HEADER HYDROLASE 07-SEP-92 1POC TITLE CRYSTAL STRUCTURE OF BEE-VENOM PHOSPHOLIPASE A2 IN A COMPLEX WITH A TITLE 2 TRANSITION-STATE ANALOGUE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOLIPASE A2; COMPND 3 CHAIN: A; COMPND 4 EC: 3.1.1.4; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: APIS MELLIFERA; SOURCE 3 ORGANISM_COMMON: HONEY BEE; SOURCE 4 ORGANISM_TAXID: 7460 KEYWDS HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR D.L.SCOTT,Z.OTWINOWSKI,P.B.SIGLER REVDAT 5 30-OCT-24 1POC 1 REMARK LINK REVDAT 4 14-AUG-19 1POC 1 REMARK REVDAT 3 17-JUL-19 1POC 1 REMARK REVDAT 2 24-FEB-09 1POC 1 VERSN REVDAT 1 31-OCT-93 1POC 0 JRNL AUTH D.L.SCOTT,Z.OTWINOWSKI,M.H.GELB,P.B.SIGLER JRNL TITL CRYSTAL STRUCTURE OF BEE-VENOM PHOSPHOLIPASE A2 IN A COMPLEX JRNL TITL 2 WITH A TRANSITION-STATE ANALOGUE. JRNL REF SCIENCE V. 250 1563 1990 JRNL REFN ISSN 0036-8075 JRNL PMID 2274788 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.L.SCOTT,S.P.WHITE,Z.OTWINOWSKI,W.YUAN,M.H.GELB,P.B.SIGLER REMARK 1 TITL INTERFACIAL CATALYSIS: THE MECHANISM OF PHOSPHOLIPASE A2 REMARK 1 REF SCIENCE V. 250 1541 1990 REMARK 1 REFN ISSN 0036-8075 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PROFFT REMARK 3 AUTHORS : KONNERT,HENDRICKSON,FINZEL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1065 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 32 REMARK 3 SOLVENT ATOMS : 80 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1POC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000175763. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 71.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 -X+1/2,Y,-Z+3/4 REMARK 290 6555 X,-Y+1/2,-Z+1/4 REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X,-Y,Z REMARK 290 11555 -Y+1/2,X,Z+3/4 REMARK 290 12555 Y,-X+1/2,Z+1/4 REMARK 290 13555 -X,Y+1/2,-Z+1/4 REMARK 290 14555 X+1/2,-Y,-Z+3/4 REMARK 290 15555 Y,X,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 44.75000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 44.75000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.25000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 44.75000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 33.12500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 44.75000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 99.37500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 44.75000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 99.37500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 44.75000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 33.12500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 44.75000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 44.75000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 66.25000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 44.75000 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 44.75000 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 66.25000 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 44.75000 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 99.37500 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 44.75000 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 33.12500 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 44.75000 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 33.12500 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 44.75000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 99.37500 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 44.75000 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 44.75000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 66.25000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 89.50000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 89.50000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PHE A 88 NH2 ARG A 112 1.89 REMARK 500 OE1 GLU A 107 OE2 GLU A 110 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 241 O HOH A 244 6555 1.06 REMARK 500 O HOH A 244 O HOH A 247 6555 2.02 REMARK 500 NH1 ARG A 23 O HOH A 224 10665 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 32 NE - CZ - NH2 ANGL. DEV. = 3.4 DEGREES REMARK 500 MET A 41 CG - SD - CE ANGL. DEV. = 10.1 DEGREES REMARK 500 ARG A 58 NE - CZ - NH2 ANGL. DEV. = 3.5 DEGREES REMARK 500 LYS A 85 CD - CE - NZ ANGL. DEV. = 26.6 DEGREES REMARK 500 ARG A 108 NE - CZ - NH2 ANGL. DEV. = 3.3 DEGREES REMARK 500 LYS A 122 CB - CG - CD ANGL. DEV. = 26.4 DEGREES REMARK 500 LYS A 122 CG - CD - CE ANGL. DEV. = 34.8 DEGREES REMARK 500 ASP A 130 CB - CG - OD1 ANGL. DEV. = 6.7 DEGREES REMARK 500 ASP A 130 CB - CG - OD2 ANGL. DEV. = -5.9 DEGREES REMARK 500 ARG A 132 CD - NE - CZ ANGL. DEV. = 36.9 DEGREES REMARK 500 ARG A 132 NE - CZ - NH1 ANGL. DEV. = 6.5 DEGREES REMARK 500 ARG A 132 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 107 76.32 -6.04 REMARK 500 ARG A 108 7.32 -60.59 REMARK 500 THR A 109 91.22 165.05 REMARK 500 GLU A 110 164.91 -23.88 REMARK 500 HIS A 115 74.79 -117.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 501 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TRP A 8 O REMARK 620 2 GLY A 10 O 97.2 REMARK 620 3 GLY A 12 O 88.5 79.5 REMARK 620 4 ASP A 35 OD2 94.8 150.7 74.1 REMARK 620 5 ASP A 35 OD1 100.8 146.4 128.8 55.1 REMARK 620 6 GEL A 420 O4P 179.3 82.3 91.8 85.9 79.5 REMARK 620 7 GEL A 420 O2P 76.4 76.3 149.5 132.7 80.6 103.0 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: CA1 REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GEL A 420 DBREF 1POC A 1 134 UNP P00630 PA2_APIME 29 162 SEQRES 1 A 134 ILE ILE TYR PRO GLY THR LEU TRP CYS GLY HIS GLY ASN SEQRES 2 A 134 LYS SER SER GLY PRO ASN GLU LEU GLY ARG PHE LYS HIS SEQRES 3 A 134 THR ASP ALA CYS CYS ARG THR HIS ASP MET CYS PRO ASP SEQRES 4 A 134 VAL MET SER ALA GLY GLU SER LYS HIS GLY LEU THR ASN SEQRES 5 A 134 THR ALA SER HIS THR ARG LEU SER CYS ASP CYS ASP ASP SEQRES 6 A 134 LYS PHE TYR ASP CYS LEU LYS ASN SER ALA ASP THR ILE SEQRES 7 A 134 SER SER TYR PHE VAL GLY LYS MET TYR PHE ASN LEU ILE SEQRES 8 A 134 ASP THR LYS CYS TYR LYS LEU GLU HIS PRO VAL THR GLY SEQRES 9 A 134 CYS GLY GLU ARG THR GLU GLY ARG CYS LEU HIS TYR THR SEQRES 10 A 134 VAL ASP LYS SER LYS PRO LYS VAL TYR GLN TRP PHE ASP SEQRES 11 A 134 LEU ARG LYS TYR HET CA A 501 1 HET GEL A 420 31 HETNAM CA CALCIUM ION HETNAM GEL 1-O-OCTYL-2-HEPTYLPHOSPHONYL-SN-GLYCERO-3- HETNAM 2 GEL PHOSPHOETHANOLAMINE FORMUL 2 CA CA 2+ FORMUL 3 GEL C20 H45 N O8 P2 FORMUL 4 HOH *80(H2 O) HELIX 1 H1 PHE A 24 CYS A 37 1 14 HELIX 2 H2 CYS A 61 SER A 74 1 14 HELIX 3 H3 ASP A 76 ASN A 89 1 14 SHEET 1 A 2 VAL A 40 MET A 41 0 SHEET 2 A 2 ARG A 58 LEU A 59 -1 O ARG A 58 N MET A 41 SHEET 1 B 2 SER A 46 LYS A 47 0 SHEET 2 B 2 LEU A 50 THR A 51 -1 N LEU A 50 O LYS A 47 SHEET 1 C 2 CYS A 95 GLU A 99 0 SHEET 2 C 2 VAL A 125 PHE A 129 -1 N VAL A 125 O GLU A 99 SHEET 1 D 2 VAL A 102 GLY A 104 0 SHEET 2 D 2 THR A 117 VAL A 118 -1 O THR A 117 N THR A 103 SSBOND 1 CYS A 9 CYS A 31 1555 1555 2.01 SSBOND 2 CYS A 30 CYS A 70 1555 1555 1.77 SSBOND 3 CYS A 37 CYS A 63 1555 1555 1.98 SSBOND 4 CYS A 61 CYS A 95 1555 1555 2.03 SSBOND 5 CYS A 105 CYS A 113 1555 1555 1.93 LINK O TRP A 8 CA CA A 501 1555 1555 2.35 LINK O GLY A 10 CA CA A 501 1555 1555 2.38 LINK O GLY A 12 CA CA A 501 1555 1555 2.36 LINK OD2 ASP A 35 CA CA A 501 1555 1555 2.40 LINK OD1 ASP A 35 CA CA A 501 1555 1555 2.42 LINK O4P GEL A 420 CA CA A 501 1555 1555 2.29 LINK O2P GEL A 420 CA CA A 501 1555 1555 2.30 SITE 1 CA1 4 TRP A 8 GLY A 10 GLY A 12 ASP A 35 SITE 1 AC1 5 TRP A 8 GLY A 10 GLY A 12 ASP A 35 SITE 2 AC1 5 GEL A 420 SITE 1 AC2 13 ILE A 1 TRP A 8 GLY A 10 HIS A 11 SITE 2 AC2 13 GLY A 12 HIS A 34 ASP A 35 THR A 57 SITE 3 AC2 13 PHE A 67 PHE A 82 MET A 86 TYR A 87 SITE 4 AC2 13 CA A 501 CRYST1 89.500 89.500 132.500 90.00 90.00 90.00 I 41 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011173 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011173 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007547 0.00000 TER 1066 TYR A 134 HETATM 1067 CA CA A 501 38.120 33.801 20.124 1.00 15.26 CA HETATM 1068 C1 GEL A 420 40.690 34.082 24.832 1.00 19.35 C HETATM 1069 O1 GEL A 420 41.412 35.341 24.725 1.00 20.42 O HETATM 1070 C11 GEL A 420 40.474 36.372 25.162 1.00 22.85 C HETATM 1071 C12 GEL A 420 40.820 37.719 24.543 1.00 23.99 C HETATM 1072 C13 GEL A 420 40.877 38.888 25.498 1.00 25.38 C HETATM 1073 C14 GEL A 420 41.036 40.262 24.876 1.00 26.22 C HETATM 1074 C15 GEL A 420 41.880 41.217 25.655 1.00 27.09 C HETATM 1075 C16 GEL A 420 41.602 42.676 25.580 1.00 27.56 C HETATM 1076 C17 GEL A 420 42.211 43.542 26.662 1.00 27.85 C HETATM 1077 C18 GEL A 420 42.970 44.771 26.136 1.00 28.13 C HETATM 1078 C2 GEL A 420 40.382 33.552 23.457 1.00 17.95 C HETATM 1079 O2 GEL A 420 41.538 33.620 22.647 1.00 17.46 O HETATM 1080 P2 GEL A 420 41.665 33.942 21.082 1.00 16.87 P HETATM 1081 O1P GEL A 420 42.325 32.743 20.489 1.00 16.58 O HETATM 1082 O2P GEL A 420 40.339 34.248 20.519 1.00 17.85 O HETATM 1083 C22 GEL A 420 42.697 35.292 21.646 1.00 18.75 C HETATM 1084 C23 GEL A 420 43.050 36.476 20.927 1.00 20.00 C HETATM 1085 C24 GEL A 420 43.560 37.738 21.587 1.00 21.60 C HETATM 1086 C25 GEL A 420 44.104 38.667 20.549 1.00 22.97 C HETATM 1087 C26 GEL A 420 44.093 40.120 20.622 1.00 24.18 C HETATM 1088 C27 GEL A 420 43.491 40.878 19.451 1.00 24.09 C HETATM 1089 C28 GEL A 420 42.336 41.765 19.929 1.00 25.01 C HETATM 1090 C3 GEL A 420 39.780 32.158 23.483 1.00 18.11 C HETATM 1091 O3 GEL A 420 38.536 32.238 24.210 1.00 18.48 O HETATM 1092 P3 GEL A 420 37.115 32.529 23.443 1.00 19.24 P HETATM 1093 O3P GEL A 420 36.247 33.187 24.463 1.00 19.71 O HETATM 1094 O4P GEL A 420 37.320 33.279 22.209 1.00 20.69 O HETATM 1095 O5P GEL A 420 36.907 31.009 23.374 1.00 20.44 O HETATM 1096 C31 GEL A 420 35.972 30.254 22.665 1.00 21.88 C HETATM 1097 C32 GEL A 420 35.197 29.379 23.650 1.00 21.93 C HETATM 1098 N3 GEL A 420 33.752 29.570 23.277 1.00 22.75 N HETATM 1099 O HOH A 201 38.643 41.622 28.597 1.00 24.71 O HETATM 1100 O HOH A 202 34.617 44.442 22.669 1.00 29.29 O HETATM 1101 O HOH A 203 33.837 40.186 20.800 1.00 30.05 O HETATM 1102 O HOH A 204 45.074 25.039 13.781 1.00 23.08 O HETATM 1103 O HOH A 205 47.535 28.296 10.880 1.00 12.49 O HETATM 1104 O HOH A 206 43.787 22.318 12.517 1.00 28.08 O HETATM 1105 O HOH A 207 41.495 26.049 12.447 1.00 14.33 O HETATM 1106 O HOH A 208 43.770 25.065 8.607 1.00 36.39 O HETATM 1107 O HOH A 209 43.303 24.481 10.971 1.00 29.91 O HETATM 1108 O HOH A 210 45.741 26.971 18.169 1.00 13.65 O HETATM 1109 O HOH A 211 37.939 39.069 7.441 1.00 27.95 O HETATM 1110 O HOH A 212 34.448 21.508 11.640 1.00 22.18 O HETATM 1111 O HOH A 213 54.515 33.857 12.498 1.00 27.52 O HETATM 1112 O HOH A 214 44.492 27.948 7.422 1.00 41.67 O HETATM 1113 O HOH A 215 44.275 30.809 29.214 1.00 13.68 O HETATM 1114 O HOH A 216 34.520 31.555 19.950 1.00 16.55 O HETATM 1115 O HOH A 217 44.914 25.704 20.849 1.00 27.47 O HETATM 1116 O HOH A 218 53.900 27.414 30.557 1.00 41.31 O HETATM 1117 O HOH A 219 34.661 43.777 17.391 1.00 22.17 O HETATM 1118 O HOH A 220 35.346 43.195 9.712 1.00 61.59 O HETATM 1119 O HOH A 221 54.547 35.702 14.775 1.00 21.07 O HETATM 1120 O HOH A 222 58.072 36.151 17.352 1.00 30.88 O HETATM 1121 O HOH A 223 50.294 42.840 6.258 1.00 54.55 O HETATM 1122 O HOH A 224 47.409 45.976 7.414 1.00 55.23 O HETATM 1123 O HOH A 225 49.597 39.143 8.302 1.00 9.99 O HETATM 1124 O HOH A 226 27.791 47.490 13.177 1.00 31.89 O HETATM 1125 O HOH A 227 53.546 43.063 13.646 1.00 34.03 O HETATM 1126 O HOH A 228 56.759 40.380 7.410 1.00 30.66 O HETATM 1127 O HOH A 229 43.348 44.611 10.793 1.00 47.57 O HETATM 1128 O HOH A 230 49.491 37.085 28.938 1.00 16.30 O HETATM 1129 O HOH A 231 43.149 33.615 28.597 1.00 23.29 O HETATM 1130 O HOH A 232 53.271 29.016 27.463 1.00 60.22 O HETATM 1131 O HOH A 233 43.965 38.285 31.958 1.00 33.65 O HETATM 1132 O HOH A 234 45.832 19.108 32.576 1.00 18.57 O HETATM 1133 O HOH A 235 55.693 23.527 25.619 1.00 57.45 O HETATM 1134 O HOH A 236 53.891 18.598 24.242 1.00 45.26 O HETATM 1135 O HOH A 237 46.863 20.065 16.749 1.00 30.71 O HETATM 1136 O HOH A 238 47.345 27.803 8.287 1.00 30.32 O HETATM 1137 O HOH A 239 50.431 27.924 11.749 1.00 12.89 O HETATM 1138 O HOH A 240 46.940 21.115 30.118 1.00 24.61 O HETATM 1139 O HOH A 241 41.425 22.856 20.185 1.00 42.99 O HETATM 1140 O HOH A 242 35.082 23.099 28.259 1.00 34.08 O HETATM 1141 O HOH A 243 46.392 22.217 18.261 1.00 38.18 O HETATM 1142 O HOH A 244 40.756 22.442 13.548 1.00 45.03 O HETATM 1143 O HOH A 245 51.373 25.048 13.033 1.00 35.79 O HETATM 1144 O HOH A 246 51.087 28.928 8.070 1.00 26.21 O HETATM 1145 O HOH A 247 40.401 21.556 17.741 1.00 27.34 O HETATM 1146 O HOH A 248 49.396 20.841 17.622 1.00 44.01 O HETATM 1147 O HOH A 249 37.334 26.825 4.898 1.00 56.06 O HETATM 1148 O HOH A 250 51.120 34.583 31.827 1.00 26.46 O HETATM 1149 O HOH A 251 53.871 29.448 36.928 1.00 33.93 O HETATM 1150 O HOH A 252 42.218 19.194 41.241 1.00 28.68 O HETATM 1151 O HOH A 253 34.315 46.950 24.183 1.00 21.93 O HETATM 1152 O HOH A 254 33.560 47.008 26.907 1.00 43.29 O HETATM 1153 O HOH A 255 31.567 47.557 23.772 1.00 40.97 O HETATM 1154 O HOH A 256 46.630 34.719 4.703 1.00 30.36 O HETATM 1155 O HOH A 257 35.805 25.261 23.367 1.00 31.89 O HETATM 1156 O HOH A 258 38.270 18.435 37.855 1.00 38.39 O HETATM 1157 O HOH A 259 41.294 29.902 41.540 1.00 28.33 O HETATM 1158 O HOH A 260 46.951 27.756 41.579 1.00 29.54 O HETATM 1159 O HOH A 261 30.967 26.871 8.068 1.00 24.92 O HETATM 1160 O HOH A 262 35.278 37.680 6.286 1.00 51.72 O HETATM 1161 O HOH A 263 36.850 45.303 16.110 1.00 47.39 O HETATM 1162 O HOH A 264 32.159 41.075 18.292 1.00 44.79 O HETATM 1163 O HOH A 265 33.776 42.470 25.466 1.00 51.96 O HETATM 1164 O HOH A 266 40.358 32.875 3.881 1.00 55.53 O HETATM 1165 O HOH A 267 46.952 38.104 3.978 1.00 48.89 O HETATM 1166 O HOH A 268 46.419 35.587 1.665 1.00 56.98 O HETATM 1167 O HOH A 269 60.682 40.238 19.527 1.00 51.59 O HETATM 1168 O HOH A 270 59.333 37.695 19.293 1.00 49.82 O HETATM 1169 O HOH A 271 31.181 27.331 15.972 1.00 35.14 O HETATM 1170 O HOH A 272 48.174 23.192 46.064 1.00 64.75 O HETATM 1171 O HOH A 273 47.438 20.419 47.828 1.00 54.70 O HETATM 1172 O HOH A 274 50.504 21.722 29.545 1.00 45.37 O HETATM 1173 O HOH A 275 34.296 36.499 26.701 1.00 64.80 O HETATM 1174 O HOH A 276 34.060 34.476 28.696 1.00 64.80 O HETATM 1175 O HOH A 277 32.242 27.415 29.343 1.00 64.80 O HETATM 1176 O HOH A 278 34.844 20.443 37.937 1.00 64.80 O HETATM 1177 O HOH A 279 27.359 29.282 7.636 1.00 64.80 O HETATM 1178 O HOH A 280 42.947 20.156 27.408 1.00 64.80 O CONECT 58 1067 CONECT 74 234 CONECT 78 1067 CONECT 92 1067 CONECT 228 532 CONECT 234 74 CONECT 269 1067 CONECT 270 1067 CONECT 284 470 CONECT 456 731 CONECT 470 284 CONECT 532 228 CONECT 731 456 CONECT 810 871 CONECT 871 810 CONECT 1067 58 78 92 269 CONECT 1067 270 1082 1094 CONECT 1068 1069 1078 CONECT 1069 1068 1070 CONECT 1070 1069 1071 CONECT 1071 1070 1072 CONECT 1072 1071 1073 CONECT 1073 1072 1074 CONECT 1074 1073 1075 CONECT 1075 1074 1076 CONECT 1076 1075 1077 CONECT 1077 1076 CONECT 1078 1068 1079 1090 CONECT 1079 1078 1080 CONECT 1080 1079 1081 1082 1083 CONECT 1081 1080 CONECT 1082 1067 1080 CONECT 1083 1080 1084 CONECT 1084 1083 1085 CONECT 1085 1084 1086 CONECT 1086 1085 1087 CONECT 1087 1086 1088 CONECT 1088 1087 1089 CONECT 1089 1088 CONECT 1090 1078 1091 CONECT 1091 1090 1092 CONECT 1092 1091 1093 1094 1095 CONECT 1093 1092 CONECT 1094 1067 1092 CONECT 1095 1092 1096 CONECT 1096 1095 1097 CONECT 1097 1096 1098 CONECT 1098 1097 MASTER 363 0 2 3 8 0 7 6 1177 1 48 11 END