HEADER OXIDOREDUCTASE 06-JUN-03 1PL3 TITLE CYTOCHROME DOMAIN OF CELLOBIOSE DEHYDROGENASE, M65H MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELLOBIOSE DEHYDROGENASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CYTOCHROME TYPE B HEME DOMAIN; COMPND 5 SYNONYM: CDH, CELLOBIOSE-QUINONE OXIDOREDUCTASE; COMPND 6 EC: 1.1.99.18; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PHANEROCHAETE CHRYSOSPORIUM; SOURCE 3 ORGANISM_TAXID: 5306; SOURCE 4 GENE: CDH-1 AND CDH-2; SOURCE 5 EXPRESSION_SYSTEM: PHANEROCHAETE CHRYSOSPORIUM; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 5306; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: OGC316-7; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PUGC1 KEYWDS B-TYPE CYTOCHROME, MUTANT, BIS-HIS LIGATION, BETA SANDWICH, FE(II)- KEYWDS 2 PROTOPORPHYRIN IX, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR F.A.J.ROTSAERT,B.M.HALLBERG,S.DE VRIES,P.MOENNE-LOCCOZ,C.DIVNE, AUTHOR 2 M.H.GOLD REVDAT 9 16-AUG-23 1PL3 1 REMARK REVDAT 8 27-OCT-21 1PL3 1 SEQADV HETSYN REVDAT 7 29-JUL-20 1PL3 1 COMPND REMARK HETNAM LINK REVDAT 7 2 1 SITE ATOM REVDAT 6 25-DEC-19 1PL3 1 SEQADV SEQRES REVDAT 5 24-JUL-19 1PL3 1 REMARK LINK REVDAT 4 13-JUL-11 1PL3 1 VERSN REVDAT 3 24-FEB-09 1PL3 1 VERSN REVDAT 2 02-SEP-03 1PL3 1 JRNL REVDAT 1 01-JUL-03 1PL3 0 JRNL AUTH F.A.J.ROTSAERT,B.M.HALLBERG,S.DE VRIES,P.MOENNE-LOCCOZ, JRNL AUTH 2 C.DIVNE,V.RENGANATHAN,M.H.GOLD JRNL TITL BIOPHYSICAL AND STRUCTURAL ANALYSIS OF A NOVEL HEME B IRON JRNL TITL 2 LIGATION IN THE FLAVOCYTOCHROME CELLOBIOSE DEHYDROGENASE. JRNL REF J.BIOL.CHEM. V. 278 33224 2003 JRNL REFN ISSN 0021-9258 JRNL PMID 12796496 JRNL DOI 10.1074/JBC.M302653200 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 43870 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1852 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.4190 REMARK 3 BIN FREE R VALUE SET COUNT : 3120 REMARK 3 BIN FREE R VALUE : 0.4330 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2840 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 165 REMARK 3 SOLVENT ATOMS : 336 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : NULL REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; 0.019 ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; 1.730 ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : NULL REMARK 3 ION PROBE RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1PL3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JUN-03. REMARK 100 THE DEPOSITION ID IS D_1000019404. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-MAY-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45580 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 48.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 5.600 REMARK 200 R MERGE (I) : 0.11300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.5 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.57500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: 1D7C REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, 2-METHYL 2,4-PENTANEDIOL, REMARK 280 HEPES, CADMIUM CHLORIDE, PH 7.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 35.11200 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 17.55600 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 26.33400 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 8.77800 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 43.89000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 134 CB - CG - OD1 ANGL. DEV. = 5.4 DEGREES REMARK 500 ASP B 151 CB - CG - OD2 ANGL. DEV. = 7.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 90 32.43 78.48 REMARK 500 GLN A 92 114.92 -36.05 REMARK 500 ASN A 111 -166.46 -121.06 REMARK 500 SER A 137 -166.08 -128.98 REMARK 500 GLN B 92 116.74 -37.01 REMARK 500 ASN B 111 -165.56 -126.23 REMARK 500 SER B 137 -158.81 -131.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 502 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PRO A 21 O REMARK 620 2 ASP A 24 OD1 89.8 REMARK 620 3 ASP A 24 OD2 88.5 54.0 REMARK 620 4 HOH A 629 O 97.1 81.4 135.1 REMARK 620 5 HEM B 401 O1A 84.3 139.6 85.8 139.0 REMARK 620 6 HEM B 401 O2A 91.9 164.3 141.7 82.8 56.1 REMARK 620 7 HOH B 628 O 175.8 89.8 87.9 87.0 93.3 89.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 401 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 65 ND1 REMARK 620 2 HEM A 401 NA 90.3 REMARK 620 3 HEM A 401 NB 87.2 90.5 REMARK 620 4 HEM A 401 NC 89.4 179.1 88.7 REMARK 620 5 HEM A 401 ND 94.2 90.8 178.1 90.0 REMARK 620 6 HIS A 163 NE2 178.3 88.1 92.3 92.2 86.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 503 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 107 OE2 REMARK 620 2 ASN A 186 OXT 161.3 REMARK 620 3 HOH A 721 O 86.2 110.2 REMARK 620 4 HOH A 779 O 97.4 64.4 164.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 504 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 126 OE2 REMARK 620 2 GLU A 126 OE1 45.8 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 501 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 165 OD1 REMARK 620 2 ASP A 165 OD2 53.2 REMARK 620 3 HOH A 627 O 79.1 101.8 REMARK 620 4 ASP B 165 OD1 119.7 82.9 157.5 REMARK 620 5 ASP B 165 OD2 87.6 92.8 148.0 51.8 REMARK 620 6 HOH B1627 O 155.5 143.4 79.0 84.2 105.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD B1502 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HEM A 401 O1A REMARK 620 2 HEM A 401 O2A 54.5 REMARK 620 3 HOH A1628 O 88.7 88.7 REMARK 620 4 PRO B 21 O 85.8 91.7 173.0 REMARK 620 5 ASP B 24 OD1 140.4 164.9 89.4 92.0 REMARK 620 6 ASP B 24 OD2 85.6 139.7 84.0 91.2 54.8 REMARK 620 7 HOH B1629 O 138.0 83.5 90.5 96.5 81.6 135.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 401 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 65 ND1 REMARK 620 2 HEM B 401 NA 92.1 REMARK 620 3 HEM B 401 NB 87.7 90.9 REMARK 620 4 HEM B 401 NC 88.5 179.1 89.8 REMARK 620 5 HEM B 401 ND 95.4 89.9 176.8 89.3 REMARK 620 6 HIS B 163 NE2 173.2 91.7 86.6 87.7 90.3 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1D7B RELATED DB: PDB REMARK 900 CYTOCHROME DOMAIN OF CELLOBIOSE DEHYDROGENASE, PH 7.5 REMARK 900 RELATED ID: 1D7C RELATED DB: PDB REMARK 900 CYTOCHROME DOMAIN OF CELLOBIOSE DEHYDROGENASE, PH 4.6 REMARK 900 RELATED ID: 1D7D RELATED DB: PDB REMARK 900 CYTOCHROME DOMAIN OF CELLOBIOSE DEHYDROGENASE, HP3 FRAGMENT, PH 7.5 REMARK 900 RELATED ID: 1KDG RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE FLAVIN DOMAIN OF CELLOBIOSE DEHYDROGENASE REMARK 900 RELATED ID: 1NAA RELATED DB: PDB REMARK 900 TITLE CELLOBIOSE DEHYDROGENASE FLAVOPROTEIN FRAGMENT IN COMPLEX REMARK 900 WITH CELLOBIONOLACTAM DBREF 1PL3 A 1 186 UNP Q01738 CDH_PHACH 19 204 DBREF 1PL3 B 1 186 UNP Q01738 CDH_PHACH 19 204 SEQADV 1PL3 HIS A 65 UNP Q01738 MET 83 ENGINEERED MUTATION SEQADV 1PL3 HIS B 65 UNP Q01738 MET 83 ENGINEERED MUTATION SEQRES 1 A 186 PCA SER ALA SER GLN PHE THR ASP PRO THR THR GLY PHE SEQRES 2 A 186 GLN PHE THR GLY ILE THR ASP PRO VAL HIS ASP VAL THR SEQRES 3 A 186 TYR GLY PHE VAL PHE PRO PRO LEU ALA THR SER GLY ALA SEQRES 4 A 186 GLN SER THR GLU PHE ILE GLY GLU VAL VAL ALA PRO ILE SEQRES 5 A 186 ALA SER LYS TRP ILE GLY ILE ALA LEU GLY GLY ALA HIS SEQRES 6 A 186 ASN ASN ASP LEU LEU LEU VAL ALA TRP ALA ASN GLY ASN SEQRES 7 A 186 GLN ILE VAL SER SER THR ARG TRP ALA THR GLY TYR VAL SEQRES 8 A 186 GLN PRO THR ALA TYR THR GLY THR ALA THR LEU THR THR SEQRES 9 A 186 LEU PRO GLU THR THR ILE ASN SER THR HIS TRP LYS TRP SEQRES 10 A 186 VAL PHE ARG CYS GLN GLY CYS THR GLU TRP ASN ASN GLY SEQRES 11 A 186 GLY GLY ILE ASP VAL THR SER GLN GLY VAL LEU ALA TRP SEQRES 12 A 186 ALA PHE SER ASN VAL ALA VAL ASP ASP PRO SER ASP PRO SEQRES 13 A 186 GLN SER THR PHE SER GLU HIS THR ASP PHE GLY PHE PHE SEQRES 14 A 186 GLY ILE ASP TYR SER THR ALA HIS SER ALA ASN TYR GLN SEQRES 15 A 186 ASN TYR LEU ASN SEQRES 1 B 186 PCA SER ALA SER GLN PHE THR ASP PRO THR THR GLY PHE SEQRES 2 B 186 GLN PHE THR GLY ILE THR ASP PRO VAL HIS ASP VAL THR SEQRES 3 B 186 TYR GLY PHE VAL PHE PRO PRO LEU ALA THR SER GLY ALA SEQRES 4 B 186 GLN SER THR GLU PHE ILE GLY GLU VAL VAL ALA PRO ILE SEQRES 5 B 186 ALA SER LYS TRP ILE GLY ILE ALA LEU GLY GLY ALA HIS SEQRES 6 B 186 ASN ASN ASP LEU LEU LEU VAL ALA TRP ALA ASN GLY ASN SEQRES 7 B 186 GLN ILE VAL SER SER THR ARG TRP ALA THR GLY TYR VAL SEQRES 8 B 186 GLN PRO THR ALA TYR THR GLY THR ALA THR LEU THR THR SEQRES 9 B 186 LEU PRO GLU THR THR ILE ASN SER THR HIS TRP LYS TRP SEQRES 10 B 186 VAL PHE ARG CYS GLN GLY CYS THR GLU TRP ASN ASN GLY SEQRES 11 B 186 GLY GLY ILE ASP VAL THR SER GLN GLY VAL LEU ALA TRP SEQRES 12 B 186 ALA PHE SER ASN VAL ALA VAL ASP ASP PRO SER ASP PRO SEQRES 13 B 186 GLN SER THR PHE SER GLU HIS THR ASP PHE GLY PHE PHE SEQRES 14 B 186 GLY ILE ASP TYR SER THR ALA HIS SER ALA ASN TYR GLN SEQRES 15 B 186 ASN TYR LEU ASN MODRES 1PL3 ASN A 111 ASN GLYCOSYLATION SITE MODRES 1PL3 ASN B 111 ASN GLYCOSYLATION SITE MODRES 1PL3 PCA A 1 GLN PYROGLUTAMIC ACID MODRES 1PL3 PCA B 1 GLN PYROGLUTAMIC ACID HET PCA A 1 8 HET PCA B 1 8 HET NAG C 1 14 HET NAG C 2 14 HET NAG D 1 14 HET NAG D 2 14 HET CD A 502 1 HET CD A 503 1 HET CD A 504 1 HET CD A 501 1 HET HEM A 401 43 HET 1PG A 402 17 HET CD B1502 1 HET CD B1503 1 HET HEM B 401 43 HETNAM PCA PYROGLUTAMIC ACID HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CD CADMIUM ION HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM 1PG 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)- HETNAM 2 1PG ETHANOL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN HEM HEME FORMUL 1 PCA 2(C5 H7 N O3) FORMUL 3 NAG 4(C8 H15 N O6) FORMUL 5 CD 6(CD 2+) FORMUL 9 HEM 2(C34 H32 FE N4 O4) FORMUL 10 1PG C11 H24 O6 FORMUL 14 HOH *336(H2 O) HELIX 1 1 SER A 174 ALA A 176 5 3 HELIX 2 2 ASN A 180 ASN A 186 1 7 HELIX 3 3 SER B 174 ALA B 176 5 3 HELIX 4 4 ASN B 180 ASN B 186 1 7 SHEET 1 A 6 SER A 4 THR A 7 0 SHEET 2 A 6 GLN A 14 ASP A 20 -1 O PHE A 15 N PHE A 6 SHEET 3 A 6 VAL A 25 VAL A 30 -1 O TYR A 27 N ILE A 18 SHEET 4 A 6 PHE A 44 PRO A 51 -1 O ILE A 45 N VAL A 30 SHEET 5 A 6 HIS A 114 GLN A 122 -1 O CYS A 121 N PHE A 44 SHEET 6 A 6 THR A 101 THR A 104 -1 N THR A 101 O GLN A 122 SHEET 1 B 6 SER A 4 THR A 7 0 SHEET 2 B 6 GLN A 14 ASP A 20 -1 O PHE A 15 N PHE A 6 SHEET 3 B 6 VAL A 25 VAL A 30 -1 O TYR A 27 N ILE A 18 SHEET 4 B 6 PHE A 44 PRO A 51 -1 O ILE A 45 N VAL A 30 SHEET 5 B 6 HIS A 114 GLN A 122 -1 O CYS A 121 N PHE A 44 SHEET 6 B 6 THR A 109 ILE A 110 -1 N THR A 109 O LYS A 116 SHEET 1 C 6 THR A 94 ALA A 95 0 SHEET 2 C 6 GLN A 79 TRP A 86 -1 N TRP A 86 O THR A 94 SHEET 3 C 6 LEU A 70 ASN A 76 -1 N TRP A 74 O VAL A 81 SHEET 4 C 6 TRP A 56 ALA A 60 -1 N ILE A 59 O LEU A 71 SHEET 5 C 6 GLN A 138 SER A 146 -1 O ALA A 142 N ALA A 60 SHEET 6 C 6 ASP A 165 ASP A 172 -1 O PHE A 169 N LEU A 141 SHEET 1 D 6 SER B 4 THR B 7 0 SHEET 2 D 6 GLN B 14 ASP B 20 -1 O PHE B 15 N PHE B 6 SHEET 3 D 6 VAL B 25 VAL B 30 -1 O TYR B 27 N ILE B 18 SHEET 4 D 6 PHE B 44 PRO B 51 -1 O ILE B 45 N VAL B 30 SHEET 5 D 6 HIS B 114 GLN B 122 -1 O TRP B 115 N ALA B 50 SHEET 6 D 6 THR B 101 THR B 104 -1 N THR B 103 O ARG B 120 SHEET 1 E 6 SER B 4 THR B 7 0 SHEET 2 E 6 GLN B 14 ASP B 20 -1 O PHE B 15 N PHE B 6 SHEET 3 E 6 VAL B 25 VAL B 30 -1 O TYR B 27 N ILE B 18 SHEET 4 E 6 PHE B 44 PRO B 51 -1 O ILE B 45 N VAL B 30 SHEET 5 E 6 HIS B 114 GLN B 122 -1 O TRP B 115 N ALA B 50 SHEET 6 E 6 THR B 109 ILE B 110 -1 N THR B 109 O LYS B 116 SHEET 1 F 6 THR B 94 ALA B 95 0 SHEET 2 F 6 GLN B 79 TRP B 86 -1 N TRP B 86 O THR B 94 SHEET 3 F 6 LEU B 70 ASN B 76 -1 N LEU B 70 O ARG B 85 SHEET 4 F 6 TRP B 56 ALA B 60 -1 N ILE B 59 O LEU B 71 SHEET 5 F 6 GLN B 138 SER B 146 -1 O ALA B 144 N GLY B 58 SHEET 6 F 6 ASP B 165 ASP B 172 -1 O ILE B 171 N GLY B 139 SSBOND 1 CYS A 121 CYS A 124 1555 1555 2.02 SSBOND 2 CYS B 121 CYS B 124 1555 1555 1.99 LINK C PCA A 1 N SER A 2 1555 1555 1.32 LINK ND2 ASN A 111 C1 NAG C 1 1555 1555 1.48 LINK C PCA B 1 N SER B 2 1555 1555 1.32 LINK ND2 ASN B 111 C1 NAG D 1 1555 1555 1.45 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.47 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.45 LINK O PRO A 21 CD CD A 502 1555 1555 2.33 LINK OD1 ASP A 24 CD CD A 502 1555 1555 2.35 LINK OD2 ASP A 24 CD CD A 502 1555 1555 2.47 LINK ND1 HIS A 65 FE HEM A 401 1555 1555 2.15 LINK OE2 GLU A 107 CD CD A 503 1555 1555 2.43 LINK OE2 GLU A 126 CD CD A 504 1555 1555 2.95 LINK OE1 GLU A 126 CD CD A 504 1555 1555 2.86 LINK NE2 HIS A 163 FE HEM A 401 1555 1555 2.08 LINK OD1 ASP A 165 CD CD A 501 1555 1555 2.53 LINK OD2 ASP A 165 CD CD A 501 1555 1555 2.41 LINK OXT ASN A 186 CD CD A 503 1555 1555 2.84 LINK O1A HEM A 401 CD CD B1502 1555 1555 2.23 LINK O2A HEM A 401 CD CD B1502 1555 1555 2.56 LINK CD CD A 501 O HOH A 627 1555 1555 2.39 LINK CD CD A 501 OD1 ASP B 165 1555 1555 2.53 LINK CD CD A 501 OD2 ASP B 165 1555 1555 2.39 LINK CD CD A 501 O HOH B1627 1555 1555 2.48 LINK CD CD A 502 O HOH A 629 1555 1555 2.07 LINK CD CD A 502 O1A HEM B 401 1555 1555 2.20 LINK CD CD A 502 O2A HEM B 401 1555 1555 2.47 LINK CD CD A 502 O HOH B 628 1555 1555 2.25 LINK CD CD A 503 O HOH A 721 1555 1555 2.58 LINK CD CD A 503 O HOH A 779 1555 1555 2.60 LINK O HOH A1628 CD CD B1502 1555 1555 2.31 LINK O PRO B 21 CD CD B1502 1555 1555 2.38 LINK OD1 ASP B 24 CD CD B1502 1555 1555 2.34 LINK OD2 ASP B 24 CD CD B1502 1555 1555 2.45 LINK ND1 HIS B 65 FE HEM B 401 1555 1555 2.14 LINK OE2 GLU B 107 CD CD B1503 1555 1555 3.02 LINK NE2 HIS B 163 FE HEM B 401 1555 1555 2.11 LINK CD CD B1502 O HOH B1629 1555 1555 1.97 CRYST1 139.033 139.033 52.668 90.00 90.00 120.00 P 65 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007193 0.004153 0.000000 0.00000 SCALE2 0.000000 0.008305 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018987 0.00000 HETATM 1 N PCA A 1 37.452 47.698 25.034 1.00 26.31 N HETATM 2 CA PCA A 1 38.106 49.019 25.301 1.00 26.24 C HETATM 3 CB PCA A 1 38.758 48.897 26.671 1.00 26.58 C HETATM 4 CG PCA A 1 38.089 47.751 27.394 1.00 25.91 C HETATM 5 CD PCA A 1 37.495 46.958 26.293 1.00 25.89 C HETATM 6 OE PCA A 1 37.044 45.815 26.465 1.00 26.65 O HETATM 7 C PCA A 1 39.136 49.256 24.163 1.00 27.33 C HETATM 8 O PCA A 1 39.486 48.333 23.393 1.00 25.92 O