data_1PM1 # _entry.id 1PM1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1PM1 pdb_00001pm1 10.2210/pdb1pm1/pdb RCSB RCSB019416 ? ? WWPDB D_1000019416 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-06-22 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-10-27 5 'Structure model' 1 4 2023-08-16 6 'Structure model' 1 5 2024-10-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Refinement description' 7 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' struct_conn 3 4 'Structure model' struct_ref_seq_dif 4 4 'Structure model' struct_site 5 5 'Structure model' chem_comp_atom 6 5 'Structure model' chem_comp_bond 7 5 'Structure model' pdbx_initial_refinement_model 8 6 'Structure model' pdbx_entry_details 9 6 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 4 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 5 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 6 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 7 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 8 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 9 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 10 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 11 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 12 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 13 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 14 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 15 4 'Structure model' '_struct_ref_seq_dif.details' 16 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 17 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 18 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1PM1 _pdbx_database_status.recvd_initial_deposition_date 2003-06-09 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1PEE 'The imidazole complex of the wild-type protein' unspecified PDB 1EUO 'The ammonia complex of the wild-type protein' unspecified PDB 1IKJ 'The imidazole complex of a closely related protein' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Weichsel, A.' 1 'Montfort, W.R.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Conformational change and heme ruffling in nitrophorin 2, a nitric oxide carrier from kissing bug' 'To be Published' ? ? ? ? ? ? ? 0353 ? ? ? 1 'The crystal structure of nitrophorin 2. A trifunctional antihemostatic protein from the saliva of Rhodnius prolixus.' J.Biol.Chem. 275 30496 30503 2000 JBCHA3 US 0021-9258 0071 ? ? 10.1074/jbc.M002857200 2 'Ligand-induced heme ruffling and bent NO geometry in ultra-high-resolution structures of nitrophorin 4' Biochemistry 40 11327 11337 2001 BICHAW US 0006-2960 0033 ? ? 10.1021/bi0109257 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Weichsel, A.' 1 ? primary 'Montfort, W.R.' 2 ? 1 'Andersen, J.F.' 3 ? 1 'Montfort, W.R.' 4 ? 2 'Roberts, S.A.' 5 ? 2 'Weichsel, A.' 6 ? 2 'Qui, Y.' 7 ? 2 'Shelnutt, J.A.' 8 ? 2 'Walker, F.A.' 9 ? 2 'Montfort, W.R.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Nitrophorin 2' 20052.336 1 ? 'L122V, L132V' ? ? 2 non-polymer syn 'PROTOPORPHYRIN IX CONTAINING FE' 616.487 1 ? ? ? ? 3 non-polymer syn IMIDAZOLE 69.085 1 ? ? ? ? 4 water nat water 18.015 243 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'NP2, Prolixin-S' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MDCSTNISPKQGLDKAKYFSGKWYVTHFLDKDPQVTDQYCSSFTPRESDGTVKEALYHYNANKKTSFYNIGEGKLESSGL QYTAKYKTVDKKKAVLKEADEKNSYTLTVLEADDSSALVHICVREGSKDLGDVYTVLTHQKDAEPSAKVKSAVTQAGLQL SQFVGTKDLGCQYDDQFTSL ; _entity_poly.pdbx_seq_one_letter_code_can ;MDCSTNISPKQGLDKAKYFSGKWYVTHFLDKDPQVTDQYCSSFTPRESDGTVKEALYHYNANKKTSFYNIGEGKLESSGL QYTAKYKTVDKKKAVLKEADEKNSYTLTVLEADDSSALVHICVREGSKDLGDVYTVLTHQKDAEPSAKVKSAVTQAGLQL SQFVGTKDLGCQYDDQFTSL ; _entity_poly.pdbx_strand_id X _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PROTOPORPHYRIN IX CONTAINING FE' HEM 3 IMIDAZOLE IMD 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASP n 1 3 CYS n 1 4 SER n 1 5 THR n 1 6 ASN n 1 7 ILE n 1 8 SER n 1 9 PRO n 1 10 LYS n 1 11 GLN n 1 12 GLY n 1 13 LEU n 1 14 ASP n 1 15 LYS n 1 16 ALA n 1 17 LYS n 1 18 TYR n 1 19 PHE n 1 20 SER n 1 21 GLY n 1 22 LYS n 1 23 TRP n 1 24 TYR n 1 25 VAL n 1 26 THR n 1 27 HIS n 1 28 PHE n 1 29 LEU n 1 30 ASP n 1 31 LYS n 1 32 ASP n 1 33 PRO n 1 34 GLN n 1 35 VAL n 1 36 THR n 1 37 ASP n 1 38 GLN n 1 39 TYR n 1 40 CYS n 1 41 SER n 1 42 SER n 1 43 PHE n 1 44 THR n 1 45 PRO n 1 46 ARG n 1 47 GLU n 1 48 SER n 1 49 ASP n 1 50 GLY n 1 51 THR n 1 52 VAL n 1 53 LYS n 1 54 GLU n 1 55 ALA n 1 56 LEU n 1 57 TYR n 1 58 HIS n 1 59 TYR n 1 60 ASN n 1 61 ALA n 1 62 ASN n 1 63 LYS n 1 64 LYS n 1 65 THR n 1 66 SER n 1 67 PHE n 1 68 TYR n 1 69 ASN n 1 70 ILE n 1 71 GLY n 1 72 GLU n 1 73 GLY n 1 74 LYS n 1 75 LEU n 1 76 GLU n 1 77 SER n 1 78 SER n 1 79 GLY n 1 80 LEU n 1 81 GLN n 1 82 TYR n 1 83 THR n 1 84 ALA n 1 85 LYS n 1 86 TYR n 1 87 LYS n 1 88 THR n 1 89 VAL n 1 90 ASP n 1 91 LYS n 1 92 LYS n 1 93 LYS n 1 94 ALA n 1 95 VAL n 1 96 LEU n 1 97 LYS n 1 98 GLU n 1 99 ALA n 1 100 ASP n 1 101 GLU n 1 102 LYS n 1 103 ASN n 1 104 SER n 1 105 TYR n 1 106 THR n 1 107 LEU n 1 108 THR n 1 109 VAL n 1 110 LEU n 1 111 GLU n 1 112 ALA n 1 113 ASP n 1 114 ASP n 1 115 SER n 1 116 SER n 1 117 ALA n 1 118 LEU n 1 119 VAL n 1 120 HIS n 1 121 ILE n 1 122 CYS n 1 123 VAL n 1 124 ARG n 1 125 GLU n 1 126 GLY n 1 127 SER n 1 128 LYS n 1 129 ASP n 1 130 LEU n 1 131 GLY n 1 132 ASP n 1 133 VAL n 1 134 TYR n 1 135 THR n 1 136 VAL n 1 137 LEU n 1 138 THR n 1 139 HIS n 1 140 GLN n 1 141 LYS n 1 142 ASP n 1 143 ALA n 1 144 GLU n 1 145 PRO n 1 146 SER n 1 147 ALA n 1 148 LYS n 1 149 VAL n 1 150 LYS n 1 151 SER n 1 152 ALA n 1 153 VAL n 1 154 THR n 1 155 GLN n 1 156 ALA n 1 157 GLY n 1 158 LEU n 1 159 GLN n 1 160 LEU n 1 161 SER n 1 162 GLN n 1 163 PHE n 1 164 VAL n 1 165 GLY n 1 166 THR n 1 167 LYS n 1 168 ASP n 1 169 LEU n 1 170 GLY n 1 171 CYS n 1 172 GLN n 1 173 TYR n 1 174 ASP n 1 175 ASP n 1 176 GLN n 1 177 PHE n 1 178 THR n 1 179 SER n 1 180 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Rhodnius _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Rhodnius prolixus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 13249 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21DE3 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET17B _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HEM non-polymer . 'PROTOPORPHYRIN IX CONTAINING FE' HEME 'C34 H32 Fe N4 O4' 616.487 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IMD non-polymer . IMIDAZOLE ? 'C3 H5 N2 1' 69.085 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 0 0 MET MET X . n A 1 2 ASP 2 1 1 ASP ASP X . n A 1 3 CYS 3 2 2 CYS CYS X . n A 1 4 SER 4 3 3 SER SER X . n A 1 5 THR 5 4 4 THR THR X . n A 1 6 ASN 6 5 5 ASN ASN X . n A 1 7 ILE 7 6 6 ILE ILE X . n A 1 8 SER 8 7 7 SER SER X . n A 1 9 PRO 9 8 8 PRO PRO X . n A 1 10 LYS 10 9 9 LYS LYS X . n A 1 11 GLN 11 10 10 GLN GLN X . n A 1 12 GLY 12 11 11 GLY GLY X . n A 1 13 LEU 13 12 12 LEU LEU X . n A 1 14 ASP 14 13 13 ASP ASP X . n A 1 15 LYS 15 14 14 LYS LYS X . n A 1 16 ALA 16 15 15 ALA ALA X . n A 1 17 LYS 17 16 16 LYS LYS X . n A 1 18 TYR 18 17 17 TYR TYR X . n A 1 19 PHE 19 18 18 PHE PHE X . n A 1 20 SER 20 19 19 SER SER X . n A 1 21 GLY 21 20 20 GLY GLY X . n A 1 22 LYS 22 21 21 LYS LYS X . n A 1 23 TRP 23 22 22 TRP TRP X . n A 1 24 TYR 24 23 23 TYR TYR X . n A 1 25 VAL 25 24 24 VAL VAL X . n A 1 26 THR 26 25 25 THR THR X . n A 1 27 HIS 27 26 26 HIS HIS X . n A 1 28 PHE 28 27 27 PHE PHE X . n A 1 29 LEU 29 28 28 LEU LEU X . n A 1 30 ASP 30 29 29 ASP ASP X . n A 1 31 LYS 31 30 30 LYS LYS X . n A 1 32 ASP 32 31 31 ASP ASP X . n A 1 33 PRO 33 32 32 PRO PRO X . n A 1 34 GLN 34 33 33 GLN GLN X . n A 1 35 VAL 35 34 34 VAL VAL X . n A 1 36 THR 36 35 35 THR THR X . n A 1 37 ASP 37 36 36 ASP ASP X . n A 1 38 GLN 38 37 37 GLN GLN X . n A 1 39 TYR 39 38 38 TYR TYR X . n A 1 40 CYS 40 39 39 CYS CYS X . n A 1 41 SER 41 40 40 SER SER X . n A 1 42 SER 42 41 41 SER SER X . n A 1 43 PHE 43 42 42 PHE PHE X . n A 1 44 THR 44 43 43 THR THR X . n A 1 45 PRO 45 44 44 PRO PRO X . n A 1 46 ARG 46 45 45 ARG ARG X . n A 1 47 GLU 47 46 46 GLU GLU X . n A 1 48 SER 48 47 47 SER SER X . n A 1 49 ASP 49 48 48 ASP ASP X . n A 1 50 GLY 50 49 49 GLY GLY X . n A 1 51 THR 51 50 50 THR THR X . n A 1 52 VAL 52 51 51 VAL VAL X . n A 1 53 LYS 53 52 52 LYS LYS X . n A 1 54 GLU 54 53 53 GLU GLU X . n A 1 55 ALA 55 54 54 ALA ALA X . n A 1 56 LEU 56 55 55 LEU LEU X . n A 1 57 TYR 57 56 56 TYR TYR X . n A 1 58 HIS 58 57 57 HIS HIS X . n A 1 59 TYR 59 58 58 TYR TYR X . n A 1 60 ASN 60 59 59 ASN ASN X . n A 1 61 ALA 61 60 60 ALA ALA X . n A 1 62 ASN 62 61 61 ASN ASN X . n A 1 63 LYS 63 62 62 LYS LYS X . n A 1 64 LYS 64 63 63 LYS LYS X . n A 1 65 THR 65 64 64 THR THR X . n A 1 66 SER 66 65 65 SER SER X . n A 1 67 PHE 67 66 66 PHE PHE X . n A 1 68 TYR 68 67 67 TYR TYR X . n A 1 69 ASN 69 68 68 ASN ASN X . n A 1 70 ILE 70 69 69 ILE ILE X . n A 1 71 GLY 71 70 70 GLY GLY X . n A 1 72 GLU 72 71 71 GLU GLU X . n A 1 73 GLY 73 72 72 GLY GLY X . n A 1 74 LYS 74 73 73 LYS LYS X . n A 1 75 LEU 75 74 74 LEU LEU X . n A 1 76 GLU 76 75 75 GLU GLU X . n A 1 77 SER 77 76 76 SER SER X . n A 1 78 SER 78 77 77 SER SER X . n A 1 79 GLY 79 78 78 GLY GLY X . n A 1 80 LEU 80 79 79 LEU LEU X . n A 1 81 GLN 81 80 80 GLN GLN X . n A 1 82 TYR 82 81 81 TYR TYR X . n A 1 83 THR 83 82 82 THR THR X . n A 1 84 ALA 84 83 83 ALA ALA X . n A 1 85 LYS 85 84 84 LYS LYS X . n A 1 86 TYR 86 85 85 TYR TYR X . n A 1 87 LYS 87 86 86 LYS LYS X . n A 1 88 THR 88 87 87 THR THR X . n A 1 89 VAL 89 88 88 VAL VAL X . n A 1 90 ASP 90 89 89 ASP ASP X . n A 1 91 LYS 91 90 90 LYS LYS X . n A 1 92 LYS 92 91 91 LYS LYS X . n A 1 93 LYS 93 92 92 LYS LYS X . n A 1 94 ALA 94 93 93 ALA ALA X . n A 1 95 VAL 95 94 94 VAL VAL X . n A 1 96 LEU 96 95 95 LEU LEU X . n A 1 97 LYS 97 96 96 LYS LYS X . n A 1 98 GLU 98 97 97 GLU GLU X . n A 1 99 ALA 99 98 98 ALA ALA X . n A 1 100 ASP 100 99 99 ASP ASP X . n A 1 101 GLU 101 100 100 GLU GLU X . n A 1 102 LYS 102 101 101 LYS LYS X . n A 1 103 ASN 103 102 102 ASN ASN X . n A 1 104 SER 104 103 103 SER SER X . n A 1 105 TYR 105 104 104 TYR TYR X . n A 1 106 THR 106 105 105 THR THR X . n A 1 107 LEU 107 106 106 LEU LEU X . n A 1 108 THR 108 107 107 THR THR X . n A 1 109 VAL 109 108 108 VAL VAL X . n A 1 110 LEU 110 109 109 LEU LEU X . n A 1 111 GLU 111 110 110 GLU GLU X . n A 1 112 ALA 112 111 111 ALA ALA X . n A 1 113 ASP 113 112 112 ASP ASP X . n A 1 114 ASP 114 113 113 ASP ASP X . n A 1 115 SER 115 114 114 SER SER X . n A 1 116 SER 116 115 115 SER SER X . n A 1 117 ALA 117 116 116 ALA ALA X . n A 1 118 LEU 118 117 117 LEU LEU X . n A 1 119 VAL 119 118 118 VAL VAL X . n A 1 120 HIS 120 119 119 HIS HIS X . n A 1 121 ILE 121 120 120 ILE ILE X . n A 1 122 CYS 122 121 121 CYS CYS X . n A 1 123 VAL 123 122 122 VAL VAL X . n A 1 124 ARG 124 123 123 ARG ARG X . n A 1 125 GLU 125 124 124 GLU GLU X . n A 1 126 GLY 126 125 125 GLY GLY X . n A 1 127 SER 127 126 126 SER SER X . n A 1 128 LYS 128 127 127 LYS LYS X . n A 1 129 ASP 129 128 128 ASP ASP X . n A 1 130 LEU 130 129 129 LEU LEU X . n A 1 131 GLY 131 130 130 GLY GLY X . n A 1 132 ASP 132 131 131 ASP ASP X . n A 1 133 VAL 133 132 132 VAL VAL X . n A 1 134 TYR 134 133 133 TYR TYR X . n A 1 135 THR 135 134 134 THR THR X . n A 1 136 VAL 136 135 135 VAL VAL X . n A 1 137 LEU 137 136 136 LEU LEU X . n A 1 138 THR 138 137 137 THR THR X . n A 1 139 HIS 139 138 138 HIS HIS X . n A 1 140 GLN 140 139 139 GLN GLN X . n A 1 141 LYS 141 140 140 LYS LYS X . n A 1 142 ASP 142 141 141 ASP ASP X . n A 1 143 ALA 143 142 142 ALA ALA X . n A 1 144 GLU 144 143 143 GLU GLU X . n A 1 145 PRO 145 144 144 PRO PRO X . n A 1 146 SER 146 145 145 SER SER X . n A 1 147 ALA 147 146 146 ALA ALA X . n A 1 148 LYS 148 147 147 LYS LYS X . n A 1 149 VAL 149 148 148 VAL VAL X . n A 1 150 LYS 150 149 149 LYS LYS X . n A 1 151 SER 151 150 150 SER SER X . n A 1 152 ALA 152 151 151 ALA ALA X . n A 1 153 VAL 153 152 152 VAL VAL X . n A 1 154 THR 154 153 153 THR THR X . n A 1 155 GLN 155 154 154 GLN GLN X . n A 1 156 ALA 156 155 155 ALA ALA X . n A 1 157 GLY 157 156 156 GLY GLY X . n A 1 158 LEU 158 157 157 LEU LEU X . n A 1 159 GLN 159 158 158 GLN GLN X . n A 1 160 LEU 160 159 159 LEU LEU X . n A 1 161 SER 161 160 160 SER SER X . n A 1 162 GLN 162 161 161 GLN GLN X . n A 1 163 PHE 163 162 162 PHE PHE X . n A 1 164 VAL 164 163 163 VAL VAL X . n A 1 165 GLY 165 164 164 GLY GLY X . n A 1 166 THR 166 165 165 THR THR X . n A 1 167 LYS 167 166 166 LYS LYS X . n A 1 168 ASP 168 167 167 ASP ASP X . n A 1 169 LEU 169 168 168 LEU LEU X . n A 1 170 GLY 170 169 169 GLY GLY X . n A 1 171 CYS 171 170 170 CYS CYS X . n A 1 172 GLN 172 171 171 GLN GLN X . n A 1 173 TYR 173 172 172 TYR TYR X . n A 1 174 ASP 174 173 173 ASP ASP X . n A 1 175 ASP 175 174 174 ASP ASP X . n A 1 176 GLN 176 175 175 GLN GLN X . n A 1 177 PHE 177 176 176 PHE PHE X . n A 1 178 THR 178 177 177 THR THR X . n A 1 179 SER 179 178 178 SER SER X . n A 1 180 LEU 180 179 179 LEU LEU X . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM 1 180 180 HEM HEM X . C 3 IMD 1 181 181 IMD IMD X . D 4 HOH 1 182 182 HOH HOH X . D 4 HOH 2 183 183 HOH HOH X . D 4 HOH 3 184 184 HOH HOH X . D 4 HOH 4 185 185 HOH HOH X . D 4 HOH 5 186 186 HOH HOH X . D 4 HOH 6 187 187 HOH HOH X . D 4 HOH 7 188 188 HOH HOH X . D 4 HOH 8 189 189 HOH HOH X . D 4 HOH 9 190 190 HOH HOH X . D 4 HOH 10 191 191 HOH HOH X . D 4 HOH 11 192 192 HOH HOH X . D 4 HOH 12 193 193 HOH HOH X . D 4 HOH 13 194 194 HOH HOH X . D 4 HOH 14 195 195 HOH HOH X . D 4 HOH 15 196 196 HOH HOH X . D 4 HOH 16 197 197 HOH HOH X . D 4 HOH 17 198 198 HOH HOH X . D 4 HOH 18 199 199 HOH HOH X . D 4 HOH 19 200 200 HOH HOH X . D 4 HOH 20 201 201 HOH HOH X . D 4 HOH 21 202 202 HOH HOH X . D 4 HOH 22 203 203 HOH HOH X . D 4 HOH 23 204 204 HOH HOH X . D 4 HOH 24 205 205 HOH HOH X . D 4 HOH 25 206 206 HOH HOH X . D 4 HOH 26 207 207 HOH HOH X . D 4 HOH 27 208 208 HOH HOH X . D 4 HOH 28 209 209 HOH HOH X . D 4 HOH 29 210 210 HOH HOH X . D 4 HOH 30 211 211 HOH HOH X . D 4 HOH 31 212 212 HOH HOH X . D 4 HOH 32 213 213 HOH HOH X . D 4 HOH 33 214 214 HOH HOH X . D 4 HOH 34 215 215 HOH HOH X . D 4 HOH 35 216 216 HOH HOH X . D 4 HOH 36 217 217 HOH HOH X . D 4 HOH 37 218 218 HOH HOH X . D 4 HOH 38 219 219 HOH HOH X . D 4 HOH 39 220 220 HOH HOH X . D 4 HOH 40 221 221 HOH HOH X . D 4 HOH 41 222 222 HOH HOH X . D 4 HOH 42 223 223 HOH HOH X . D 4 HOH 43 224 224 HOH HOH X . D 4 HOH 44 225 225 HOH HOH X . D 4 HOH 45 226 226 HOH HOH X . D 4 HOH 46 227 227 HOH HOH X . D 4 HOH 47 228 228 HOH HOH X . D 4 HOH 48 229 229 HOH HOH X . D 4 HOH 49 230 230 HOH HOH X . D 4 HOH 50 231 231 HOH HOH X . D 4 HOH 51 232 232 HOH HOH X . D 4 HOH 52 233 233 HOH HOH X . D 4 HOH 53 234 234 HOH HOH X . D 4 HOH 54 235 235 HOH HOH X . D 4 HOH 55 237 237 HOH HOH X . D 4 HOH 56 238 238 HOH HOH X . D 4 HOH 57 239 239 HOH HOH X . D 4 HOH 58 240 240 HOH HOH X . D 4 HOH 59 241 241 HOH HOH X . D 4 HOH 60 242 242 HOH HOH X . D 4 HOH 61 243 243 HOH HOH X . D 4 HOH 62 244 244 HOH HOH X . D 4 HOH 63 245 245 HOH HOH X . D 4 HOH 64 246 246 HOH HOH X . D 4 HOH 65 247 247 HOH HOH X . D 4 HOH 66 248 248 HOH HOH X . D 4 HOH 67 249 249 HOH HOH X . D 4 HOH 68 250 250 HOH HOH X . D 4 HOH 69 251 251 HOH HOH X . D 4 HOH 70 252 252 HOH HOH X . D 4 HOH 71 253 253 HOH HOH X . D 4 HOH 72 254 254 HOH HOH X . D 4 HOH 73 255 255 HOH HOH X . D 4 HOH 74 256 256 HOH HOH X . D 4 HOH 75 257 257 HOH HOH X . D 4 HOH 76 258 258 HOH HOH X . D 4 HOH 77 259 259 HOH HOH X . D 4 HOH 78 260 260 HOH HOH X . D 4 HOH 79 261 261 HOH HOH X . D 4 HOH 80 262 262 HOH HOH X . D 4 HOH 81 263 263 HOH HOH X . D 4 HOH 82 264 264 HOH HOH X . D 4 HOH 83 265 265 HOH HOH X . D 4 HOH 84 266 266 HOH HOH X . D 4 HOH 85 267 267 HOH HOH X . D 4 HOH 86 268 268 HOH HOH X . D 4 HOH 87 269 269 HOH HOH X . D 4 HOH 88 270 270 HOH HOH X . D 4 HOH 89 271 271 HOH HOH X . D 4 HOH 90 272 272 HOH HOH X . D 4 HOH 91 273 273 HOH HOH X . D 4 HOH 92 275 275 HOH HOH X . D 4 HOH 93 276 276 HOH HOH X . D 4 HOH 94 277 277 HOH HOH X . D 4 HOH 95 278 278 HOH HOH X . D 4 HOH 96 279 279 HOH HOH X . D 4 HOH 97 280 280 HOH HOH X . D 4 HOH 98 281 281 HOH HOH X . D 4 HOH 99 282 282 HOH HOH X . D 4 HOH 100 283 283 HOH HOH X . D 4 HOH 101 284 284 HOH HOH X . D 4 HOH 102 285 285 HOH HOH X . D 4 HOH 103 286 286 HOH HOH X . D 4 HOH 104 287 287 HOH HOH X . D 4 HOH 105 288 288 HOH HOH X . D 4 HOH 106 289 289 HOH HOH X . D 4 HOH 107 290 290 HOH HOH X . D 4 HOH 108 291 291 HOH HOH X . D 4 HOH 109 292 292 HOH HOH X . D 4 HOH 110 293 293 HOH HOH X . D 4 HOH 111 294 294 HOH HOH X . D 4 HOH 112 295 295 HOH HOH X . D 4 HOH 113 296 296 HOH HOH X . D 4 HOH 114 297 297 HOH HOH X . D 4 HOH 115 298 298 HOH HOH X . D 4 HOH 116 299 299 HOH HOH X . D 4 HOH 117 300 300 HOH HOH X . D 4 HOH 118 301 301 HOH HOH X . D 4 HOH 119 302 302 HOH HOH X . D 4 HOH 120 304 304 HOH HOH X . D 4 HOH 121 306 306 HOH HOH X . D 4 HOH 122 307 307 HOH HOH X . D 4 HOH 123 308 308 HOH HOH X . D 4 HOH 124 309 309 HOH HOH X . D 4 HOH 125 310 310 HOH HOH X . D 4 HOH 126 311 311 HOH HOH X . D 4 HOH 127 312 312 HOH HOH X . D 4 HOH 128 313 313 HOH HOH X . D 4 HOH 129 315 315 HOH HOH X . D 4 HOH 130 316 316 HOH HOH X . D 4 HOH 131 317 317 HOH HOH X . D 4 HOH 132 318 318 HOH HOH X . D 4 HOH 133 319 319 HOH HOH X . D 4 HOH 134 320 320 HOH HOH X . D 4 HOH 135 321 321 HOH HOH X . D 4 HOH 136 322 322 HOH HOH X . D 4 HOH 137 323 323 HOH HOH X . D 4 HOH 138 324 324 HOH HOH X . D 4 HOH 139 325 325 HOH HOH X . D 4 HOH 140 326 326 HOH HOH X . D 4 HOH 141 327 327 HOH HOH X . D 4 HOH 142 328 328 HOH HOH X . D 4 HOH 143 329 329 HOH HOH X . D 4 HOH 144 330 330 HOH HOH X . D 4 HOH 145 331 331 HOH HOH X . D 4 HOH 146 332 332 HOH HOH X . D 4 HOH 147 333 333 HOH HOH X . D 4 HOH 148 334 334 HOH HOH X . D 4 HOH 149 335 335 HOH HOH X . D 4 HOH 150 336 336 HOH HOH X . D 4 HOH 151 337 337 HOH HOH X . D 4 HOH 152 338 338 HOH HOH X . D 4 HOH 153 339 339 HOH HOH X . D 4 HOH 154 340 340 HOH HOH X . D 4 HOH 155 341 341 HOH HOH X . D 4 HOH 156 343 343 HOH HOH X . D 4 HOH 157 344 344 HOH HOH X . D 4 HOH 158 345 345 HOH HOH X . D 4 HOH 159 365 365 HOH HOH X . D 4 HOH 160 367 367 HOH HOH X . D 4 HOH 161 368 368 HOH HOH X . D 4 HOH 162 369 369 HOH HOH X . D 4 HOH 163 370 370 HOH HOH X . D 4 HOH 164 371 371 HOH HOH X . D 4 HOH 165 372 372 HOH HOH X . D 4 HOH 166 373 373 HOH HOH X . D 4 HOH 167 374 374 HOH HOH X . D 4 HOH 168 375 375 HOH HOH X . D 4 HOH 169 376 376 HOH HOH X . D 4 HOH 170 377 377 HOH HOH X . D 4 HOH 171 378 378 HOH HOH X . D 4 HOH 172 379 379 HOH HOH X . D 4 HOH 173 381 381 HOH HOH X . D 4 HOH 174 382 382 HOH HOH X . D 4 HOH 175 383 383 HOH HOH X . D 4 HOH 176 384 384 HOH HOH X . D 4 HOH 177 386 386 HOH HOH X . D 4 HOH 178 387 387 HOH HOH X . D 4 HOH 179 388 388 HOH HOH X . D 4 HOH 180 389 389 HOH HOH X . D 4 HOH 181 390 390 HOH HOH X . D 4 HOH 182 391 391 HOH HOH X . D 4 HOH 183 392 392 HOH HOH X . D 4 HOH 184 393 393 HOH HOH X . D 4 HOH 185 395 395 HOH HOH X . D 4 HOH 186 396 396 HOH HOH X . D 4 HOH 187 397 397 HOH HOH X . D 4 HOH 188 398 398 HOH HOH X . D 4 HOH 189 399 399 HOH HOH X . D 4 HOH 190 401 401 HOH HOH X . D 4 HOH 191 402 402 HOH HOH X . D 4 HOH 192 404 404 HOH HOH X . D 4 HOH 193 405 405 HOH HOH X . D 4 HOH 194 406 406 HOH HOH X . D 4 HOH 195 407 407 HOH HOH X . D 4 HOH 196 408 408 HOH HOH X . D 4 HOH 197 409 409 HOH HOH X . D 4 HOH 198 411 411 HOH HOH X . D 4 HOH 199 412 412 HOH HOH X . D 4 HOH 200 413 413 HOH HOH X . D 4 HOH 201 414 414 HOH HOH X . D 4 HOH 202 415 415 HOH HOH X . D 4 HOH 203 416 416 HOH HOH X . D 4 HOH 204 417 417 HOH HOH X . D 4 HOH 205 418 418 HOH HOH X . D 4 HOH 206 420 420 HOH HOH X . D 4 HOH 207 421 421 HOH HOH X . D 4 HOH 208 422 422 HOH HOH X . D 4 HOH 209 423 423 HOH HOH X . D 4 HOH 210 425 425 HOH HOH X . D 4 HOH 211 426 426 HOH HOH X . D 4 HOH 212 427 427 HOH HOH X . D 4 HOH 213 429 429 HOH HOH X . D 4 HOH 214 431 431 HOH HOH X . D 4 HOH 215 432 432 HOH HOH X . D 4 HOH 216 433 433 HOH HOH X . D 4 HOH 217 434 434 HOH HOH X . D 4 HOH 218 435 435 HOH HOH X . D 4 HOH 219 436 436 HOH HOH X . D 4 HOH 220 437 437 HOH HOH X . D 4 HOH 221 438 438 HOH HOH X . D 4 HOH 222 439 439 HOH HOH X . D 4 HOH 223 441 441 HOH HOH X . D 4 HOH 224 442 442 HOH HOH X . D 4 HOH 225 443 443 HOH HOH X . D 4 HOH 226 444 444 HOH HOH X . D 4 HOH 227 445 445 HOH HOH X . D 4 HOH 228 447 447 HOH HOH X . D 4 HOH 229 448 448 HOH HOH X . D 4 HOH 230 449 449 HOH HOH X . D 4 HOH 231 450 450 HOH HOH X . D 4 HOH 232 452 452 HOH HOH X . D 4 HOH 233 453 453 HOH HOH X . D 4 HOH 234 455 455 HOH HOH X . D 4 HOH 235 500 500 HOH HOH X . D 4 HOH 236 501 501 HOH HOH X . D 4 HOH 237 503 503 HOH HOH X . D 4 HOH 238 504 504 HOH HOH X . D 4 HOH 239 505 505 HOH HOH X . D 4 HOH 240 506 506 HOH HOH X . D 4 HOH 241 507 507 HOH HOH X . D 4 HOH 242 509 509 HOH HOH X . D 4 HOH 243 510 510 HOH HOH X . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.22 ? 1 XDISPLAYF 'data reduction' . ? 2 d*TREK 'data scaling' . ? 3 # _cell.entry_id 1PM1 _cell.length_a 39.310 _cell.length_b 125.470 _cell.length_c 33.880 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1PM1 _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1PM1 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.08 _exptl_crystal.density_percent_sol 40.95 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'sodium citrate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2003-04-15 _diffrn_detector.details 'bent Si-mirror' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'bent Ge(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 14-BM-C' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 14-BM-C _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9000 # _reflns.entry_id 1PM1 _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.d_resolution_high 1.1 _reflns.d_resolution_low 28.7 _reflns.number_all 62884 _reflns.number_obs 62884 _reflns.percent_possible_obs 91.0 _reflns.pdbx_Rmerge_I_obs 0.077 _reflns.pdbx_Rsym_value 0.089 _reflns.pdbx_netI_over_sigmaI 9.3 _reflns.B_iso_Wilson_estimate 8.4 _reflns.pdbx_redundancy 3.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.10 _reflns_shell.d_res_low 1.14 _reflns_shell.percent_possible_all 81.2 _reflns_shell.Rmerge_I_obs 0.27 _reflns_shell.pdbx_Rsym_value 0.27 _reflns_shell.meanI_over_sigI_obs 1.0 _reflns_shell.pdbx_redundancy 3.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 5509 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1PM1 _refine.ls_number_reflns_obs 58988 _refine.ls_number_reflns_all 62884 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 28.64 _refine.ls_d_res_high 1.10 _refine.ls_percent_reflns_obs 89.94 _refine.ls_R_factor_obs 0.1547 _refine.ls_R_factor_all 0.1547 _refine.ls_R_factor_R_work 0.1536 _refine.ls_R_factor_R_free 0.177 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 3164 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.971 _refine.correlation_coeff_Fo_to_Fc_free 0.963 _refine.B_iso_mean 10.562 _refine.aniso_B[1][1] 0.56 _refine.aniso_B[2][2] -0.43 _refine.aniso_B[3][3] -0.13 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB entry 1EUO' _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model anisotropic _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.035 _refine.pdbx_overall_ESU_R_Free 0.035 _refine.overall_SU_ML 0.024 _refine.overall_SU_B 0.491 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1PM1 _refine_analyze.Luzzati_coordinate_error_obs 0.035 _refine_analyze.Luzzati_sigma_a_obs 0.024 _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free 0.035 _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1419 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 48 _refine_hist.number_atoms_solvent 244 _refine_hist.number_atoms_total 1711 _refine_hist.d_res_high 1.10 _refine_hist.d_res_low 28.64 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.022 0.021 ? 1502 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 1281 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.936 2.052 ? 2041 'X-RAY DIFFRACTION' ? r_angle_other_deg 2.021 3.000 ? 3020 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.982 5.000 ? 179 'X-RAY DIFFRACTION' ? r_chiral_restr 0.157 0.200 ? 218 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.012 0.020 ? 1648 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 267 'X-RAY DIFFRACTION' ? r_nbd_refined 0.215 0.200 ? 268 'X-RAY DIFFRACTION' ? r_nbd_other 0.266 0.200 ? 1564 'X-RAY DIFFRACTION' ? r_nbtor_other 0.103 0.200 ? 915 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.152 0.200 ? 160 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.191 0.200 ? 15 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.243 0.200 ? 64 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.191 0.200 ? 35 'X-RAY DIFFRACTION' ? r_mcbond_it 1.871 1.500 ? 893 'X-RAY DIFFRACTION' ? r_mcangle_it 2.611 2.000 ? 1440 'X-RAY DIFFRACTION' ? r_scbond_it 3.184 3.000 ? 609 'X-RAY DIFFRACTION' ? r_scangle_it 4.479 4.500 ? 601 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 1.945 2.000 ? 1502 'X-RAY DIFFRACTION' ? r_sphericity_free 6.979 2.000 ? 244 'X-RAY DIFFRACTION' ? r_sphericity_bonded 4.297 2.000 ? 1467 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.100 _refine_ls_shell.d_res_low 1.129 _refine_ls_shell.number_reflns_R_work 3708 _refine_ls_shell.R_factor_R_work 0.213 _refine_ls_shell.percent_reflns_obs 77 _refine_ls_shell.R_factor_R_free 0.231 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 208 _refine_ls_shell.number_reflns_obs 3708 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 1PM1 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1PM1 _struct.title 'Crystal structure of nitrophorin 2 L122V/L132V mutant complex with imidazole' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1PM1 _struct_keywords.pdbx_keywords 'BLOOD CLOTTING INHIBITOR' _struct_keywords.text 'beta barrel, lipocalin, imidazole, ferric heme, BLOOD CLOTTING INHIBITOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NP2_RHOPR _struct_ref.pdbx_db_accession Q26241 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DCSTNISPKQGLDKAKYFSGKWYVTHFLDKDPQVTDQYCSSFTPRESDGTVKEALYHYNANKKTSFYNIGEGKLESSGLQ YTAKYKTVDKKKAVLKEADEKNSYTLTVLEADDSSALVHICLREGSKDLGDLYTVLTHQKDAEPSAKVKSAVTQAGLQLS QFVGTKDLGCQYDDQFTSL ; _struct_ref.pdbx_align_begin 24 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1PM1 _struct_ref_seq.pdbx_strand_id X _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 180 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q26241 _struct_ref_seq.db_align_beg 24 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 202 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 179 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1PM1 MET X 1 ? UNP Q26241 ? ? 'initiating methionine' 0 1 1 1PM1 VAL X 123 ? UNP Q26241 LEU 145 'engineered mutation' 122 2 1 1PM1 VAL X 133 ? UNP Q26241 LEU 155 'engineered mutation' 132 3 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 14 ? PHE A 19 ? ASP X 13 PHE X 18 1 ? 6 HELX_P HELX_P2 2 SER A 146 ? ALA A 156 ? SER X 145 ALA X 155 1 ? 11 HELX_P HELX_P3 3 GLN A 159 ? PHE A 163 ? GLN X 158 PHE X 162 5 ? 5 HELX_P HELX_P4 4 LYS A 167 ? LEU A 169 ? LYS X 166 LEU X 168 5 ? 3 HELX_P HELX_P5 5 ASP A 174 ? SER A 179 ? ASP X 173 SER X 178 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 3 SG ? ? ? 1_555 A CYS 122 SG ? ? X CYS 2 X CYS 121 1_555 ? ? ? ? ? ? ? 2.085 ? ? disulf2 disulf ? ? A CYS 40 SG ? ? ? 1_555 A CYS 171 SG ? ? X CYS 39 X CYS 170 1_555 ? ? ? ? ? ? ? 2.013 ? ? metalc1 metalc ? ? A HIS 58 NE2 ? ? ? 1_555 B HEM . FE ? ? X HIS 57 X HEM 180 1_555 ? ? ? ? ? ? ? 2.018 ? ? metalc2 metalc ? ? B HEM . FE ? ? ? 1_555 C IMD . N1 ? ? X HEM 180 X IMD 181 1_555 ? ? ? ? ? ? ? 2.025 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 58 ? X HIS 57 ? 1_555 FE ? B HEM . ? X HEM 180 ? 1_555 NA ? B HEM . ? X HEM 180 ? 1_555 90.2 ? 2 NE2 ? A HIS 58 ? X HIS 57 ? 1_555 FE ? B HEM . ? X HEM 180 ? 1_555 NB ? B HEM . ? X HEM 180 ? 1_555 91.3 ? 3 NA ? B HEM . ? X HEM 180 ? 1_555 FE ? B HEM . ? X HEM 180 ? 1_555 NB ? B HEM . ? X HEM 180 ? 1_555 89.3 ? 4 NE2 ? A HIS 58 ? X HIS 57 ? 1_555 FE ? B HEM . ? X HEM 180 ? 1_555 NC ? B HEM . ? X HEM 180 ? 1_555 89.3 ? 5 NA ? B HEM . ? X HEM 180 ? 1_555 FE ? B HEM . ? X HEM 180 ? 1_555 NC ? B HEM . ? X HEM 180 ? 1_555 179.2 ? 6 NB ? B HEM . ? X HEM 180 ? 1_555 FE ? B HEM . ? X HEM 180 ? 1_555 NC ? B HEM . ? X HEM 180 ? 1_555 90.2 ? 7 NE2 ? A HIS 58 ? X HIS 57 ? 1_555 FE ? B HEM . ? X HEM 180 ? 1_555 ND ? B HEM . ? X HEM 180 ? 1_555 88.4 ? 8 NA ? B HEM . ? X HEM 180 ? 1_555 FE ? B HEM . ? X HEM 180 ? 1_555 ND ? B HEM . ? X HEM 180 ? 1_555 89.7 ? 9 NB ? B HEM . ? X HEM 180 ? 1_555 FE ? B HEM . ? X HEM 180 ? 1_555 ND ? B HEM . ? X HEM 180 ? 1_555 178.9 ? 10 NC ? B HEM . ? X HEM 180 ? 1_555 FE ? B HEM . ? X HEM 180 ? 1_555 ND ? B HEM . ? X HEM 180 ? 1_555 90.8 ? 11 NE2 ? A HIS 58 ? X HIS 57 ? 1_555 FE ? B HEM . ? X HEM 180 ? 1_555 N1 ? C IMD . ? X IMD 181 ? 1_555 178.0 ? 12 NA ? B HEM . ? X HEM 180 ? 1_555 FE ? B HEM . ? X HEM 180 ? 1_555 N1 ? C IMD . ? X IMD 181 ? 1_555 90.6 ? 13 NB ? B HEM . ? X HEM 180 ? 1_555 FE ? B HEM . ? X HEM 180 ? 1_555 N1 ? C IMD . ? X IMD 181 ? 1_555 90.5 ? 14 NC ? B HEM . ? X HEM 180 ? 1_555 FE ? B HEM . ? X HEM 180 ? 1_555 N1 ? C IMD . ? X IMD 181 ? 1_555 90.0 ? 15 ND ? B HEM . ? X HEM 180 ? 1_555 FE ? B HEM . ? X HEM 180 ? 1_555 N1 ? C IMD . ? X IMD 181 ? 1_555 89.8 ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 3 ? CYS A 122 ? CYS X 2 ? 1_555 CYS X 121 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 40 ? CYS A 171 ? CYS X 39 ? 1_555 CYS X 170 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 95 ? LYS A 97 ? VAL X 94 LYS X 96 A 2 GLN A 81 ? VAL A 89 ? GLN X 80 VAL X 88 A 3 THR A 65 ? LEU A 75 ? THR X 64 LEU X 74 A 4 THR A 51 ? ASN A 60 ? THR X 50 ASN X 59 A 5 TYR A 39 ? SER A 48 ? TYR X 38 SER X 47 A 6 TRP A 23 ? LEU A 29 ? TRP X 22 LEU X 28 A 7 VAL A 164 ? GLY A 165 ? VAL X 163 GLY X 164 B 1 VAL A 95 ? LYS A 97 ? VAL X 94 LYS X 96 B 2 GLN A 81 ? VAL A 89 ? GLN X 80 VAL X 88 B 3 ASN A 103 ? ALA A 112 ? ASN X 102 ALA X 111 B 4 SER A 116 ? GLU A 125 ? SER X 115 GLU X 124 B 5 LYS A 128 ? THR A 138 ? LYS X 127 THR X 137 B 6 TRP A 23 ? LEU A 29 ? TRP X 22 LEU X 28 B 7 VAL A 164 ? GLY A 165 ? VAL X 163 GLY X 164 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LEU A 96 ? O LEU X 95 N THR A 88 ? N THR X 87 A 2 3 O LYS A 87 ? O LYS X 86 N ILE A 70 ? N ILE X 69 A 3 4 O GLY A 73 ? O GLY X 72 N VAL A 52 ? N VAL X 51 A 4 5 O TYR A 59 ? O TYR X 58 N CYS A 40 ? N CYS X 39 A 5 6 O PHE A 43 ? O PHE X 42 N TRP A 23 ? N TRP X 22 A 6 7 N PHE A 28 ? N PHE X 27 O VAL A 164 ? O VAL X 163 B 1 2 O LEU A 96 ? O LEU X 95 N THR A 88 ? N THR X 87 B 2 3 N ALA A 84 ? N ALA X 83 O TYR A 105 ? O TYR X 104 B 3 4 N SER A 104 ? N SER X 103 O ARG A 124 ? O ARG X 123 B 4 5 N GLU A 125 ? N GLU X 124 O LYS A 128 ? O LYS X 127 B 5 6 O VAL A 136 ? O VAL X 135 N HIS A 27 ? N HIS X 26 B 6 7 N PHE A 28 ? N PHE X 27 O VAL A 164 ? O VAL X 163 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software X HEM 180 ? 19 'BINDING SITE FOR RESIDUE HEM X 180' AC2 Software X IMD 181 ? 5 'BINDING SITE FOR RESIDUE IMD X 181' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 19 PHE A 28 ? PHE X 27 . ? 1_555 ? 2 AC1 19 TYR A 39 ? TYR X 38 . ? 1_555 ? 3 AC1 19 SER A 41 ? SER X 40 . ? 1_555 ? 4 AC1 19 GLU A 54 ? GLU X 53 . ? 1_555 ? 5 AC1 19 LEU A 56 ? LEU X 55 . ? 1_555 ? 6 AC1 19 HIS A 58 ? HIS X 57 . ? 1_555 ? 7 AC1 19 ASN A 69 ? ASN X 68 . ? 1_555 ? 8 AC1 19 TYR A 86 ? TYR X 85 . ? 1_555 ? 9 AC1 19 TYR A 105 ? TYR X 104 . ? 1_555 ? 10 AC1 19 LEU A 107 ? LEU X 106 . ? 1_555 ? 11 AC1 19 VAL A 123 ? VAL X 122 . ? 1_555 ? 12 AC1 19 LEU A 130 ? LEU X 129 . ? 1_555 ? 13 AC1 19 IMD C . ? IMD X 181 . ? 1_555 ? 14 AC1 19 HOH D . ? HOH X 223 . ? 1_555 ? 15 AC1 19 HOH D . ? HOH X 291 . ? 1_555 ? 16 AC1 19 HOH D . ? HOH X 367 . ? 1_555 ? 17 AC1 19 HOH D . ? HOH X 391 . ? 1_555 ? 18 AC1 19 HOH D . ? HOH X 416 . ? 1_555 ? 19 AC1 19 HOH D . ? HOH X 433 . ? 1_555 ? 20 AC2 5 ILE A 121 ? ILE X 120 . ? 1_555 ? 21 AC2 5 VAL A 123 ? VAL X 122 . ? 1_555 ? 22 AC2 5 GLY A 131 ? GLY X 130 . ? 1_555 ? 23 AC2 5 VAL A 133 ? VAL X 132 . ? 1_555 ? 24 AC2 5 HEM B . ? HEM X 180 . ? 1_555 ? # _pdbx_entry_details.entry_id 1PM1 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CG _pdbx_validate_rmsd_bond.auth_asym_id_1 X _pdbx_validate_rmsd_bond.auth_comp_id_1 GLN _pdbx_validate_rmsd_bond.auth_seq_id_1 171 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CD _pdbx_validate_rmsd_bond.auth_asym_id_2 X _pdbx_validate_rmsd_bond.auth_comp_id_2 GLN _pdbx_validate_rmsd_bond.auth_seq_id_2 171 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 B _pdbx_validate_rmsd_bond.bond_value 1.313 _pdbx_validate_rmsd_bond.bond_target_value 1.506 _pdbx_validate_rmsd_bond.bond_deviation -0.193 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.023 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB X ASP 13 ? ? CG X ASP 13 ? ? OD2 X ASP 13 ? ? 124.03 118.30 5.73 0.90 N 2 1 CB X GLN 171 ? ? CG X GLN 171 ? ? CD X GLN 171 ? B 132.31 111.60 20.71 2.60 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASN _pdbx_validate_torsion.auth_asym_id X _pdbx_validate_torsion.auth_seq_id 5 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -89.59 _pdbx_validate_torsion.psi 49.97 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id X _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 238 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HEM CHA C N N 137 HEM CHB C N N 138 HEM CHC C N N 139 HEM CHD C N N 140 HEM C1A C Y N 141 HEM C2A C Y N 142 HEM C3A C Y N 143 HEM C4A C Y N 144 HEM CMA C N N 145 HEM CAA C N N 146 HEM CBA C N N 147 HEM CGA C N N 148 HEM O1A O N N 149 HEM O2A O N N 150 HEM C1B C N N 151 HEM C2B C N N 152 HEM C3B C N N 153 HEM C4B C N N 154 HEM CMB C N N 155 HEM CAB C N N 156 HEM CBB C N N 157 HEM C1C C Y N 158 HEM C2C C Y N 159 HEM C3C C Y N 160 HEM C4C C Y N 161 HEM CMC C N N 162 HEM CAC C N N 163 HEM CBC C N N 164 HEM C1D C N N 165 HEM C2D C N N 166 HEM C3D C N N 167 HEM C4D C N N 168 HEM CMD C N N 169 HEM CAD C N N 170 HEM CBD C N N 171 HEM CGD C N N 172 HEM O1D O N N 173 HEM O2D O N N 174 HEM NA N Y N 175 HEM NB N N N 176 HEM NC N Y N 177 HEM ND N N N 178 HEM FE FE N N 179 HEM HHB H N N 180 HEM HHC H N N 181 HEM HHD H N N 182 HEM HMA H N N 183 HEM HMAA H N N 184 HEM HMAB H N N 185 HEM HAA H N N 186 HEM HAAA H N N 187 HEM HBA H N N 188 HEM HBAA H N N 189 HEM HMB H N N 190 HEM HMBA H N N 191 HEM HMBB H N N 192 HEM HAB H N N 193 HEM HBB H N N 194 HEM HBBA H N N 195 HEM HMC H N N 196 HEM HMCA H N N 197 HEM HMCB H N N 198 HEM HAC H N N 199 HEM HBC H N N 200 HEM HBCA H N N 201 HEM HMD H N N 202 HEM HMDA H N N 203 HEM HMDB H N N 204 HEM HAD H N N 205 HEM HADA H N N 206 HEM HBD H N N 207 HEM HBDA H N N 208 HEM H2A H N N 209 HEM H2D H N N 210 HEM HHA H N N 211 HIS N N N N 212 HIS CA C N S 213 HIS C C N N 214 HIS O O N N 215 HIS CB C N N 216 HIS CG C Y N 217 HIS ND1 N Y N 218 HIS CD2 C Y N 219 HIS CE1 C Y N 220 HIS NE2 N Y N 221 HIS OXT O N N 222 HIS H H N N 223 HIS H2 H N N 224 HIS HA H N N 225 HIS HB2 H N N 226 HIS HB3 H N N 227 HIS HD1 H N N 228 HIS HD2 H N N 229 HIS HE1 H N N 230 HIS HE2 H N N 231 HIS HXT H N N 232 HOH O O N N 233 HOH H1 H N N 234 HOH H2 H N N 235 ILE N N N N 236 ILE CA C N S 237 ILE C C N N 238 ILE O O N N 239 ILE CB C N S 240 ILE CG1 C N N 241 ILE CG2 C N N 242 ILE CD1 C N N 243 ILE OXT O N N 244 ILE H H N N 245 ILE H2 H N N 246 ILE HA H N N 247 ILE HB H N N 248 ILE HG12 H N N 249 ILE HG13 H N N 250 ILE HG21 H N N 251 ILE HG22 H N N 252 ILE HG23 H N N 253 ILE HD11 H N N 254 ILE HD12 H N N 255 ILE HD13 H N N 256 ILE HXT H N N 257 IMD N1 N Y N 258 IMD C2 C Y N 259 IMD N3 N Y N 260 IMD C4 C Y N 261 IMD C5 C Y N 262 IMD HN1 H N N 263 IMD H2 H N N 264 IMD HN3 H N N 265 IMD H4 H N N 266 IMD H5 H N N 267 LEU N N N N 268 LEU CA C N S 269 LEU C C N N 270 LEU O O N N 271 LEU CB C N N 272 LEU CG C N N 273 LEU CD1 C N N 274 LEU CD2 C N N 275 LEU OXT O N N 276 LEU H H N N 277 LEU H2 H N N 278 LEU HA H N N 279 LEU HB2 H N N 280 LEU HB3 H N N 281 LEU HG H N N 282 LEU HD11 H N N 283 LEU HD12 H N N 284 LEU HD13 H N N 285 LEU HD21 H N N 286 LEU HD22 H N N 287 LEU HD23 H N N 288 LEU HXT H N N 289 LYS N N N N 290 LYS CA C N S 291 LYS C C N N 292 LYS O O N N 293 LYS CB C N N 294 LYS CG C N N 295 LYS CD C N N 296 LYS CE C N N 297 LYS NZ N N N 298 LYS OXT O N N 299 LYS H H N N 300 LYS H2 H N N 301 LYS HA H N N 302 LYS HB2 H N N 303 LYS HB3 H N N 304 LYS HG2 H N N 305 LYS HG3 H N N 306 LYS HD2 H N N 307 LYS HD3 H N N 308 LYS HE2 H N N 309 LYS HE3 H N N 310 LYS HZ1 H N N 311 LYS HZ2 H N N 312 LYS HZ3 H N N 313 LYS HXT H N N 314 MET N N N N 315 MET CA C N S 316 MET C C N N 317 MET O O N N 318 MET CB C N N 319 MET CG C N N 320 MET SD S N N 321 MET CE C N N 322 MET OXT O N N 323 MET H H N N 324 MET H2 H N N 325 MET HA H N N 326 MET HB2 H N N 327 MET HB3 H N N 328 MET HG2 H N N 329 MET HG3 H N N 330 MET HE1 H N N 331 MET HE2 H N N 332 MET HE3 H N N 333 MET HXT H N N 334 PHE N N N N 335 PHE CA C N S 336 PHE C C N N 337 PHE O O N N 338 PHE CB C N N 339 PHE CG C Y N 340 PHE CD1 C Y N 341 PHE CD2 C Y N 342 PHE CE1 C Y N 343 PHE CE2 C Y N 344 PHE CZ C Y N 345 PHE OXT O N N 346 PHE H H N N 347 PHE H2 H N N 348 PHE HA H N N 349 PHE HB2 H N N 350 PHE HB3 H N N 351 PHE HD1 H N N 352 PHE HD2 H N N 353 PHE HE1 H N N 354 PHE HE2 H N N 355 PHE HZ H N N 356 PHE HXT H N N 357 PRO N N N N 358 PRO CA C N S 359 PRO C C N N 360 PRO O O N N 361 PRO CB C N N 362 PRO CG C N N 363 PRO CD C N N 364 PRO OXT O N N 365 PRO H H N N 366 PRO HA H N N 367 PRO HB2 H N N 368 PRO HB3 H N N 369 PRO HG2 H N N 370 PRO HG3 H N N 371 PRO HD2 H N N 372 PRO HD3 H N N 373 PRO HXT H N N 374 SER N N N N 375 SER CA C N S 376 SER C C N N 377 SER O O N N 378 SER CB C N N 379 SER OG O N N 380 SER OXT O N N 381 SER H H N N 382 SER H2 H N N 383 SER HA H N N 384 SER HB2 H N N 385 SER HB3 H N N 386 SER HG H N N 387 SER HXT H N N 388 THR N N N N 389 THR CA C N S 390 THR C C N N 391 THR O O N N 392 THR CB C N R 393 THR OG1 O N N 394 THR CG2 C N N 395 THR OXT O N N 396 THR H H N N 397 THR H2 H N N 398 THR HA H N N 399 THR HB H N N 400 THR HG1 H N N 401 THR HG21 H N N 402 THR HG22 H N N 403 THR HG23 H N N 404 THR HXT H N N 405 TRP N N N N 406 TRP CA C N S 407 TRP C C N N 408 TRP O O N N 409 TRP CB C N N 410 TRP CG C Y N 411 TRP CD1 C Y N 412 TRP CD2 C Y N 413 TRP NE1 N Y N 414 TRP CE2 C Y N 415 TRP CE3 C Y N 416 TRP CZ2 C Y N 417 TRP CZ3 C Y N 418 TRP CH2 C Y N 419 TRP OXT O N N 420 TRP H H N N 421 TRP H2 H N N 422 TRP HA H N N 423 TRP HB2 H N N 424 TRP HB3 H N N 425 TRP HD1 H N N 426 TRP HE1 H N N 427 TRP HE3 H N N 428 TRP HZ2 H N N 429 TRP HZ3 H N N 430 TRP HH2 H N N 431 TRP HXT H N N 432 TYR N N N N 433 TYR CA C N S 434 TYR C C N N 435 TYR O O N N 436 TYR CB C N N 437 TYR CG C Y N 438 TYR CD1 C Y N 439 TYR CD2 C Y N 440 TYR CE1 C Y N 441 TYR CE2 C Y N 442 TYR CZ C Y N 443 TYR OH O N N 444 TYR OXT O N N 445 TYR H H N N 446 TYR H2 H N N 447 TYR HA H N N 448 TYR HB2 H N N 449 TYR HB3 H N N 450 TYR HD1 H N N 451 TYR HD2 H N N 452 TYR HE1 H N N 453 TYR HE2 H N N 454 TYR HH H N N 455 TYR HXT H N N 456 VAL N N N N 457 VAL CA C N S 458 VAL C C N N 459 VAL O O N N 460 VAL CB C N N 461 VAL CG1 C N N 462 VAL CG2 C N N 463 VAL OXT O N N 464 VAL H H N N 465 VAL H2 H N N 466 VAL HA H N N 467 VAL HB H N N 468 VAL HG11 H N N 469 VAL HG12 H N N 470 VAL HG13 H N N 471 VAL HG21 H N N 472 VAL HG22 H N N 473 VAL HG23 H N N 474 VAL HXT H N N 475 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HEM CHA C1A sing N N 129 HEM CHA C4D doub N N 130 HEM CHA HHA sing N N 131 HEM CHB C4A sing N N 132 HEM CHB C1B doub N N 133 HEM CHB HHB sing N N 134 HEM CHC C4B sing N N 135 HEM CHC C1C doub N N 136 HEM CHC HHC sing N N 137 HEM CHD C4C doub N N 138 HEM CHD C1D sing N N 139 HEM CHD HHD sing N N 140 HEM C1A C2A doub Y N 141 HEM C1A NA sing Y N 142 HEM C2A C3A sing Y N 143 HEM C2A CAA sing N N 144 HEM C3A C4A doub Y N 145 HEM C3A CMA sing N N 146 HEM C4A NA sing Y N 147 HEM CMA HMA sing N N 148 HEM CMA HMAA sing N N 149 HEM CMA HMAB sing N N 150 HEM CAA CBA sing N N 151 HEM CAA HAA sing N N 152 HEM CAA HAAA sing N N 153 HEM CBA CGA sing N N 154 HEM CBA HBA sing N N 155 HEM CBA HBAA sing N N 156 HEM CGA O1A doub N N 157 HEM CGA O2A sing N N 158 HEM C1B C2B sing N N 159 HEM C1B NB sing N N 160 HEM C2B C3B doub N N 161 HEM C2B CMB sing N N 162 HEM C3B C4B sing N N 163 HEM C3B CAB sing N N 164 HEM C4B NB doub N N 165 HEM CMB HMB sing N N 166 HEM CMB HMBA sing N N 167 HEM CMB HMBB sing N N 168 HEM CAB CBB doub N N 169 HEM CAB HAB sing N N 170 HEM CBB HBB sing N N 171 HEM CBB HBBA sing N N 172 HEM C1C C2C sing Y N 173 HEM C1C NC sing Y N 174 HEM C2C C3C doub Y N 175 HEM C2C CMC sing N N 176 HEM C3C C4C sing Y N 177 HEM C3C CAC sing N N 178 HEM C4C NC sing Y N 179 HEM CMC HMC sing N N 180 HEM CMC HMCA sing N N 181 HEM CMC HMCB sing N N 182 HEM CAC CBC doub N N 183 HEM CAC HAC sing N N 184 HEM CBC HBC sing N N 185 HEM CBC HBCA sing N N 186 HEM C1D C2D sing N N 187 HEM C1D ND doub N N 188 HEM C2D C3D doub N N 189 HEM C2D CMD sing N N 190 HEM C3D C4D sing N N 191 HEM C3D CAD sing N N 192 HEM C4D ND sing N N 193 HEM CMD HMD sing N N 194 HEM CMD HMDA sing N N 195 HEM CMD HMDB sing N N 196 HEM CAD CBD sing N N 197 HEM CAD HAD sing N N 198 HEM CAD HADA sing N N 199 HEM CBD CGD sing N N 200 HEM CBD HBD sing N N 201 HEM CBD HBDA sing N N 202 HEM CGD O1D doub N N 203 HEM CGD O2D sing N N 204 HEM O2A H2A sing N N 205 HEM O2D H2D sing N N 206 HEM FE NA sing N N 207 HEM FE NB sing N N 208 HEM FE NC sing N N 209 HEM FE ND sing N N 210 HIS N CA sing N N 211 HIS N H sing N N 212 HIS N H2 sing N N 213 HIS CA C sing N N 214 HIS CA CB sing N N 215 HIS CA HA sing N N 216 HIS C O doub N N 217 HIS C OXT sing N N 218 HIS CB CG sing N N 219 HIS CB HB2 sing N N 220 HIS CB HB3 sing N N 221 HIS CG ND1 sing Y N 222 HIS CG CD2 doub Y N 223 HIS ND1 CE1 doub Y N 224 HIS ND1 HD1 sing N N 225 HIS CD2 NE2 sing Y N 226 HIS CD2 HD2 sing N N 227 HIS CE1 NE2 sing Y N 228 HIS CE1 HE1 sing N N 229 HIS NE2 HE2 sing N N 230 HIS OXT HXT sing N N 231 HOH O H1 sing N N 232 HOH O H2 sing N N 233 ILE N CA sing N N 234 ILE N H sing N N 235 ILE N H2 sing N N 236 ILE CA C sing N N 237 ILE CA CB sing N N 238 ILE CA HA sing N N 239 ILE C O doub N N 240 ILE C OXT sing N N 241 ILE CB CG1 sing N N 242 ILE CB CG2 sing N N 243 ILE CB HB sing N N 244 ILE CG1 CD1 sing N N 245 ILE CG1 HG12 sing N N 246 ILE CG1 HG13 sing N N 247 ILE CG2 HG21 sing N N 248 ILE CG2 HG22 sing N N 249 ILE CG2 HG23 sing N N 250 ILE CD1 HD11 sing N N 251 ILE CD1 HD12 sing N N 252 ILE CD1 HD13 sing N N 253 ILE OXT HXT sing N N 254 IMD N1 C2 sing Y N 255 IMD N1 C5 sing Y N 256 IMD N1 HN1 sing N N 257 IMD C2 N3 doub Y N 258 IMD C2 H2 sing N N 259 IMD N3 C4 sing Y N 260 IMD N3 HN3 sing N N 261 IMD C4 C5 doub Y N 262 IMD C4 H4 sing N N 263 IMD C5 H5 sing N N 264 LEU N CA sing N N 265 LEU N H sing N N 266 LEU N H2 sing N N 267 LEU CA C sing N N 268 LEU CA CB sing N N 269 LEU CA HA sing N N 270 LEU C O doub N N 271 LEU C OXT sing N N 272 LEU CB CG sing N N 273 LEU CB HB2 sing N N 274 LEU CB HB3 sing N N 275 LEU CG CD1 sing N N 276 LEU CG CD2 sing N N 277 LEU CG HG sing N N 278 LEU CD1 HD11 sing N N 279 LEU CD1 HD12 sing N N 280 LEU CD1 HD13 sing N N 281 LEU CD2 HD21 sing N N 282 LEU CD2 HD22 sing N N 283 LEU CD2 HD23 sing N N 284 LEU OXT HXT sing N N 285 LYS N CA sing N N 286 LYS N H sing N N 287 LYS N H2 sing N N 288 LYS CA C sing N N 289 LYS CA CB sing N N 290 LYS CA HA sing N N 291 LYS C O doub N N 292 LYS C OXT sing N N 293 LYS CB CG sing N N 294 LYS CB HB2 sing N N 295 LYS CB HB3 sing N N 296 LYS CG CD sing N N 297 LYS CG HG2 sing N N 298 LYS CG HG3 sing N N 299 LYS CD CE sing N N 300 LYS CD HD2 sing N N 301 LYS CD HD3 sing N N 302 LYS CE NZ sing N N 303 LYS CE HE2 sing N N 304 LYS CE HE3 sing N N 305 LYS NZ HZ1 sing N N 306 LYS NZ HZ2 sing N N 307 LYS NZ HZ3 sing N N 308 LYS OXT HXT sing N N 309 MET N CA sing N N 310 MET N H sing N N 311 MET N H2 sing N N 312 MET CA C sing N N 313 MET CA CB sing N N 314 MET CA HA sing N N 315 MET C O doub N N 316 MET C OXT sing N N 317 MET CB CG sing N N 318 MET CB HB2 sing N N 319 MET CB HB3 sing N N 320 MET CG SD sing N N 321 MET CG HG2 sing N N 322 MET CG HG3 sing N N 323 MET SD CE sing N N 324 MET CE HE1 sing N N 325 MET CE HE2 sing N N 326 MET CE HE3 sing N N 327 MET OXT HXT sing N N 328 PHE N CA sing N N 329 PHE N H sing N N 330 PHE N H2 sing N N 331 PHE CA C sing N N 332 PHE CA CB sing N N 333 PHE CA HA sing N N 334 PHE C O doub N N 335 PHE C OXT sing N N 336 PHE CB CG sing N N 337 PHE CB HB2 sing N N 338 PHE CB HB3 sing N N 339 PHE CG CD1 doub Y N 340 PHE CG CD2 sing Y N 341 PHE CD1 CE1 sing Y N 342 PHE CD1 HD1 sing N N 343 PHE CD2 CE2 doub Y N 344 PHE CD2 HD2 sing N N 345 PHE CE1 CZ doub Y N 346 PHE CE1 HE1 sing N N 347 PHE CE2 CZ sing Y N 348 PHE CE2 HE2 sing N N 349 PHE CZ HZ sing N N 350 PHE OXT HXT sing N N 351 PRO N CA sing N N 352 PRO N CD sing N N 353 PRO N H sing N N 354 PRO CA C sing N N 355 PRO CA CB sing N N 356 PRO CA HA sing N N 357 PRO C O doub N N 358 PRO C OXT sing N N 359 PRO CB CG sing N N 360 PRO CB HB2 sing N N 361 PRO CB HB3 sing N N 362 PRO CG CD sing N N 363 PRO CG HG2 sing N N 364 PRO CG HG3 sing N N 365 PRO CD HD2 sing N N 366 PRO CD HD3 sing N N 367 PRO OXT HXT sing N N 368 SER N CA sing N N 369 SER N H sing N N 370 SER N H2 sing N N 371 SER CA C sing N N 372 SER CA CB sing N N 373 SER CA HA sing N N 374 SER C O doub N N 375 SER C OXT sing N N 376 SER CB OG sing N N 377 SER CB HB2 sing N N 378 SER CB HB3 sing N N 379 SER OG HG sing N N 380 SER OXT HXT sing N N 381 THR N CA sing N N 382 THR N H sing N N 383 THR N H2 sing N N 384 THR CA C sing N N 385 THR CA CB sing N N 386 THR CA HA sing N N 387 THR C O doub N N 388 THR C OXT sing N N 389 THR CB OG1 sing N N 390 THR CB CG2 sing N N 391 THR CB HB sing N N 392 THR OG1 HG1 sing N N 393 THR CG2 HG21 sing N N 394 THR CG2 HG22 sing N N 395 THR CG2 HG23 sing N N 396 THR OXT HXT sing N N 397 TRP N CA sing N N 398 TRP N H sing N N 399 TRP N H2 sing N N 400 TRP CA C sing N N 401 TRP CA CB sing N N 402 TRP CA HA sing N N 403 TRP C O doub N N 404 TRP C OXT sing N N 405 TRP CB CG sing N N 406 TRP CB HB2 sing N N 407 TRP CB HB3 sing N N 408 TRP CG CD1 doub Y N 409 TRP CG CD2 sing Y N 410 TRP CD1 NE1 sing Y N 411 TRP CD1 HD1 sing N N 412 TRP CD2 CE2 doub Y N 413 TRP CD2 CE3 sing Y N 414 TRP NE1 CE2 sing Y N 415 TRP NE1 HE1 sing N N 416 TRP CE2 CZ2 sing Y N 417 TRP CE3 CZ3 doub Y N 418 TRP CE3 HE3 sing N N 419 TRP CZ2 CH2 doub Y N 420 TRP CZ2 HZ2 sing N N 421 TRP CZ3 CH2 sing Y N 422 TRP CZ3 HZ3 sing N N 423 TRP CH2 HH2 sing N N 424 TRP OXT HXT sing N N 425 TYR N CA sing N N 426 TYR N H sing N N 427 TYR N H2 sing N N 428 TYR CA C sing N N 429 TYR CA CB sing N N 430 TYR CA HA sing N N 431 TYR C O doub N N 432 TYR C OXT sing N N 433 TYR CB CG sing N N 434 TYR CB HB2 sing N N 435 TYR CB HB3 sing N N 436 TYR CG CD1 doub Y N 437 TYR CG CD2 sing Y N 438 TYR CD1 CE1 sing Y N 439 TYR CD1 HD1 sing N N 440 TYR CD2 CE2 doub Y N 441 TYR CD2 HD2 sing N N 442 TYR CE1 CZ doub Y N 443 TYR CE1 HE1 sing N N 444 TYR CE2 CZ sing Y N 445 TYR CE2 HE2 sing N N 446 TYR CZ OH sing N N 447 TYR OH HH sing N N 448 TYR OXT HXT sing N N 449 VAL N CA sing N N 450 VAL N H sing N N 451 VAL N H2 sing N N 452 VAL CA C sing N N 453 VAL CA CB sing N N 454 VAL CA HA sing N N 455 VAL C O doub N N 456 VAL C OXT sing N N 457 VAL CB CG1 sing N N 458 VAL CB CG2 sing N N 459 VAL CB HB sing N N 460 VAL CG1 HG11 sing N N 461 VAL CG1 HG12 sing N N 462 VAL CG1 HG13 sing N N 463 VAL CG2 HG21 sing N N 464 VAL CG2 HG22 sing N N 465 VAL CG2 HG23 sing N N 466 VAL OXT HXT sing N N 467 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1EUO _pdbx_initial_refinement_model.details 'PDB entry 1EUO' # _atom_sites.entry_id 1PM1 _atom_sites.fract_transf_matrix[1][1] 0.025439 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007970 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.029516 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE N O S # loop_