data_1PPH # _entry.id 1PPH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1PPH pdb_00001pph 10.2210/pdb1pph/pdb WWPDB D_1000175787 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1994-01-31 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2012-12-12 5 'Structure model' 1 4 2024-06-05 6 'Structure model' 1 5 2024-10-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Non-polymer description' 6 3 'Structure model' 'Structure summary' 7 3 'Structure model' 'Version format compliance' 8 4 'Structure model' Other 9 5 'Structure model' 'Data collection' 10 5 'Structure model' 'Database references' 11 5 'Structure model' 'Derived calculations' 12 5 'Structure model' Other 13 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' pdbx_database_status 5 5 'Structure model' struct_site 6 6 'Structure model' pdbx_entry_details 7 6 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_pdbx_database_status.process_site' 4 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 5 'Structure model' '_struct_site.pdbx_auth_seq_id' 7 6 'Structure model' '_pdbx_entry_details.has_protein_modification' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1PPH _pdbx_database_status.recvd_initial_deposition_date 1991-10-24 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bode, W.' 1 'Turk, D.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Geometry of binding of the N alpha-tosylated piperidides of m-amidino-, p-amidino- and p-guanidino phenylalanine to thrombin and trypsin. X-ray crystal structures of their trypsin complexes and modeling of their thrombin complexes. ; 'FEBS Lett.' 287 133 138 1991 FEBLAL NE 0014-5793 0165 ? 1879520 '10.1016/0014-5793(91)80033-Y' 1 ;Geometry of Binding of the Benzamidine-and Arginine-Based Inhibitors N Alpha-(2-Naphthyl-Sulphonyl-Glycyl)-Dl-P-Amidinophenylalanyl-Piperidine (Napap) and (2R,4R)-4-Methyl-1-[N Alpha-(3-Methyl-1,2,3,4-Tetrahydro-8-Quinolinesulphonyl)-L-Arginyl]-2-Piperidine Carboxylic Acid (Mqpa) to Human Alpha-Thrombin: X-Ray Crystallographic Determination of the Napap-Trypsin Complex and Modeling of Napap-Thrombin and Mqpa-Thrombin ; Eur.J.Biochem. 193 175 ? 1990 EJBCAI IX 0014-2956 0262 ? ? ? 2 ;The Refined 1.9 Angstroms Crystal Structure of Human Alpha-Thrombin: Interaction with D-Phe-Pro-Arg Chloromethylketone and Significance of the Tyr-Pro-Pro-Trp Insertion Segment ; 'Embo J.' 8 3467 ? 1989 EMJODG UK 0261-4189 0897 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Turk, D.' 1 ? primary 'Sturzebecher, J.' 2 ? primary 'Bode, W.' 3 ? 1 'Bode, W.' 4 ? 1 'Turk, D.' 5 ? 1 'Stuerzebecher, J.' 6 ? 2 'Bode, W.' 7 ? 2 'Mayr, I.' 8 ? 2 'Baumann, U.' 9 ? 2 'Huber, R.' 10 ? 2 'Stone, S.R.' 11 ? 2 'Hofsteenge, J.' 12 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man TRYPSIN 23324.287 1 3.4.21.4 ? ? ? 2 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 4 non-polymer syn '3-[(2S)-2-{[(4-methylphenyl)sulfonyl]amino}-3-oxo-3-piperidin-1-ylpropyl]benzenecarboximidamide' 428.548 1 ? ? ? ? 5 water nat water 18.015 214 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;IVGGYTCGANTVPYQVSLNSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNT LNNDIMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNM FCAGYLEGGKDSCQGDSGGPVVCSGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIASN ; _entity_poly.pdbx_seq_one_letter_code_can ;IVGGYTCGANTVPYQVSLNSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNT LNNDIMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNM FCAGYLEGGKDSCQGDSGGPVVCSGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIASN ; _entity_poly.pdbx_strand_id E _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 'SULFATE ION' SO4 4 '3-[(2S)-2-{[(4-methylphenyl)sulfonyl]amino}-3-oxo-3-piperidin-1-ylpropyl]benzenecarboximidamide' 0ZG 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ILE n 1 2 VAL n 1 3 GLY n 1 4 GLY n 1 5 TYR n 1 6 THR n 1 7 CYS n 1 8 GLY n 1 9 ALA n 1 10 ASN n 1 11 THR n 1 12 VAL n 1 13 PRO n 1 14 TYR n 1 15 GLN n 1 16 VAL n 1 17 SER n 1 18 LEU n 1 19 ASN n 1 20 SER n 1 21 GLY n 1 22 TYR n 1 23 HIS n 1 24 PHE n 1 25 CYS n 1 26 GLY n 1 27 GLY n 1 28 SER n 1 29 LEU n 1 30 ILE n 1 31 ASN n 1 32 SER n 1 33 GLN n 1 34 TRP n 1 35 VAL n 1 36 VAL n 1 37 SER n 1 38 ALA n 1 39 ALA n 1 40 HIS n 1 41 CYS n 1 42 TYR n 1 43 LYS n 1 44 SER n 1 45 GLY n 1 46 ILE n 1 47 GLN n 1 48 VAL n 1 49 ARG n 1 50 LEU n 1 51 GLY n 1 52 GLU n 1 53 ASP n 1 54 ASN n 1 55 ILE n 1 56 ASN n 1 57 VAL n 1 58 VAL n 1 59 GLU n 1 60 GLY n 1 61 ASN n 1 62 GLU n 1 63 GLN n 1 64 PHE n 1 65 ILE n 1 66 SER n 1 67 ALA n 1 68 SER n 1 69 LYS n 1 70 SER n 1 71 ILE n 1 72 VAL n 1 73 HIS n 1 74 PRO n 1 75 SER n 1 76 TYR n 1 77 ASN n 1 78 SER n 1 79 ASN n 1 80 THR n 1 81 LEU n 1 82 ASN n 1 83 ASN n 1 84 ASP n 1 85 ILE n 1 86 MET n 1 87 LEU n 1 88 ILE n 1 89 LYS n 1 90 LEU n 1 91 LYS n 1 92 SER n 1 93 ALA n 1 94 ALA n 1 95 SER n 1 96 LEU n 1 97 ASN n 1 98 SER n 1 99 ARG n 1 100 VAL n 1 101 ALA n 1 102 SER n 1 103 ILE n 1 104 SER n 1 105 LEU n 1 106 PRO n 1 107 THR n 1 108 SER n 1 109 CYS n 1 110 ALA n 1 111 SER n 1 112 ALA n 1 113 GLY n 1 114 THR n 1 115 GLN n 1 116 CYS n 1 117 LEU n 1 118 ILE n 1 119 SER n 1 120 GLY n 1 121 TRP n 1 122 GLY n 1 123 ASN n 1 124 THR n 1 125 LYS n 1 126 SER n 1 127 SER n 1 128 GLY n 1 129 THR n 1 130 SER n 1 131 TYR n 1 132 PRO n 1 133 ASP n 1 134 VAL n 1 135 LEU n 1 136 LYS n 1 137 CYS n 1 138 LEU n 1 139 LYS n 1 140 ALA n 1 141 PRO n 1 142 ILE n 1 143 LEU n 1 144 SER n 1 145 ASP n 1 146 SER n 1 147 SER n 1 148 CYS n 1 149 LYS n 1 150 SER n 1 151 ALA n 1 152 TYR n 1 153 PRO n 1 154 GLY n 1 155 GLN n 1 156 ILE n 1 157 THR n 1 158 SER n 1 159 ASN n 1 160 MET n 1 161 PHE n 1 162 CYS n 1 163 ALA n 1 164 GLY n 1 165 TYR n 1 166 LEU n 1 167 GLU n 1 168 GLY n 1 169 GLY n 1 170 LYS n 1 171 ASP n 1 172 SER n 1 173 CYS n 1 174 GLN n 1 175 GLY n 1 176 ASP n 1 177 SER n 1 178 GLY n 1 179 GLY n 1 180 PRO n 1 181 VAL n 1 182 VAL n 1 183 CYS n 1 184 SER n 1 185 GLY n 1 186 LYS n 1 187 LEU n 1 188 GLN n 1 189 GLY n 1 190 ILE n 1 191 VAL n 1 192 SER n 1 193 TRP n 1 194 GLY n 1 195 SER n 1 196 GLY n 1 197 CYS n 1 198 ALA n 1 199 GLN n 1 200 LYS n 1 201 ASN n 1 202 LYS n 1 203 PRO n 1 204 GLY n 1 205 VAL n 1 206 TYR n 1 207 THR n 1 208 LYS n 1 209 VAL n 1 210 CYS n 1 211 ASN n 1 212 TYR n 1 213 VAL n 1 214 SER n 1 215 TRP n 1 216 ILE n 1 217 LYS n 1 218 GLN n 1 219 THR n 1 220 ILE n 1 221 ALA n 1 222 SER n 1 223 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name pig _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue PANCREAS _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Sus scrofa' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9823 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 0ZG peptide-like . '3-[(2S)-2-{[(4-methylphenyl)sulfonyl]amino}-3-oxo-3-piperidin-1-ylpropyl]benzenecarboximidamide' 4-TAPAP 'C22 H28 N4 O3 S' 428.548 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ILE 1 16 16 ILE ILE E . n A 1 2 VAL 2 17 17 VAL VAL E . n A 1 3 GLY 3 18 18 GLY GLY E . n A 1 4 GLY 4 19 19 GLY GLY E . n A 1 5 TYR 5 20 20 TYR TYR E . n A 1 6 THR 6 21 21 THR THR E . n A 1 7 CYS 7 22 22 CYS CYS E . n A 1 8 GLY 8 23 23 GLY GLY E . n A 1 9 ALA 9 24 24 ALA ALA E . n A 1 10 ASN 10 25 25 ASN ASN E . n A 1 11 THR 11 26 26 THR THR E . n A 1 12 VAL 12 27 27 VAL VAL E . n A 1 13 PRO 13 28 28 PRO PRO E . n A 1 14 TYR 14 29 29 TYR TYR E . n A 1 15 GLN 15 30 30 GLN GLN E . n A 1 16 VAL 16 31 31 VAL VAL E . n A 1 17 SER 17 32 32 SER SER E . n A 1 18 LEU 18 33 33 LEU LEU E . n A 1 19 ASN 19 34 34 ASN ASN E . n A 1 20 SER 20 37 37 SER SER E . n A 1 21 GLY 21 38 38 GLY GLY E . n A 1 22 TYR 22 39 39 TYR TYR E . n A 1 23 HIS 23 40 40 HIS HIS E . n A 1 24 PHE 24 41 41 PHE PHE E . n A 1 25 CYS 25 42 42 CYS CYS E . n A 1 26 GLY 26 43 43 GLY GLY E . n A 1 27 GLY 27 44 44 GLY GLY E . n A 1 28 SER 28 45 45 SER SER E . n A 1 29 LEU 29 46 46 LEU LEU E . n A 1 30 ILE 30 47 47 ILE ILE E . n A 1 31 ASN 31 48 48 ASN ASN E . n A 1 32 SER 32 49 49 SER SER E . n A 1 33 GLN 33 50 50 GLN GLN E . n A 1 34 TRP 34 51 51 TRP TRP E . n A 1 35 VAL 35 52 52 VAL VAL E . n A 1 36 VAL 36 53 53 VAL VAL E . n A 1 37 SER 37 54 54 SER SER E . n A 1 38 ALA 38 55 55 ALA ALA E . n A 1 39 ALA 39 56 56 ALA ALA E . n A 1 40 HIS 40 57 57 HIS HIS E . n A 1 41 CYS 41 58 58 CYS CYS E . n A 1 42 TYR 42 59 59 TYR TYR E . n A 1 43 LYS 43 60 60 LYS LYS E . n A 1 44 SER 44 61 61 SER SER E . n A 1 45 GLY 45 62 62 GLY GLY E . n A 1 46 ILE 46 63 63 ILE ILE E . n A 1 47 GLN 47 64 64 GLN GLN E . n A 1 48 VAL 48 65 65 VAL VAL E . n A 1 49 ARG 49 66 66 ARG ARG E . n A 1 50 LEU 50 67 67 LEU LEU E . n A 1 51 GLY 51 69 69 GLY GLY E . n A 1 52 GLU 52 70 70 GLU GLU E . n A 1 53 ASP 53 71 71 ASP ASP E . n A 1 54 ASN 54 72 72 ASN ASN E . n A 1 55 ILE 55 73 73 ILE ILE E . n A 1 56 ASN 56 74 74 ASN ASN E . n A 1 57 VAL 57 75 75 VAL VAL E . n A 1 58 VAL 58 76 76 VAL VAL E . n A 1 59 GLU 59 77 77 GLU GLU E . n A 1 60 GLY 60 78 78 GLY GLY E . n A 1 61 ASN 61 79 79 ASN ASN E . n A 1 62 GLU 62 80 80 GLU GLU E . n A 1 63 GLN 63 81 81 GLN GLN E . n A 1 64 PHE 64 82 82 PHE PHE E . n A 1 65 ILE 65 83 83 ILE ILE E . n A 1 66 SER 66 84 84 SER SER E . n A 1 67 ALA 67 85 85 ALA ALA E . n A 1 68 SER 68 86 86 SER SER E . n A 1 69 LYS 69 87 87 LYS LYS E . n A 1 70 SER 70 88 88 SER SER E . n A 1 71 ILE 71 89 89 ILE ILE E . n A 1 72 VAL 72 90 90 VAL VAL E . n A 1 73 HIS 73 91 91 HIS HIS E . n A 1 74 PRO 74 92 92 PRO PRO E . n A 1 75 SER 75 93 93 SER SER E . n A 1 76 TYR 76 94 94 TYR TYR E . n A 1 77 ASN 77 95 95 ASN ASN E . n A 1 78 SER 78 96 96 SER SER E . n A 1 79 ASN 79 97 97 ASN ASN E . n A 1 80 THR 80 98 98 THR THR E . n A 1 81 LEU 81 99 99 LEU LEU E . n A 1 82 ASN 82 100 100 ASN ASN E . n A 1 83 ASN 83 101 101 ASN ASN E . n A 1 84 ASP 84 102 102 ASP ASP E . n A 1 85 ILE 85 103 103 ILE ILE E . n A 1 86 MET 86 104 104 MET MET E . n A 1 87 LEU 87 105 105 LEU LEU E . n A 1 88 ILE 88 106 106 ILE ILE E . n A 1 89 LYS 89 107 107 LYS LYS E . n A 1 90 LEU 90 108 108 LEU LEU E . n A 1 91 LYS 91 109 109 LYS LYS E . n A 1 92 SER 92 110 110 SER SER E . n A 1 93 ALA 93 111 111 ALA ALA E . n A 1 94 ALA 94 112 112 ALA ALA E . n A 1 95 SER 95 113 113 SER SER E . n A 1 96 LEU 96 114 114 LEU LEU E . n A 1 97 ASN 97 115 115 ASN ASN E . n A 1 98 SER 98 116 116 SER SER E . n A 1 99 ARG 99 117 117 ARG ARG E . n A 1 100 VAL 100 118 118 VAL VAL E . n A 1 101 ALA 101 119 119 ALA ALA E . n A 1 102 SER 102 120 120 SER SER E . n A 1 103 ILE 103 121 121 ILE ILE E . n A 1 104 SER 104 122 122 SER SER E . n A 1 105 LEU 105 123 123 LEU LEU E . n A 1 106 PRO 106 124 124 PRO PRO E . n A 1 107 THR 107 125 125 THR THR E . n A 1 108 SER 108 127 127 SER SER E . n A 1 109 CYS 109 128 128 CYS CYS E . n A 1 110 ALA 110 129 129 ALA ALA E . n A 1 111 SER 111 130 130 SER SER E . n A 1 112 ALA 112 132 132 ALA ALA E . n A 1 113 GLY 113 133 133 GLY GLY E . n A 1 114 THR 114 134 134 THR THR E . n A 1 115 GLN 115 135 135 GLN GLN E . n A 1 116 CYS 116 136 136 CYS CYS E . n A 1 117 LEU 117 137 137 LEU LEU E . n A 1 118 ILE 118 138 138 ILE ILE E . n A 1 119 SER 119 139 139 SER SER E . n A 1 120 GLY 120 140 140 GLY GLY E . n A 1 121 TRP 121 141 141 TRP TRP E . n A 1 122 GLY 122 142 142 GLY GLY E . n A 1 123 ASN 123 143 143 ASN ASN E . n A 1 124 THR 124 144 144 THR THR E . n A 1 125 LYS 125 145 145 LYS LYS E . n A 1 126 SER 126 146 146 SER SER E . n A 1 127 SER 127 147 147 SER SER E . n A 1 128 GLY 128 148 148 GLY GLY E . n A 1 129 THR 129 149 149 THR THR E . n A 1 130 SER 130 150 150 SER SER E . n A 1 131 TYR 131 151 151 TYR TYR E . n A 1 132 PRO 132 152 152 PRO PRO E . n A 1 133 ASP 133 153 153 ASP ASP E . n A 1 134 VAL 134 154 154 VAL VAL E . n A 1 135 LEU 135 155 155 LEU LEU E . n A 1 136 LYS 136 156 156 LYS LYS E . n A 1 137 CYS 137 157 157 CYS CYS E . n A 1 138 LEU 138 158 158 LEU LEU E . n A 1 139 LYS 139 159 159 LYS LYS E . n A 1 140 ALA 140 160 160 ALA ALA E . n A 1 141 PRO 141 161 161 PRO PRO E . n A 1 142 ILE 142 162 162 ILE ILE E . n A 1 143 LEU 143 163 163 LEU LEU E . n A 1 144 SER 144 164 164 SER SER E . n A 1 145 ASP 145 165 165 ASP ASP E . n A 1 146 SER 146 166 166 SER SER E . n A 1 147 SER 147 167 167 SER SER E . n A 1 148 CYS 148 168 168 CYS CYS E . n A 1 149 LYS 149 169 169 LYS LYS E . n A 1 150 SER 150 170 170 SER SER E . n A 1 151 ALA 151 171 171 ALA ALA E . n A 1 152 TYR 152 172 172 TYR TYR E . n A 1 153 PRO 153 173 173 PRO PRO E . n A 1 154 GLY 154 174 174 GLY GLY E . n A 1 155 GLN 155 175 175 GLN GLN E . n A 1 156 ILE 156 176 176 ILE ILE E . n A 1 157 THR 157 177 177 THR THR E . n A 1 158 SER 158 178 178 SER SER E . n A 1 159 ASN 159 179 179 ASN ASN E . n A 1 160 MET 160 180 180 MET MET E . n A 1 161 PHE 161 181 181 PHE PHE E . n A 1 162 CYS 162 182 182 CYS CYS E . n A 1 163 ALA 163 183 183 ALA ALA E . n A 1 164 GLY 164 184 184 GLY GLY E A n A 1 165 TYR 165 184 184 TYR TYR E . n A 1 166 LEU 166 185 185 LEU LEU E . n A 1 167 GLU 167 186 186 GLU GLU E . n A 1 168 GLY 168 187 187 GLY GLY E . n A 1 169 GLY 169 188 188 GLY GLY E A n A 1 170 LYS 170 188 188 LYS LYS E . n A 1 171 ASP 171 189 189 ASP ASP E . n A 1 172 SER 172 190 190 SER SER E . n A 1 173 CYS 173 191 191 CYS CYS E . n A 1 174 GLN 174 192 192 GLN GLN E . n A 1 175 GLY 175 193 193 GLY GLY E . n A 1 176 ASP 176 194 194 ASP ASP E . n A 1 177 SER 177 195 195 SER SER E . n A 1 178 GLY 178 196 196 GLY GLY E . n A 1 179 GLY 179 197 197 GLY GLY E . n A 1 180 PRO 180 198 198 PRO PRO E . n A 1 181 VAL 181 199 199 VAL VAL E . n A 1 182 VAL 182 200 200 VAL VAL E . n A 1 183 CYS 183 201 201 CYS CYS E . n A 1 184 SER 184 202 202 SER SER E . n A 1 185 GLY 185 203 203 GLY GLY E . n A 1 186 LYS 186 204 204 LYS LYS E . n A 1 187 LEU 187 209 209 LEU LEU E . n A 1 188 GLN 188 210 210 GLN GLN E . n A 1 189 GLY 189 211 211 GLY GLY E . n A 1 190 ILE 190 212 212 ILE ILE E . n A 1 191 VAL 191 213 213 VAL VAL E . n A 1 192 SER 192 214 214 SER SER E . n A 1 193 TRP 193 215 215 TRP TRP E . n A 1 194 GLY 194 216 216 GLY GLY E . n A 1 195 SER 195 217 217 SER SER E . n A 1 196 GLY 196 219 219 GLY GLY E . n A 1 197 CYS 197 220 220 CYS CYS E . n A 1 198 ALA 198 221 221 ALA ALA E A n A 1 199 GLN 199 221 221 GLN GLN E . n A 1 200 LYS 200 222 222 LYS LYS E . n A 1 201 ASN 201 223 223 ASN ASN E . n A 1 202 LYS 202 224 224 LYS LYS E . n A 1 203 PRO 203 225 225 PRO PRO E . n A 1 204 GLY 204 226 226 GLY GLY E . n A 1 205 VAL 205 227 227 VAL VAL E . n A 1 206 TYR 206 228 228 TYR TYR E . n A 1 207 THR 207 229 229 THR THR E . n A 1 208 LYS 208 230 230 LYS LYS E . n A 1 209 VAL 209 231 231 VAL VAL E . n A 1 210 CYS 210 232 232 CYS CYS E . n A 1 211 ASN 211 233 233 ASN ASN E . n A 1 212 TYR 212 234 234 TYR TYR E . n A 1 213 VAL 213 235 235 VAL VAL E . n A 1 214 SER 214 236 236 SER SER E . n A 1 215 TRP 215 237 237 TRP TRP E . n A 1 216 ILE 216 238 238 ILE ILE E . n A 1 217 LYS 217 239 239 LYS LYS E . n A 1 218 GLN 218 240 240 GLN GLN E . n A 1 219 THR 219 241 241 THR THR E . n A 1 220 ILE 220 242 242 ILE ILE E . n A 1 221 ALA 221 243 243 ALA ALA E . n A 1 222 SER 222 244 244 SER SER E . n A 1 223 ASN 223 245 245 ASN ASN E . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 246 224 CA CA E . C 3 SO4 1 578 578 SO4 SO4 E . D 4 0ZG 1 1 1 0ZG TOS E . E 5 HOH 1 579 225 HOH HOH E . E 5 HOH 2 580 226 HOH HOH E . E 5 HOH 3 581 227 HOH HOH E . E 5 HOH 4 582 228 HOH HOH E . E 5 HOH 5 583 229 HOH HOH E . E 5 HOH 6 584 230 HOH HOH E . E 5 HOH 7 585 231 HOH HOH E . E 5 HOH 8 586 232 HOH HOH E . E 5 HOH 9 587 233 HOH HOH E . E 5 HOH 10 588 234 HOH HOH E . E 5 HOH 11 589 235 HOH HOH E . E 5 HOH 12 590 236 HOH HOH E . E 5 HOH 13 591 237 HOH HOH E . E 5 HOH 14 592 238 HOH HOH E . E 5 HOH 15 593 239 HOH HOH E . E 5 HOH 16 594 240 HOH HOH E . E 5 HOH 17 595 241 HOH HOH E . E 5 HOH 18 596 242 HOH HOH E . E 5 HOH 19 597 243 HOH HOH E . E 5 HOH 20 598 244 HOH HOH E . E 5 HOH 21 599 245 HOH HOH E . E 5 HOH 22 600 246 HOH HOH E . E 5 HOH 23 601 247 HOH HOH E . E 5 HOH 24 602 248 HOH HOH E . E 5 HOH 25 603 249 HOH HOH E . E 5 HOH 26 604 250 HOH HOH E . E 5 HOH 27 605 251 HOH HOH E . E 5 HOH 28 606 252 HOH HOH E . E 5 HOH 29 607 253 HOH HOH E . E 5 HOH 30 608 254 HOH HOH E . E 5 HOH 31 609 255 HOH HOH E . E 5 HOH 32 610 256 HOH HOH E . E 5 HOH 33 611 257 HOH HOH E . E 5 HOH 34 612 258 HOH HOH E . E 5 HOH 35 613 259 HOH HOH E . E 5 HOH 36 614 260 HOH HOH E . E 5 HOH 37 615 261 HOH HOH E . E 5 HOH 38 616 262 HOH HOH E . E 5 HOH 39 617 263 HOH HOH E . E 5 HOH 40 618 264 HOH HOH E . E 5 HOH 41 619 265 HOH HOH E . E 5 HOH 42 620 266 HOH HOH E . E 5 HOH 43 621 267 HOH HOH E . E 5 HOH 44 622 268 HOH HOH E . E 5 HOH 45 623 269 HOH HOH E . E 5 HOH 46 624 270 HOH HOH E . E 5 HOH 47 625 271 HOH HOH E . E 5 HOH 48 626 272 HOH HOH E . E 5 HOH 49 627 273 HOH HOH E . E 5 HOH 50 628 274 HOH HOH E . E 5 HOH 51 629 275 HOH HOH E . E 5 HOH 52 630 276 HOH HOH E . E 5 HOH 53 631 277 HOH HOH E . E 5 HOH 54 632 278 HOH HOH E . E 5 HOH 55 633 279 HOH HOH E . E 5 HOH 56 634 280 HOH HOH E . E 5 HOH 57 635 281 HOH HOH E . E 5 HOH 58 636 282 HOH HOH E . E 5 HOH 59 637 283 HOH HOH E . E 5 HOH 60 638 284 HOH HOH E . E 5 HOH 61 639 285 HOH HOH E . E 5 HOH 62 640 286 HOH HOH E . E 5 HOH 63 641 287 HOH HOH E . E 5 HOH 64 642 288 HOH HOH E . E 5 HOH 65 643 289 HOH HOH E . E 5 HOH 66 644 290 HOH HOH E . E 5 HOH 67 645 291 HOH HOH E . E 5 HOH 68 646 292 HOH HOH E . E 5 HOH 69 647 293 HOH HOH E . E 5 HOH 70 648 294 HOH HOH E . E 5 HOH 71 649 295 HOH HOH E . E 5 HOH 72 650 296 HOH HOH E . E 5 HOH 73 651 297 HOH HOH E . E 5 HOH 74 652 298 HOH HOH E . E 5 HOH 75 653 299 HOH HOH E . E 5 HOH 76 654 300 HOH HOH E . E 5 HOH 77 655 301 HOH HOH E . E 5 HOH 78 656 302 HOH HOH E . E 5 HOH 79 657 303 HOH HOH E . E 5 HOH 80 658 304 HOH HOH E . E 5 HOH 81 659 305 HOH HOH E . E 5 HOH 82 660 306 HOH HOH E . E 5 HOH 83 661 307 HOH HOH E . E 5 HOH 84 662 308 HOH HOH E . E 5 HOH 85 663 309 HOH HOH E . E 5 HOH 86 664 310 HOH HOH E . E 5 HOH 87 665 311 HOH HOH E . E 5 HOH 88 666 312 HOH HOH E . E 5 HOH 89 667 313 HOH HOH E . E 5 HOH 90 668 314 HOH HOH E . E 5 HOH 91 669 315 HOH HOH E . E 5 HOH 92 670 316 HOH HOH E . E 5 HOH 93 671 317 HOH HOH E . E 5 HOH 94 672 318 HOH HOH E . E 5 HOH 95 673 319 HOH HOH E . E 5 HOH 96 674 320 HOH HOH E . E 5 HOH 97 675 321 HOH HOH E . E 5 HOH 98 676 322 HOH HOH E . E 5 HOH 99 677 323 HOH HOH E . E 5 HOH 100 678 324 HOH HOH E . E 5 HOH 101 679 325 HOH HOH E . E 5 HOH 102 680 326 HOH HOH E . E 5 HOH 103 681 327 HOH HOH E . E 5 HOH 104 682 328 HOH HOH E . E 5 HOH 105 683 329 HOH HOH E . E 5 HOH 106 684 330 HOH HOH E . E 5 HOH 107 685 331 HOH HOH E . E 5 HOH 108 686 332 HOH HOH E . E 5 HOH 109 687 333 HOH HOH E . E 5 HOH 110 688 334 HOH HOH E . E 5 HOH 111 689 335 HOH HOH E . E 5 HOH 112 690 336 HOH HOH E . E 5 HOH 113 691 337 HOH HOH E . E 5 HOH 114 692 338 HOH HOH E . E 5 HOH 115 693 339 HOH HOH E . E 5 HOH 116 694 340 HOH HOH E . E 5 HOH 117 695 341 HOH HOH E . E 5 HOH 118 696 342 HOH HOH E . E 5 HOH 119 697 343 HOH HOH E . E 5 HOH 120 698 344 HOH HOH E . E 5 HOH 121 699 345 HOH HOH E . E 5 HOH 122 700 346 HOH HOH E . E 5 HOH 123 701 347 HOH HOH E . E 5 HOH 124 702 348 HOH HOH E . E 5 HOH 125 703 349 HOH HOH E . E 5 HOH 126 704 350 HOH HOH E . E 5 HOH 127 705 351 HOH HOH E . E 5 HOH 128 706 352 HOH HOH E . E 5 HOH 129 707 353 HOH HOH E . E 5 HOH 130 708 354 HOH HOH E . E 5 HOH 131 709 355 HOH HOH E . E 5 HOH 132 710 356 HOH HOH E . E 5 HOH 133 711 357 HOH HOH E . E 5 HOH 134 712 358 HOH HOH E . E 5 HOH 135 713 359 HOH HOH E . E 5 HOH 136 714 360 HOH HOH E . E 5 HOH 137 715 361 HOH HOH E . E 5 HOH 138 716 362 HOH HOH E . E 5 HOH 139 717 363 HOH HOH E . E 5 HOH 140 718 364 HOH HOH E . E 5 HOH 141 719 365 HOH HOH E . E 5 HOH 142 720 375 HOH HOH E . E 5 HOH 143 721 379 HOH HOH E . E 5 HOH 144 722 383 HOH HOH E . E 5 HOH 145 723 391 HOH HOH E . E 5 HOH 146 724 392 HOH HOH E . E 5 HOH 147 725 397 HOH HOH E . E 5 HOH 148 726 398 HOH HOH E . E 5 HOH 149 727 402 HOH HOH E . E 5 HOH 150 728 406 HOH HOH E . E 5 HOH 151 729 408 HOH HOH E . E 5 HOH 152 730 411 HOH HOH E . E 5 HOH 153 731 413 HOH HOH E . E 5 HOH 154 732 417 HOH HOH E . E 5 HOH 155 733 419 HOH HOH E . E 5 HOH 156 734 422 HOH HOH E . E 5 HOH 157 735 424 HOH HOH E . E 5 HOH 158 736 429 HOH HOH E . E 5 HOH 159 737 431 HOH HOH E . E 5 HOH 160 738 435 HOH HOH E . E 5 HOH 161 739 436 HOH HOH E . E 5 HOH 162 740 438 HOH HOH E . E 5 HOH 163 741 440 HOH HOH E . E 5 HOH 164 742 444 HOH HOH E . E 5 HOH 165 743 446 HOH HOH E . E 5 HOH 166 744 448 HOH HOH E . E 5 HOH 167 745 449 HOH HOH E . E 5 HOH 168 746 450 HOH HOH E . E 5 HOH 169 747 454 HOH HOH E . E 5 HOH 170 748 459 HOH HOH E . E 5 HOH 171 749 464 HOH HOH E . E 5 HOH 172 750 465 HOH HOH E . E 5 HOH 173 751 466 HOH HOH E . E 5 HOH 174 752 471 HOH HOH E . E 5 HOH 175 753 472 HOH HOH E . E 5 HOH 176 754 473 HOH HOH E . E 5 HOH 177 755 474 HOH HOH E . E 5 HOH 178 756 476 HOH HOH E . E 5 HOH 179 757 478 HOH HOH E . E 5 HOH 180 758 483 HOH HOH E . E 5 HOH 181 759 490 HOH HOH E . E 5 HOH 182 760 491 HOH HOH E . E 5 HOH 183 761 496 HOH HOH E . E 5 HOH 184 762 499 HOH HOH E . E 5 HOH 185 763 501 HOH HOH E . E 5 HOH 186 764 502 HOH HOH E . E 5 HOH 187 765 504 HOH HOH E . E 5 HOH 188 766 505 HOH HOH E . E 5 HOH 189 767 506 HOH HOH E . E 5 HOH 190 768 508 HOH HOH E . E 5 HOH 191 769 516 HOH HOH E . E 5 HOH 192 770 519 HOH HOH E . E 5 HOH 193 771 521 HOH HOH E . E 5 HOH 194 772 524 HOH HOH E . E 5 HOH 195 773 525 HOH HOH E . E 5 HOH 196 774 530 HOH HOH E . E 5 HOH 197 775 540 HOH HOH E . E 5 HOH 198 776 546 HOH HOH E . E 5 HOH 199 777 547 HOH HOH E . E 5 HOH 200 778 550 HOH HOH E . E 5 HOH 201 779 554 HOH HOH E . E 5 HOH 202 780 558 HOH HOH E . E 5 HOH 203 781 560 HOH HOH E . E 5 HOH 204 782 562 HOH HOH E . E 5 HOH 205 783 563 HOH HOH E . E 5 HOH 206 784 564 HOH HOH E . E 5 HOH 207 785 565 HOH HOH E . E 5 HOH 208 786 566 HOH HOH E . E 5 HOH 209 787 567 HOH HOH E . E 5 HOH 210 788 569 HOH HOH E . E 5 HOH 211 789 570 HOH HOH E . E 5 HOH 212 790 571 HOH HOH E . E 5 HOH 213 791 574 HOH HOH E . E 5 HOH 214 792 576 HOH HOH E . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 X-PLOR refinement . ? 2 X-PLOR phasing . ? 3 # _cell.entry_id 1PPH _cell.length_a 63.510 _cell.length_b 69.190 _cell.length_c 63.810 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1PPH _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # _exptl.entry_id 1PPH _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.00 _exptl_crystal.density_percent_sol 59.06 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.entry_id 1PPH _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.0 _refine.ls_d_res_high 1.9 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.167 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.167 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1629 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 36 _refine_hist.number_atoms_solvent 214 _refine_hist.number_atoms_total 1879 _refine_hist.d_res_high 1.9 _refine_hist.d_res_low 8.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.011 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 2.43 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1PPH _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1PPH _struct.title ;GEOMETRY OF BINDING OF THE NALPHA-TOSYLATED PIPERIDIDES OF M-AMIDINO-, P-AMIDINO-AND P-GUANIDINO PHENYLALANINE TO THROMBIN AND TRYPSIN: X-RAY CRYSTAL STRUCTURES OF THEIR TRYPSIN COMPLEXES AND MODELING OF THEIR THROMBIN COMPLEXES ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1PPH _struct_keywords.pdbx_keywords 'HYDROLASE/hydrolase inhibitor' _struct_keywords.text 'SERINE PROTEINASE, HYDROLASE-hydrolase inhibitor complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TRY1_BOVIN _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P00760 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;FIFLALLGAAVAFPVDDDDKIVGGYTCGANTVPYQVSLNSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVEG NEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKA PILSDSSCKSAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVCSGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTI ASN ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1PPH _struct_ref_seq.pdbx_strand_id E _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 223 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00760 _struct_ref_seq.db_align_beg 21 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 243 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 16 _struct_ref_seq.pdbx_auth_seq_align_end 245 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 38 ? TYR A 42 ? ALA E 55 TYR E 59 5 ? 5 HELX_P HELX_P2 2 SER A 144 ? TYR A 152 ? SER E 164 TYR E 172 1 ? 9 HELX_P HELX_P3 3 TYR A 212 ? SER A 222 ? TYR E 234 SER E 244 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 7 SG ? ? ? 1_555 A CYS 137 SG ? ? E CYS 22 E CYS 157 1_555 ? ? ? ? ? ? ? 2.014 ? ? disulf2 disulf ? ? A CYS 25 SG ? ? ? 1_555 A CYS 41 SG ? ? E CYS 42 E CYS 58 1_555 ? ? ? ? ? ? ? 2.017 ? ? disulf3 disulf ? ? A CYS 109 SG ? ? ? 1_555 A CYS 210 SG ? ? E CYS 128 E CYS 232 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf4 disulf ? ? A CYS 116 SG ? ? ? 1_555 A CYS 183 SG ? ? E CYS 136 E CYS 201 1_555 ? ? ? ? ? ? ? 2.025 ? ? disulf5 disulf ? ? A CYS 148 SG ? ? ? 1_555 A CYS 162 SG ? ? E CYS 168 E CYS 182 1_555 ? ? ? ? ? ? ? 2.005 ? ? disulf6 disulf ? ? A CYS 173 SG ? ? ? 1_555 A CYS 197 SG ? ? E CYS 191 E CYS 220 1_555 ? ? ? ? ? ? ? 2.036 ? ? metalc1 metalc ? ? A GLU 52 OE1 ? ? ? 1_555 B CA . CA ? ? E GLU 70 E CA 246 1_555 ? ? ? ? ? ? ? 2.446 ? ? metalc2 metalc ? ? A ASN 54 O ? ? ? 1_555 B CA . CA ? ? E ASN 72 E CA 246 1_555 ? ? ? ? ? ? ? 2.372 ? ? metalc3 metalc ? ? A VAL 57 O ? ? ? 1_555 B CA . CA ? ? E VAL 75 E CA 246 1_555 ? ? ? ? ? ? ? 2.298 ? ? metalc4 metalc ? ? A GLU 62 OE2 ? ? ? 1_555 B CA . CA ? ? E GLU 80 E CA 246 1_555 ? ? ? ? ? ? ? 2.543 ? ? metalc5 metalc ? ? B CA . CA ? ? ? 1_555 E HOH . O ? ? E CA 246 E HOH 600 1_555 ? ? ? ? ? ? ? 2.296 ? ? metalc6 metalc ? ? B CA . CA ? ? ? 1_555 E HOH . O ? ? E CA 246 E HOH 617 1_555 ? ? ? ? ? ? ? 2.323 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE1 ? A GLU 52 ? E GLU 70 ? 1_555 CA ? B CA . ? E CA 246 ? 1_555 O ? A ASN 54 ? E ASN 72 ? 1_555 94.7 ? 2 OE1 ? A GLU 52 ? E GLU 70 ? 1_555 CA ? B CA . ? E CA 246 ? 1_555 O ? A VAL 57 ? E VAL 75 ? 1_555 161.7 ? 3 O ? A ASN 54 ? E ASN 72 ? 1_555 CA ? B CA . ? E CA 246 ? 1_555 O ? A VAL 57 ? E VAL 75 ? 1_555 83.8 ? 4 OE1 ? A GLU 52 ? E GLU 70 ? 1_555 CA ? B CA . ? E CA 246 ? 1_555 OE2 ? A GLU 62 ? E GLU 80 ? 1_555 97.2 ? 5 O ? A ASN 54 ? E ASN 72 ? 1_555 CA ? B CA . ? E CA 246 ? 1_555 OE2 ? A GLU 62 ? E GLU 80 ? 1_555 155.5 ? 6 O ? A VAL 57 ? E VAL 75 ? 1_555 CA ? B CA . ? E CA 246 ? 1_555 OE2 ? A GLU 62 ? E GLU 80 ? 1_555 91.3 ? 7 OE1 ? A GLU 52 ? E GLU 70 ? 1_555 CA ? B CA . ? E CA 246 ? 1_555 O ? E HOH . ? E HOH 600 ? 1_555 84.6 ? 8 O ? A ASN 54 ? E ASN 72 ? 1_555 CA ? B CA . ? E CA 246 ? 1_555 O ? E HOH . ? E HOH 600 ? 1_555 88.0 ? 9 O ? A VAL 57 ? E VAL 75 ? 1_555 CA ? B CA . ? E CA 246 ? 1_555 O ? E HOH . ? E HOH 600 ? 1_555 113.6 ? 10 OE2 ? A GLU 62 ? E GLU 80 ? 1_555 CA ? B CA . ? E CA 246 ? 1_555 O ? E HOH . ? E HOH 600 ? 1_555 72.0 ? 11 OE1 ? A GLU 52 ? E GLU 70 ? 1_555 CA ? B CA . ? E CA 246 ? 1_555 O ? E HOH . ? E HOH 617 ? 1_555 79.0 ? 12 O ? A ASN 54 ? E ASN 72 ? 1_555 CA ? B CA . ? E CA 246 ? 1_555 O ? E HOH . ? E HOH 617 ? 1_555 107.5 ? 13 O ? A VAL 57 ? E VAL 75 ? 1_555 CA ? B CA . ? E CA 246 ? 1_555 O ? E HOH . ? E HOH 617 ? 1_555 84.0 ? 14 OE2 ? A GLU 62 ? E GLU 80 ? 1_555 CA ? B CA . ? E CA 246 ? 1_555 O ? E HOH . ? E HOH 617 ? 1_555 95.8 ? 15 O ? E HOH . ? E HOH 600 ? 1_555 CA ? B CA . ? E CA 246 ? 1_555 O ? E HOH . ? E HOH 617 ? 1_555 158.2 ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 7 ? CYS A 137 ? CYS E 22 ? 1_555 CYS E 157 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 25 ? CYS A 41 ? CYS E 42 ? 1_555 CYS E 58 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS A 109 ? CYS A 210 ? CYS E 128 ? 1_555 CYS E 232 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS A 116 ? CYS A 183 ? CYS E 136 ? 1_555 CYS E 201 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS A 148 ? CYS A 162 ? CYS E 168 ? 1_555 CYS E 182 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS A 173 ? CYS A 197 ? CYS E 191 ? 1_555 CYS E 220 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 5 ? THR A 6 ? TYR E 20 THR E 21 A 2 LYS A 136 ? PRO A 141 ? LYS E 156 PRO E 161 A 3 GLN A 115 ? GLY A 120 ? GLN E 135 GLY E 140 A 4 PRO A 180 ? CYS A 183 ? PRO E 198 CYS E 201 A 5 LYS A 186 ? TRP A 193 ? LYS E 204 TRP E 215 A 6 GLY A 204 ? LYS A 208 ? GLY E 226 LYS E 230 A 7 MET A 160 ? ALA A 163 ? MET E 180 ALA E 183 B 1 GLN A 15 ? ASN A 19 ? GLN E 30 ASN E 34 B 2 HIS A 23 ? ASN A 31 ? HIS E 40 ASN E 48 B 3 TRP A 34 ? SER A 37 ? TRP E 51 SER E 54 B 4 MET A 86 ? LEU A 90 ? MET E 104 LEU E 108 B 5 GLN A 63 ? VAL A 72 ? GLN E 81 VAL E 90 B 6 GLN A 47 ? LEU A 50 ? GLN E 64 LEU E 67 B 7 GLN A 15 ? ASN A 19 ? GLN E 30 ASN E 34 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O TYR A 5 ? O TYR E 20 N CYS A 137 ? N CYS E 157 A 2 3 O ALA A 140 ? O ALA E 160 N CYS A 116 ? N CYS E 136 A 3 4 N SER A 119 ? N SER E 139 O PRO A 180 ? O PRO E 198 A 4 5 N CYS A 183 ? N CYS E 201 O LYS A 186 ? O LYS E 204 A 5 6 O TRP A 193 ? O TRP E 215 N VAL A 205 ? N VAL E 227 A 6 7 N TYR A 206 ? N TYR E 228 O PHE A 161 ? O PHE E 181 B 1 2 O LEU A 18 ? O LEU E 33 N PHE A 24 ? N PHE E 41 B 2 3 N ILE A 30 ? N ILE E 47 O TRP A 34 ? O TRP E 51 B 3 4 N SER A 37 ? N SER E 54 O MET A 86 ? O MET E 104 B 4 5 O LYS A 89 ? O LYS E 107 N SER A 68 ? N SER E 86 B 5 6 O ILE A 65 ? O ILE E 83 N VAL A 48 ? N VAL E 65 B 6 7 N ARG A 49 ? N ARG E 66 O SER A 17 ? O SER E 32 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software E CA 246 ? 6 'BINDING SITE FOR RESIDUE CA E 246' AC2 Software E SO4 578 ? 7 'BINDING SITE FOR RESIDUE SO4 E 578' AC3 Software E 0ZG 1 ? 9 'BINDING SITE FOR RESIDUE 0ZG E 1' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 GLU A 52 ? GLU E 70 . ? 1_555 ? 2 AC1 6 ASN A 54 ? ASN E 72 . ? 1_555 ? 3 AC1 6 VAL A 57 ? VAL E 75 . ? 1_555 ? 4 AC1 6 GLU A 62 ? GLU E 80 . ? 1_555 ? 5 AC1 6 HOH E . ? HOH E 600 . ? 1_555 ? 6 AC1 6 HOH E . ? HOH E 617 . ? 1_555 ? 7 AC2 7 LYS A 149 ? LYS E 169 . ? 1_555 ? 8 AC2 7 PRO A 153 ? PRO E 173 . ? 1_555 ? 9 AC2 7 GLY A 154 ? GLY E 174 . ? 1_555 ? 10 AC2 7 GLN A 218 ? GLN E 240 . ? 4_456 ? 11 AC2 7 HOH E . ? HOH E 607 . ? 1_555 ? 12 AC2 7 HOH E . ? HOH E 767 . ? 4_456 ? 13 AC2 7 HOH E . ? HOH E 786 . ? 1_555 ? 14 AC3 9 ASP A 171 ? ASP E 189 . ? 1_555 ? 15 AC3 9 SER A 172 ? SER E 190 . ? 1_555 ? 16 AC3 9 SER A 192 ? SER E 214 . ? 1_555 ? 17 AC3 9 TRP A 193 ? TRP E 215 . ? 1_555 ? 18 AC3 9 GLY A 194 ? GLY E 216 . ? 1_555 ? 19 AC3 9 SER A 195 ? SER E 217 . ? 1_555 ? 20 AC3 9 GLY A 196 ? GLY E 219 . ? 1_555 ? 21 AC3 9 GLY A 204 ? GLY E 226 . ? 1_555 ? 22 AC3 9 HOH E . ? HOH E 589 . ? 1_555 ? # _pdbx_entry_details.entry_id 1PPH _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;3-TAPAP, A SYNTHETIC THROMBIN INHIBITOR, IS NONCOVALENTLY BOUND TO THE ACTIVE SITE. A CALCIUM CAL 480 AND A SULFATE SO4 ARE ADDITIONALLY PRESENT. 3-TAPAP "RESIDUES" (NOMENCLATURE SEE PAPER) ARE TOS I 1, APM I 2, PIP I 3. ; _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 CE E LYS 60 ? ? 1_555 O E HOH 745 ? ? 3_545 1.25 2 1 CG E LEU 67 ? ? 1_555 O E HOH 791 ? ? 2_554 1.53 3 1 CD E LYS 60 ? ? 1_555 O E HOH 745 ? ? 3_545 1.67 4 1 CB E LYS 60 ? ? 1_555 O E HOH 745 ? ? 3_545 1.85 5 1 CG E LYS 60 ? ? 1_555 O E HOH 745 ? ? 3_545 1.88 6 1 O E HOH 621 ? ? 1_555 O E HOH 774 ? ? 3_545 1.95 7 1 O E HOH 621 ? ? 1_555 O E HOH 785 ? ? 2_554 2.02 8 1 CD1 E LEU 67 ? ? 1_555 O E HOH 791 ? ? 2_554 2.08 9 1 O E HOH 654 ? ? 1_555 O E HOH 785 ? ? 4_456 2.10 10 1 O E HOH 689 ? ? 1_555 O E HOH 755 ? ? 3_545 2.16 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CD _pdbx_validate_rmsd_bond.auth_asym_id_1 E _pdbx_validate_rmsd_bond.auth_comp_id_1 GLU _pdbx_validate_rmsd_bond.auth_seq_id_1 186 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OE2 _pdbx_validate_rmsd_bond.auth_asym_id_2 E _pdbx_validate_rmsd_bond.auth_comp_id_2 GLU _pdbx_validate_rmsd_bond.auth_seq_id_2 186 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.324 _pdbx_validate_rmsd_bond.bond_target_value 1.252 _pdbx_validate_rmsd_bond.bond_deviation 0.072 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.011 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CD1 E TRP 51 ? ? CG E TRP 51 ? ? CD2 E TRP 51 ? ? 112.28 106.30 5.98 0.80 N 2 1 CE2 E TRP 51 ? ? CD2 E TRP 51 ? ? CG E TRP 51 ? ? 101.75 107.30 -5.55 0.80 N 3 1 CD1 E TRP 141 ? ? CG E TRP 141 ? ? CD2 E TRP 141 ? ? 112.31 106.30 6.01 0.80 N 4 1 CE2 E TRP 141 ? ? CD2 E TRP 141 ? ? CG E TRP 141 ? ? 102.02 107.30 -5.28 0.80 N 5 1 CD1 E TRP 215 ? ? CG E TRP 215 ? ? CD2 E TRP 215 ? ? 111.93 106.30 5.63 0.80 N 6 1 CE2 E TRP 215 ? ? CD2 E TRP 215 ? ? CG E TRP 215 ? ? 102.48 107.30 -4.82 0.80 N 7 1 CD1 E TRP 237 ? ? CG E TRP 237 ? ? CD2 E TRP 237 ? ? 112.59 106.30 6.29 0.80 N 8 1 CE2 E TRP 237 ? ? CD2 E TRP 237 ? ? CG E TRP 237 ? ? 102.17 107.30 -5.13 0.80 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP E 71 ? ? -116.67 -79.20 2 1 ASN E 79 ? ? 79.70 -2.03 3 1 ASN E 115 ? ? -170.15 -172.56 4 1 SER E 195 ? ? -36.86 132.99 # _pdbx_molecule_features.prd_id PRD_000374 _pdbx_molecule_features.name 4-TAPAP _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000374 _pdbx_molecule.asym_id D # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 0ZG S S N N 1 0ZG O1S O N N 2 0ZG O2S O N N 3 0ZG C1 C Y N 4 0ZG C2 C Y N 5 0ZG C3 C Y N 6 0ZG C4 C Y N 7 0ZG C5 C Y N 8 0ZG C6 C Y N 9 0ZG C C N N 10 0ZG N1 N N N 11 0ZG C21 C N N 12 0ZG C31 C N N 13 0ZG C41 C N N 14 0ZG C51 C N N 15 0ZG C61 C N N 16 0ZG N N N N 17 0ZG CA C N S 18 0ZG C7 C N N 19 0ZG O O N N 20 0ZG CB C N N 21 0ZG CG C Y N 22 0ZG CD1 C Y N 23 0ZG CD2 C Y N 24 0ZG CE1 C Y N 25 0ZG CE2 C Y N 26 0ZG CZ C Y N 27 0ZG CF C N N 28 0ZG NG1 N N N 29 0ZG NG2 N N N 30 0ZG H2 H N N 31 0ZG H3 H N N 32 0ZG H5 H N N 33 0ZG H6 H N N 34 0ZG H1 H N N 35 0ZG H2A H N N 36 0ZG H3A H N N 37 0ZG H21 H N N 38 0ZG H22 H N N 39 0ZG H31 H N N 40 0ZG H32 H N N 41 0ZG H41 H N N 42 0ZG H42 H N N 43 0ZG H51 H N N 44 0ZG H52 H N N 45 0ZG H61 H N N 46 0ZG H62 H N N 47 0ZG H H N N 48 0ZG HA H N N 49 0ZG HB2 H N N 50 0ZG HB3 H N N 51 0ZG HD1 H N N 52 0ZG HD2 H N N 53 0ZG HE2 H N N 54 0ZG HZ H N N 55 0ZG HG1 H N N 56 0ZG HG21 H N N 57 0ZG HG22 H N N 58 ALA N N N N 59 ALA CA C N S 60 ALA C C N N 61 ALA O O N N 62 ALA CB C N N 63 ALA OXT O N N 64 ALA H H N N 65 ALA H2 H N N 66 ALA HA H N N 67 ALA HB1 H N N 68 ALA HB2 H N N 69 ALA HB3 H N N 70 ALA HXT H N N 71 ARG N N N N 72 ARG CA C N S 73 ARG C C N N 74 ARG O O N N 75 ARG CB C N N 76 ARG CG C N N 77 ARG CD C N N 78 ARG NE N N N 79 ARG CZ C N N 80 ARG NH1 N N N 81 ARG NH2 N N N 82 ARG OXT O N N 83 ARG H H N N 84 ARG H2 H N N 85 ARG HA H N N 86 ARG HB2 H N N 87 ARG HB3 H N N 88 ARG HG2 H N N 89 ARG HG3 H N N 90 ARG HD2 H N N 91 ARG HD3 H N N 92 ARG HE H N N 93 ARG HH11 H N N 94 ARG HH12 H N N 95 ARG HH21 H N N 96 ARG HH22 H N N 97 ARG HXT H N N 98 ASN N N N N 99 ASN CA C N S 100 ASN C C N N 101 ASN O O N N 102 ASN CB C N N 103 ASN CG C N N 104 ASN OD1 O N N 105 ASN ND2 N N N 106 ASN OXT O N N 107 ASN H H N N 108 ASN H2 H N N 109 ASN HA H N N 110 ASN HB2 H N N 111 ASN HB3 H N N 112 ASN HD21 H N N 113 ASN HD22 H N N 114 ASN HXT H N N 115 ASP N N N N 116 ASP CA C N S 117 ASP C C N N 118 ASP O O N N 119 ASP CB C N N 120 ASP CG C N N 121 ASP OD1 O N N 122 ASP OD2 O N N 123 ASP OXT O N N 124 ASP H H N N 125 ASP H2 H N N 126 ASP HA H N N 127 ASP HB2 H N N 128 ASP HB3 H N N 129 ASP HD2 H N N 130 ASP HXT H N N 131 CA CA CA N N 132 CYS N N N N 133 CYS CA C N R 134 CYS C C N N 135 CYS O O N N 136 CYS CB C N N 137 CYS SG S N N 138 CYS OXT O N N 139 CYS H H N N 140 CYS H2 H N N 141 CYS HA H N N 142 CYS HB2 H N N 143 CYS HB3 H N N 144 CYS HG H N N 145 CYS HXT H N N 146 GLN N N N N 147 GLN CA C N S 148 GLN C C N N 149 GLN O O N N 150 GLN CB C N N 151 GLN CG C N N 152 GLN CD C N N 153 GLN OE1 O N N 154 GLN NE2 N N N 155 GLN OXT O N N 156 GLN H H N N 157 GLN H2 H N N 158 GLN HA H N N 159 GLN HB2 H N N 160 GLN HB3 H N N 161 GLN HG2 H N N 162 GLN HG3 H N N 163 GLN HE21 H N N 164 GLN HE22 H N N 165 GLN HXT H N N 166 GLU N N N N 167 GLU CA C N S 168 GLU C C N N 169 GLU O O N N 170 GLU CB C N N 171 GLU CG C N N 172 GLU CD C N N 173 GLU OE1 O N N 174 GLU OE2 O N N 175 GLU OXT O N N 176 GLU H H N N 177 GLU H2 H N N 178 GLU HA H N N 179 GLU HB2 H N N 180 GLU HB3 H N N 181 GLU HG2 H N N 182 GLU HG3 H N N 183 GLU HE2 H N N 184 GLU HXT H N N 185 GLY N N N N 186 GLY CA C N N 187 GLY C C N N 188 GLY O O N N 189 GLY OXT O N N 190 GLY H H N N 191 GLY H2 H N N 192 GLY HA2 H N N 193 GLY HA3 H N N 194 GLY HXT H N N 195 HIS N N N N 196 HIS CA C N S 197 HIS C C N N 198 HIS O O N N 199 HIS CB C N N 200 HIS CG C Y N 201 HIS ND1 N Y N 202 HIS CD2 C Y N 203 HIS CE1 C Y N 204 HIS NE2 N Y N 205 HIS OXT O N N 206 HIS H H N N 207 HIS H2 H N N 208 HIS HA H N N 209 HIS HB2 H N N 210 HIS HB3 H N N 211 HIS HD1 H N N 212 HIS HD2 H N N 213 HIS HE1 H N N 214 HIS HE2 H N N 215 HIS HXT H N N 216 HOH O O N N 217 HOH H1 H N N 218 HOH H2 H N N 219 ILE N N N N 220 ILE CA C N S 221 ILE C C N N 222 ILE O O N N 223 ILE CB C N S 224 ILE CG1 C N N 225 ILE CG2 C N N 226 ILE CD1 C N N 227 ILE OXT O N N 228 ILE H H N N 229 ILE H2 H N N 230 ILE HA H N N 231 ILE HB H N N 232 ILE HG12 H N N 233 ILE HG13 H N N 234 ILE HG21 H N N 235 ILE HG22 H N N 236 ILE HG23 H N N 237 ILE HD11 H N N 238 ILE HD12 H N N 239 ILE HD13 H N N 240 ILE HXT H N N 241 LEU N N N N 242 LEU CA C N S 243 LEU C C N N 244 LEU O O N N 245 LEU CB C N N 246 LEU CG C N N 247 LEU CD1 C N N 248 LEU CD2 C N N 249 LEU OXT O N N 250 LEU H H N N 251 LEU H2 H N N 252 LEU HA H N N 253 LEU HB2 H N N 254 LEU HB3 H N N 255 LEU HG H N N 256 LEU HD11 H N N 257 LEU HD12 H N N 258 LEU HD13 H N N 259 LEU HD21 H N N 260 LEU HD22 H N N 261 LEU HD23 H N N 262 LEU HXT H N N 263 LYS N N N N 264 LYS CA C N S 265 LYS C C N N 266 LYS O O N N 267 LYS CB C N N 268 LYS CG C N N 269 LYS CD C N N 270 LYS CE C N N 271 LYS NZ N N N 272 LYS OXT O N N 273 LYS H H N N 274 LYS H2 H N N 275 LYS HA H N N 276 LYS HB2 H N N 277 LYS HB3 H N N 278 LYS HG2 H N N 279 LYS HG3 H N N 280 LYS HD2 H N N 281 LYS HD3 H N N 282 LYS HE2 H N N 283 LYS HE3 H N N 284 LYS HZ1 H N N 285 LYS HZ2 H N N 286 LYS HZ3 H N N 287 LYS HXT H N N 288 MET N N N N 289 MET CA C N S 290 MET C C N N 291 MET O O N N 292 MET CB C N N 293 MET CG C N N 294 MET SD S N N 295 MET CE C N N 296 MET OXT O N N 297 MET H H N N 298 MET H2 H N N 299 MET HA H N N 300 MET HB2 H N N 301 MET HB3 H N N 302 MET HG2 H N N 303 MET HG3 H N N 304 MET HE1 H N N 305 MET HE2 H N N 306 MET HE3 H N N 307 MET HXT H N N 308 PHE N N N N 309 PHE CA C N S 310 PHE C C N N 311 PHE O O N N 312 PHE CB C N N 313 PHE CG C Y N 314 PHE CD1 C Y N 315 PHE CD2 C Y N 316 PHE CE1 C Y N 317 PHE CE2 C Y N 318 PHE CZ C Y N 319 PHE OXT O N N 320 PHE H H N N 321 PHE H2 H N N 322 PHE HA H N N 323 PHE HB2 H N N 324 PHE HB3 H N N 325 PHE HD1 H N N 326 PHE HD2 H N N 327 PHE HE1 H N N 328 PHE HE2 H N N 329 PHE HZ H N N 330 PHE HXT H N N 331 PRO N N N N 332 PRO CA C N S 333 PRO C C N N 334 PRO O O N N 335 PRO CB C N N 336 PRO CG C N N 337 PRO CD C N N 338 PRO OXT O N N 339 PRO H H N N 340 PRO HA H N N 341 PRO HB2 H N N 342 PRO HB3 H N N 343 PRO HG2 H N N 344 PRO HG3 H N N 345 PRO HD2 H N N 346 PRO HD3 H N N 347 PRO HXT H N N 348 SER N N N N 349 SER CA C N S 350 SER C C N N 351 SER O O N N 352 SER CB C N N 353 SER OG O N N 354 SER OXT O N N 355 SER H H N N 356 SER H2 H N N 357 SER HA H N N 358 SER HB2 H N N 359 SER HB3 H N N 360 SER HG H N N 361 SER HXT H N N 362 SO4 S S N N 363 SO4 O1 O N N 364 SO4 O2 O N N 365 SO4 O3 O N N 366 SO4 O4 O N N 367 THR N N N N 368 THR CA C N S 369 THR C C N N 370 THR O O N N 371 THR CB C N R 372 THR OG1 O N N 373 THR CG2 C N N 374 THR OXT O N N 375 THR H H N N 376 THR H2 H N N 377 THR HA H N N 378 THR HB H N N 379 THR HG1 H N N 380 THR HG21 H N N 381 THR HG22 H N N 382 THR HG23 H N N 383 THR HXT H N N 384 TRP N N N N 385 TRP CA C N S 386 TRP C C N N 387 TRP O O N N 388 TRP CB C N N 389 TRP CG C Y N 390 TRP CD1 C Y N 391 TRP CD2 C Y N 392 TRP NE1 N Y N 393 TRP CE2 C Y N 394 TRP CE3 C Y N 395 TRP CZ2 C Y N 396 TRP CZ3 C Y N 397 TRP CH2 C Y N 398 TRP OXT O N N 399 TRP H H N N 400 TRP H2 H N N 401 TRP HA H N N 402 TRP HB2 H N N 403 TRP HB3 H N N 404 TRP HD1 H N N 405 TRP HE1 H N N 406 TRP HE3 H N N 407 TRP HZ2 H N N 408 TRP HZ3 H N N 409 TRP HH2 H N N 410 TRP HXT H N N 411 TYR N N N N 412 TYR CA C N S 413 TYR C C N N 414 TYR O O N N 415 TYR CB C N N 416 TYR CG C Y N 417 TYR CD1 C Y N 418 TYR CD2 C Y N 419 TYR CE1 C Y N 420 TYR CE2 C Y N 421 TYR CZ C Y N 422 TYR OH O N N 423 TYR OXT O N N 424 TYR H H N N 425 TYR H2 H N N 426 TYR HA H N N 427 TYR HB2 H N N 428 TYR HB3 H N N 429 TYR HD1 H N N 430 TYR HD2 H N N 431 TYR HE1 H N N 432 TYR HE2 H N N 433 TYR HH H N N 434 TYR HXT H N N 435 VAL N N N N 436 VAL CA C N S 437 VAL C C N N 438 VAL O O N N 439 VAL CB C N N 440 VAL CG1 C N N 441 VAL CG2 C N N 442 VAL OXT O N N 443 VAL H H N N 444 VAL H2 H N N 445 VAL HA H N N 446 VAL HB H N N 447 VAL HG11 H N N 448 VAL HG12 H N N 449 VAL HG13 H N N 450 VAL HG21 H N N 451 VAL HG22 H N N 452 VAL HG23 H N N 453 VAL HXT H N N 454 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0ZG S O1S doub N N 1 0ZG S C1 sing N N 2 0ZG C1 C2 doub Y N 3 0ZG C1 C6 sing Y N 4 0ZG C2 C3 sing Y N 5 0ZG C2 H2 sing N N 6 0ZG C3 C4 doub Y N 7 0ZG C3 H3 sing N N 8 0ZG C4 C5 sing Y N 9 0ZG C4 C sing N N 10 0ZG C5 C6 doub Y N 11 0ZG C5 H5 sing N N 12 0ZG C6 H6 sing N N 13 0ZG C H1 sing N N 14 0ZG C H2A sing N N 15 0ZG C H3A sing N N 16 0ZG N1 C21 sing N N 17 0ZG N1 C61 sing N N 18 0ZG C21 C31 sing N N 19 0ZG C21 H21 sing N N 20 0ZG C21 H22 sing N N 21 0ZG C31 C41 sing N N 22 0ZG C31 H31 sing N N 23 0ZG C31 H32 sing N N 24 0ZG C41 C51 sing N N 25 0ZG C41 H41 sing N N 26 0ZG C41 H42 sing N N 27 0ZG C51 C61 sing N N 28 0ZG C51 H51 sing N N 29 0ZG C51 H52 sing N N 30 0ZG C61 H61 sing N N 31 0ZG C61 H62 sing N N 32 0ZG N CA sing N N 33 0ZG N H sing N N 34 0ZG CA C7 sing N N 35 0ZG CA CB sing N N 36 0ZG CA HA sing N N 37 0ZG C7 O doub N N 38 0ZG CB CG sing N N 39 0ZG CB HB2 sing N N 40 0ZG CB HB3 sing N N 41 0ZG CG CD1 doub Y N 42 0ZG CG CD2 sing Y N 43 0ZG CD1 CE1 sing Y N 44 0ZG CD1 HD1 sing N N 45 0ZG CD2 CE2 doub Y N 46 0ZG CD2 HD2 sing N N 47 0ZG CE1 CZ doub Y N 48 0ZG CE1 CF sing N N 49 0ZG CE2 CZ sing Y N 50 0ZG CE2 HE2 sing N N 51 0ZG CZ HZ sing N N 52 0ZG CF NG1 doub N N 53 0ZG CF NG2 sing N N 54 0ZG NG1 HG1 sing N N 55 0ZG NG2 HG21 sing N N 56 0ZG NG2 HG22 sing N N 57 0ZG S N sing N N 58 0ZG N1 C7 sing N N 59 0ZG S O2S doub N N 60 ALA N CA sing N N 61 ALA N H sing N N 62 ALA N H2 sing N N 63 ALA CA C sing N N 64 ALA CA CB sing N N 65 ALA CA HA sing N N 66 ALA C O doub N N 67 ALA C OXT sing N N 68 ALA CB HB1 sing N N 69 ALA CB HB2 sing N N 70 ALA CB HB3 sing N N 71 ALA OXT HXT sing N N 72 ARG N CA sing N N 73 ARG N H sing N N 74 ARG N H2 sing N N 75 ARG CA C sing N N 76 ARG CA CB sing N N 77 ARG CA HA sing N N 78 ARG C O doub N N 79 ARG C OXT sing N N 80 ARG CB CG sing N N 81 ARG CB HB2 sing N N 82 ARG CB HB3 sing N N 83 ARG CG CD sing N N 84 ARG CG HG2 sing N N 85 ARG CG HG3 sing N N 86 ARG CD NE sing N N 87 ARG CD HD2 sing N N 88 ARG CD HD3 sing N N 89 ARG NE CZ sing N N 90 ARG NE HE sing N N 91 ARG CZ NH1 sing N N 92 ARG CZ NH2 doub N N 93 ARG NH1 HH11 sing N N 94 ARG NH1 HH12 sing N N 95 ARG NH2 HH21 sing N N 96 ARG NH2 HH22 sing N N 97 ARG OXT HXT sing N N 98 ASN N CA sing N N 99 ASN N H sing N N 100 ASN N H2 sing N N 101 ASN CA C sing N N 102 ASN CA CB sing N N 103 ASN CA HA sing N N 104 ASN C O doub N N 105 ASN C OXT sing N N 106 ASN CB CG sing N N 107 ASN CB HB2 sing N N 108 ASN CB HB3 sing N N 109 ASN CG OD1 doub N N 110 ASN CG ND2 sing N N 111 ASN ND2 HD21 sing N N 112 ASN ND2 HD22 sing N N 113 ASN OXT HXT sing N N 114 ASP N CA sing N N 115 ASP N H sing N N 116 ASP N H2 sing N N 117 ASP CA C sing N N 118 ASP CA CB sing N N 119 ASP CA HA sing N N 120 ASP C O doub N N 121 ASP C OXT sing N N 122 ASP CB CG sing N N 123 ASP CB HB2 sing N N 124 ASP CB HB3 sing N N 125 ASP CG OD1 doub N N 126 ASP CG OD2 sing N N 127 ASP OD2 HD2 sing N N 128 ASP OXT HXT sing N N 129 CYS N CA sing N N 130 CYS N H sing N N 131 CYS N H2 sing N N 132 CYS CA C sing N N 133 CYS CA CB sing N N 134 CYS CA HA sing N N 135 CYS C O doub N N 136 CYS C OXT sing N N 137 CYS CB SG sing N N 138 CYS CB HB2 sing N N 139 CYS CB HB3 sing N N 140 CYS SG HG sing N N 141 CYS OXT HXT sing N N 142 GLN N CA sing N N 143 GLN N H sing N N 144 GLN N H2 sing N N 145 GLN CA C sing N N 146 GLN CA CB sing N N 147 GLN CA HA sing N N 148 GLN C O doub N N 149 GLN C OXT sing N N 150 GLN CB CG sing N N 151 GLN CB HB2 sing N N 152 GLN CB HB3 sing N N 153 GLN CG CD sing N N 154 GLN CG HG2 sing N N 155 GLN CG HG3 sing N N 156 GLN CD OE1 doub N N 157 GLN CD NE2 sing N N 158 GLN NE2 HE21 sing N N 159 GLN NE2 HE22 sing N N 160 GLN OXT HXT sing N N 161 GLU N CA sing N N 162 GLU N H sing N N 163 GLU N H2 sing N N 164 GLU CA C sing N N 165 GLU CA CB sing N N 166 GLU CA HA sing N N 167 GLU C O doub N N 168 GLU C OXT sing N N 169 GLU CB CG sing N N 170 GLU CB HB2 sing N N 171 GLU CB HB3 sing N N 172 GLU CG CD sing N N 173 GLU CG HG2 sing N N 174 GLU CG HG3 sing N N 175 GLU CD OE1 doub N N 176 GLU CD OE2 sing N N 177 GLU OE2 HE2 sing N N 178 GLU OXT HXT sing N N 179 GLY N CA sing N N 180 GLY N H sing N N 181 GLY N H2 sing N N 182 GLY CA C sing N N 183 GLY CA HA2 sing N N 184 GLY CA HA3 sing N N 185 GLY C O doub N N 186 GLY C OXT sing N N 187 GLY OXT HXT sing N N 188 HIS N CA sing N N 189 HIS N H sing N N 190 HIS N H2 sing N N 191 HIS CA C sing N N 192 HIS CA CB sing N N 193 HIS CA HA sing N N 194 HIS C O doub N N 195 HIS C OXT sing N N 196 HIS CB CG sing N N 197 HIS CB HB2 sing N N 198 HIS CB HB3 sing N N 199 HIS CG ND1 sing Y N 200 HIS CG CD2 doub Y N 201 HIS ND1 CE1 doub Y N 202 HIS ND1 HD1 sing N N 203 HIS CD2 NE2 sing Y N 204 HIS CD2 HD2 sing N N 205 HIS CE1 NE2 sing Y N 206 HIS CE1 HE1 sing N N 207 HIS NE2 HE2 sing N N 208 HIS OXT HXT sing N N 209 HOH O H1 sing N N 210 HOH O H2 sing N N 211 ILE N CA sing N N 212 ILE N H sing N N 213 ILE N H2 sing N N 214 ILE CA C sing N N 215 ILE CA CB sing N N 216 ILE CA HA sing N N 217 ILE C O doub N N 218 ILE C OXT sing N N 219 ILE CB CG1 sing N N 220 ILE CB CG2 sing N N 221 ILE CB HB sing N N 222 ILE CG1 CD1 sing N N 223 ILE CG1 HG12 sing N N 224 ILE CG1 HG13 sing N N 225 ILE CG2 HG21 sing N N 226 ILE CG2 HG22 sing N N 227 ILE CG2 HG23 sing N N 228 ILE CD1 HD11 sing N N 229 ILE CD1 HD12 sing N N 230 ILE CD1 HD13 sing N N 231 ILE OXT HXT sing N N 232 LEU N CA sing N N 233 LEU N H sing N N 234 LEU N H2 sing N N 235 LEU CA C sing N N 236 LEU CA CB sing N N 237 LEU CA HA sing N N 238 LEU C O doub N N 239 LEU C OXT sing N N 240 LEU CB CG sing N N 241 LEU CB HB2 sing N N 242 LEU CB HB3 sing N N 243 LEU CG CD1 sing N N 244 LEU CG CD2 sing N N 245 LEU CG HG sing N N 246 LEU CD1 HD11 sing N N 247 LEU CD1 HD12 sing N N 248 LEU CD1 HD13 sing N N 249 LEU CD2 HD21 sing N N 250 LEU CD2 HD22 sing N N 251 LEU CD2 HD23 sing N N 252 LEU OXT HXT sing N N 253 LYS N CA sing N N 254 LYS N H sing N N 255 LYS N H2 sing N N 256 LYS CA C sing N N 257 LYS CA CB sing N N 258 LYS CA HA sing N N 259 LYS C O doub N N 260 LYS C OXT sing N N 261 LYS CB CG sing N N 262 LYS CB HB2 sing N N 263 LYS CB HB3 sing N N 264 LYS CG CD sing N N 265 LYS CG HG2 sing N N 266 LYS CG HG3 sing N N 267 LYS CD CE sing N N 268 LYS CD HD2 sing N N 269 LYS CD HD3 sing N N 270 LYS CE NZ sing N N 271 LYS CE HE2 sing N N 272 LYS CE HE3 sing N N 273 LYS NZ HZ1 sing N N 274 LYS NZ HZ2 sing N N 275 LYS NZ HZ3 sing N N 276 LYS OXT HXT sing N N 277 MET N CA sing N N 278 MET N H sing N N 279 MET N H2 sing N N 280 MET CA C sing N N 281 MET CA CB sing N N 282 MET CA HA sing N N 283 MET C O doub N N 284 MET C OXT sing N N 285 MET CB CG sing N N 286 MET CB HB2 sing N N 287 MET CB HB3 sing N N 288 MET CG SD sing N N 289 MET CG HG2 sing N N 290 MET CG HG3 sing N N 291 MET SD CE sing N N 292 MET CE HE1 sing N N 293 MET CE HE2 sing N N 294 MET CE HE3 sing N N 295 MET OXT HXT sing N N 296 PHE N CA sing N N 297 PHE N H sing N N 298 PHE N H2 sing N N 299 PHE CA C sing N N 300 PHE CA CB sing N N 301 PHE CA HA sing N N 302 PHE C O doub N N 303 PHE C OXT sing N N 304 PHE CB CG sing N N 305 PHE CB HB2 sing N N 306 PHE CB HB3 sing N N 307 PHE CG CD1 doub Y N 308 PHE CG CD2 sing Y N 309 PHE CD1 CE1 sing Y N 310 PHE CD1 HD1 sing N N 311 PHE CD2 CE2 doub Y N 312 PHE CD2 HD2 sing N N 313 PHE CE1 CZ doub Y N 314 PHE CE1 HE1 sing N N 315 PHE CE2 CZ sing Y N 316 PHE CE2 HE2 sing N N 317 PHE CZ HZ sing N N 318 PHE OXT HXT sing N N 319 PRO N CA sing N N 320 PRO N CD sing N N 321 PRO N H sing N N 322 PRO CA C sing N N 323 PRO CA CB sing N N 324 PRO CA HA sing N N 325 PRO C O doub N N 326 PRO C OXT sing N N 327 PRO CB CG sing N N 328 PRO CB HB2 sing N N 329 PRO CB HB3 sing N N 330 PRO CG CD sing N N 331 PRO CG HG2 sing N N 332 PRO CG HG3 sing N N 333 PRO CD HD2 sing N N 334 PRO CD HD3 sing N N 335 PRO OXT HXT sing N N 336 SER N CA sing N N 337 SER N H sing N N 338 SER N H2 sing N N 339 SER CA C sing N N 340 SER CA CB sing N N 341 SER CA HA sing N N 342 SER C O doub N N 343 SER C OXT sing N N 344 SER CB OG sing N N 345 SER CB HB2 sing N N 346 SER CB HB3 sing N N 347 SER OG HG sing N N 348 SER OXT HXT sing N N 349 SO4 S O1 doub N N 350 SO4 S O2 doub N N 351 SO4 S O3 sing N N 352 SO4 S O4 sing N N 353 THR N CA sing N N 354 THR N H sing N N 355 THR N H2 sing N N 356 THR CA C sing N N 357 THR CA CB sing N N 358 THR CA HA sing N N 359 THR C O doub N N 360 THR C OXT sing N N 361 THR CB OG1 sing N N 362 THR CB CG2 sing N N 363 THR CB HB sing N N 364 THR OG1 HG1 sing N N 365 THR CG2 HG21 sing N N 366 THR CG2 HG22 sing N N 367 THR CG2 HG23 sing N N 368 THR OXT HXT sing N N 369 TRP N CA sing N N 370 TRP N H sing N N 371 TRP N H2 sing N N 372 TRP CA C sing N N 373 TRP CA CB sing N N 374 TRP CA HA sing N N 375 TRP C O doub N N 376 TRP C OXT sing N N 377 TRP CB CG sing N N 378 TRP CB HB2 sing N N 379 TRP CB HB3 sing N N 380 TRP CG CD1 doub Y N 381 TRP CG CD2 sing Y N 382 TRP CD1 NE1 sing Y N 383 TRP CD1 HD1 sing N N 384 TRP CD2 CE2 doub Y N 385 TRP CD2 CE3 sing Y N 386 TRP NE1 CE2 sing Y N 387 TRP NE1 HE1 sing N N 388 TRP CE2 CZ2 sing Y N 389 TRP CE3 CZ3 doub Y N 390 TRP CE3 HE3 sing N N 391 TRP CZ2 CH2 doub Y N 392 TRP CZ2 HZ2 sing N N 393 TRP CZ3 CH2 sing Y N 394 TRP CZ3 HZ3 sing N N 395 TRP CH2 HH2 sing N N 396 TRP OXT HXT sing N N 397 TYR N CA sing N N 398 TYR N H sing N N 399 TYR N H2 sing N N 400 TYR CA C sing N N 401 TYR CA CB sing N N 402 TYR CA HA sing N N 403 TYR C O doub N N 404 TYR C OXT sing N N 405 TYR CB CG sing N N 406 TYR CB HB2 sing N N 407 TYR CB HB3 sing N N 408 TYR CG CD1 doub Y N 409 TYR CG CD2 sing Y N 410 TYR CD1 CE1 sing Y N 411 TYR CD1 HD1 sing N N 412 TYR CD2 CE2 doub Y N 413 TYR CD2 HD2 sing N N 414 TYR CE1 CZ doub Y N 415 TYR CE1 HE1 sing N N 416 TYR CE2 CZ sing Y N 417 TYR CE2 HE2 sing N N 418 TYR CZ OH sing N N 419 TYR OH HH sing N N 420 TYR OXT HXT sing N N 421 VAL N CA sing N N 422 VAL N H sing N N 423 VAL N H2 sing N N 424 VAL CA C sing N N 425 VAL CA CB sing N N 426 VAL CA HA sing N N 427 VAL C O doub N N 428 VAL C OXT sing N N 429 VAL CB CG1 sing N N 430 VAL CB CG2 sing N N 431 VAL CB HB sing N N 432 VAL CG1 HG11 sing N N 433 VAL CG1 HG12 sing N N 434 VAL CG1 HG13 sing N N 435 VAL CG2 HG21 sing N N 436 VAL CG2 HG22 sing N N 437 VAL CG2 HG23 sing N N 438 VAL OXT HXT sing N N 439 # _atom_sites.entry_id 1PPH _atom_sites.fract_transf_matrix[1][1] 0.015746 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014453 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015672 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O S # loop_