data_1PNF # _entry.id 1PNF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1PNF pdb_00001pnf 10.2210/pdb1pnf/pdb WWPDB D_1000175749 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1996-03-08 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-11-29 5 'Structure model' 1 4 2018-06-27 6 'Structure model' 2 0 2020-07-29 7 'Structure model' 2 1 2024-10-16 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 6 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Non-polymer description' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' Other 6 5 'Structure model' Advisory 7 5 'Structure model' 'Data collection' 8 5 'Structure model' 'Derived calculations' 9 6 'Structure model' 'Atomic model' 10 6 'Structure model' 'Data collection' 11 6 'Structure model' 'Derived calculations' 12 6 'Structure model' 'Structure summary' 13 7 'Structure model' 'Data collection' 14 7 'Structure model' 'Database references' 15 7 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_database_status 2 4 'Structure model' struct_conf 3 4 'Structure model' struct_conf_type 4 5 'Structure model' pdbx_distant_solvent_atoms 5 5 'Structure model' pdbx_struct_sheet_hbond 6 5 'Structure model' struct_conf 7 5 'Structure model' struct_sheet 8 5 'Structure model' struct_sheet_order 9 5 'Structure model' struct_sheet_range 10 6 'Structure model' atom_site 11 6 'Structure model' chem_comp 12 6 'Structure model' entity 13 6 'Structure model' pdbx_branch_scheme 14 6 'Structure model' pdbx_chem_comp_identifier 15 6 'Structure model' pdbx_entity_branch 16 6 'Structure model' pdbx_entity_branch_descriptor 17 6 'Structure model' pdbx_entity_branch_link 18 6 'Structure model' pdbx_entity_branch_list 19 6 'Structure model' pdbx_entity_nonpoly 20 6 'Structure model' pdbx_nonpoly_scheme 21 6 'Structure model' pdbx_struct_assembly_gen 22 6 'Structure model' struct_asym 23 6 'Structure model' struct_conn 24 6 'Structure model' struct_site 25 6 'Structure model' struct_site_gen 26 7 'Structure model' chem_comp 27 7 'Structure model' chem_comp_atom 28 7 'Structure model' chem_comp_bond 29 7 'Structure model' database_2 30 7 'Structure model' pdbx_entry_details 31 7 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_pdbx_database_status.process_site' 2 6 'Structure model' '_atom_site.auth_asym_id' 3 6 'Structure model' '_atom_site.auth_atom_id' 4 6 'Structure model' '_atom_site.auth_seq_id' 5 6 'Structure model' '_atom_site.label_asym_id' 6 6 'Structure model' '_atom_site.label_atom_id' 7 6 'Structure model' '_atom_site.label_entity_id' 8 6 'Structure model' '_chem_comp.name' 9 6 'Structure model' '_chem_comp.type' 10 6 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 11 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 6 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 13 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 14 6 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 15 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 16 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' 17 7 'Structure model' '_chem_comp.pdbx_synonyms' 18 7 'Structure model' '_database_2.pdbx_DOI' 19 7 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1PNF _pdbx_database_status.recvd_initial_deposition_date 1995-10-11 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Van Roey, P.' 1 'Kuhn, P.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Active site and oligosaccharide recognition residues of peptide-N4-(N-acetyl-beta-D-glucosaminyl)asparagine amidase F.' J.Biol.Chem. 270 29493 29497 1995 JBCHA3 US 0021-9258 0071 ? 7493989 10.1074/jbc.270.49.29493 1 ;Crystallization and Preliminary Crystallographic Analysis of Peptide-N(4)-(N-Acetyl-Beta-D-Glucosaminyl) Asparagine Amidase (Pngase F) ; J.Mol.Biol. 241 622 ? 1994 JMOBAK UK 0022-2836 0070 ? ? ? 2 'Crystal Structure of Peptide-N(4)-(N-Acetyl-Beta-D-Glucosaminyl) Asparagine Amidase at 2.2 Angstroms Resolution' Biochemistry 33 11699 ? 1994 BICHAW US 0006-2960 0033 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kuhn, P.' 1 ? primary 'Guan, C.' 2 ? primary 'Cui, T.' 3 ? primary 'Tarentino, A.L.' 4 ? primary 'Plummer Jr., T.H.' 5 ? primary 'Van Roey, P.' 6 ? 1 'Kuhn, P.' 7 ? 1 'Tarentino, A.L.' 8 ? 1 'Plummer Junior, T.H.' 9 ? 1 'Van Roey, P.' 10 ? 2 'Kuhn, P.' 11 ? 2 'Tarentino, A.L.' 12 ? 2 'Plummer Junior, T.H.' 13 ? 2 'Van Roey, P.' 14 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'PEPTIDE-N(4)-(N-ACETYL-BETA-D-GLUCOSAMINYL)ASPARAGINE AMIDASE F' 34815.852 1 3.5.1.52 ? ? ? 2 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose' 424.401 1 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 4 water nat water 18.015 264 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PNGASE F' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;APADNTVNIKTFDKVKNAFGDGLSQSAEGTFTFPADVTTVKTIKMFIKNECPNKTCDEWDRYANVYVKNKTTGEWYEIGR FITPYWVGTEKLPRGLEIDVTDFKSLLSGNTELKIYTETWLAKGREYSVDFDIVYGTPDYKYSAVVPVIQYNKSSIDGVP YGKAHTLGLKKNIQLPTNTEKAYLRTTISGWGHAKPYDAGSRGCAEWCFRTHTIAINNANTFQHQLGALGCSANPINNQS PGNWAPDRAGWCPGMAVPTRIDVLNNSLTGSTFSYEYKFQSWTNNGTNGDAFYAISSFVIAKSNTPISAPVVTN ; _entity_poly.pdbx_seq_one_letter_code_can ;APADNTVNIKTFDKVKNAFGDGLSQSAEGTFTFPADVTTVKTIKMFIKNECPNKTCDEWDRYANVYVKNKTTGEWYEIGR FITPYWVGTEKLPRGLEIDVTDFKSLLSGNTELKIYTETWLAKGREYSVDFDIVYGTPDYKYSAVVPVIQYNKSSIDGVP YGKAHTLGLKKNIQLPTNTEKAYLRTTISGWGHAKPYDAGSRGCAEWCFRTHTIAINNANTFQHQLGALGCSANPINNQS PGNWAPDRAGWCPGMAVPTRIDVLNNSLTGSTFSYEYKFQSWTNNGTNGDAFYAISSFVIAKSNTPISAPVVTN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'SULFATE ION' SO4 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 PRO n 1 3 ALA n 1 4 ASP n 1 5 ASN n 1 6 THR n 1 7 VAL n 1 8 ASN n 1 9 ILE n 1 10 LYS n 1 11 THR n 1 12 PHE n 1 13 ASP n 1 14 LYS n 1 15 VAL n 1 16 LYS n 1 17 ASN n 1 18 ALA n 1 19 PHE n 1 20 GLY n 1 21 ASP n 1 22 GLY n 1 23 LEU n 1 24 SER n 1 25 GLN n 1 26 SER n 1 27 ALA n 1 28 GLU n 1 29 GLY n 1 30 THR n 1 31 PHE n 1 32 THR n 1 33 PHE n 1 34 PRO n 1 35 ALA n 1 36 ASP n 1 37 VAL n 1 38 THR n 1 39 THR n 1 40 VAL n 1 41 LYS n 1 42 THR n 1 43 ILE n 1 44 LYS n 1 45 MET n 1 46 PHE n 1 47 ILE n 1 48 LYS n 1 49 ASN n 1 50 GLU n 1 51 CYS n 1 52 PRO n 1 53 ASN n 1 54 LYS n 1 55 THR n 1 56 CYS n 1 57 ASP n 1 58 GLU n 1 59 TRP n 1 60 ASP n 1 61 ARG n 1 62 TYR n 1 63 ALA n 1 64 ASN n 1 65 VAL n 1 66 TYR n 1 67 VAL n 1 68 LYS n 1 69 ASN n 1 70 LYS n 1 71 THR n 1 72 THR n 1 73 GLY n 1 74 GLU n 1 75 TRP n 1 76 TYR n 1 77 GLU n 1 78 ILE n 1 79 GLY n 1 80 ARG n 1 81 PHE n 1 82 ILE n 1 83 THR n 1 84 PRO n 1 85 TYR n 1 86 TRP n 1 87 VAL n 1 88 GLY n 1 89 THR n 1 90 GLU n 1 91 LYS n 1 92 LEU n 1 93 PRO n 1 94 ARG n 1 95 GLY n 1 96 LEU n 1 97 GLU n 1 98 ILE n 1 99 ASP n 1 100 VAL n 1 101 THR n 1 102 ASP n 1 103 PHE n 1 104 LYS n 1 105 SER n 1 106 LEU n 1 107 LEU n 1 108 SER n 1 109 GLY n 1 110 ASN n 1 111 THR n 1 112 GLU n 1 113 LEU n 1 114 LYS n 1 115 ILE n 1 116 TYR n 1 117 THR n 1 118 GLU n 1 119 THR n 1 120 TRP n 1 121 LEU n 1 122 ALA n 1 123 LYS n 1 124 GLY n 1 125 ARG n 1 126 GLU n 1 127 TYR n 1 128 SER n 1 129 VAL n 1 130 ASP n 1 131 PHE n 1 132 ASP n 1 133 ILE n 1 134 VAL n 1 135 TYR n 1 136 GLY n 1 137 THR n 1 138 PRO n 1 139 ASP n 1 140 TYR n 1 141 LYS n 1 142 TYR n 1 143 SER n 1 144 ALA n 1 145 VAL n 1 146 VAL n 1 147 PRO n 1 148 VAL n 1 149 ILE n 1 150 GLN n 1 151 TYR n 1 152 ASN n 1 153 LYS n 1 154 SER n 1 155 SER n 1 156 ILE n 1 157 ASP n 1 158 GLY n 1 159 VAL n 1 160 PRO n 1 161 TYR n 1 162 GLY n 1 163 LYS n 1 164 ALA n 1 165 HIS n 1 166 THR n 1 167 LEU n 1 168 GLY n 1 169 LEU n 1 170 LYS n 1 171 LYS n 1 172 ASN n 1 173 ILE n 1 174 GLN n 1 175 LEU n 1 176 PRO n 1 177 THR n 1 178 ASN n 1 179 THR n 1 180 GLU n 1 181 LYS n 1 182 ALA n 1 183 TYR n 1 184 LEU n 1 185 ARG n 1 186 THR n 1 187 THR n 1 188 ILE n 1 189 SER n 1 190 GLY n 1 191 TRP n 1 192 GLY n 1 193 HIS n 1 194 ALA n 1 195 LYS n 1 196 PRO n 1 197 TYR n 1 198 ASP n 1 199 ALA n 1 200 GLY n 1 201 SER n 1 202 ARG n 1 203 GLY n 1 204 CYS n 1 205 ALA n 1 206 GLU n 1 207 TRP n 1 208 CYS n 1 209 PHE n 1 210 ARG n 1 211 THR n 1 212 HIS n 1 213 THR n 1 214 ILE n 1 215 ALA n 1 216 ILE n 1 217 ASN n 1 218 ASN n 1 219 ALA n 1 220 ASN n 1 221 THR n 1 222 PHE n 1 223 GLN n 1 224 HIS n 1 225 GLN n 1 226 LEU n 1 227 GLY n 1 228 ALA n 1 229 LEU n 1 230 GLY n 1 231 CYS n 1 232 SER n 1 233 ALA n 1 234 ASN n 1 235 PRO n 1 236 ILE n 1 237 ASN n 1 238 ASN n 1 239 GLN n 1 240 SER n 1 241 PRO n 1 242 GLY n 1 243 ASN n 1 244 TRP n 1 245 ALA n 1 246 PRO n 1 247 ASP n 1 248 ARG n 1 249 ALA n 1 250 GLY n 1 251 TRP n 1 252 CYS n 1 253 PRO n 1 254 GLY n 1 255 MET n 1 256 ALA n 1 257 VAL n 1 258 PRO n 1 259 THR n 1 260 ARG n 1 261 ILE n 1 262 ASP n 1 263 VAL n 1 264 LEU n 1 265 ASN n 1 266 ASN n 1 267 SER n 1 268 LEU n 1 269 THR n 1 270 GLY n 1 271 SER n 1 272 THR n 1 273 PHE n 1 274 SER n 1 275 TYR n 1 276 GLU n 1 277 TYR n 1 278 LYS n 1 279 PHE n 1 280 GLN n 1 281 SER n 1 282 TRP n 1 283 THR n 1 284 ASN n 1 285 ASN n 1 286 GLY n 1 287 THR n 1 288 ASN n 1 289 GLY n 1 290 ASP n 1 291 ALA n 1 292 PHE n 1 293 TYR n 1 294 ALA n 1 295 ILE n 1 296 SER n 1 297 SER n 1 298 PHE n 1 299 VAL n 1 300 ILE n 1 301 ALA n 1 302 LYS n 1 303 SER n 1 304 ASN n 1 305 THR n 1 306 PRO n 1 307 ILE n 1 308 SER n 1 309 ALA n 1 310 PRO n 1 311 VAL n 1 312 VAL n 1 313 THR n 1 314 ASN n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Elizabethkingia meningoseptica' _entity_src_nat.pdbx_ncbi_taxonomy_id 238 _entity_src_nat.genus Elizabethkingia _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGlcpNAcb1-4DGlcpNAca1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/2,2,1/[a2122h-1a_1-5_2*NCC/3=O][a2122h-1b_1-5_2*NCC/3=O]/1-2/a4-b1' WURCS PDB2Glycan 1.1.0 3 2 '[][a-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 NDG _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 NDG 'D-saccharide, alpha linking' . 2-acetamido-2-deoxy-alpha-D-glucopyranose ;N-acetyl-alpha-D-glucosamine; 2-acetamido-2-deoxy-alpha-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc NDG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAca NDG 'COMMON NAME' GMML 1.0 N-acetyl-a-D-glucopyranosamine NDG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-GlcpNAc NDG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 PRO 2 2 2 PRO PRO A . n A 1 3 ALA 3 3 3 ALA ALA A . n A 1 4 ASP 4 4 4 ASP ASP A . n A 1 5 ASN 5 5 5 ASN ASN A . n A 1 6 THR 6 6 6 THR THR A . n A 1 7 VAL 7 7 7 VAL VAL A . n A 1 8 ASN 8 8 8 ASN ASN A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 THR 11 11 11 THR THR A . n A 1 12 PHE 12 12 12 PHE PHE A . n A 1 13 ASP 13 13 13 ASP ASP A . n A 1 14 LYS 14 14 14 LYS LYS A . n A 1 15 VAL 15 15 15 VAL VAL A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 ASN 17 17 17 ASN ASN A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 PHE 19 19 19 PHE PHE A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 GLN 25 25 25 GLN GLN A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 GLU 28 28 28 GLU GLU A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 THR 30 30 30 THR THR A . n A 1 31 PHE 31 31 31 PHE PHE A . n A 1 32 THR 32 32 32 THR THR A . n A 1 33 PHE 33 33 33 PHE PHE A . n A 1 34 PRO 34 34 34 PRO PRO A . n A 1 35 ALA 35 35 35 ALA ALA A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 THR 38 38 38 THR THR A . n A 1 39 THR 39 39 39 THR THR A . n A 1 40 VAL 40 40 40 VAL VAL A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 THR 42 42 42 THR THR A . n A 1 43 ILE 43 43 43 ILE ILE A . n A 1 44 LYS 44 44 44 LYS LYS A . n A 1 45 MET 45 45 45 MET MET A . n A 1 46 PHE 46 46 46 PHE PHE A . n A 1 47 ILE 47 47 47 ILE ILE A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 ASN 49 49 49 ASN ASN A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 CYS 51 51 51 CYS CYS A . n A 1 52 PRO 52 52 52 PRO PRO A . n A 1 53 ASN 53 53 53 ASN ASN A . n A 1 54 LYS 54 54 54 LYS LYS A . n A 1 55 THR 55 55 55 THR THR A . n A 1 56 CYS 56 56 56 CYS CYS A . n A 1 57 ASP 57 57 57 ASP ASP A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 TRP 59 59 59 TRP TRP A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 ARG 61 61 61 ARG ARG A . n A 1 62 TYR 62 62 62 TYR TYR A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 ASN 64 64 64 ASN ASN A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 TYR 66 66 66 TYR TYR A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 LYS 68 68 68 LYS LYS A . n A 1 69 ASN 69 69 69 ASN ASN A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 THR 71 71 71 THR THR A . n A 1 72 THR 72 72 72 THR THR A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 TRP 75 75 75 TRP TRP A . n A 1 76 TYR 76 76 76 TYR TYR A . n A 1 77 GLU 77 77 77 GLU GLU A . n A 1 78 ILE 78 78 78 ILE ILE A . n A 1 79 GLY 79 79 79 GLY GLY A . n A 1 80 ARG 80 80 80 ARG ARG A . n A 1 81 PHE 81 81 81 PHE PHE A . n A 1 82 ILE 82 82 82 ILE ILE A . n A 1 83 THR 83 83 83 THR THR A . n A 1 84 PRO 84 84 84 PRO PRO A . n A 1 85 TYR 85 85 85 TYR TYR A . n A 1 86 TRP 86 86 86 TRP TRP A . n A 1 87 VAL 87 87 87 VAL VAL A . n A 1 88 GLY 88 88 88 GLY GLY A . n A 1 89 THR 89 89 89 THR THR A . n A 1 90 GLU 90 90 90 GLU GLU A . n A 1 91 LYS 91 91 91 LYS LYS A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 PRO 93 93 93 PRO PRO A . n A 1 94 ARG 94 94 94 ARG ARG A . n A 1 95 GLY 95 95 95 GLY GLY A . n A 1 96 LEU 96 96 96 LEU LEU A . n A 1 97 GLU 97 97 97 GLU GLU A . n A 1 98 ILE 98 98 98 ILE ILE A . n A 1 99 ASP 99 99 99 ASP ASP A . n A 1 100 VAL 100 100 100 VAL VAL A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 ASP 102 102 102 ASP ASP A . n A 1 103 PHE 103 103 103 PHE PHE A . n A 1 104 LYS 104 104 104 LYS LYS A . n A 1 105 SER 105 105 105 SER SER A . n A 1 106 LEU 106 106 106 LEU LEU A . n A 1 107 LEU 107 107 107 LEU LEU A . n A 1 108 SER 108 108 108 SER SER A . n A 1 109 GLY 109 109 109 GLY GLY A . n A 1 110 ASN 110 110 110 ASN ASN A . n A 1 111 THR 111 111 111 THR THR A . n A 1 112 GLU 112 112 112 GLU GLU A . n A 1 113 LEU 113 113 113 LEU LEU A . n A 1 114 LYS 114 114 114 LYS LYS A . n A 1 115 ILE 115 115 115 ILE ILE A . n A 1 116 TYR 116 116 116 TYR TYR A . n A 1 117 THR 117 117 117 THR THR A . n A 1 118 GLU 118 118 118 GLU GLU A . n A 1 119 THR 119 119 119 THR THR A . n A 1 120 TRP 120 120 120 TRP TRP A . n A 1 121 LEU 121 121 121 LEU LEU A . n A 1 122 ALA 122 122 122 ALA ALA A . n A 1 123 LYS 123 123 123 LYS LYS A . n A 1 124 GLY 124 124 124 GLY GLY A . n A 1 125 ARG 125 125 125 ARG ARG A . n A 1 126 GLU 126 126 126 GLU GLU A . n A 1 127 TYR 127 127 127 TYR TYR A . n A 1 128 SER 128 128 128 SER SER A . n A 1 129 VAL 129 129 129 VAL VAL A . n A 1 130 ASP 130 130 130 ASP ASP A . n A 1 131 PHE 131 131 131 PHE PHE A . n A 1 132 ASP 132 132 132 ASP ASP A . n A 1 133 ILE 133 133 133 ILE ILE A . n A 1 134 VAL 134 134 134 VAL VAL A . n A 1 135 TYR 135 135 135 TYR TYR A . n A 1 136 GLY 136 136 136 GLY GLY A . n A 1 137 THR 137 137 137 THR THR A . n A 1 138 PRO 138 138 138 PRO PRO A . n A 1 139 ASP 139 139 139 ASP ASP A . n A 1 140 TYR 140 140 140 TYR TYR A . n A 1 141 LYS 141 141 141 LYS LYS A . n A 1 142 TYR 142 142 142 TYR TYR A . n A 1 143 SER 143 143 143 SER SER A . n A 1 144 ALA 144 144 144 ALA ALA A . n A 1 145 VAL 145 145 145 VAL VAL A . n A 1 146 VAL 146 146 146 VAL VAL A . n A 1 147 PRO 147 147 147 PRO PRO A . n A 1 148 VAL 148 148 148 VAL VAL A . n A 1 149 ILE 149 149 149 ILE ILE A . n A 1 150 GLN 150 150 150 GLN GLN A . n A 1 151 TYR 151 151 151 TYR TYR A . n A 1 152 ASN 152 152 152 ASN ASN A . n A 1 153 LYS 153 153 153 LYS LYS A . n A 1 154 SER 154 154 154 SER SER A . n A 1 155 SER 155 155 155 SER SER A . n A 1 156 ILE 156 156 156 ILE ILE A . n A 1 157 ASP 157 157 157 ASP ASP A . n A 1 158 GLY 158 158 158 GLY GLY A . n A 1 159 VAL 159 159 159 VAL VAL A . n A 1 160 PRO 160 160 160 PRO PRO A . n A 1 161 TYR 161 161 161 TYR TYR A . n A 1 162 GLY 162 162 162 GLY GLY A . n A 1 163 LYS 163 163 163 LYS LYS A . n A 1 164 ALA 164 164 164 ALA ALA A . n A 1 165 HIS 165 165 165 HIS HIS A . n A 1 166 THR 166 166 166 THR THR A . n A 1 167 LEU 167 167 167 LEU LEU A . n A 1 168 GLY 168 168 168 GLY GLY A . n A 1 169 LEU 169 169 169 LEU LEU A . n A 1 170 LYS 170 170 170 LYS LYS A . n A 1 171 LYS 171 171 171 LYS LYS A . n A 1 172 ASN 172 172 172 ASN ASN A . n A 1 173 ILE 173 173 173 ILE ILE A . n A 1 174 GLN 174 174 174 GLN GLN A . n A 1 175 LEU 175 175 175 LEU LEU A . n A 1 176 PRO 176 176 176 PRO PRO A . n A 1 177 THR 177 177 177 THR THR A . n A 1 178 ASN 178 178 178 ASN ASN A . n A 1 179 THR 179 179 179 THR THR A . n A 1 180 GLU 180 180 180 GLU GLU A . n A 1 181 LYS 181 181 181 LYS LYS A . n A 1 182 ALA 182 182 182 ALA ALA A . n A 1 183 TYR 183 183 183 TYR TYR A . n A 1 184 LEU 184 184 184 LEU LEU A . n A 1 185 ARG 185 185 185 ARG ARG A . n A 1 186 THR 186 186 186 THR THR A . n A 1 187 THR 187 187 187 THR THR A . n A 1 188 ILE 188 188 188 ILE ILE A . n A 1 189 SER 189 189 189 SER SER A . n A 1 190 GLY 190 190 190 GLY GLY A . n A 1 191 TRP 191 191 191 TRP TRP A . n A 1 192 GLY 192 192 192 GLY GLY A . n A 1 193 HIS 193 193 193 HIS HIS A . n A 1 194 ALA 194 194 194 ALA ALA A . n A 1 195 LYS 195 195 195 LYS LYS A . n A 1 196 PRO 196 196 196 PRO PRO A . n A 1 197 TYR 197 197 197 TYR TYR A . n A 1 198 ASP 198 198 198 ASP ASP A . n A 1 199 ALA 199 199 199 ALA ALA A . n A 1 200 GLY 200 200 200 GLY GLY A . n A 1 201 SER 201 201 201 SER SER A . n A 1 202 ARG 202 202 202 ARG ARG A . n A 1 203 GLY 203 203 203 GLY GLY A . n A 1 204 CYS 204 204 204 CYS CYS A . n A 1 205 ALA 205 205 205 ALA ALA A . n A 1 206 GLU 206 206 206 GLU GLU A . n A 1 207 TRP 207 207 207 TRP TRP A . n A 1 208 CYS 208 208 208 CYS CYS A . n A 1 209 PHE 209 209 209 PHE PHE A . n A 1 210 ARG 210 210 210 ARG ARG A . n A 1 211 THR 211 211 211 THR THR A . n A 1 212 HIS 212 212 212 HIS HIS A . n A 1 213 THR 213 213 213 THR THR A . n A 1 214 ILE 214 214 214 ILE ILE A . n A 1 215 ALA 215 215 215 ALA ALA A . n A 1 216 ILE 216 216 216 ILE ILE A . n A 1 217 ASN 217 217 217 ASN ASN A . n A 1 218 ASN 218 218 218 ASN ASN A . n A 1 219 ALA 219 219 219 ALA ALA A . n A 1 220 ASN 220 220 220 ASN ASN A . n A 1 221 THR 221 221 221 THR THR A . n A 1 222 PHE 222 222 222 PHE PHE A . n A 1 223 GLN 223 223 223 GLN GLN A . n A 1 224 HIS 224 224 224 HIS HIS A . n A 1 225 GLN 225 225 225 GLN GLN A . n A 1 226 LEU 226 226 226 LEU LEU A . n A 1 227 GLY 227 227 227 GLY GLY A . n A 1 228 ALA 228 228 228 ALA ALA A . n A 1 229 LEU 229 229 229 LEU LEU A . n A 1 230 GLY 230 230 230 GLY GLY A . n A 1 231 CYS 231 231 231 CYS CYS A . n A 1 232 SER 232 232 232 SER SER A . n A 1 233 ALA 233 233 233 ALA ALA A . n A 1 234 ASN 234 234 234 ASN ASN A . n A 1 235 PRO 235 235 235 PRO PRO A . n A 1 236 ILE 236 236 236 ILE ILE A . n A 1 237 ASN 237 237 237 ASN ASN A . n A 1 238 ASN 238 238 238 ASN ASN A . n A 1 239 GLN 239 239 239 GLN GLN A . n A 1 240 SER 240 240 240 SER SER A . n A 1 241 PRO 241 241 241 PRO PRO A . n A 1 242 GLY 242 242 242 GLY GLY A . n A 1 243 ASN 243 243 243 ASN ASN A . n A 1 244 TRP 244 244 244 TRP TRP A . n A 1 245 ALA 245 245 245 ALA ALA A . n A 1 246 PRO 246 246 246 PRO PRO A . n A 1 247 ASP 247 247 247 ASP ASP A . n A 1 248 ARG 248 248 248 ARG ARG A . n A 1 249 ALA 249 249 249 ALA ALA A . n A 1 250 GLY 250 250 250 GLY GLY A . n A 1 251 TRP 251 251 251 TRP TRP A . n A 1 252 CYS 252 252 252 CYS CYS A . n A 1 253 PRO 253 253 253 PRO PRO A . n A 1 254 GLY 254 254 254 GLY GLY A . n A 1 255 MET 255 255 255 MET MET A . n A 1 256 ALA 256 256 256 ALA ALA A . n A 1 257 VAL 257 257 257 VAL VAL A . n A 1 258 PRO 258 258 258 PRO PRO A . n A 1 259 THR 259 259 259 THR THR A . n A 1 260 ARG 260 260 260 ARG ARG A . n A 1 261 ILE 261 261 261 ILE ILE A . n A 1 262 ASP 262 262 262 ASP ASP A . n A 1 263 VAL 263 263 263 VAL VAL A . n A 1 264 LEU 264 264 264 LEU LEU A . n A 1 265 ASN 265 265 265 ASN ASN A . n A 1 266 ASN 266 266 266 ASN ASN A . n A 1 267 SER 267 267 267 SER SER A . n A 1 268 LEU 268 268 268 LEU LEU A . n A 1 269 THR 269 269 269 THR THR A . n A 1 270 GLY 270 270 270 GLY GLY A . n A 1 271 SER 271 271 271 SER SER A . n A 1 272 THR 272 272 272 THR THR A . n A 1 273 PHE 273 273 273 PHE PHE A . n A 1 274 SER 274 274 274 SER SER A . n A 1 275 TYR 275 275 275 TYR TYR A . n A 1 276 GLU 276 276 276 GLU GLU A . n A 1 277 TYR 277 277 277 TYR TYR A . n A 1 278 LYS 278 278 278 LYS LYS A . n A 1 279 PHE 279 279 279 PHE PHE A . n A 1 280 GLN 280 280 280 GLN GLN A . n A 1 281 SER 281 281 281 SER SER A . n A 1 282 TRP 282 282 282 TRP TRP A . n A 1 283 THR 283 283 283 THR THR A . n A 1 284 ASN 284 284 284 ASN ASN A . n A 1 285 ASN 285 285 285 ASN ASN A . n A 1 286 GLY 286 286 286 GLY GLY A . n A 1 287 THR 287 287 287 THR THR A . n A 1 288 ASN 288 288 288 ASN ASN A . n A 1 289 GLY 289 289 289 GLY GLY A . n A 1 290 ASP 290 290 290 ASP ASP A . n A 1 291 ALA 291 291 291 ALA ALA A . n A 1 292 PHE 292 292 292 PHE PHE A . n A 1 293 TYR 293 293 293 TYR TYR A . n A 1 294 ALA 294 294 294 ALA ALA A . n A 1 295 ILE 295 295 295 ILE ILE A . n A 1 296 SER 296 296 296 SER SER A . n A 1 297 SER 297 297 297 SER SER A . n A 1 298 PHE 298 298 298 PHE PHE A . n A 1 299 VAL 299 299 299 VAL VAL A . n A 1 300 ILE 300 300 300 ILE ILE A . n A 1 301 ALA 301 301 301 ALA ALA A . n A 1 302 LYS 302 302 302 LYS LYS A . n A 1 303 SER 303 303 303 SER SER A . n A 1 304 ASN 304 304 304 ASN ASN A . n A 1 305 THR 305 305 305 THR THR A . n A 1 306 PRO 306 306 306 PRO PRO A . n A 1 307 ILE 307 307 307 ILE ILE A . n A 1 308 SER 308 308 308 SER SER A . n A 1 309 ALA 309 309 309 ALA ALA A . n A 1 310 PRO 310 310 310 PRO PRO A . n A 1 311 VAL 311 311 311 VAL VAL A . n A 1 312 VAL 312 312 312 VAL VAL A . n A 1 313 THR 313 313 313 THR THR A . n A 1 314 ASN 314 314 314 ASN ASN A . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NDG 1 B NDG 1 ? NAG 431 n B 2 NAG 2 B NAG 2 ? NAG 432 n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 1 500 500 SO4 SO4 A . D 4 HOH 1 501 3 HOH HOH A . D 4 HOH 2 502 11 HOH HOH A . D 4 HOH 3 503 12 HOH HOH A . D 4 HOH 4 504 14 HOH HOH A . D 4 HOH 5 505 15 HOH HOH A . D 4 HOH 6 506 17 HOH HOH A . D 4 HOH 7 507 18 HOH HOH A . D 4 HOH 8 508 19 HOH HOH A . D 4 HOH 9 509 22 HOH HOH A . D 4 HOH 10 510 23 HOH HOH A . D 4 HOH 11 511 24 HOH HOH A . D 4 HOH 12 512 25 HOH HOH A . D 4 HOH 13 513 27 HOH HOH A . D 4 HOH 14 514 32 HOH HOH A . D 4 HOH 15 515 35 HOH HOH A . D 4 HOH 16 516 36 HOH HOH A . D 4 HOH 17 517 41 HOH HOH A . D 4 HOH 18 518 42 HOH HOH A . D 4 HOH 19 519 43 HOH HOH A . D 4 HOH 20 520 44 HOH HOH A . D 4 HOH 21 521 45 HOH HOH A . D 4 HOH 22 522 46 HOH HOH A . D 4 HOH 23 523 48 HOH HOH A . D 4 HOH 24 524 49 HOH HOH A . D 4 HOH 25 525 50 HOH HOH A . D 4 HOH 26 526 551 HOH HOH A . D 4 HOH 27 527 52 HOH HOH A . D 4 HOH 28 528 53 HOH HOH A . D 4 HOH 29 529 54 HOH HOH A . D 4 HOH 30 530 55 HOH HOH A . D 4 HOH 31 531 58 HOH HOH A . D 4 HOH 32 532 59 HOH HOH A . D 4 HOH 33 533 60 HOH HOH A . D 4 HOH 34 534 61 HOH HOH A . D 4 HOH 35 535 62 HOH HOH A . D 4 HOH 36 536 64 HOH HOH A . D 4 HOH 37 537 66 HOH HOH A . D 4 HOH 38 538 67 HOH HOH A . D 4 HOH 39 539 68 HOH HOH A . D 4 HOH 40 540 69 HOH HOH A . D 4 HOH 41 541 70 HOH HOH A . D 4 HOH 42 542 73 HOH HOH A . D 4 HOH 43 543 74 HOH HOH A . D 4 HOH 44 544 75 HOH HOH A . D 4 HOH 45 545 77 HOH HOH A . D 4 HOH 46 546 78 HOH HOH A . D 4 HOH 47 547 80 HOH HOH A . D 4 HOH 48 548 82 HOH HOH A . D 4 HOH 49 549 84 HOH HOH A . D 4 HOH 50 550 85 HOH HOH A . D 4 HOH 51 551 86 HOH HOH A . D 4 HOH 52 552 87 HOH HOH A . D 4 HOH 53 553 88 HOH HOH A . D 4 HOH 54 554 89 HOH HOH A . D 4 HOH 55 555 90 HOH HOH A . D 4 HOH 56 556 91 HOH HOH A . D 4 HOH 57 557 92 HOH HOH A . D 4 HOH 58 558 93 HOH HOH A . D 4 HOH 59 559 94 HOH HOH A . D 4 HOH 60 560 95 HOH HOH A . D 4 HOH 61 561 97 HOH HOH A . D 4 HOH 62 562 98 HOH HOH A . D 4 HOH 63 563 99 HOH HOH A . D 4 HOH 64 564 100 HOH HOH A . D 4 HOH 65 565 101 HOH HOH A . D 4 HOH 66 566 103 HOH HOH A . D 4 HOH 67 567 105 HOH HOH A . D 4 HOH 68 568 106 HOH HOH A . D 4 HOH 69 569 108 HOH HOH A . D 4 HOH 70 570 126 HOH HOH A . D 4 HOH 71 571 138 HOH HOH A . D 4 HOH 72 572 141 HOH HOH A . D 4 HOH 73 573 146 HOH HOH A . D 4 HOH 74 574 149 HOH HOH A . D 4 HOH 75 575 154 HOH HOH A . D 4 HOH 76 576 155 HOH HOH A . D 4 HOH 77 577 157 HOH HOH A . D 4 HOH 78 578 158 HOH HOH A . D 4 HOH 79 579 177 HOH HOH A . D 4 HOH 80 580 182 HOH HOH A . D 4 HOH 81 581 183 HOH HOH A . D 4 HOH 82 582 196 HOH HOH A . D 4 HOH 83 583 226 HOH HOH A . D 4 HOH 84 584 261 HOH HOH A . D 4 HOH 85 585 263 HOH HOH A . D 4 HOH 86 586 268 HOH HOH A . D 4 HOH 87 587 269 HOH HOH A . D 4 HOH 88 588 270 HOH HOH A . D 4 HOH 89 589 271 HOH HOH A . D 4 HOH 90 590 272 HOH HOH A . D 4 HOH 91 591 273 HOH HOH A . D 4 HOH 92 592 274 HOH HOH A . D 4 HOH 93 593 275 HOH HOH A . D 4 HOH 94 594 276 HOH HOH A . D 4 HOH 95 595 277 HOH HOH A . D 4 HOH 96 596 278 HOH HOH A . D 4 HOH 97 597 279 HOH HOH A . D 4 HOH 98 598 280 HOH HOH A . D 4 HOH 99 599 281 HOH HOH A . D 4 HOH 100 600 282 HOH HOH A . D 4 HOH 101 601 283 HOH HOH A . D 4 HOH 102 602 284 HOH HOH A . D 4 HOH 103 603 285 HOH HOH A . D 4 HOH 104 604 286 HOH HOH A . D 4 HOH 105 605 287 HOH HOH A . D 4 HOH 106 606 289 HOH HOH A . D 4 HOH 107 607 290 HOH HOH A . D 4 HOH 108 608 291 HOH HOH A . D 4 HOH 109 609 292 HOH HOH A . D 4 HOH 110 610 293 HOH HOH A . D 4 HOH 111 611 294 HOH HOH A . D 4 HOH 112 612 296 HOH HOH A . D 4 HOH 113 613 301 HOH HOH A . D 4 HOH 114 614 302 HOH HOH A . D 4 HOH 115 615 303 HOH HOH A . D 4 HOH 116 616 304 HOH HOH A . D 4 HOH 117 617 305 HOH HOH A . D 4 HOH 118 618 306 HOH HOH A . D 4 HOH 119 619 307 HOH HOH A . D 4 HOH 120 620 308 HOH HOH A . D 4 HOH 121 621 309 HOH HOH A . D 4 HOH 122 622 310 HOH HOH A . D 4 HOH 123 623 311 HOH HOH A . D 4 HOH 124 624 312 HOH HOH A . D 4 HOH 125 625 313 HOH HOH A . D 4 HOH 126 626 314 HOH HOH A . D 4 HOH 127 627 316 HOH HOH A . D 4 HOH 128 628 317 HOH HOH A . D 4 HOH 129 629 321 HOH HOH A . D 4 HOH 130 630 322 HOH HOH A . D 4 HOH 131 631 323 HOH HOH A . D 4 HOH 132 632 324 HOH HOH A . D 4 HOH 133 633 325 HOH HOH A . D 4 HOH 134 634 326 HOH HOH A . D 4 HOH 135 635 327 HOH HOH A . D 4 HOH 136 636 328 HOH HOH A . D 4 HOH 137 637 329 HOH HOH A . D 4 HOH 138 638 330 HOH HOH A . D 4 HOH 139 639 331 HOH HOH A . D 4 HOH 140 640 334 HOH HOH A . D 4 HOH 141 641 335 HOH HOH A . D 4 HOH 142 642 336 HOH HOH A . D 4 HOH 143 643 337 HOH HOH A . D 4 HOH 144 644 338 HOH HOH A . D 4 HOH 145 645 339 HOH HOH A . D 4 HOH 146 646 340 HOH HOH A . D 4 HOH 147 647 341 HOH HOH A . D 4 HOH 148 648 342 HOH HOH A . D 4 HOH 149 649 343 HOH HOH A . D 4 HOH 150 650 344 HOH HOH A . D 4 HOH 151 651 345 HOH HOH A . D 4 HOH 152 652 346 HOH HOH A . D 4 HOH 153 653 347 HOH HOH A . D 4 HOH 154 654 348 HOH HOH A . D 4 HOH 155 655 349 HOH HOH A . D 4 HOH 156 656 350 HOH HOH A . D 4 HOH 157 657 351 HOH HOH A . D 4 HOH 158 658 352 HOH HOH A . D 4 HOH 159 659 353 HOH HOH A . D 4 HOH 160 660 354 HOH HOH A . D 4 HOH 161 661 355 HOH HOH A . D 4 HOH 162 662 356 HOH HOH A . D 4 HOH 163 663 357 HOH HOH A . D 4 HOH 164 664 358 HOH HOH A . D 4 HOH 165 665 359 HOH HOH A . D 4 HOH 166 666 360 HOH HOH A . D 4 HOH 167 667 361 HOH HOH A . D 4 HOH 168 668 362 HOH HOH A . D 4 HOH 169 669 363 HOH HOH A . D 4 HOH 170 670 364 HOH HOH A . D 4 HOH 171 671 365 HOH HOH A . D 4 HOH 172 672 366 HOH HOH A . D 4 HOH 173 673 367 HOH HOH A . D 4 HOH 174 674 368 HOH HOH A . D 4 HOH 175 675 369 HOH HOH A . D 4 HOH 176 676 370 HOH HOH A . D 4 HOH 177 677 371 HOH HOH A . D 4 HOH 178 678 372 HOH HOH A . D 4 HOH 179 679 373 HOH HOH A . D 4 HOH 180 680 374 HOH HOH A . D 4 HOH 181 681 375 HOH HOH A . D 4 HOH 182 682 376 HOH HOH A . D 4 HOH 183 683 377 HOH HOH A . D 4 HOH 184 684 378 HOH HOH A . D 4 HOH 185 685 379 HOH HOH A . D 4 HOH 186 686 380 HOH HOH A . D 4 HOH 187 687 381 HOH HOH A . D 4 HOH 188 688 382 HOH HOH A . D 4 HOH 189 689 383 HOH HOH A . D 4 HOH 190 690 388 HOH HOH A . D 4 HOH 191 691 389 HOH HOH A . D 4 HOH 192 692 390 HOH HOH A . D 4 HOH 193 693 391 HOH HOH A . D 4 HOH 194 694 392 HOH HOH A . D 4 HOH 195 695 393 HOH HOH A . D 4 HOH 196 696 394 HOH HOH A . D 4 HOH 197 697 395 HOH HOH A . D 4 HOH 198 698 396 HOH HOH A . D 4 HOH 199 699 397 HOH HOH A . D 4 HOH 200 700 398 HOH HOH A . D 4 HOH 201 701 399 HOH HOH A . D 4 HOH 202 702 400 HOH HOH A . D 4 HOH 203 703 401 HOH HOH A . D 4 HOH 204 704 402 HOH HOH A . D 4 HOH 205 705 403 HOH HOH A . D 4 HOH 206 706 404 HOH HOH A . D 4 HOH 207 707 405 HOH HOH A . D 4 HOH 208 708 406 HOH HOH A . D 4 HOH 209 709 407 HOH HOH A . D 4 HOH 210 710 408 HOH HOH A . D 4 HOH 211 711 409 HOH HOH A . D 4 HOH 212 712 410 HOH HOH A . D 4 HOH 213 713 411 HOH HOH A . D 4 HOH 214 714 412 HOH HOH A . D 4 HOH 215 715 413 HOH HOH A . D 4 HOH 216 716 414 HOH HOH A . D 4 HOH 217 717 415 HOH HOH A . D 4 HOH 218 718 416 HOH HOH A . D 4 HOH 219 719 417 HOH HOH A . D 4 HOH 220 720 418 HOH HOH A . D 4 HOH 221 721 419 HOH HOH A . D 4 HOH 222 722 420 HOH HOH A . D 4 HOH 223 723 421 HOH HOH A . D 4 HOH 224 724 422 HOH HOH A . D 4 HOH 225 725 423 HOH HOH A . D 4 HOH 226 726 424 HOH HOH A . D 4 HOH 227 727 425 HOH HOH A . D 4 HOH 228 728 426 HOH HOH A . D 4 HOH 229 729 427 HOH HOH A . D 4 HOH 230 730 428 HOH HOH A . D 4 HOH 231 731 429 HOH HOH A . D 4 HOH 232 732 430 HOH HOH A . D 4 HOH 233 733 531 HOH HOH A . D 4 HOH 234 734 532 HOH HOH A . D 4 HOH 235 735 433 HOH HOH A . D 4 HOH 236 736 434 HOH HOH A . D 4 HOH 237 737 435 HOH HOH A . D 4 HOH 238 738 436 HOH HOH A . D 4 HOH 239 739 437 HOH HOH A . D 4 HOH 240 740 438 HOH HOH A . D 4 HOH 241 741 439 HOH HOH A . D 4 HOH 242 742 440 HOH HOH A . D 4 HOH 243 743 441 HOH HOH A . D 4 HOH 244 744 442 HOH HOH A . D 4 HOH 245 745 443 HOH HOH A . D 4 HOH 246 746 444 HOH HOH A . D 4 HOH 247 747 445 HOH HOH A . D 4 HOH 248 748 446 HOH HOH A . D 4 HOH 249 749 447 HOH HOH A . D 4 HOH 250 750 449 HOH HOH A . D 4 HOH 251 751 450 HOH HOH A . D 4 HOH 252 752 451 HOH HOH A . D 4 HOH 253 753 452 HOH HOH A . D 4 HOH 254 754 453 HOH HOH A . D 4 HOH 255 755 454 HOH HOH A . D 4 HOH 256 756 455 HOH HOH A . D 4 HOH 257 757 456 HOH HOH A . D 4 HOH 258 758 457 HOH HOH A . D 4 HOH 259 759 458 HOH HOH A . D 4 HOH 260 760 459 HOH HOH A . D 4 HOH 261 761 83 HOH HOH A . D 4 HOH 262 762 320 HOH HOH A . D 4 HOH 263 763 319 HOH HOH A . D 4 HOH 264 764 448 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 X-PLOR refinement . ? 2 X-PLOR phasing . ? 3 # _cell.entry_id 1PNF _cell.length_a 87.110 _cell.length_b 123.080 _cell.length_c 77.710 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1PNF _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 # _exptl.entry_id 1PNF _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.99 _exptl_crystal.density_percent_sol 58.86 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _reflns.entry_id 1PNF _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 35.0 _reflns.d_resolution_high 1.96 _reflns.number_obs 28801 _reflns.number_all ? _reflns.percent_possible_obs 96.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 1PNF _refine.ls_number_reflns_obs 26902 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.0 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 94.1 _refine.ls_R_factor_obs 0.197 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.197 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2458 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.number_atoms_solvent 264 _refine_hist.number_atoms_total 2756 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 10.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.010 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.67 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1PNF _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1PNF _struct.title 'PNGASE F COMPLEX WITH DI-N-ACETYLCHITOBIOSE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1PNF _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PNGF_FLAME _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P21163 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MRKLLIFSISAYLMAGIVSCKGVDSATPVTEDRLALNAVNAPADNTVNIKTFDKVKNAFGDGLSQSAEGTFTFPADVTTV KTIKMFIKNECPNKTCDEWDRYANVYVKNKTTGEWYEIGRFITPYWVGTEKLPRGLEIDVTDFKSLLSGNTELKIYTETW LAKGREYSVDFDIVYGTPDYKYSAVVPVIQYNKSSIDGVPYGKAHTLGLKKNIQLPTNTEKAYLRTTISGWGHAKPYDAG SRGCAEWCFRTHTIAINNANTFQHQLGALGCSANPINNQSPGNWAPDRAGWCPGMAVPTRIDVLNNSLTGSTFSYEYKFQ SWTNNGTNGDAFYAISSFVIAKSNTPISAPVVTN ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1PNF _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 314 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P21163 _struct_ref_seq.db_align_beg 41 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 354 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 314 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 CYS A 51 ? THR A 55 ? CYS A 51 THR A 55 5 ? 5 HELX_P HELX_P2 AA2 THR A 101 ? LYS A 104 ? THR A 101 LYS A 104 5 ? 4 HELX_P HELX_P3 AA3 SER A 154 ? GLY A 158 ? SER A 154 GLY A 158 5 ? 5 HELX_P HELX_P4 AA4 ALA A 199 ? SER A 201 ? ALA A 199 SER A 201 5 ? 3 HELX_P HELX_P5 AA5 GLY A 230 ? ASN A 234 ? GLY A 230 ASN A 234 5 ? 5 HELX_P HELX_P6 AA6 ASN A 265 ? THR A 269 ? ASN A 265 THR A 269 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 51 SG ? ? ? 1_555 A CYS 56 SG ? ? A CYS 51 A CYS 56 1_555 ? ? ? ? ? ? ? 2.016 ? ? disulf2 disulf ? ? A CYS 204 SG ? ? ? 1_555 A CYS 208 SG ? ? A CYS 204 A CYS 208 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf3 disulf ? ? A CYS 231 SG ? ? ? 1_555 A CYS 252 SG ? ? A CYS 231 A CYS 252 1_555 ? ? ? ? ? ? ? 2.044 ? ? covale1 covale both ? B NDG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NDG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.372 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 51 ? CYS A 56 ? CYS A 51 ? 1_555 CYS A 56 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 204 ? CYS A 208 ? CYS A 204 ? 1_555 CYS A 208 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS A 231 ? CYS A 252 ? CYS A 231 ? 1_555 CYS A 252 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LYS 195 A . ? LYS 195 A PRO 196 A ? PRO 196 A 1 0.06 2 CYS 204 A . ? CYS 204 A ALA 205 A ? ALA 205 A 1 0.37 3 SER 240 A . ? SER 240 A PRO 241 A ? PRO 241 A 1 0.95 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 4 ? AA3 ? 5 ? AA4 ? 3 ? AA5 ? 4 ? AA6 ? 5 ? AA7 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA6 4 5 ? anti-parallel AA7 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 6 ? LYS A 10 ? THR A 6 LYS A 10 AA1 2 ARG A 125 ? TYR A 135 ? ARG A 125 TYR A 135 AA1 3 VAL A 15 ? ASN A 17 ? VAL A 15 ASN A 17 AA2 1 THR A 6 ? LYS A 10 ? THR A 6 LYS A 10 AA2 2 ARG A 125 ? TYR A 135 ? ARG A 125 TYR A 135 AA2 3 VAL A 40 ? GLU A 50 ? VAL A 40 GLU A 50 AA2 4 LEU A 96 ? ASP A 99 ? LEU A 96 ASP A 99 AA3 1 SER A 26 ? PHE A 33 ? SER A 26 PHE A 33 AA3 2 GLY A 109 ? THR A 117 ? GLY A 109 THR A 117 AA3 3 TYR A 62 ? LYS A 68 ? TYR A 62 LYS A 68 AA3 4 TRP A 75 ? ILE A 82 ? TRP A 75 ILE A 82 AA3 5 MET A 255 ? ALA A 256 ? MET A 255 ALA A 256 AA4 1 TYR A 142 ? TYR A 151 ? TYR A 142 TYR A 151 AA4 2 PHE A 292 ? SER A 303 ? PHE A 292 SER A 303 AA4 3 VAL A 159 ? PRO A 160 ? VAL A 159 PRO A 160 AA5 1 TYR A 142 ? TYR A 151 ? TYR A 142 TYR A 151 AA5 2 PHE A 292 ? SER A 303 ? PHE A 292 SER A 303 AA5 3 LYS A 181 ? TRP A 191 ? LYS A 181 TRP A 191 AA5 4 ARG A 260 ? VAL A 263 ? ARG A 260 VAL A 263 AA6 1 ALA A 219 ? LEU A 226 ? ALA A 219 LEU A 226 AA6 2 ARG A 210 ? ILE A 216 ? ARG A 210 ILE A 216 AA6 3 THR A 272 ? LYS A 278 ? THR A 272 LYS A 278 AA6 4 LYS A 170 ? GLN A 174 ? LYS A 170 GLN A 174 AA6 5 VAL A 311 ? THR A 313 ? VAL A 311 THR A 313 AA7 1 HIS A 193 ? ASP A 198 ? HIS A 193 ASP A 198 AA7 2 ARG A 202 ? ALA A 205 ? ARG A 202 ALA A 205 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 7 ? N VAL A 7 O ILE A 133 ? O ILE A 133 AA1 2 3 O TYR A 127 ? O TYR A 127 N VAL A 15 ? N VAL A 15 AA2 1 2 N VAL A 7 ? N VAL A 7 O ILE A 133 ? O ILE A 133 AA2 2 3 O VAL A 134 ? O VAL A 134 N LYS A 41 ? N LYS A 41 AA2 3 4 N ILE A 47 ? N ILE A 47 O LEU A 96 ? O LEU A 96 AA3 1 2 N PHE A 31 ? N PHE A 31 O THR A 111 ? O THR A 111 AA3 2 3 O LYS A 114 ? O LYS A 114 N TYR A 66 ? N TYR A 66 AA3 3 4 N VAL A 67 ? N VAL A 67 O TYR A 76 ? O TYR A 76 AA3 4 5 N ILE A 82 ? N ILE A 82 O MET A 255 ? O MET A 255 AA4 1 2 N VAL A 148 ? N VAL A 148 O SER A 297 ? O SER A 297 AA4 2 3 O TYR A 293 ? O TYR A 293 N VAL A 159 ? N VAL A 159 AA5 1 2 N VAL A 148 ? N VAL A 148 O SER A 297 ? O SER A 297 AA5 2 3 O LYS A 302 ? O LYS A 302 N LYS A 181 ? N LYS A 181 AA5 3 4 N THR A 186 ? N THR A 186 O ARG A 260 ? O ARG A 260 AA6 1 2 O LEU A 226 ? O LEU A 226 N ARG A 210 ? N ARG A 210 AA6 2 3 N THR A 213 ? N THR A 213 O LYS A 278 ? O LYS A 278 AA6 3 4 O TYR A 275 ? O TYR A 275 N LYS A 171 ? N LYS A 171 AA6 4 5 N ASN A 172 ? N ASN A 172 O THR A 313 ? O THR A 313 AA7 1 2 N ALA A 194 ? N ALA A 194 O CYS A 204 ? O CYS A 204 # _pdbx_entry_details.entry_id 1PNF _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 762 ? ? 1_555 O A HOH 762 ? ? 4_554 0.56 2 1 O A HOH 761 ? ? 1_555 O A HOH 761 ? ? 4_554 0.80 3 1 O A HOH 763 ? ? 1_555 O A HOH 763 ? ? 4_554 1.16 4 1 O A HOH 764 ? ? 1_555 O A HOH 764 ? ? 3_453 1.49 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 11 ? ? -128.68 -98.17 2 1 TRP A 86 ? ? 60.37 -40.71 3 1 ASN A 152 ? ? -146.44 15.06 4 1 ASN A 218 ? ? 73.71 -9.26 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 581 ? 5.81 . 2 1 O ? A HOH 646 ? 8.76 . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 NAG C1 C N R 250 NAG C2 C N R 251 NAG C3 C N R 252 NAG C4 C N S 253 NAG C5 C N R 254 NAG C6 C N N 255 NAG C7 C N N 256 NAG C8 C N N 257 NAG N2 N N N 258 NAG O1 O N N 259 NAG O3 O N N 260 NAG O4 O N N 261 NAG O5 O N N 262 NAG O6 O N N 263 NAG O7 O N N 264 NAG H1 H N N 265 NAG H2 H N N 266 NAG H3 H N N 267 NAG H4 H N N 268 NAG H5 H N N 269 NAG H61 H N N 270 NAG H62 H N N 271 NAG H81 H N N 272 NAG H82 H N N 273 NAG H83 H N N 274 NAG HN2 H N N 275 NAG HO1 H N N 276 NAG HO3 H N N 277 NAG HO4 H N N 278 NAG HO6 H N N 279 NDG C1 C N S 280 NDG C2 C N R 281 NDG C3 C N R 282 NDG C4 C N S 283 NDG C5 C N R 284 NDG C6 C N N 285 NDG C7 C N N 286 NDG C8 C N N 287 NDG O5 O N N 288 NDG O3 O N N 289 NDG O4 O N N 290 NDG O6 O N N 291 NDG O7 O N N 292 NDG N2 N N N 293 NDG O1 O N N 294 NDG H1 H N N 295 NDG H2 H N N 296 NDG H3 H N N 297 NDG H4 H N N 298 NDG H5 H N N 299 NDG H61 H N N 300 NDG H62 H N N 301 NDG H81 H N N 302 NDG H82 H N N 303 NDG H83 H N N 304 NDG HO3 H N N 305 NDG HO4 H N N 306 NDG HO6 H N N 307 NDG HN2 H N N 308 NDG HO1 H N N 309 PHE N N N N 310 PHE CA C N S 311 PHE C C N N 312 PHE O O N N 313 PHE CB C N N 314 PHE CG C Y N 315 PHE CD1 C Y N 316 PHE CD2 C Y N 317 PHE CE1 C Y N 318 PHE CE2 C Y N 319 PHE CZ C Y N 320 PHE OXT O N N 321 PHE H H N N 322 PHE H2 H N N 323 PHE HA H N N 324 PHE HB2 H N N 325 PHE HB3 H N N 326 PHE HD1 H N N 327 PHE HD2 H N N 328 PHE HE1 H N N 329 PHE HE2 H N N 330 PHE HZ H N N 331 PHE HXT H N N 332 PRO N N N N 333 PRO CA C N S 334 PRO C C N N 335 PRO O O N N 336 PRO CB C N N 337 PRO CG C N N 338 PRO CD C N N 339 PRO OXT O N N 340 PRO H H N N 341 PRO HA H N N 342 PRO HB2 H N N 343 PRO HB3 H N N 344 PRO HG2 H N N 345 PRO HG3 H N N 346 PRO HD2 H N N 347 PRO HD3 H N N 348 PRO HXT H N N 349 SER N N N N 350 SER CA C N S 351 SER C C N N 352 SER O O N N 353 SER CB C N N 354 SER OG O N N 355 SER OXT O N N 356 SER H H N N 357 SER H2 H N N 358 SER HA H N N 359 SER HB2 H N N 360 SER HB3 H N N 361 SER HG H N N 362 SER HXT H N N 363 SO4 S S N N 364 SO4 O1 O N N 365 SO4 O2 O N N 366 SO4 O3 O N N 367 SO4 O4 O N N 368 THR N N N N 369 THR CA C N S 370 THR C C N N 371 THR O O N N 372 THR CB C N R 373 THR OG1 O N N 374 THR CG2 C N N 375 THR OXT O N N 376 THR H H N N 377 THR H2 H N N 378 THR HA H N N 379 THR HB H N N 380 THR HG1 H N N 381 THR HG21 H N N 382 THR HG22 H N N 383 THR HG23 H N N 384 THR HXT H N N 385 TRP N N N N 386 TRP CA C N S 387 TRP C C N N 388 TRP O O N N 389 TRP CB C N N 390 TRP CG C Y N 391 TRP CD1 C Y N 392 TRP CD2 C Y N 393 TRP NE1 N Y N 394 TRP CE2 C Y N 395 TRP CE3 C Y N 396 TRP CZ2 C Y N 397 TRP CZ3 C Y N 398 TRP CH2 C Y N 399 TRP OXT O N N 400 TRP H H N N 401 TRP H2 H N N 402 TRP HA H N N 403 TRP HB2 H N N 404 TRP HB3 H N N 405 TRP HD1 H N N 406 TRP HE1 H N N 407 TRP HE3 H N N 408 TRP HZ2 H N N 409 TRP HZ3 H N N 410 TRP HH2 H N N 411 TRP HXT H N N 412 TYR N N N N 413 TYR CA C N S 414 TYR C C N N 415 TYR O O N N 416 TYR CB C N N 417 TYR CG C Y N 418 TYR CD1 C Y N 419 TYR CD2 C Y N 420 TYR CE1 C Y N 421 TYR CE2 C Y N 422 TYR CZ C Y N 423 TYR OH O N N 424 TYR OXT O N N 425 TYR H H N N 426 TYR H2 H N N 427 TYR HA H N N 428 TYR HB2 H N N 429 TYR HB3 H N N 430 TYR HD1 H N N 431 TYR HD2 H N N 432 TYR HE1 H N N 433 TYR HE2 H N N 434 TYR HH H N N 435 TYR HXT H N N 436 VAL N N N N 437 VAL CA C N S 438 VAL C C N N 439 VAL O O N N 440 VAL CB C N N 441 VAL CG1 C N N 442 VAL CG2 C N N 443 VAL OXT O N N 444 VAL H H N N 445 VAL H2 H N N 446 VAL HA H N N 447 VAL HB H N N 448 VAL HG11 H N N 449 VAL HG12 H N N 450 VAL HG13 H N N 451 VAL HG21 H N N 452 VAL HG22 H N N 453 VAL HG23 H N N 454 VAL HXT H N N 455 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 NAG C1 C2 sing N N 237 NAG C1 O1 sing N N 238 NAG C1 O5 sing N N 239 NAG C1 H1 sing N N 240 NAG C2 C3 sing N N 241 NAG C2 N2 sing N N 242 NAG C2 H2 sing N N 243 NAG C3 C4 sing N N 244 NAG C3 O3 sing N N 245 NAG C3 H3 sing N N 246 NAG C4 C5 sing N N 247 NAG C4 O4 sing N N 248 NAG C4 H4 sing N N 249 NAG C5 C6 sing N N 250 NAG C5 O5 sing N N 251 NAG C5 H5 sing N N 252 NAG C6 O6 sing N N 253 NAG C6 H61 sing N N 254 NAG C6 H62 sing N N 255 NAG C7 C8 sing N N 256 NAG C7 N2 sing N N 257 NAG C7 O7 doub N N 258 NAG C8 H81 sing N N 259 NAG C8 H82 sing N N 260 NAG C8 H83 sing N N 261 NAG N2 HN2 sing N N 262 NAG O1 HO1 sing N N 263 NAG O3 HO3 sing N N 264 NAG O4 HO4 sing N N 265 NAG O6 HO6 sing N N 266 NDG C1 C2 sing N N 267 NDG C1 O5 sing N N 268 NDG C1 O1 sing N N 269 NDG C1 H1 sing N N 270 NDG C2 C3 sing N N 271 NDG C2 N2 sing N N 272 NDG C2 H2 sing N N 273 NDG C3 C4 sing N N 274 NDG C3 O3 sing N N 275 NDG C3 H3 sing N N 276 NDG C4 C5 sing N N 277 NDG C4 O4 sing N N 278 NDG C4 H4 sing N N 279 NDG C5 C6 sing N N 280 NDG C5 O5 sing N N 281 NDG C5 H5 sing N N 282 NDG C6 O6 sing N N 283 NDG C6 H61 sing N N 284 NDG C6 H62 sing N N 285 NDG C7 C8 sing N N 286 NDG C7 O7 doub N N 287 NDG C7 N2 sing N N 288 NDG C8 H81 sing N N 289 NDG C8 H82 sing N N 290 NDG C8 H83 sing N N 291 NDG O3 HO3 sing N N 292 NDG O4 HO4 sing N N 293 NDG O6 HO6 sing N N 294 NDG N2 HN2 sing N N 295 NDG O1 HO1 sing N N 296 PHE N CA sing N N 297 PHE N H sing N N 298 PHE N H2 sing N N 299 PHE CA C sing N N 300 PHE CA CB sing N N 301 PHE CA HA sing N N 302 PHE C O doub N N 303 PHE C OXT sing N N 304 PHE CB CG sing N N 305 PHE CB HB2 sing N N 306 PHE CB HB3 sing N N 307 PHE CG CD1 doub Y N 308 PHE CG CD2 sing Y N 309 PHE CD1 CE1 sing Y N 310 PHE CD1 HD1 sing N N 311 PHE CD2 CE2 doub Y N 312 PHE CD2 HD2 sing N N 313 PHE CE1 CZ doub Y N 314 PHE CE1 HE1 sing N N 315 PHE CE2 CZ sing Y N 316 PHE CE2 HE2 sing N N 317 PHE CZ HZ sing N N 318 PHE OXT HXT sing N N 319 PRO N CA sing N N 320 PRO N CD sing N N 321 PRO N H sing N N 322 PRO CA C sing N N 323 PRO CA CB sing N N 324 PRO CA HA sing N N 325 PRO C O doub N N 326 PRO C OXT sing N N 327 PRO CB CG sing N N 328 PRO CB HB2 sing N N 329 PRO CB HB3 sing N N 330 PRO CG CD sing N N 331 PRO CG HG2 sing N N 332 PRO CG HG3 sing N N 333 PRO CD HD2 sing N N 334 PRO CD HD3 sing N N 335 PRO OXT HXT sing N N 336 SER N CA sing N N 337 SER N H sing N N 338 SER N H2 sing N N 339 SER CA C sing N N 340 SER CA CB sing N N 341 SER CA HA sing N N 342 SER C O doub N N 343 SER C OXT sing N N 344 SER CB OG sing N N 345 SER CB HB2 sing N N 346 SER CB HB3 sing N N 347 SER OG HG sing N N 348 SER OXT HXT sing N N 349 SO4 S O1 doub N N 350 SO4 S O2 doub N N 351 SO4 S O3 sing N N 352 SO4 S O4 sing N N 353 THR N CA sing N N 354 THR N H sing N N 355 THR N H2 sing N N 356 THR CA C sing N N 357 THR CA CB sing N N 358 THR CA HA sing N N 359 THR C O doub N N 360 THR C OXT sing N N 361 THR CB OG1 sing N N 362 THR CB CG2 sing N N 363 THR CB HB sing N N 364 THR OG1 HG1 sing N N 365 THR CG2 HG21 sing N N 366 THR CG2 HG22 sing N N 367 THR CG2 HG23 sing N N 368 THR OXT HXT sing N N 369 TRP N CA sing N N 370 TRP N H sing N N 371 TRP N H2 sing N N 372 TRP CA C sing N N 373 TRP CA CB sing N N 374 TRP CA HA sing N N 375 TRP C O doub N N 376 TRP C OXT sing N N 377 TRP CB CG sing N N 378 TRP CB HB2 sing N N 379 TRP CB HB3 sing N N 380 TRP CG CD1 doub Y N 381 TRP CG CD2 sing Y N 382 TRP CD1 NE1 sing Y N 383 TRP CD1 HD1 sing N N 384 TRP CD2 CE2 doub Y N 385 TRP CD2 CE3 sing Y N 386 TRP NE1 CE2 sing Y N 387 TRP NE1 HE1 sing N N 388 TRP CE2 CZ2 sing Y N 389 TRP CE3 CZ3 doub Y N 390 TRP CE3 HE3 sing N N 391 TRP CZ2 CH2 doub Y N 392 TRP CZ2 HZ2 sing N N 393 TRP CZ3 CH2 sing Y N 394 TRP CZ3 HZ3 sing N N 395 TRP CH2 HH2 sing N N 396 TRP OXT HXT sing N N 397 TYR N CA sing N N 398 TYR N H sing N N 399 TYR N H2 sing N N 400 TYR CA C sing N N 401 TYR CA CB sing N N 402 TYR CA HA sing N N 403 TYR C O doub N N 404 TYR C OXT sing N N 405 TYR CB CG sing N N 406 TYR CB HB2 sing N N 407 TYR CB HB3 sing N N 408 TYR CG CD1 doub Y N 409 TYR CG CD2 sing Y N 410 TYR CD1 CE1 sing Y N 411 TYR CD1 HD1 sing N N 412 TYR CD2 CE2 doub Y N 413 TYR CD2 HD2 sing N N 414 TYR CE1 CZ doub Y N 415 TYR CE1 HE1 sing N N 416 TYR CE2 CZ sing Y N 417 TYR CE2 HE2 sing N N 418 TYR CZ OH sing N N 419 TYR OH HH sing N N 420 TYR OXT HXT sing N N 421 VAL N CA sing N N 422 VAL N H sing N N 423 VAL N H2 sing N N 424 VAL CA C sing N N 425 VAL CA CB sing N N 426 VAL CA HA sing N N 427 VAL C O doub N N 428 VAL C OXT sing N N 429 VAL CB CG1 sing N N 430 VAL CB CG2 sing N N 431 VAL CB HB sing N N 432 VAL CG1 HG11 sing N N 433 VAL CG1 HG12 sing N N 434 VAL CG1 HG13 sing N N 435 VAL CG2 HG21 sing N N 436 VAL CG2 HG22 sing N N 437 VAL CG2 HG23 sing N N 438 VAL OXT HXT sing N N 439 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NDG 1 n 2 NAG 2 n # _atom_sites.entry_id 1PNF _atom_sites.fract_transf_matrix[1][1] 0.011480 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008125 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012868 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_sites_footnote.id _atom_sites_footnote.text 1 'CIS PROLINE - PRO 196' 2 'CYS 204 - ALA 205 OMEGA = 0.37 PEPTIDE BOND DEVIATES SIGNIFICANTLY FROM TRANS CONFORMATION' 3 'CIS PROLINE - PRO 241' # loop_ _atom_type.symbol C N O S # loop_