HEADER TRANSCRIPTION 14-MAY-03 1PB6 OBSLTE 16-JUN-10 1PB6 3LOC TITLE CRYSTAL STRUCTURE OF HYPOTHETICAL TRANSCRIPTIONAL REGULATOR YCDC COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL TRANSCRIPTIONAL REGULATOR YCDC; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: PUTATIVE TET OPERON REGULATOR; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: YCDC; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: T7 TOPO-CT KEYWDS HELIX-LOOP-HELIX, HYPOTHETICAL TRANSCRIPTIONAL REGULATOR, DIMER, KEYWDS 2 STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE INITIATIVE, NEW YORK SGX KEYWDS 3 RESEARCH CENTER FOR STRUCTURAL GENOMICS, NYSGXRC, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR Y.V.PATSKOVSKY,V.MENNELLA,S.C.ALMO,S.K.BURLEY,NEW YORK SGX RESEARCH AUTHOR 2 CENTER FOR STRUCTURAL GENOMICS (NYSGXRC) REVDAT 5 16-JUN-10 1PB6 1 OBSLTE REVDAT 4 24-FEB-09 1PB6 1 VERSN REVDAT 3 25-JAN-05 1PB6 1 AUTHOR KEYWDS REMARK REVDAT 2 30-SEP-03 1PB6 1 AUTHOR JRNL REMARK REVDAT 1 27-MAY-03 1PB6 0 JRNL AUTH Y.V.PATSKOVSKY,V.MENNELLA,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF HYPOTHETICAL TRANSCRIPTIONAL REGULATOR JRNL TITL 2 YCDC FROM ESCHERICHIA COLI JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 6.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 86.5 REMARK 3 NUMBER OF REFLECTIONS : 32117 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.238 REMARK 3 FREE R VALUE : 0.277 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1628 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.003 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.58 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 59.02 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2058 REMARK 3 BIN R VALUE (WORKING SET) : 0.3170 REMARK 3 BIN FREE R VALUE : 0.3280 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 109 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.002 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6268 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 160 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.96 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.51400 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : -0.06300 REMARK 3 B13 (A**2) : 0.12400 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.37 REMARK 3 ESD FROM SIGMAA (A) : 0.46 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.44 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.53 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.35 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 20.92 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.28 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.730 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.870 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.950 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 4.630 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX.PRO REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 MAD DATA WERE COLLECTED TO 2.8 A RESOLUTION AND USED TO BUILD A REMARK 3 MODEL WHICH REMARK 3 WAS FURTHER REFINED AGAINS A NATIVE DATA SET COLLECTED TO 2.5 A REMARK 3 RESOLUTION REMARK 4 REMARK 4 1PB6 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAY-03. REMARK 100 THE RCSB ID CODE IS RCSB019212. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-MAR-03; 13-MAR-03 REMARK 200 TEMPERATURE (KELVIN) : 200; 200 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : APS; NSLS REMARK 200 BEAMLINE : 19-BM; X9A REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.96367; 0.972, 0.9786, 0.9789 REMARK 200 MONOCHROMATOR : MIRRORS; MIRRORS REMARK 200 OPTICS : MIRRORS; MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD; IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : NULL; MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40218 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.480 REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : 0.09300 REMARK 200 FOR THE DATA SET : 8.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : 0.44000 REMARK 200 R SYM FOR SHELL (I) : 0.43000 REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE/RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM CHLORIDE, SODIUM FORMATE, REMARK 280 GLYCEROL, PH 7, VAPOR DIFFUSION, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.01000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 78.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 69.80500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 78.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.01000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 69.80500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A HOMODIMER. EACH ASYMMETRIC REMARK 300 UNIT CONTAINS TWO DIMERS REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16570 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4600 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16610 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 THR A 1 REMARK 465 GLN A 2 REMARK 465 GLY A 3 REMARK 465 ALA A 4 REMARK 465 VAL A 5 REMARK 465 LYS A 6 REMARK 465 THR A 7 REMARK 465 THR A 8 REMARK 465 GLY A 9 REMARK 465 LYS A 10 REMARK 465 ARG A 11 REMARK 465 SER A 12 REMARK 465 ARG A 13 REMARK 465 MET B 0 REMARK 465 THR B 1 REMARK 465 GLN B 2 REMARK 465 GLY B 3 REMARK 465 ALA B 4 REMARK 465 VAL B 5 REMARK 465 LYS B 6 REMARK 465 THR B 7 REMARK 465 THR B 8 REMARK 465 GLY B 9 REMARK 465 LYS B 10 REMARK 465 ARG B 11 REMARK 465 SER B 12 REMARK 465 ARG B 13 REMARK 465 MET C 0 REMARK 465 THR C 1 REMARK 465 GLN C 2 REMARK 465 GLY C 3 REMARK 465 ALA C 4 REMARK 465 VAL C 5 REMARK 465 LYS C 6 REMARK 465 THR C 7 REMARK 465 THR C 8 REMARK 465 GLY C 9 REMARK 465 LYS C 10 REMARK 465 ARG C 11 REMARK 465 SER C 12 REMARK 465 ARG C 13 REMARK 465 MET D 0 REMARK 465 THR D 1 REMARK 465 GLN D 2 REMARK 465 GLY D 3 REMARK 465 ALA D 4 REMARK 465 VAL D 5 REMARK 465 LYS D 6 REMARK 465 THR D 7 REMARK 465 THR D 8 REMARK 465 GLY D 9 REMARK 465 LYS D 10 REMARK 465 ARG D 11 REMARK 465 SER D 12 REMARK 465 ARG D 13 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 59 C - N - CA ANGL. DEV. = 10.5 DEGREES REMARK 500 PRO B 59 C - N - CA ANGL. DEV. = 9.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 83 119.68 -34.31 REMARK 500 PRO A 155 67.36 -67.94 REMARK 500 GLU A 190 -36.33 -35.96 REMARK 500 PRO C 89 -74.12 -30.65 REMARK 500 MET C 126 -39.03 -39.92 REMARK 500 PRO C 155 79.51 -69.44 REMARK 500 PRO D 59 -6.81 -56.10 REMARK 500 TYR D 107 64.80 -116.89 REMARK 500 PRO D 155 87.96 -69.41 REMARK 500 PRO D 210 98.91 -62.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 107 0.07 SIDE CHAIN REMARK 500 ARG D 70 0.15 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-T803 RELATED DB: TARGETDB DBREF 1PB6 A 0 211 UNP P0ACU2 YCDC_ECOLI 1 212 DBREF 1PB6 B 0 211 UNP P0ACU2 YCDC_ECOLI 1 212 DBREF 1PB6 C 0 211 UNP P0ACU2 YCDC_ECOLI 1 212 DBREF 1PB6 D 0 211 UNP P0ACU2 YCDC_ECOLI 1 212 SEQRES 1 A 212 MET THR GLN GLY ALA VAL LYS THR THR GLY LYS ARG SER SEQRES 2 A 212 ARG ALA VAL SER ALA LYS LYS LYS ALA ILE LEU SER ALA SEQRES 3 A 212 ALA LEU ASP THR PHE SER GLN PHE GLY PHE HIS GLY THR SEQRES 4 A 212 ARG LEU GLU GLN ILE ALA GLU LEU ALA GLY VAL SER LYS SEQRES 5 A 212 THR ASN LEU LEU TYR TYR PHE PRO SER LYS GLU ALA LEU SEQRES 6 A 212 TYR ILE ALA VAL LEU ARG GLN ILE LEU ASP ILE TRP LEU SEQRES 7 A 212 ALA PRO LEU LYS ALA PHE ARG GLU ASP PHE ALA PRO LEU SEQRES 8 A 212 ALA ALA ILE LYS GLU TYR ILE ARG LEU LYS LEU GLU VAL SEQRES 9 A 212 SER ARG ASP TYR PRO GLN ALA SER ARG LEU PHE CYS MET SEQRES 10 A 212 GLU MET LEU ALA GLY ALA PRO LEU LEU MET ASP GLU LEU SEQRES 11 A 212 THR GLY ASP LEU LYS ALA LEU ILE ASP GLU LYS SER ALA SEQRES 12 A 212 LEU ILE ALA GLY TRP VAL LYS SER GLY LYS LEU ALA PRO SEQRES 13 A 212 ILE ASP PRO GLN HIS LEU ILE PHE MET ILE TRP ALA SER SEQRES 14 A 212 THR GLN HIS TYR ALA ASP PHE ALA PRO GLN VAL GLU ALA SEQRES 15 A 212 VAL THR GLY ALA THR LEU ARG ASP GLU VAL PHE PHE ASN SEQRES 16 A 212 GLN THR VAL GLU ASN VAL GLN ARG ILE ILE ILE GLU GLY SEQRES 17 A 212 ILE ARG PRO ARG SEQRES 1 B 212 MET THR GLN GLY ALA VAL LYS THR THR GLY LYS ARG SER SEQRES 2 B 212 ARG ALA VAL SER ALA LYS LYS LYS ALA ILE LEU SER ALA SEQRES 3 B 212 ALA LEU ASP THR PHE SER GLN PHE GLY PHE HIS GLY THR SEQRES 4 B 212 ARG LEU GLU GLN ILE ALA GLU LEU ALA GLY VAL SER LYS SEQRES 5 B 212 THR ASN LEU LEU TYR TYR PHE PRO SER LYS GLU ALA LEU SEQRES 6 B 212 TYR ILE ALA VAL LEU ARG GLN ILE LEU ASP ILE TRP LEU SEQRES 7 B 212 ALA PRO LEU LYS ALA PHE ARG GLU ASP PHE ALA PRO LEU SEQRES 8 B 212 ALA ALA ILE LYS GLU TYR ILE ARG LEU LYS LEU GLU VAL SEQRES 9 B 212 SER ARG ASP TYR PRO GLN ALA SER ARG LEU PHE CYS MET SEQRES 10 B 212 GLU MET LEU ALA GLY ALA PRO LEU LEU MET ASP GLU LEU SEQRES 11 B 212 THR GLY ASP LEU LYS ALA LEU ILE ASP GLU LYS SER ALA SEQRES 12 B 212 LEU ILE ALA GLY TRP VAL LYS SER GLY LYS LEU ALA PRO SEQRES 13 B 212 ILE ASP PRO GLN HIS LEU ILE PHE MET ILE TRP ALA SER SEQRES 14 B 212 THR GLN HIS TYR ALA ASP PHE ALA PRO GLN VAL GLU ALA SEQRES 15 B 212 VAL THR GLY ALA THR LEU ARG ASP GLU VAL PHE PHE ASN SEQRES 16 B 212 GLN THR VAL GLU ASN VAL GLN ARG ILE ILE ILE GLU GLY SEQRES 17 B 212 ILE ARG PRO ARG SEQRES 1 C 212 MET THR GLN GLY ALA VAL LYS THR THR GLY LYS ARG SER SEQRES 2 C 212 ARG ALA VAL SER ALA LYS LYS LYS ALA ILE LEU SER ALA SEQRES 3 C 212 ALA LEU ASP THR PHE SER GLN PHE GLY PHE HIS GLY THR SEQRES 4 C 212 ARG LEU GLU GLN ILE ALA GLU LEU ALA GLY VAL SER LYS SEQRES 5 C 212 THR ASN LEU LEU TYR TYR PHE PRO SER LYS GLU ALA LEU SEQRES 6 C 212 TYR ILE ALA VAL LEU ARG GLN ILE LEU ASP ILE TRP LEU SEQRES 7 C 212 ALA PRO LEU LYS ALA PHE ARG GLU ASP PHE ALA PRO LEU SEQRES 8 C 212 ALA ALA ILE LYS GLU TYR ILE ARG LEU LYS LEU GLU VAL SEQRES 9 C 212 SER ARG ASP TYR PRO GLN ALA SER ARG LEU PHE CYS MET SEQRES 10 C 212 GLU MET LEU ALA GLY ALA PRO LEU LEU MET ASP GLU LEU SEQRES 11 C 212 THR GLY ASP LEU LYS ALA LEU ILE ASP GLU LYS SER ALA SEQRES 12 C 212 LEU ILE ALA GLY TRP VAL LYS SER GLY LYS LEU ALA PRO SEQRES 13 C 212 ILE ASP PRO GLN HIS LEU ILE PHE MET ILE TRP ALA SER SEQRES 14 C 212 THR GLN HIS TYR ALA ASP PHE ALA PRO GLN VAL GLU ALA SEQRES 15 C 212 VAL THR GLY ALA THR LEU ARG ASP GLU VAL PHE PHE ASN SEQRES 16 C 212 GLN THR VAL GLU ASN VAL GLN ARG ILE ILE ILE GLU GLY SEQRES 17 C 212 ILE ARG PRO ARG SEQRES 1 D 212 MET THR GLN GLY ALA VAL LYS THR THR GLY LYS ARG SER SEQRES 2 D 212 ARG ALA VAL SER ALA LYS LYS LYS ALA ILE LEU SER ALA SEQRES 3 D 212 ALA LEU ASP THR PHE SER GLN PHE GLY PHE HIS GLY THR SEQRES 4 D 212 ARG LEU GLU GLN ILE ALA GLU LEU ALA GLY VAL SER LYS SEQRES 5 D 212 THR ASN LEU LEU TYR TYR PHE PRO SER LYS GLU ALA LEU SEQRES 6 D 212 TYR ILE ALA VAL LEU ARG GLN ILE LEU ASP ILE TRP LEU SEQRES 7 D 212 ALA PRO LEU LYS ALA PHE ARG GLU ASP PHE ALA PRO LEU SEQRES 8 D 212 ALA ALA ILE LYS GLU TYR ILE ARG LEU LYS LEU GLU VAL SEQRES 9 D 212 SER ARG ASP TYR PRO GLN ALA SER ARG LEU PHE CYS MET SEQRES 10 D 212 GLU MET LEU ALA GLY ALA PRO LEU LEU MET ASP GLU LEU SEQRES 11 D 212 THR GLY ASP LEU LYS ALA LEU ILE ASP GLU LYS SER ALA SEQRES 12 D 212 LEU ILE ALA GLY TRP VAL LYS SER GLY LYS LEU ALA PRO SEQRES 13 D 212 ILE ASP PRO GLN HIS LEU ILE PHE MET ILE TRP ALA SER SEQRES 14 D 212 THR GLN HIS TYR ALA ASP PHE ALA PRO GLN VAL GLU ALA SEQRES 15 D 212 VAL THR GLY ALA THR LEU ARG ASP GLU VAL PHE PHE ASN SEQRES 16 D 212 GLN THR VAL GLU ASN VAL GLN ARG ILE ILE ILE GLU GLY SEQRES 17 D 212 ILE ARG PRO ARG FORMUL 5 HOH *160(H2 O) HELIX 1 1 ALA A 14 GLY A 34 1 21 HELIX 2 2 ARG A 39 ALA A 47 1 9 HELIX 3 3 SER A 50 PHE A 58 1 9 HELIX 4 4 SER A 60 LEU A 77 1 18 HELIX 5 5 LEU A 77 PHE A 83 1 7 HELIX 6 6 ALA A 88 TYR A 107 1 20 HELIX 7 7 TYR A 107 ALA A 120 1 14 HELIX 8 8 LEU A 125 GLY A 131 1 7 HELIX 9 9 GLY A 131 SER A 150 1 20 HELIX 10 10 ASP A 157 PHE A 175 1 19 HELIX 11 11 PHE A 175 GLY A 184 1 10 HELIX 12 12 ASP A 189 GLU A 206 1 18 HELIX 13 13 ALA B 14 THR B 38 1 25 HELIX 14 14 ARG B 39 GLY B 48 1 10 HELIX 15 15 SER B 50 PHE B 58 1 9 HELIX 16 16 SER B 60 LEU B 77 1 18 HELIX 17 17 LEU B 77 ALA B 82 1 6 HELIX 18 18 ALA B 88 TYR B 107 1 20 HELIX 19 19 TYR B 107 ALA B 120 1 14 HELIX 20 20 LEU B 125 GLY B 131 1 7 HELIX 21 21 GLY B 131 SER B 150 1 20 HELIX 22 22 ASP B 157 PHE B 175 1 19 HELIX 23 23 PHE B 175 GLY B 184 1 10 HELIX 24 24 ASP B 189 ARG B 209 1 21 HELIX 25 25 ALA C 14 GLY C 34 1 21 HELIX 26 26 ARG C 39 ALA C 47 1 9 HELIX 27 27 SER C 50 LEU C 55 1 6 HELIX 28 28 SER C 60 ALA C 82 1 23 HELIX 29 29 ALA C 88 TYR C 107 1 20 HELIX 30 30 TYR C 107 ALA C 120 1 14 HELIX 31 31 LEU C 125 GLY C 131 1 7 HELIX 32 32 GLY C 131 SER C 150 1 20 HELIX 33 33 ASP C 157 PHE C 175 1 19 HELIX 34 34 PHE C 175 GLY C 184 1 10 HELIX 35 35 ASP C 189 ARG C 209 1 21 HELIX 36 36 ALA D 14 THR D 38 1 25 HELIX 37 37 ARG D 39 GLY D 48 1 10 HELIX 38 38 SER D 50 PHE D 58 1 9 HELIX 39 39 SER D 60 LEU D 77 1 18 HELIX 40 40 LEU D 77 ALA D 82 1 6 HELIX 41 41 ALA D 88 TYR D 107 1 20 HELIX 42 42 TYR D 107 ALA D 120 1 14 HELIX 43 43 LEU D 125 GLY D 131 1 7 HELIX 44 44 GLY D 131 SER D 150 1 20 HELIX 45 45 ASP D 157 PHE D 175 1 19 HELIX 46 46 PHE D 175 GLY D 184 1 10 HELIX 47 47 ASP D 189 ARG D 209 1 21 CRYST1 52.020 139.610 156.000 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019223 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007163 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006410 0.00000