HEADER TRANSFERASE 30-MAY-03 1PIE TITLE CRYSTAL STRUCTURE OF LACTOCOCCUS LACTIS GALACTOKINASE COMPLEXED WITH TITLE 2 GALACTOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GALACTOKINASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GALACTOSE KINASE; COMPND 5 EC: 2.7.1.6; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACTOCOCCUS LACTIS; SOURCE 3 ORGANISM_TAXID: 1358; SOURCE 4 GENE: GALK; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ROSETTA(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS GALACTOSE, GALACTOSEMIA, KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.B.THODEN,H.M.HOLDEN REVDAT 5 14-FEB-24 1PIE 1 HETSYN REVDAT 4 29-JUL-20 1PIE 1 COMPND REMARK SEQADV HETNAM REVDAT 4 2 1 SITE REVDAT 3 24-FEB-09 1PIE 1 VERSN REVDAT 2 11-NOV-03 1PIE 1 JRNL REVDAT 1 23-SEP-03 1PIE 0 JRNL AUTH J.B.THODEN,H.M.HOLDEN JRNL TITL MOLECULAR STRUCTURE OF GALACTOKINASE JRNL REF J.BIOL.CHEM. V. 278 33305 2003 JRNL REFN ISSN 0021-9258 JRNL PMID 12796487 JRNL DOI 10.1074/JBC.M304789200 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TNT REMARK 3 AUTHORS : TRONRUD,TEN EYCK,MATTHEWS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 28536 REMARK 3 REMARK 3 USING DATA ABOVE SIGMA CUTOFF. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2896 REMARK 3 REMARK 3 USING ALL DATA, NO SIGMA CUTOFF. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : 0.2040 REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 28536 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2982 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 17 REMARK 3 SOLVENT ATOMS : 164 REMARK 3 REMARK 3 WILSON B VALUE (FROM FCALC, A**2) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. RMS WEIGHT COUNT REMARK 3 BOND LENGTHS (A) : 0.013 ; NULL ; NULL REMARK 3 BOND ANGLES (DEGREES) : 2.590 ; NULL ; NULL REMARK 3 TORSION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES (A) : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES (A) : NULL ; NULL ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS (A**2) : NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS (A) : NULL ; NULL ; NULL REMARK 3 REMARK 3 INCORRECT CHIRAL-CENTERS (COUNT) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 RESTRAINT LIBRARIES. REMARK 3 STEREOCHEMISTRY : ENGH & HUBER REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1PIE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-JUN-03. REMARK 100 THE DEPOSITION ID IS D_1000019340. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-APR-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97932, 0.97951, 0.96411, REMARK 200 0.65255 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : SBC-2 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000, D*TREK REMARK 200 DATA SCALING SOFTWARE : D*TREK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28616 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 14.00 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06700 REMARK 200 FOR THE DATA SET : 75.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.17 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 9.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.21400 REMARK 200 FOR SHELL : 9.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM PHOSPHATE, POTASSIUM PHOSPHATE, REMARK 280 CHES, GALACTOSE, PH 9, BATCH, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 71.70000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 71.70000 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 71.70000 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 71.70000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 71.70000 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 71.70000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 71.70000 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 71.70000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 71.70000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 71.70000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 71.70000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 71.70000 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 71.70000 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 71.70000 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 71.70000 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 71.70000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 71.70000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 71.70000 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 71.70000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 71.70000 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 71.70000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 71.70000 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 71.70000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 71.70000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 71.70000 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 71.70000 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 71.70000 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 71.70000 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 71.70000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 71.70000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 71.70000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 71.70000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 71.70000 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 71.70000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 71.70000 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 71.70000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ILE A 3 REMARK 465 VAL A 4 REMARK 465 VAL A 5 REMARK 465 GLU A 6 REMARK 465 ASN A 7 REMARK 465 SER A 8 REMARK 465 ASP A 397 REMARK 465 VAL A 398 REMARK 465 GLU A 399 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 16 CG CD OE1 OE2 REMARK 470 LYS A 17 CG CD CE NZ REMARK 470 GLU A 20 CG CD OE1 OE2 REMARK 470 LYS A 26 CG CD CE NZ REMARK 470 LYS A 204 CG CD CE NZ REMARK 470 LEU A 396 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 29 CD GLU A 29 OE2 0.086 REMARK 500 GLU A 42 CD GLU A 42 OE2 0.071 REMARK 500 GLU A 68 CD GLU A 68 OE2 0.086 REMARK 500 GLU A 77 CD GLU A 77 OE2 0.066 REMARK 500 GLU A 86 CD GLU A 86 OE2 0.080 REMARK 500 GLU A 93 CD GLU A 93 OE2 0.072 REMARK 500 GLU A 129 CD GLU A 129 OE2 0.076 REMARK 500 GLU A 162 CD GLU A 162 OE2 0.070 REMARK 500 GLU A 191 CD GLU A 191 OE2 0.069 REMARK 500 GLU A 211 CD GLU A 211 OE2 0.079 REMARK 500 GLU A 230 CD GLU A 230 OE2 0.084 REMARK 500 GLU A 235 CD GLU A 235 OE2 0.066 REMARK 500 GLU A 262 CD GLU A 262 OE2 0.084 REMARK 500 GLU A 274 CD GLU A 274 OE2 0.101 REMARK 500 GLU A 286 CD GLU A 286 OE2 0.080 REMARK 500 GLU A 307 CD GLU A 307 OE2 0.071 REMARK 500 GLU A 326 CD GLU A 326 OE2 0.068 REMARK 500 GLU A 332 CD GLU A 332 OE2 0.066 REMARK 500 GLU A 375 CD GLU A 375 OE2 0.083 REMARK 500 GLU A 376 CD GLU A 376 OE2 0.073 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 36 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ASP A 45 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP A 45 CB - CG - OD2 ANGL. DEV. = -7.8 DEGREES REMARK 500 ARG A 67 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ASP A 69 CB - CG - OD2 ANGL. DEV. = -6.1 DEGREES REMARK 500 ASP A 88 CB - CG - OD2 ANGL. DEV. = -6.9 DEGREES REMARK 500 ASP A 90 CB - CG - OD2 ANGL. DEV. = -6.4 DEGREES REMARK 500 ASP A 96 CB - CG - OD2 ANGL. DEV. = -6.0 DEGREES REMARK 500 ASP A 119 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP A 152 CB - CG - OD2 ANGL. DEV. = -5.4 DEGREES REMARK 500 PHE A 154 CB - CG - CD2 ANGL. DEV. = -4.3 DEGREES REMARK 500 ASP A 183 CB - CG - OD1 ANGL. DEV. = 8.2 DEGREES REMARK 500 ASP A 183 CB - CG - OD2 ANGL. DEV. = -7.1 DEGREES REMARK 500 ASP A 199 CB - CG - OD1 ANGL. DEV. = 7.5 DEGREES REMARK 500 ASP A 199 CB - CG - OD2 ANGL. DEV. = -6.9 DEGREES REMARK 500 ASP A 214 CB - CG - OD1 ANGL. DEV. = 8.4 DEGREES REMARK 500 ASP A 214 CB - CG - OD2 ANGL. DEV. = -9.1 DEGREES REMARK 500 ASP A 216 CB - CG - OD1 ANGL. DEV. = 7.6 DEGREES REMARK 500 ASP A 216 CB - CG - OD2 ANGL. DEV. = -7.3 DEGREES REMARK 500 THR A 240 CA - CB - CG2 ANGL. DEV. = -8.8 DEGREES REMARK 500 ARG A 241 NE - CZ - NH2 ANGL. DEV. = -5.3 DEGREES REMARK 500 ARG A 246 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG A 246 NE - CZ - NH2 ANGL. DEV. = -4.3 DEGREES REMARK 500 ASP A 252 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP A 252 CB - CG - OD2 ANGL. DEV. = -7.5 DEGREES REMARK 500 ASP A 265 CB - CG - OD2 ANGL. DEV. = -7.8 DEGREES REMARK 500 ASP A 273 CB - CG - OD2 ANGL. DEV. = -7.1 DEGREES REMARK 500 ASP A 318 CB - CG - OD1 ANGL. DEV. = 6.5 DEGREES REMARK 500 ASP A 328 CB - CG - OD1 ANGL. DEV. = 6.5 DEGREES REMARK 500 ASP A 328 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 ASP A 361 CB - CG - OD1 ANGL. DEV. = 9.6 DEGREES REMARK 500 ASP A 361 CB - CG - OD2 ANGL. DEV. = -7.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 20 -77.84 -42.07 REMARK 500 ASP A 24 -156.32 -88.92 REMARK 500 THR A 25 60.82 -163.28 REMARK 500 LEU A 89 7.97 -46.66 REMARK 500 SER A 137 53.70 71.24 REMARK 500 ASN A 157 55.92 -116.89 REMARK 500 ARG A 213 -127.23 70.63 REMARK 500 GLU A 230 47.71 82.19 REMARK 500 THR A 323 -93.79 -91.35 REMARK 500 LYS A 395 42.15 -74.45 REMARK 500 REMARK 500 REMARK: NULL DBREF 1PIE A 1 399 UNP Q9R7D7 GAL1_LACLA 1 399 SEQADV 1PIE MET A -19 UNP Q9R7D7 CLONING ARTIFACT SEQADV 1PIE GLY A -18 UNP Q9R7D7 CLONING ARTIFACT SEQADV 1PIE SER A -17 UNP Q9R7D7 CLONING ARTIFACT SEQADV 1PIE SER A -16 UNP Q9R7D7 CLONING ARTIFACT SEQADV 1PIE HIS A -15 UNP Q9R7D7 CLONING ARTIFACT SEQADV 1PIE HIS A -14 UNP Q9R7D7 CLONING ARTIFACT SEQADV 1PIE HIS A -13 UNP Q9R7D7 CLONING ARTIFACT SEQADV 1PIE HIS A -12 UNP Q9R7D7 CLONING ARTIFACT SEQADV 1PIE HIS A -11 UNP Q9R7D7 CLONING ARTIFACT SEQADV 1PIE HIS A -10 UNP Q9R7D7 CLONING ARTIFACT SEQADV 1PIE SER A -9 UNP Q9R7D7 CLONING ARTIFACT SEQADV 1PIE SER A -8 UNP Q9R7D7 CLONING ARTIFACT SEQADV 1PIE GLY A -7 UNP Q9R7D7 CLONING ARTIFACT SEQADV 1PIE LEU A -6 UNP Q9R7D7 CLONING ARTIFACT SEQADV 1PIE VAL A -5 UNP Q9R7D7 CLONING ARTIFACT SEQADV 1PIE PRO A -4 UNP Q9R7D7 CLONING ARTIFACT SEQADV 1PIE ARG A -3 UNP Q9R7D7 CLONING ARTIFACT SEQADV 1PIE GLY A -2 UNP Q9R7D7 CLONING ARTIFACT SEQADV 1PIE SER A -1 UNP Q9R7D7 CLONING ARTIFACT SEQADV 1PIE HIS A 0 UNP Q9R7D7 CLONING ARTIFACT SEQADV 1PIE GLU A 197 UNP Q9R7D7 LEU 197 CLONING ARTIFACT SEQADV 1PIE ARG A 367 UNP Q9R7D7 GLU 367 CLONING ARTIFACT SEQRES 1 A 419 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 419 LEU VAL PRO ARG GLY SER HIS MET SER ILE VAL VAL GLU SEQRES 3 A 419 ASN SER THR VAL LEU SER ALA LEU THR GLU LYS PHE ALA SEQRES 4 A 419 GLU VAL PHE GLY ASP THR LYS GLU VAL GLU TYR PHE PHE SEQRES 5 A 419 SER PRO GLY ARG ILE ASN LEU ILE GLY GLU HIS THR ASP SEQRES 6 A 419 TYR ASN GLY GLY TYR VAL PHE PRO ALA SER ILE THR ILE SEQRES 7 A 419 GLY THR THR GLY LEU ALA ARG LEU ARG GLU ASP LYS LYS SEQRES 8 A 419 VAL LYS LEU TYR SER GLU ASN PHE PRO LYS LEU GLY VAL SEQRES 9 A 419 ILE GLU PHE ASP LEU ASP GLU VAL GLU LYS LYS ASP GLY SEQRES 10 A 419 GLU LEU TRP SER ASN TYR VAL LYS GLY MET ILE VAL MET SEQRES 11 A 419 LEU LYS GLY ALA GLY TYR GLU ILE ASP LYS GLY PHE GLU SEQRES 12 A 419 LEU LEU ILE LYS GLY GLU ILE PRO THR ALA SER GLY LEU SEQRES 13 A 419 SER SER SER ALA SER LEU GLU LEU LEU VAL GLY VAL VAL SEQRES 14 A 419 LEU ASP ASP LEU PHE ASN LEU ASN VAL PRO ARG LEU GLU SEQRES 15 A 419 LEU VAL GLN LEU GLY GLN LYS THR GLU ASN ASP TYR ILE SEQRES 16 A 419 GLY VAL ASN SER GLY ILE LEU ASP GLN PHE ALA ILE GLY SEQRES 17 A 419 PHE GLY GLU VAL LYS LYS ALA ILE GLU LEU ASP CYS ASN SEQRES 18 A 419 THR LEU LYS TYR GLU MET VAL PRO VAL GLU LEU ARG ASP SEQRES 19 A 419 TYR ASP ILE VAL ILE MET ASN THR ASN LYS PRO ARG ALA SEQRES 20 A 419 LEU THR GLU SER LYS TYR ASN GLU ARG PHE ALA GLU THR SEQRES 21 A 419 ARG GLU ALA LEU LYS ARG MET GLN THR ARG LEU ASP ILE SEQRES 22 A 419 GLN SER LEU GLY GLU LEU SER ASN GLU GLU PHE ASP ALA SEQRES 23 A 419 ASN THR ASP LEU ILE GLY ASP GLU THR LEU ILE LYS ARG SEQRES 24 A 419 ALA ARG HIS ALA VAL TYR GLU ASN ASN ARG THR LYS ILE SEQRES 25 A 419 ALA GLN LYS ALA PHE VAL ALA GLY ASN LEU THR LYS PHE SEQRES 26 A 419 GLY GLU LEU LEU ASN ALA SER HIS ALA SER LEU LYS ASP SEQRES 27 A 419 ASP TYR GLU VAL THR GLY LEU GLU LEU ASP THR LEU ALA SEQRES 28 A 419 GLU THR ALA GLN LYS GLN ALA GLY VAL LEU GLY ALA ARG SEQRES 29 A 419 MET THR GLY ALA GLY PHE GLY GLY CYS ALA ILE ALA LEU SEQRES 30 A 419 VAL ALA HIS ASP ASN VAL SER ALA PHE ARG LYS ALA VAL SEQRES 31 A 419 GLY GLN VAL TYR GLU GLU VAL VAL GLY TYR PRO ALA SER SEQRES 32 A 419 PHE TYR VAL ALA GLN ILE GLY SER GLY SER THR LYS LEU SEQRES 33 A 419 ASP VAL GLU HET GLA A 400 12 HET PO4 A 401 5 HETNAM GLA ALPHA-D-GALACTOPYRANOSE HETNAM PO4 PHOSPHATE ION HETSYN GLA ALPHA-D-GALACTOSE; D-GALACTOSE; GALACTOSE; ALPHA D- HETSYN 2 GLA GALACTOSE FORMUL 2 GLA C6 H12 O6 FORMUL 3 PO4 O4 P 3- FORMUL 4 HOH *164(H2 O) HELIX 1 1 THR A 9 GLY A 23 1 15 HELIX 2 2 PHE A 79 GLY A 83 5 5 HELIX 3 3 TRP A 100 ALA A 114 1 15 HELIX 4 4 SER A 137 PHE A 154 1 18 HELIX 5 5 PRO A 159 TYR A 174 1 16 HELIX 6 6 ILE A 181 GLY A 190 1 10 HELIX 7 7 GLU A 230 LEU A 251 1 22 HELIX 8 8 SER A 255 LEU A 259 5 5 HELIX 9 9 SER A 260 ASN A 267 1 8 HELIX 10 10 THR A 268 ILE A 271 5 4 HELIX 11 11 ASP A 273 GLY A 300 1 28 HELIX 12 12 ASN A 301 ASP A 319 1 19 HELIX 13 13 GLY A 324 GLN A 337 1 14 HELIX 14 14 ASN A 362 GLY A 379 1 18 SHEET 1 A 5 GLU A 29 ILE A 40 0 SHEET 2 A 5 TYR A 50 LEU A 66 -1 O THR A 60 N SER A 33 SHEET 3 A 5 PHE A 122 GLY A 128 -1 O LYS A 127 N THR A 61 SHEET 4 A 5 LYS A 71 SER A 76 1 N LYS A 73 O LEU A 124 SHEET 5 A 5 ILE A 85 ASP A 88 -1 O ILE A 85 N LEU A 74 SHEET 1 B 4 GLU A 29 ILE A 40 0 SHEET 2 B 4 TYR A 50 LEU A 66 -1 O THR A 60 N SER A 33 SHEET 3 B 4 LYS A 194 ASP A 199 -1 O LEU A 198 N VAL A 51 SHEET 4 B 4 TYR A 205 PRO A 209 -1 O VAL A 208 N ALA A 195 SHEET 1 C 4 VAL A 340 MET A 345 0 SHEET 2 C 4 CYS A 353 ALA A 359 -1 O ILE A 355 N ARG A 344 SHEET 3 C 4 TYR A 215 ASN A 221 -1 N VAL A 218 O ALA A 356 SHEET 4 C 4 SER A 383 VAL A 386 -1 O TYR A 385 N ILE A 219 CRYST1 143.400 143.400 143.400 90.00 90.00 90.00 I 2 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006974 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006974 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006974 0.00000