HEADER LIPASE PROTEIN COFACTOR 08-JUN-94 1PCN TITLE SOLUTION STRUCTURE OF PORCINE PANCREATIC PROCOLIPASE AS DETERMINED TITLE 2 FROM 1H HOMONUCLEAR TWO-AND THREE-DIMENSIONAL NMR CAVEAT 1PCN VAL A 1 HAS WRONG CHIRALITY AT ATOM CA PRO A 2 HAS WRONG CAVEAT 2 1PCN CHIRALITY AT ATOM CA SER A 78 HAS WRONG CHIRALITY AT ATOM CAVEAT 3 1PCN CA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PORCINE PANCREATIC PROCOLIPASE B; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SUS SCROFA; SOURCE 3 ORGANISM_COMMON: PIG; SOURCE 4 ORGANISM_TAXID: 9823; SOURCE 5 ORGAN: PANCREAS KEYWDS LIPASE PROTEIN COFACTOR EXPDTA SOLUTION NMR AUTHOR J.N.BREG,L.SARDA,P.J.COZZONE,N.RUGANI,R.BOELENS,R.KAPTEIN REVDAT 5 06-NOV-24 1PCN 1 REMARK REVDAT 4 25-SEP-24 1PCN 1 CAVEAT COMPND REMARK HET REVDAT 4 2 1 HETNAM FORMUL LINK SITE REVDAT 4 3 1 ATOM REVDAT 3 29-NOV-17 1PCN 1 REMARK HELIX REVDAT 2 24-FEB-09 1PCN 1 VERSN REVDAT 1 20-DEC-94 1PCN 0 JRNL AUTH J.N.BREG,L.SARDA,P.J.COZZONE,N.RUGANI,R.BOELENS,R.KAPTEIN JRNL TITL SOLUTION STRUCTURE OF PORCINE PANCREATIC PROCOLIPASE AS JRNL TITL 2 DETERMINED FROM 1H HOMONUCLEAR TWO-DIMENSIONAL AND JRNL TITL 3 THREE-DIMENSIONAL NMR. JRNL REF EUR.J.BIOCHEM. V. 227 663 1995 JRNL REFN ISSN 0014-2956 JRNL PMID 7867624 JRNL DOI 10.1111/J.1432-1033.1995.TB20186.X REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.N.BREG,E.C.UJAH,L.SARDA,P.J.COZZONE,R.KAPTEIN REMARK 1 TITL A PROTEIN FOLD ELEMENT COMPRISING A TRIPLE-STRAND B-SHEET REMARK 1 TITL 2 AND TWO DISULPHIDE BRIDGES RECOGNIZED IN PROCOLIPASE AND REMARK 1 TITL 3 OTHER UNRELATED PROTEINS REMARK 1 REF TO BE PUBLISHED REMARK 1 REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1PCN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000175604. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 13 CD GLU A 13 OE2 0.106 REMARK 500 GLU A 15 CD GLU A 15 OE2 0.107 REMARK 500 GLU A 45 CD GLU A 45 OE1 0.108 REMARK 500 GLU A 48 CD GLU A 48 OE1 0.107 REMARK 500 GLU A 64 CD GLU A 64 OE1 0.109 REMARK 500 GLU A 70 CD GLU A 70 OE2 0.112 REMARK 500 SER A 93 C SER A 93 OXT 0.139 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 2 N - CA - C ANGL. DEV. = 25.3 DEGREES REMARK 500 ASP A 3 CB - CG - OD1 ANGL. DEV. = -6.6 DEGREES REMARK 500 ARG A 5 N - CA - CB ANGL. DEV. = 14.8 DEGREES REMARK 500 ARG A 5 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ASP A 12 CB - CG - OD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 HIS A 30 ND1 - CE1 - NE2 ANGL. DEV. = 8.9 DEGREES REMARK 500 ASP A 31 CB - CG - OD1 ANGL. DEV. = 6.1 DEGREES REMARK 500 ASP A 31 CB - CG - OD2 ANGL. DEV. = -6.7 DEGREES REMARK 500 ARG A 38 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ALA A 40 N - CA - CB ANGL. DEV. = -8.5 DEGREES REMARK 500 ARG A 44 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 TYR A 58 CB - CG - CD2 ANGL. DEV. = -4.0 DEGREES REMARK 500 LYS A 60 CD - CE - NZ ANGL. DEV. = 20.3 DEGREES REMARK 500 ARG A 65 NE - CZ - NH1 ANGL. DEV. = 4.1 DEGREES REMARK 500 ASP A 72 CB - CG - OD1 ANGL. DEV. = -5.8 DEGREES REMARK 500 HIS A 88 ND1 - CE1 - NE2 ANGL. DEV. = 8.5 DEGREES REMARK 500 ARG A 92 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 SER A 93 N - CA - CB ANGL. DEV. = 18.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 2 52.47 -26.78 REMARK 500 ASP A 3 154.46 76.98 REMARK 500 ILE A 9 -163.42 -122.39 REMARK 500 ASN A 10 79.58 86.91 REMARK 500 LEU A 18 -74.11 -88.96 REMARK 500 ASN A 26 84.08 -69.88 REMARK 500 CYS A 27 77.29 -161.34 REMARK 500 ASP A 31 38.07 -73.09 REMARK 500 THR A 32 85.13 68.36 REMARK 500 ILE A 33 -29.75 61.34 REMARK 500 SER A 35 0.24 84.90 REMARK 500 LYS A 73 -81.37 -156.80 REMARK 500 ARG A 92 -61.06 -129.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 55 0.13 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1PCO RELATED DB: PDB DBREF 1PCN A 1 93 UNP P02703 COL_PIG 1 93 SEQRES 1 A 93 VAL PRO ASP PRO ARG GLY ILE ILE ILE ASN LEU ASP GLU SEQRES 2 A 93 GLY GLU LEU CYS LEU ASN SER ALA GLN CYS LYS SER ASN SEQRES 3 A 93 CYS CYS GLN HIS ASP THR ILE LEU SER LEU SER ARG CYS SEQRES 4 A 93 ALA LEU LYS ALA ARG GLU ASN SER GLU CYS SER ALA PHE SEQRES 5 A 93 THR LEU TYR GLY VAL TYR TYR LYS CYS PRO CYS GLU ARG SEQRES 6 A 93 GLY LEU THR CYS GLU GLY ASP LYS SER LEU VAL GLY SER SEQRES 7 A 93 ILE THR ASN THR ASN PHE GLY ILE CYS HIS ASN VAL GLY SEQRES 8 A 93 ARG SER HELIX 1 1 ASN A 19 GLN A 22 5 4 SHEET 1 S1 3 GLU A 15 CYS A 17 0 SHEET 2 S1 3 SER A 37 ALA A 40 -1 O CYS A 39 N GLU A 15 SHEET 3 S1 3 CYS A 27 HIS A 30 -1 N GLN A 29 O ARG A 38 SHEET 1 S2 3 SER A 47 ALA A 51 0 SHEET 2 S2 3 ASN A 83 HIS A 88 -1 O GLY A 85 N CYS A 49 SHEET 3 S2 3 THR A 68 GLU A 70 -1 N GLU A 70 O ILE A 86 SSBOND 1 CYS A 17 CYS A 28 1555 1555 2.01 SSBOND 2 CYS A 23 CYS A 39 1555 1555 2.00 SSBOND 3 CYS A 27 CYS A 61 1555 1555 1.99 SSBOND 4 CYS A 49 CYS A 69 1555 1555 2.01 SSBOND 5 CYS A 63 CYS A 87 1555 1555 2.01 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000