ? . G 3 HOH 35 435 435 HOH WAT ? . G 3 HOH 36 436 436 HOH WAT ? . G 3 HOH 37 437 437 HOH WAT ? . G 3 HOH 38 438 438 HOH WAT ? . G 3 HOH 39 439 439 HOH WAT ? . G 3 HOH 40 440 440 HOH WAT ? . G 3 HOH 41 441 441 HOH WAT ? . G 3 HOH 42 442 442 HOH WAT ? . G 3 HOH 43 443 443 HOH WAT ? . G 3 HOH 44 444 444 HOH WAT ? . G 3 HOH 45 445 445 HOH WAT ? . G 3 HOH 46 446 446 HOH WAT ? . G 3 HOH 47 447 447 HOH WAT ? . G 3 HOH 48 449 449 HOH WAT ? . G 3 HOH 49 450 450 HOH WAT ? . G 3 HOH 50 451 451 HOH WAT ? . G 3 HOH 51 452 452 HOH WAT ? . G 3 HOH 52 453 453 HOH WAT ? . G 3 HOH 53 454 454 HOH WAT ? . G 3 HOH 54 455 455 HOH WAT ? . G 3 HOH 55 456 456 HOH WAT ? . G 3 HOH 56 457 457 HOH WAT ? . G 3 HOH 57 458 458 HOH WAT ? . G 3 HOH 58 459 459 HOH WAT ? . G 3 HOH 59 460 460 HOH WAT ? . G 3 HOH 60 461 461 HOH WAT ? . G 3 HOH 61 462 462 HOH WAT ? . G 3 HOH 62 463 463 HOH WAT ? . G 3 HOH 63 464 464 HOH WAT ? . G 3 HOH 64 465 465 HOH WAT ? . G 3 HOH 65 466 466 HOH WAT ? . G 3 HOH 66 467 467 HOH WAT ? . G 3 HOH 67 468 468 HOH WAT ? . G 3 HOH 68 469 469 HOH WAT ? . G 3 HOH 69 470 470 HOH WAT ? . G 3 HOH 70 471 471 HOH WAT ? . G 3 HOH 71 472 472 HOH WAT ? . G 3 HOH 72 473 473 HOH WAT ? . G 3 HOH 73 474 474 HOH WAT ? . G 3 HOH 74 475 475 HOH WAT ? . G 3 HOH 75 476 476 HOH WAT ? . G 3 HOH 76 477 477 HOH WAT ? . G 3 HOH 77 478 478 HOH WAT ? . G 3 HOH 78 479 479 HOH WAT ? . G 3 HOH 79 480 480 HOH WAT ? . G 3 HOH 80 481 481 HOH WAT ? . G 3 HOH 81 482 482 HOH WAT ? . G 3 HOH 82 483 483 HOH WAT ? . G 3 HOH 83 484 484 HOH WAT ? . G 3 HOH 84 485 485 HOH WAT ? . G 3 HOH 85 486 486 HOH WAT ? . G 3 HOH 86 487 487 HOH WAT ? . G 3 HOH 87 488 488 HOH WAT ? . G 3 HOH 88 489 489 HOH WAT ? . G 3 HOH 89 490 490 HOH WAT ? . G 3 HOH 90 491 491 HOH WAT ? . G 3 HOH 91 492 492 HOH WAT ? . G 3 HOH 92 493 493 HOH WAT ? . G 3 HOH 93 494 494 HOH WAT ? . G 3 HOH 94 495 495 HOH WAT ? . G 3 HOH 95 496 496 HOH WAT ? . G 3 HOH 96 497 497 HOH WAT ? . G 3 HOH 97 498 498 HOH WAT ? . G 3 HOH 98 499 499 HOH WAT ? . G 3 HOH 99 500 500 HOH WAT ? . G 3 HOH 100 501 501 HOH WAT ? . G 3 HOH 101 502 502 HOH WAT ? . G 3 HOH 102 503 503 HOH WAT ? . G 3 HOH 103 504 504 HOH WAT ? . G 3 HOH 104 505 505 HOH WAT ? . G 3 HOH 105 506 506 HOH WAT ? . G 3 HOH 106 507 507 HOH WAT ? . G 3 HOH 107 508 508 HOH WAT ? . G 3 HOH 108 509 509 HOH WAT ? . G 3 HOH 109 510 510 HOH WAT ? . G 3 HOH 110 511 511 HOH WAT ? . G 3 HOH 111 512 512 HOH WAT ? . G 3 HOH 112 513 513 HOH WAT ? . G 3 HOH 113 514 514 HOH WAT ? . G 3 HOH 114 515 515 HOH WAT ? . G 3 HOH 115 516 516 HOH WAT ? . G 3 HOH 116 517 517 HOH WAT ? . G 3 HOH 117 518 518 HOH WAT ? . G 3 HOH 118 519 519 HOH WAT ? . G 3 HOH 119 520 520 HOH WAT ? . G 3 HOH 120 521 521 HOH WAT ? . G 3 HOH 121 522 522 HOH WAT ? . G 3 HOH 122 523 523 HOH WAT ? . G 3 HOH 123 525 525 HOH WAT ? . G 3 HOH 124 526 526 HOH WAT ? . G 3 HOH 125 527 527 HOH WAT ? . G 3 HOH 126 528 528 HOH WAT ? . G 3 HOH 127 529 529 HOH WAT ? . G 3 HOH 128 531 531 HOH WAT ? . G 3 HOH 129 532 532 HOH WAT ? . G 3 HOH 130 533 533 HOH WAT ? . G 3 HOH 131 534 534 HOH WAT ? . G 3 HOH 132 535 535 HOH WAT ? . G 3 HOH 133 536 536 HOH WAT ? . G 3 HOH 134 537 537 HOH WAT ? . G 3 HOH 135 538 538 HOH WAT ? . G 3 HOH 136 539 539 HOH WAT ? . G 3 HOH 137 542 542 HOH WAT ? . G 3 HOH 138 543 543 HOH WAT ? . G 3 HOH 139 545 545 HOH WAT ? . G 3 HOH 140 546 546 HOH WAT ? . G 3 HOH 141 547 547 HOH WAT ? . G 3 HOH 142 548 548 HOH WAT ? . G 3 HOH 143 549 549 HOH WAT ? . G 3 HOH 144 550 550 HOH WAT ? . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-05-20 2 'Structure model' 1 1 2004-02-24 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # _software.name CNS _software.classification refinement _software.version 1.1 _software.citation_id ? _software.pdbx_ordinal 1 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 OD1 A ASN 6 ? ? 1_555 OD1 A ASN 6 ? ? 3_557 1.82 2 1 OD2 A ASP 124 ? ? 1_555 OD2 A ASP 124 ? ? 3_556 2.08 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 10 ? ? -66.81 8.24 2 1 ARG A 29 ? ? -112.35 -165.64 3 1 ASN A 41 ? ? -95.39 34.27 4 1 HIS A 122 ? ? -172.55 121.23 5 1 ASN A 123 ? ? 39.65 69.01 6 1 ASP A 124 ? ? 63.31 -13.88 7 1 THR A 171 ? ? -143.50 11.15 8 1 SER A 174 ? ? -42.91 152.65 9 1 SER A 226 ? ? -141.74 56.12 10 1 ASP A 257 ? ? -103.28 -62.41 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 water HOH #