HEADER TRANSFERASE(PHOSPHOTRANSFERASE) 25-JAN-88 1PFK TITLE CRYSTAL STRUCTURE OF THE COMPLEX OF PHOSPHOFRUCTOKINASE FROM TITLE 2 ESCHERICHIA COLI WITH ITS REACTION PRODUCTS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOFRUCTOKINASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.7.1.11; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 CELL_LINE: 293; SOURCE 5 EXPRESSION_SYSTEM_STRAIN: 293 KEYWDS TRANSFERASE(PHOSPHOTRANSFERASE) EXPDTA X-RAY DIFFRACTION AUTHOR Y.SHIRAKIHARA,P.R.EVANS REVDAT 8 14-FEB-24 1PFK 1 HETSYN REVDAT 7 29-JUL-20 1PFK 1 COMPND REMARK HETNAM LINK REVDAT 7 2 1 SITE REVDAT 6 13-JUL-11 1PFK 1 VERSN REVDAT 5 24-FEB-09 1PFK 1 VERSN REVDAT 4 15-OCT-92 1PFK 1 SEQRES REVDAT 3 15-JUL-90 1PFK 1 REMARK REVDAT 2 19-APR-89 1PFK 1 JRNL REVDAT 1 09-JAN-89 1PFK 0 JRNL AUTH Y.SHIRAKIHARA,P.R.EVANS JRNL TITL CRYSTAL STRUCTURE OF THE COMPLEX OF PHOSPHOFRUCTOKINASE FROM JRNL TITL 2 ESCHERICHIA COLI WITH ITS REACTION PRODUCTS. JRNL REF J.MOL.BIOL. V. 204 973 1988 JRNL REFN ISSN 0022-2836 JRNL PMID 2975709 JRNL DOI 10.1016/0022-2836(88)90056-3 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH W.R.RYPNIEWSKI,P.R.EVANS REMARK 1 TITL CRYSTAL STRUCTURE OF UNLIGANDED PHOSPHOFRUCTOKINASE FROM REMARK 1 TITL 2 ESCHERICHIA COLI REMARK 1 REF J.MOL.BIOL. V. 207 805 1989 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 2 REMARK 1 AUTH P.R.EVANS,G.W.FARRANTS,M.C.LAWRENCE REMARK 1 TITL CRYSTALLOGRAPHIC STRUCTURE OF ALLOSTERICALLY INHIBITED REMARK 1 TITL 2 PHOSPHOFRUCTOKINASE AT 7 ANGSTROMS RESOLUTION REMARK 1 REF J.MOL.BIOL. V. 191 713 1986 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 3 REMARK 1 AUTH H.W.HELLINGA,P.R.EVANS REMARK 1 TITL NUCLEOTIDE SEQUENCE AND HIGH-LEVEL EXPRESSION OF THE MAJOR REMARK 1 TITL 2 ESCHERICHIA COLI PHOSPHOFRUCTOKINASE REMARK 1 REF EUR.J.BIOCHEM. V. 149 363 1985 REMARK 1 REFN ISSN 0014-2956 REMARK 1 REFERENCE 4 REMARK 1 AUTH P.R.EVANS,G.W.FARRANTS,P.J.HUDSON REMARK 1 TITL PHOSPHOFRUCTOKINASE. STRUCTURE AND CONTROL REMARK 1 REF PHILOS.TRANS.R.SOC.LONDON, V. 293 53 1981 REMARK 1 REF 2 SER.B REMARK 1 REFN ISSN 0080-4622 REMARK 1 REFERENCE 5 REMARK 1 AUTH P.R.EVANS,P.J.HUDSON REMARK 1 TITL STRUCTURE AND CONTROL OF PHOSPHOFRUCTOKINASE FROM BACILLUS REMARK 1 TITL 2 STEAROTHERMOPHILUS REMARK 1 REF NATURE V. 279 500 1979 REMARK 1 REFN ISSN 0028-0836 REMARK 1 REFERENCE 6 REMARK 1 AUTH P.R.EVANS,P.J.HUDSON REMARK 1 TITL THE THREE-DIMENSIONAL STRUCTURE OF PHOSPHOFRUCTOKINASE FROM REMARK 1 TITL 2 BACILLUS STEAROTHERMOPHILUS REMARK 1 REF PROC.FEBS MEET. V. 52 349 1978 REMARK 1 REFN ISSN 0071-4402 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PROLSQ REMARK 3 AUTHORS : KONNERT,HENDRICKSON REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 100.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4866 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 152 REMARK 3 SOLVENT ATOMS : 277 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.008 ; NULL REMARK 3 ANGLE DISTANCE (A) : 0.030 ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1PFK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000175642. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 56.15000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.70000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 56.15000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.70000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT CONTAINS TWO SUBUNITS REMARK 300 OF THE TETRAMER. THESE SUBUNITS HAVE BEEN ASSIGNED CHAIN REMARK 300 IDENTIFIERS *A* AND *B* AND HAVE DIFFERENT CONFORMATIONS. REMARK 300 CHAIN A IS A *CLOSED* SUBUNIT WITH THE MG++ ION BRIDGING REMARK 300 THE TWO PRODUCTS. CHAIN B IS AN *OPEN* SUBUNIT WITH THE REMARK 300 MG++ BOUND TO ADP ONLY. THERE ARE TWO WATER CHAINS, ONE REMARK 300 CORRESPONDING TO EACH SUBUNIT, AND EQUIVALENT WATER REMARK 300 MOLECULES IN EACH CHAIN HAVE BEEN ASSIGNED THE SAME RESIDUE REMARK 300 NUMBER. THE TETRAMER CAN BE COMPLETED FROM THE DIMER IN REMARK 300 THIS ENTRY BY ROTATING 180 DEGREES ABOUT Z REMARK 300 (I.E. -X, -Y, Z). THE STORED ORTHOGONAL CRYSTALLOGRAPHIC REMARK 300 COORDINATES IN THIS ENTRY MAY BE CONVERTED TO THE MOLECULAR REMARK 300 PQR FRAME (WITH THE MOLECULAR DIADS ALONG P,Q,R) BY THE REMARK 300 TRANSFORMATION REMARK 300 0.87831 0.47808 0.00000 0.00000 REMARK 300 0.00000 0.00000 -1.00000 -2.71300 REMARK 300 -0.47808 0.87831 0.00000 0.00000 REMARK 300 REMARK 300 THE TRANSFORMATION SPECIFIED ON THE *MTRIX* RECORDS BELOW REMARK 300 WILL YIELD APPROXIMATE COORDINATES FOR THE B CHAIN WHEN REMARK 300 APPLIED TO THE A CHAIN. IT WILL ALSO YIELD APPROXIMATE REMARK 300 COORDINATES FOR THE A CHAIN WHEN APPLIED TO THE B CHAIN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 23490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 41100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -194.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 214 CD CE NZ REMARK 470 LYS A 236 CG CD CE NZ REMARK 470 LYS B 236 CD CE NZ REMARK 470 LYS B 304 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 316 O HOH A 427 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 48 NE - CZ - NH2 ANGL. DEV. = -4.3 DEGREES REMARK 500 ASP A 59 CB - CG - OD1 ANGL. DEV. = 10.5 DEGREES REMARK 500 ASP A 59 CB - CG - OD2 ANGL. DEV. = -7.2 DEGREES REMARK 500 ARG A 63 CD - NE - CZ ANGL. DEV. = 12.3 DEGREES REMARK 500 ARG A 63 NE - CZ - NH1 ANGL. DEV. = 6.5 DEGREES REMARK 500 ARG A 63 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG A 72 CD - NE - CZ ANGL. DEV. = 12.2 DEGREES REMARK 500 ARG A 72 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 77 NE - CZ - NH1 ANGL. DEV. = 4.4 DEGREES REMARK 500 ARG A 77 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ASP A 78 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ARG A 82 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG A 82 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG A 92 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 ASP A 127 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ARG A 152 NE - CZ - NH1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ARG A 154 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG A 198 NE - CZ - NH1 ANGL. DEV. = 5.0 DEGREES REMARK 500 ARG A 198 NE - CZ - NH2 ANGL. DEV. = -5.8 DEGREES REMARK 500 GLU A 241 CA - CB - CG ANGL. DEV. = 13.4 DEGREES REMARK 500 ARG A 243 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG A 243 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG A 252 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A 261 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 282 NE - CZ - NH1 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP B 12 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP B 53 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG B 54 NE - CZ - NH1 ANGL. DEV. = 4.7 DEGREES REMARK 500 ARG B 54 NE - CZ - NH2 ANGL. DEV. = -5.0 DEGREES REMARK 500 ARG B 63 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ARG B 72 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG B 77 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ARG B 162 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG B 162 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG B 171 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG B 243 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 ASP B 260 CB - CG - OD2 ANGL. DEV. = -5.6 DEGREES REMARK 500 TRP B 311 CA - CB - CG ANGL. DEV. = 12.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 1 98.33 74.16 REMARK 500 THR A 125 140.42 -170.08 REMARK 500 ARG A 171 -95.60 75.73 REMARK 500 CYS A 225 -172.30 -176.98 REMARK 500 LYS A 308 47.61 -92.64 REMARK 500 ILE B 1 108.89 77.75 REMARK 500 PHE B 76 -19.96 -46.97 REMARK 500 THR B 125 138.20 175.14 REMARK 500 ARG B 171 -92.84 59.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 ADP A 324 AND ADP B 324 ARE THE PRODUCTS OF THE CATALYTIC REMARK 600 REACTION ATP + F6P --> ADP + F-1,6-DP. ADP A 326 AND REMARK 600 ADP B 326 ARE THE ALLOSTERIC ACTIVATORS. REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 325 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 103 OD2 REMARK 620 2 FBP A 323 O2P 146.2 REMARK 620 3 ADP A 324 O2B 84.8 91.3 REMARK 620 4 HOH A 386 O 102.6 111.0 101.5 REMARK 620 5 HOH A 402 O 72.8 73.5 85.4 171.4 REMARK 620 6 HOH A 417 O 102.4 72.3 159.9 95.3 78.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 327 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 185 O REMARK 620 2 GLU A 187 OE1 103.4 REMARK 620 3 ADP A 326 O2B 90.6 159.7 REMARK 620 4 ADP A 326 O1A 173.5 81.0 86.5 REMARK 620 5 HOH A 368 O 86.9 84.4 81.7 98.4 REMARK 620 6 HOH A 369 O 80.7 99.8 97.0 94.0 167.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 327 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY B 185 O REMARK 620 2 GLU B 187 OE1 88.9 REMARK 620 3 GLU B 187 OE2 82.6 44.6 REMARK 620 4 ADP B 326 O2B 90.8 177.4 132.9 REMARK 620 5 ADP B 326 O1A 169.8 88.6 102.5 92.1 REMARK 620 6 HOH B 369 O 88.9 99.8 55.7 77.7 101.2 REMARK 620 7 HOH B 370 O 77.1 80.0 121.0 102.4 92.8 166.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 325 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ADP B 324 O2B REMARK 620 2 ADP B 324 O1A 81.4 REMARK 620 3 HOH B 419 O 106.9 91.5 REMARK 620 N 1 2 DBREF 1PFK A 0 319 UNP P0A796 K6PF1_ECOLI 1 320 DBREF 1PFK B 0 319 UNP P0A796 K6PF1_ECOLI 1 320 SEQRES 1 A 320 MET ILE LYS LYS ILE GLY VAL LEU THR SER GLY GLY ASP SEQRES 2 A 320 ALA PRO GLY MET ASN ALA ALA ILE ARG GLY VAL VAL ARG SEQRES 3 A 320 SER ALA LEU THR GLU GLY LEU GLU VAL MET GLY ILE TYR SEQRES 4 A 320 ASP GLY TYR LEU GLY LEU TYR GLU ASP ARG MET VAL GLN SEQRES 5 A 320 LEU ASP ARG TYR SER VAL SER ASP MET ILE ASN ARG GLY SEQRES 6 A 320 GLY THR PHE LEU GLY SER ALA ARG PHE PRO GLU PHE ARG SEQRES 7 A 320 ASP GLU ASN ILE ARG ALA VAL ALA ILE GLU ASN LEU LYS SEQRES 8 A 320 LYS ARG GLY ILE ASP ALA LEU VAL VAL ILE GLY GLY ASP SEQRES 9 A 320 GLY SER TYR MET GLY ALA MET ARG LEU THR GLU MET GLY SEQRES 10 A 320 PHE PRO CYS ILE GLY LEU PRO GLY THR ILE ASP ASN ASP SEQRES 11 A 320 ILE LYS GLY THR ASP TYR THR ILE GLY PHE PHE THR ALA SEQRES 12 A 320 LEU SER THR VAL VAL GLU ALA ILE ASP ARG LEU ARG ASP SEQRES 13 A 320 THR SER SER SER HIS GLN ARG ILE SER VAL VAL GLU VAL SEQRES 14 A 320 MET GLY ARG TYR CYS GLY ASP LEU THR LEU ALA ALA ALA SEQRES 15 A 320 ILE ALA GLY GLY CYS GLU PHE VAL VAL VAL PRO GLU VAL SEQRES 16 A 320 GLU PHE SER ARG GLU ASP LEU VAL ASN GLU ILE LYS ALA SEQRES 17 A 320 GLY ILE ALA LYS GLY LYS LYS HIS ALA ILE VAL ALA ILE SEQRES 18 A 320 THR GLU HIS MET CYS ASP VAL ASP GLU LEU ALA HIS PHE SEQRES 19 A 320 ILE GLU LYS GLU THR GLY ARG GLU THR ARG ALA THR VAL SEQRES 20 A 320 LEU GLY HIS ILE GLN ARG GLY GLY SER PRO VAL PRO TYR SEQRES 21 A 320 ASP ARG ILE LEU ALA SER ARG MET GLY ALA TYR ALA ILE SEQRES 22 A 320 ASP LEU LEU LEU ALA GLY TYR GLY GLY ARG CYS VAL GLY SEQRES 23 A 320 ILE GLN ASN GLU GLN LEU VAL HIS HIS ASP ILE ILE ASP SEQRES 24 A 320 ALA ILE GLU ASN MET LYS ARG PRO PHE LYS GLY ASP TRP SEQRES 25 A 320 LEU ASP CYS ALA LYS LYS LEU TYR SEQRES 1 B 320 MET ILE LYS LYS ILE GLY VAL LEU THR SER GLY GLY ASP SEQRES 2 B 320 ALA PRO GLY MET ASN ALA ALA ILE ARG GLY VAL VAL ARG SEQRES 3 B 320 SER ALA LEU THR GLU GLY LEU GLU VAL MET GLY ILE TYR SEQRES 4 B 320 ASP GLY TYR LEU GLY LEU TYR GLU ASP ARG MET VAL GLN SEQRES 5 B 320 LEU ASP ARG TYR SER VAL SER ASP MET ILE ASN ARG GLY SEQRES 6 B 320 GLY THR PHE LEU GLY SER ALA ARG PHE PRO GLU PHE ARG SEQRES 7 B 320 ASP GLU ASN ILE ARG ALA VAL ALA ILE GLU ASN LEU LYS SEQRES 8 B 320 LYS ARG GLY ILE ASP ALA LEU VAL VAL ILE GLY GLY ASP SEQRES 9 B 320 GLY SER TYR MET GLY ALA MET ARG LEU THR GLU MET GLY SEQRES 10 B 320 PHE PRO CYS ILE GLY LEU PRO GLY THR ILE ASP ASN ASP SEQRES 11 B 320 ILE LYS GLY THR ASP TYR THR ILE GLY PHE PHE THR ALA SEQRES 12 B 320 LEU SER THR VAL VAL GLU ALA ILE ASP ARG LEU ARG ASP SEQRES 13 B 320 THR SER SER SER HIS GLN ARG ILE SER VAL VAL GLU VAL SEQRES 14 B 320 MET GLY ARG TYR CYS GLY ASP LEU THR LEU ALA ALA ALA SEQRES 15 B 320 ILE ALA GLY GLY CYS GLU PHE VAL VAL VAL PRO GLU VAL SEQRES 16 B 320 GLU PHE SER ARG GLU ASP LEU VAL ASN GLU ILE LYS ALA SEQRES 17 B 320 GLY ILE ALA LYS GLY LYS LYS HIS ALA ILE VAL ALA ILE SEQRES 18 B 320 THR GLU HIS MET CYS ASP VAL ASP GLU LEU ALA HIS PHE SEQRES 19 B 320 ILE GLU LYS GLU THR GLY ARG GLU THR ARG ALA THR VAL SEQRES 20 B 320 LEU GLY HIS ILE GLN ARG GLY GLY SER PRO VAL PRO TYR SEQRES 21 B 320 ASP ARG ILE LEU ALA SER ARG MET GLY ALA TYR ALA ILE SEQRES 22 B 320 ASP LEU LEU LEU ALA GLY TYR GLY GLY ARG CYS VAL GLY SEQRES 23 B 320 ILE GLN ASN GLU GLN LEU VAL HIS HIS ASP ILE ILE ASP SEQRES 24 B 320 ALA ILE GLU ASN MET LYS ARG PRO PHE LYS GLY ASP TRP SEQRES 25 B 320 LEU ASP CYS ALA LYS LYS LEU TYR HET FBP A 323 20 HET MG A 325 1 HET MG A 327 1 HET ADP A 324 27 HET ADP A 326 27 HET FBP B 323 20 HET MG B 325 1 HET MG B 327 1 HET ADP B 324 27 HET ADP B 326 27 HETNAM FBP 1,6-DI-O-PHOSPHONO-BETA-D-FRUCTOFURANOSE HETNAM MG MAGNESIUM ION HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETSYN FBP BETA-FRUCTOSE-1,6-DIPHOSPHATE; FRUCTOSE-1,6- HETSYN 2 FBP BISPHOSPHATE; 1,6-DI-O-PHOSPHONO-BETA-D-FRUCTOSE; 1,6- HETSYN 3 FBP DI-O-PHOSPHONO-D-FRUCTOSE; 1,6-DI-O-PHOSPHONO-FRUCTOSE FORMUL 3 FBP 2(C6 H14 O12 P2) FORMUL 4 MG 4(MG 2+) FORMUL 6 ADP 4(C10 H15 N5 O10 P2) FORMUL 13 HOH *277(H2 O) HELIX 1 1A GLY A 15 GLU A 30 13/10 END 16 HELIX 2 2A GLY A 40 ASP A 47 13/10 BEGINNING AND END 8 HELIX 3 4AA PHE A 73 ASP A 78 5 6 HELIX 4 4A ASP A 78 GLY A 93 13/10 END 16 HELIX 5 5A GLY A 102 GLY A 116 1 15 HELIX 6 6A GLY A 138 HIS A 160 1 23 HELIX 7 7A THR A 177 GLY A 185 1 9 HELIX 8 8A SER A 197 GLY A 212 13/10 BEGINNING AND END 16 HELIX 9 9A ASP A 226 GLY A 239 1 14 HELIX 10 10A GLY A 248 ARG A 252 5 5 HELIX 11 11A VAL A 257 GLY A 278 13/10 END 22 HELIX 12 12A ASP A 295 ASN A 302 1 8 HELIX 13 13A LYS A 308 TYR A 319 1 12 HELIX 14 1B GLY B 15 GLU B 30 13/10 END 16 HELIX 15 2B GLY B 40 ASP B 47 13/10 BEGINNING AND END 8 HELIX 16 4AB PHE B 73 ASP B 78 5 6 HELIX 17 4B ASP B 78 GLY B 93 13/10 END 16 HELIX 18 5B GLY B 102 GLY B 116 1 15 HELIX 19 6B GLY B 138 HIS B 160 1 23 HELIX 20 7B THR B 177 GLY B 185 1 9 HELIX 21 8B SER B 197 GLY B 212 13/10 BEGINNING AND END 16 HELIX 22 9B ASP B 226 GLY B 239 1 14 HELIX 23 10B GLY B 248 ARG B 252 5 5 HELIX 24 11B VAL B 257 GLY B 278 13/10 END 22 HELIX 25 12B ASP B 295 ASN B 302 1 8 HELIX 26 13B LYS B 308 TYR B 319 1 12 SHEET 1 S1A 7 ARG A 48 LEU A 52 0 SHEET 2 S1A 7 GLU A 33 TYR A 38 -1 O GLY A 36 N VAL A 50 SHEET 3 S1A 7 LYS A 2 SER A 9 1 O VAL A 6 N ILE A 37 SHEET 4 S1A 7 ALA A 96 GLY A 101 1 O VAL A 98 N LEU A 7 SHEET 5 S1A 7 PRO A 118 LEU A 122 1 O ILE A 120 N VAL A 99 SHEET 6 S1A 7 GLY A 281 GLN A 287 1 O ARG A 282 N GLY A 121 SHEET 7 S1A 7 GLN A 290 ASP A 295 -1 O HIS A 294 N CYS A 283 SHEET 1 S2A 4 PHE A 188 VAL A 190 0 SHEET 2 S2A 4 ALA A 216 THR A 221 1 O ALA A 219 N VAL A 190 SHEET 3 S2A 4 ARG A 162 VAL A 168 1 O VAL A 166 N ILE A 220 SHEET 4 S2A 4 GLU A 241 LEU A 247 1 O THR A 245 N GLU A 167 SHEET 1 S1B 7 ARG B 48 LEU B 52 0 SHEET 2 S1B 7 GLU B 33 TYR B 38 -1 O GLY B 36 N VAL B 50 SHEET 3 S1B 7 LYS B 2 SER B 9 1 O VAL B 6 N ILE B 37 SHEET 4 S1B 7 ALA B 96 GLY B 101 1 O VAL B 98 N LEU B 7 SHEET 5 S1B 7 PRO B 118 LEU B 122 1 O ILE B 120 N VAL B 99 SHEET 6 S1B 7 GLY B 281 GLN B 287 1 O ARG B 282 N GLY B 121 SHEET 7 S1B 7 GLN B 290 ASP B 295 -1 O HIS B 294 N CYS B 283 SHEET 1 S2B 4 PHE B 188 VAL B 190 0 SHEET 2 S2B 4 ALA B 216 THR B 221 1 O ALA B 219 N VAL B 190 SHEET 3 S2B 4 ARG B 162 VAL B 168 1 O VAL B 166 N ILE B 220 SHEET 4 S2B 4 GLU B 241 LEU B 247 1 O THR B 245 N GLU B 167 LINK OD2 ASP A 103 MG MG A 325 1555 1555 1.95 LINK O GLY A 185 MG MG A 327 1555 1555 2.25 LINK OE1 GLU A 187 MG MG A 327 1555 1555 2.14 LINK O2P FBP A 323 MG MG A 325 1555 1555 2.04 LINK O2B ADP A 324 MG MG A 325 1555 1555 2.19 LINK MG MG A 325 O HOH A 386 1555 1555 2.25 LINK MG MG A 325 O HOH A 402 1555 1555 2.43 LINK MG MG A 325 O HOH A 417 1555 1555 2.38 LINK O2B ADP A 326 MG MG A 327 1555 1555 2.17 LINK O1A ADP A 326 MG MG A 327 1555 1555 2.42 LINK MG MG A 327 O HOH A 368 1555 1555 1.96 LINK MG MG A 327 O HOH A 369 1555 1555 1.91 LINK O GLY B 185 MG MG B 327 1555 1555 2.30 LINK OE1 GLU B 187 MG MG B 327 1555 1555 2.21 LINK OE2 GLU B 187 MG MG B 327 1555 1555 3.08 LINK O2B ADP B 324 MG MG B 325 1555 1555 2.72 LINK O1A ADP B 324 MG MG B 325 1555 1555 2.26 LINK MG MG B 325 O HOH B 419 1555 1555 2.37 LINK O2B ADP B 326 MG MG B 327 1555 1555 2.23 LINK O1A ADP B 326 MG MG B 327 1555 1555 2.15 LINK MG MG B 327 O HOH B 369 1555 1555 2.17 LINK MG MG B 327 O HOH B 370 1555 1555 2.05 CRYST1 112.300 85.400 77.100 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008905 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011710 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012970 0.00000 MTRIX1 1 0.542870 0.839820 0.000000 0.00000 1 MTRIX2 1 0.839820 -0.542870 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 -1.000000 -5.42690 1