HEADER TRANSFERASE/OXIDOREDUCTASE/LYASE 03-JUN-03 1PJS TITLE THE CO-CRYSTAL STRUCTURE OF CYSG, THE MULTIFUNCTIONAL TITLE 2 METHYLTRANSFERASE/DEHYDROGENASE/FERROCHELATASE FOR SIROHEME TITLE 3 SYNTHESIS, IN COMPLEX WITH IT NAD COFACTOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: SIROHEME SYNTHASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CYSG; COMPND 5 EC: 2.1.1.107, 1.-.-.-, 4.99.1.-; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: RESIDUES 1-212 (CYSGB) ARE A COMPND 8 DEHYDROGENASE/FERROCHELATASE, RESIDUES 213-457 (CYSGA) ARE A COMPND 9 BISMETHYLTRANSFERASE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA TYPHIMURIUM; SOURCE 3 ORGANISM_TAXID: 602; SOURCE 4 GENE: CYSG OR STM3477; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: LMG194; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PBR522; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PBAD-HIS-MYC (INVITROGEN) KEYWDS ROSSMANN FOLD, NUCLEOTIDE BINDING MOTIF, SAH, SAM, NAD, KEYWDS 2 PHOSPHOSERINE, TRANSFERASE-OXIDOREDUCTASE-LYASE COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.E.STROUPE,H.K.LEECH,D.S.DANIELS,M.J.WARREN,E.D.GETZOFF REVDAT 4 16-AUG-23 1PJS 1 REMARK SEQADV LINK REVDAT 3 12-NOV-14 1PJS 1 KEYWDS REVDAT 2 24-FEB-09 1PJS 1 VERSN REVDAT 1 02-DEC-03 1PJS 0 JRNL AUTH M.E.STROUPE,H.K.LEECH,D.S.DANIELS,M.J.WARREN,E.D.GETZOFF JRNL TITL CYSG STRUCTURE REVEALS TETRAPYRROLE-BINDING FEATURES AND JRNL TITL 2 NOVEL REGULATION OF SIROHEME BIOSYNTHESIS. JRNL REF NAT.STRUCT.BIOL. V. 10 1064 2003 JRNL REFN ISSN 1072-8368 JRNL PMID 14595395 JRNL DOI 10.1038/NSB1007 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.58 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.7 REMARK 3 NUMBER OF REFLECTIONS : 36154 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.239 REMARK 3 FREE R VALUE : 0.281 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3603 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.55 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 5424 REMARK 3 BIN R VALUE (WORKING SET) : 0.3210 REMARK 3 BIN FREE R VALUE : 0.3690 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.70 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 584 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.015 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6933 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 165 REMARK 3 SOLVENT ATOMS : 212 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.27000 REMARK 3 B22 (A**2) : -7.47000 REMARK 3 B33 (A**2) : 4.19000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.35 REMARK 3 ESD FROM SIGMAA (A) : 0.36 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.41 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.45 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.900 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.50 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.050 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.34 REMARK 3 BSOL : 34.31 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : CONAD-OTHER.PAR REMARK 3 PARAMETER FILE 4 : TMP.PARAM REMARK 3 PARAMETER FILE 5 : ION.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : CONAD-OTHER.TOP REMARK 3 TOPOLOGY FILE 4 : TMP.TOP REMARK 3 TOPOLOGY FILE 5 : ION.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1PJS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-JUN-03. REMARK 100 THE DEPOSITION ID IS D_1000019371. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-MAR-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36207 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 22.580 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07900 REMARK 200 FOR THE DATA SET : 14.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.41500 REMARK 200 FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1PJQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG400, PHOSPHATE/CITRATE, SODIUM REMARK 280 CHLORIDE, 2-MERCAPTOETHANOL, NAD, PH 5.0, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.06200 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.08900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 60.34300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 65.08900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.06200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 60.34300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE ASYMMETRIC UNIT CONTAINS A SINGLE HOMODIMER. EACH OF REMARK 300 CYSG'S MODULES (CYSGB, RESIDUES 1-212, AND CYSGA, RESIDUES 213-457) REMARK 300 ARE HOMODIMERS. EACH SUBUNIT CONTAINS HALF OF CYSGB AND HALF OF REMARK 300 CYSGA, EACH OF WHICH IS RELATED TO ITS DIMER PARTNER BY A UNIQUE REMARK 300 NON-CRYSTALLOGRAPHIC TWO-FOLD SYMMETRY AXIS. CYSG HAS TWO DISTINCT REMARK 300 NON-CRYSTALLOGRAPHIC TWO-FOLD SYMMETRY AXES, ONE FOR EACH REMARK 300 HOMODIMERIC MODULE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 15430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -75.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 269 REMARK 465 LYS A 270 REMARK 465 ARG A 271 REMARK 465 ALA A 272 REMARK 465 GLY A 273 REMARK 465 TYR A 274 REMARK 465 HIS A 275 REMARK 465 CYS A 276 REMARK 465 HIS A 359 REMARK 465 LEU A 360 REMARK 465 LYS A 361 REMARK 465 THR A 362 REMARK 465 GLY A 363 REMARK 465 GLY A 364 REMARK 465 LEU B 360 REMARK 465 LYS B 361 REMARK 465 THR B 362 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN A 351 NH2 ARG B 309 1.94 REMARK 500 O1A NAD A 502 O HOH A 604 2.11 REMARK 500 O2A NAD A 502 O HOH A 595 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS B 292 O1A NAD B 504 3455 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASN A 194 N - CA - C ANGL. DEV. = -17.1 DEGREES REMARK 500 GLY A 308 N - CA - C ANGL. DEV. = -16.7 DEGREES REMARK 500 GLU A 374 CA - C - N ANGL. DEV. = -15.7 DEGREES REMARK 500 LYS A 375 CA - CB - CG ANGL. DEV. = -17.4 DEGREES REMARK 500 ASP B 104 N - CA - CB ANGL. DEV. = 16.1 DEGREES REMARK 500 ASP B 104 N - CA - C ANGL. DEV. = -16.8 DEGREES REMARK 500 ARG B 260 N - CA - C ANGL. DEV. = 17.9 DEGREES REMARK 500 ALA B 263 N - CA - C ANGL. DEV. = -28.6 DEGREES REMARK 500 ARG B 309 N - CA - C ANGL. DEV. = 27.4 DEGREES REMARK 500 GLU B 365 N - CA - C ANGL. DEV. = 20.8 DEGREES REMARK 500 LEU B 366 N - CA - C ANGL. DEV. = 23.3 DEGREES REMARK 500 GLU B 374 N - CA - C ANGL. DEV. = 24.5 DEGREES REMARK 500 GLU B 374 CA - C - N ANGL. DEV. = -15.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 109 -154.20 60.91 REMARK 500 ARG A 119 44.14 -146.29 REMARK 500 SER A 120 136.08 -37.82 REMARK 500 PRO A 148 154.21 -48.60 REMARK 500 LYS A 167 31.24 -90.28 REMARK 500 GLN A 168 -30.14 -141.48 REMARK 500 ALA A 195 63.42 -54.09 REMARK 500 PRO A 278 137.83 -33.05 REMARK 500 PHE A 307 12.82 59.37 REMARK 500 ARG A 347 -56.81 -9.13 REMARK 500 ASP A 348 1.53 -157.57 REMARK 500 LYS A 375 22.87 178.21 REMARK 500 THR A 412 -9.63 68.01 REMARK 500 ASP A 449 69.03 -104.49 REMARK 500 LYS A 450 -17.10 -165.51 REMARK 500 ASP B 104 -53.73 -168.57 REMARK 500 SER B 120 130.09 -33.20 REMARK 500 ASP B 196 76.97 -102.63 REMARK 500 ARG B 261 102.42 75.01 REMARK 500 ALA B 272 12.23 44.29 REMARK 500 ARG B 309 79.77 -54.84 REMARK 500 GLU B 315 5.63 -68.02 REMARK 500 HIS B 319 2.30 -164.63 REMARK 500 ARG B 347 -52.29 -21.15 REMARK 500 TYR B 349 -45.13 -25.96 REMARK 500 GLN B 351 41.58 -155.25 REMARK 500 LEU B 366 104.70 -15.52 REMARK 500 ASP B 367 85.20 -55.71 REMARK 500 LYS B 375 24.48 177.54 REMARK 500 THR B 412 -2.01 71.71 REMARK 500 LEU B 426 -70.32 -47.55 REMARK 500 TRP B 453 -19.91 -140.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAH A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAH B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 506 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1PJQ RELATED DB: PDB REMARK 900 NATIVE CYSG STRUCTURE REMARK 900 RELATED ID: 1PJT RELATED DB: PDB REMARK 900 SER128ALA POINT-MUTANT VARIANT OF CYSG DBREF 1PJS A 1 457 UNP P25924 CYSG_SALTY 1 457 DBREF 1PJS B 1 457 UNP P25924 CYSG_SALTY 1 457 SEQADV 1PJS SEP A 128 UNP P25924 SER 128 MODIFIED RESIDUE SEQADV 1PJS SEP B 128 UNP P25924 SER 128 MODIFIED RESIDUE SEQRES 1 A 457 MET ASP HIS LEU PRO ILE PHE CYS GLN LEU ARG ASP ARG SEQRES 2 A 457 ASP CYS LEU ILE VAL GLY GLY GLY ASP VAL ALA GLU ARG SEQRES 3 A 457 LYS ALA ARG LEU LEU LEU GLU ALA GLY ALA ARG LEU THR SEQRES 4 A 457 VAL ASN ALA LEU THR PHE ILE PRO GLN PHE THR VAL TRP SEQRES 5 A 457 ALA ASN GLU GLY MET LEU THR LEU VAL GLU GLY PRO PHE SEQRES 6 A 457 ASP GLU THR LEU LEU ASP SER CYS TRP LEU ALA ILE ALA SEQRES 7 A 457 ALA THR ASP ASP ASP THR VAL ASN GLN ARG VAL SER ASP SEQRES 8 A 457 ALA ALA GLU SER ARG ARG ILE PHE CYS ASN VAL VAL ASP SEQRES 9 A 457 ALA PRO LYS ALA ALA SER PHE ILE MET PRO SER ILE ILE SEQRES 10 A 457 ASP ARG SER PRO LEU MET VAL ALA VAL SER SEP GLY GLY SEQRES 11 A 457 THR SER PRO VAL LEU ALA ARG LEU LEU ARG GLU LYS LEU SEQRES 12 A 457 GLU SER LEU LEU PRO GLN HIS LEU GLY GLN VAL ALA ARG SEQRES 13 A 457 TYR ALA GLY GLN LEU ARG ALA ARG VAL LYS LYS GLN PHE SEQRES 14 A 457 ALA THR MET GLY GLU ARG ARG ARG PHE TRP GLU LYS PHE SEQRES 15 A 457 PHE VAL ASN ASP ARG LEU ALA GLN SER LEU ALA ASN ALA SEQRES 16 A 457 ASP GLU LYS ALA VAL ASN ALA THR THR GLU ARG LEU PHE SEQRES 17 A 457 SER GLU PRO LEU ASP HIS ARG GLY GLU VAL VAL LEU VAL SEQRES 18 A 457 GLY ALA GLY PRO GLY ASP ALA GLY LEU LEU THR LEU LYS SEQRES 19 A 457 GLY LEU GLN GLN ILE GLN GLN ALA ASP ILE VAL VAL TYR SEQRES 20 A 457 ASP ARG LEU VAL SER ASP ASP ILE MET ASN LEU VAL ARG SEQRES 21 A 457 ARG ASP ALA ASP ARG VAL PHE VAL GLY LYS ARG ALA GLY SEQRES 22 A 457 TYR HIS CYS VAL PRO GLN GLU GLU ILE ASN GLN ILE LEU SEQRES 23 A 457 LEU ARG GLU ALA GLN LYS GLY LYS ARG VAL VAL ARG LEU SEQRES 24 A 457 LYS GLY GLY ASP PRO PHE ILE PHE GLY ARG GLY GLY GLU SEQRES 25 A 457 GLU LEU GLU THR LEU CYS HIS ALA GLY ILE PRO PHE SER SEQRES 26 A 457 VAL VAL PRO GLY ILE THR ALA ALA SER GLY CYS SER ALA SEQRES 27 A 457 TYR SER GLY ILE PRO LEU THR HIS ARG ASP TYR ALA GLN SEQRES 28 A 457 SER VAL ARG LEU VAL THR GLY HIS LEU LYS THR GLY GLY SEQRES 29 A 457 GLU LEU ASP TRP GLU ASN LEU ALA ALA GLU LYS GLN THR SEQRES 30 A 457 LEU VAL PHE TYR MET GLY LEU ASN GLN ALA ALA THR ILE SEQRES 31 A 457 GLN GLU LYS LEU ILE ALA PHE GLY MET GLN ALA ASP MET SEQRES 32 A 457 PRO VAL ALA LEU VAL GLU ASN GLY THR SER VAL LYS GLN SEQRES 33 A 457 ARG VAL VAL HIS GLY VAL LEU THR GLN LEU GLY GLU LEU SEQRES 34 A 457 ALA GLN GLN VAL GLU SER PRO ALA LEU ILE ILE VAL GLY SEQRES 35 A 457 ARG VAL VAL ALA LEU ARG ASP LYS LEU ASN TRP PHE SER SEQRES 36 A 457 ASN HIS SEQRES 1 B 457 MET ASP HIS LEU PRO ILE PHE CYS GLN LEU ARG ASP ARG SEQRES 2 B 457 ASP CYS LEU ILE VAL GLY GLY GLY ASP VAL ALA GLU ARG SEQRES 3 B 457 LYS ALA ARG LEU LEU LEU GLU ALA GLY ALA ARG LEU THR SEQRES 4 B 457 VAL ASN ALA LEU THR PHE ILE PRO GLN PHE THR VAL TRP SEQRES 5 B 457 ALA ASN GLU GLY MET LEU THR LEU VAL GLU GLY PRO PHE SEQRES 6 B 457 ASP GLU THR LEU LEU ASP SER CYS TRP LEU ALA ILE ALA SEQRES 7 B 457 ALA THR ASP ASP ASP THR VAL ASN GLN ARG VAL SER ASP SEQRES 8 B 457 ALA ALA GLU SER ARG ARG ILE PHE CYS ASN VAL VAL ASP SEQRES 9 B 457 ALA PRO LYS ALA ALA SER PHE ILE MET PRO SER ILE ILE SEQRES 10 B 457 ASP ARG SER PRO LEU MET VAL ALA VAL SER SEP GLY GLY SEQRES 11 B 457 THR SER PRO VAL LEU ALA ARG LEU LEU ARG GLU LYS LEU SEQRES 12 B 457 GLU SER LEU LEU PRO GLN HIS LEU GLY GLN VAL ALA ARG SEQRES 13 B 457 TYR ALA GLY GLN LEU ARG ALA ARG VAL LYS LYS GLN PHE SEQRES 14 B 457 ALA THR MET GLY GLU ARG ARG ARG PHE TRP GLU LYS PHE SEQRES 15 B 457 PHE VAL ASN ASP ARG LEU ALA GLN SER LEU ALA ASN ALA SEQRES 16 B 457 ASP GLU LYS ALA VAL ASN ALA THR THR GLU ARG LEU PHE SEQRES 17 B 457 SER GLU PRO LEU ASP HIS ARG GLY GLU VAL VAL LEU VAL SEQRES 18 B 457 GLY ALA GLY PRO GLY ASP ALA GLY LEU LEU THR LEU LYS SEQRES 19 B 457 GLY LEU GLN GLN ILE GLN GLN ALA ASP ILE VAL VAL TYR SEQRES 20 B 457 ASP ARG LEU VAL SER ASP ASP ILE MET ASN LEU VAL ARG SEQRES 21 B 457 ARG ASP ALA ASP ARG VAL PHE VAL GLY LYS ARG ALA GLY SEQRES 22 B 457 TYR HIS CYS VAL PRO GLN GLU GLU ILE ASN GLN ILE LEU SEQRES 23 B 457 LEU ARG GLU ALA GLN LYS GLY LYS ARG VAL VAL ARG LEU SEQRES 24 B 457 LYS GLY GLY ASP PRO PHE ILE PHE GLY ARG GLY GLY GLU SEQRES 25 B 457 GLU LEU GLU THR LEU CYS HIS ALA GLY ILE PRO PHE SER SEQRES 26 B 457 VAL VAL PRO GLY ILE THR ALA ALA SER GLY CYS SER ALA SEQRES 27 B 457 TYR SER GLY ILE PRO LEU THR HIS ARG ASP TYR ALA GLN SEQRES 28 B 457 SER VAL ARG LEU VAL THR GLY HIS LEU LYS THR GLY GLY SEQRES 29 B 457 GLU LEU ASP TRP GLU ASN LEU ALA ALA GLU LYS GLN THR SEQRES 30 B 457 LEU VAL PHE TYR MET GLY LEU ASN GLN ALA ALA THR ILE SEQRES 31 B 457 GLN GLU LYS LEU ILE ALA PHE GLY MET GLN ALA ASP MET SEQRES 32 B 457 PRO VAL ALA LEU VAL GLU ASN GLY THR SER VAL LYS GLN SEQRES 33 B 457 ARG VAL VAL HIS GLY VAL LEU THR GLN LEU GLY GLU LEU SEQRES 34 B 457 ALA GLN GLN VAL GLU SER PRO ALA LEU ILE ILE VAL GLY SEQRES 35 B 457 ARG VAL VAL ALA LEU ARG ASP LYS LEU ASN TRP PHE SER SEQRES 36 B 457 ASN HIS MODRES 1PJS SEP A 128 SER PHOSPHOSERINE MODRES 1PJS SEP B 128 SER PHOSPHOSERINE HET SEP A 128 10 HET SEP B 128 10 HET SAH A 501 26 HET NAD A 502 44 HET PGE A 505 10 HET PGE A 506 10 HET PO4 B 507 5 HET SAH B 503 26 HET NAD B 504 44 HETNAM SEP PHOSPHOSERINE HETNAM SAH S-ADENOSYL-L-HOMOCYSTEINE HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM PGE TRIETHYLENE GLYCOL HETNAM PO4 PHOSPHATE ION HETSYN SEP PHOSPHONOSERINE FORMUL 1 SEP 2(C3 H8 N O6 P) FORMUL 3 SAH 2(C14 H20 N6 O5 S) FORMUL 4 NAD 2(C21 H27 N7 O14 P2) FORMUL 5 PGE 2(C6 H14 O4) FORMUL 7 PO4 O4 P 3- FORMUL 10 HOH *212(H2 O) HELIX 1 1 GLY A 21 ALA A 34 1 14 HELIX 2 2 ILE A 46 ASN A 54 1 9 HELIX 3 3 ASP A 66 ASP A 71 5 6 HELIX 4 4 ASP A 82 SER A 95 1 14 HELIX 5 5 SER A 132 LEU A 147 1 16 HELIX 6 6 HIS A 150 LYS A 167 1 18 HELIX 7 7 GLY A 173 PHE A 183 1 11 HELIX 8 8 ASN A 185 ASN A 194 1 10 HELIX 9 9 ASP A 196 SER A 209 1 14 HELIX 10 10 ASP A 227 LEU A 231 5 5 HELIX 11 11 THR A 232 GLN A 241 1 10 HELIX 12 12 SER A 252 ASN A 257 1 6 HELIX 13 13 PRO A 278 LYS A 292 1 15 HELIX 14 14 ARG A 309 GLU A 315 1 7 HELIX 15 15 THR A 316 GLY A 321 1 6 HELIX 16 16 THR A 331 SER A 340 1 10 HELIX 17 17 ASP A 367 ALA A 372 1 6 HELIX 18 18 GLN A 386 PHE A 397 1 12 HELIX 19 19 GLN A 425 ALA A 430 1 6 HELIX 20 20 ARG A 443 ALA A 446 5 4 HELIX 21 21 LEU A 447 ASN A 452 1 6 HELIX 22 22 GLY B 21 ALA B 34 1 14 HELIX 23 23 ILE B 46 ASN B 54 1 9 HELIX 24 24 ASP B 66 ASP B 71 5 6 HELIX 25 25 ASP B 82 ARG B 96 1 15 HELIX 26 26 SER B 132 LEU B 147 1 16 HELIX 27 27 HIS B 150 ALA B 158 1 9 HELIX 28 28 LEU B 161 PHE B 169 1 9 HELIX 29 29 THR B 171 PHE B 183 1 13 HELIX 30 30 ASN B 185 ALA B 195 1 11 HELIX 31 31 ASP B 196 GLU B 210 1 15 HELIX 32 32 ASP B 227 LEU B 231 5 5 HELIX 33 33 THR B 232 GLN B 240 1 9 HELIX 34 34 SER B 252 ASN B 257 1 6 HELIX 35 35 LYS B 270 TYR B 274 5 5 HELIX 36 36 PRO B 278 LYS B 292 1 15 HELIX 37 37 THR B 331 GLY B 341 1 11 HELIX 38 38 ASP B 367 ALA B 372 1 6 HELIX 39 39 GLY B 383 GLN B 386 5 4 HELIX 40 40 ALA B 387 ALA B 396 1 10 HELIX 41 41 GLN B 425 GLN B 431 1 7 HELIX 42 42 ARG B 443 ALA B 446 5 4 HELIX 43 43 LEU B 447 ASN B 452 1 6 SHEET 1 A 4 PHE A 111 ILE A 112 0 SHEET 2 A 4 LEU B 4 CYS B 8 -1 O PHE B 7 N ILE A 112 SHEET 3 A 4 LEU A 4 CYS A 8 -1 N LEU A 4 O CYS B 8 SHEET 4 A 4 PHE B 111 ILE B 112 -1 O ILE B 112 N PHE A 7 SHEET 1 B 5 THR A 59 GLU A 62 0 SHEET 2 B 5 ARG A 37 ALA A 42 1 N VAL A 40 O VAL A 61 SHEET 3 B 5 ASP A 14 VAL A 18 1 N ILE A 17 O THR A 39 SHEET 4 B 5 LEU A 75 ALA A 78 1 O LEU A 75 N LEU A 16 SHEET 5 B 5 PHE A 99 VAL A 102 1 O ASN A 101 N ALA A 78 SHEET 1 C 4 SER A 115 ARG A 119 0 SHEET 2 C 4 LEU A 122 SER A 127 -1 O VAL A 124 N ILE A 117 SHEET 3 C 4 LEU B 122 SER B 127 -1 O SER B 127 N MET A 123 SHEET 4 C 4 SER B 115 ARG B 119 -1 N ILE B 117 O VAL B 124 SHEET 1 D 5 ASP A 264 PHE A 267 0 SHEET 2 D 5 ILE A 244 TYR A 247 1 N VAL A 245 O ASP A 264 SHEET 3 D 5 ARG A 295 LYS A 300 1 O VAL A 297 N VAL A 246 SHEET 4 D 5 GLU A 217 GLY A 222 1 N GLU A 217 O VAL A 296 SHEET 5 D 5 PHE A 324 VAL A 327 1 O VAL A 327 N LEU A 220 SHEET 1 E10 ARG A 417 VAL A 422 0 SHEET 2 E10 PRO A 404 GLU A 409 -1 N GLU A 409 O ARG A 417 SHEET 3 E10 ALA A 437 VAL A 441 -1 O ILE A 440 N ALA A 406 SHEET 4 E10 GLN A 376 TYR A 381 -1 N LEU A 378 O VAL A 441 SHEET 5 E10 SER A 352 THR A 357 1 N VAL A 356 O VAL A 379 SHEET 6 E10 SER B 352 THR B 357 -1 O LEU B 355 N VAL A 353 SHEET 7 E10 THR B 377 TYR B 381 1 O TYR B 381 N VAL B 356 SHEET 8 E10 ALA B 437 VAL B 441 -1 O VAL B 441 N LEU B 378 SHEET 9 E10 PRO B 404 GLU B 409 -1 N ALA B 406 O ILE B 440 SHEET 10 E10 ARG B 417 VAL B 422 -1 O VAL B 419 N LEU B 407 SHEET 1 F 5 THR B 59 GLU B 62 0 SHEET 2 F 5 ARG B 37 ALA B 42 1 N VAL B 40 O THR B 59 SHEET 3 F 5 ASP B 14 VAL B 18 1 N ILE B 17 O ASN B 41 SHEET 4 F 5 LEU B 75 ALA B 78 1 O LEU B 75 N LEU B 16 SHEET 5 F 5 PHE B 99 VAL B 102 1 O ASN B 101 N ALA B 78 SHEET 1 G 5 ASP B 264 PHE B 267 0 SHEET 2 G 5 ILE B 244 TYR B 247 1 N VAL B 245 O ASP B 264 SHEET 3 G 5 ARG B 295 LYS B 300 1 O VAL B 297 N ILE B 244 SHEET 4 G 5 GLU B 217 GLY B 222 1 N VAL B 219 O ARG B 298 SHEET 5 G 5 PHE B 324 VAL B 327 1 O VAL B 327 N LEU B 220 LINK C SER A 127 N SEP A 128 1555 1555 1.41 LINK C SEP A 128 N GLY A 129 1555 1555 1.35 LINK C SER B 127 N SEP B 128 1555 1555 1.39 LINK C SEP B 128 N GLY B 129 1555 1555 1.36 CISPEP 1 SER A 120 PRO A 121 0 0.13 CISPEP 2 SER A 435 PRO A 436 0 -0.04 CISPEP 3 SER B 120 PRO B 121 0 0.46 CISPEP 4 SER B 435 PRO B 436 0 -0.06 SITE 1 AC1 8 ARG A 260 ARG A 261 HOH A 521 HOH A 524 SITE 2 AC1 8 SER B 115 ARG B 137 ARG B 140 HOH B 513 SITE 1 AC2 18 PRO A 225 LEU A 250 GLY A 301 GLY A 302 SITE 2 AC2 18 ASP A 303 ILE A 306 PHE A 307 THR A 331 SITE 3 AC2 18 ALA A 332 CYS A 336 TYR A 381 MET A 382 SITE 4 AC2 18 VAL A 408 ASN A 410 GLY A 411 PRO A 436 SITE 5 AC2 18 ALA A 437 HOH A 576 SITE 1 AC3 15 GLY A 19 GLY A 20 GLY A 21 ASP A 22 SITE 2 AC3 15 VAL A 23 ALA A 42 LEU A 43 THR A 44 SITE 3 AC3 15 GLY A 63 THR A 80 ASP A 81 VAL A 85 SITE 4 AC3 15 HOH A 591 HOH A 595 HOH A 604 SITE 1 AC4 19 PRO B 225 GLY B 301 GLY B 302 ASP B 303 SITE 2 AC4 19 ILE B 306 PHE B 307 THR B 331 ALA B 332 SITE 3 AC4 19 CYS B 336 TYR B 381 MET B 382 VAL B 408 SITE 4 AC4 19 ASN B 410 GLY B 411 PRO B 436 ALA B 437 SITE 5 AC4 19 LEU B 438 HOH B 526 HOH B 576 SITE 1 AC5 16 ASP A 264 GLY B 20 GLY B 21 ASP B 22 SITE 2 AC5 16 VAL B 23 ARG B 26 LEU B 43 THR B 44 SITE 3 AC5 16 THR B 80 ASP B 81 VAL B 85 ASP B 104 SITE 4 AC5 16 GLU B 281 ARG B 288 LYS B 292 HOH B 558 SITE 1 AC6 6 LEU A 139 LYS A 142 HOH A 513 HOH A 577 SITE 2 AC6 6 GLN B 241 HOH B 616 SITE 1 AC7 3 LEU A 146 LEU A 151 LEU B 139 CRYST1 60.124 120.686 130.178 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016632 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008286 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007682 0.00000