data_1PPL # _entry.id 1PPL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1PPL WWPDB D_1000175790 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1PPM . unspecified PDB 1PPK . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1PPL _pdbx_database_status.recvd_initial_deposition_date 1992-06-01 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Fraser, M.E.' 1 'James, M.N.G.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Crystallographic analysis of transition-state mimics bound to penicillopepsin: phosphorus-containing peptide analogues.' Biochemistry 31 5201 5214 1992 BICHAW US 0006-2960 0033 ? 1606144 10.1021/bi00137a016 1 'Aspartic Proteinases and Their Catalytic Pathway' 'Biological Macromolecules and Assemblies' 3 413 ? 1987 ? US 0-471-85142-6 0879 'John Wiley and Sons, New York' ? ? 2 'Stereochemical Analysis of Peptide Bond Hydrolysis Catalyzed by the Aspartic Proteinase Penicillopepsin' Biochemistry 24 3701 ? 1985 BICHAW US 0006-2960 0033 ? ? ? 3 'Structure and Refinement of Penicillopepsin at 1.8 Angstroms Resolution' J.Mol.Biol. 163 299 ? 1983 JMOBAK UK 0022-2836 0070 ? ? ? 4 'Conformational Flexibility in the Active Sites of Aspartyl Proteinases Revealed by a Pepstatin Fragment Binding to Penicillopepsin' Proc.Natl.Acad.Sci.USA 79 6137 ? 1982 PNASA6 US 0027-8424 0040 ? ? ? 5 'The Tertiary Structure of Penicillopepsin. Towards a Catalytic Mechanism for Acid Proteases' 'STRUCTURAL STUDIES ON MOLECULES OF BIOLOGICA INTERESTL' ? 350 ? 1981 ? ? 0-19-855362-5 0996 'Oxford University Press,New York' ? ? 6 'An X-Ray Crystallographic Approach to Enzyme Structure and Function' Can.J.Biochem. 58 251 ? 1980 CJBIAE CA 0008-4018 0415 ? ? ? 7 'Structural Evidence for Gene Duplication in the Evolution of the Acid Proteases' Nature 271 618 ? 1978 NATUAS UK 0028-0836 0006 ? ? ? 8 'Mechanism of Acid Protease Catalysis Based on the Crystal Structure of Penicillopepsin' Nature 267 808 ? 1977 NATUAS UK 0028-0836 0006 ? ? ? 9 'Penicillopepsin from Penicillium Janthinellum Crystal Structure at 2.8 Angstroms and Sequence Homology with Porcine Pepsin' Nature 266 140 ? 1977 NATUAS UK 0028-0836 0006 ? ? ? 10 'Penicillopepsin. 2.8 Angstroms Structure, Active Site Conformation and Mechanistic Implications' Adv.Exp.Med.Biol. 95 61 ? 1977 AEMBAP US 0065-2598 0412 ? ? ? 11 'The Crystal Structure of Penicillopepsin at 6 Angstroms Resolution' Biochem.Biophys.Res.Commun. 72 363 ? 1976 BBRCA9 US 0006-291X 0146 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Fraser, M.E.' 1 ? primary 'Strynadka, N.C.' 2 ? primary 'Bartlett, P.A.' 3 ? primary 'Hanson, J.E.' 4 ? primary 'James, M.N.' 5 ? 1 'James, M.N.G.' 6 ? 1 'Sielecki, A.R.' 7 ? 2 'James, M.N.G.' 8 ? 2 'Sielecki, A.R.' 9 ? 3 'James, M.N.G.' 10 ? 3 'Sielecki, A.R.' 11 ? 4 'James, M.N.G.' 12 ? 4 'Sielecki, A.' 13 ? 4 'Salituro, F.' 14 ? 4 'Rich, D.H.' 15 ? 4 'Hofmann, T.' 16 ? 5 'James, M.N.G.' 17 ? 5 'Hsu, I-N.' 18 ? 5 'Hofmann, T.' 19 ? 5 'Sielecki, A.R.' 20 ? 6 'James, M.N.G.' 21 ? 7 'Tang, J.' 22 ? 7 'James, M.N.G.' 23 ? 7 'Hsu, I.N.' 24 ? 7 'Jenkins, J.A.' 25 ? 7 'Blundell, T.L.' 26 ? 8 'James, M.N.G.' 27 ? 8 'Hsu, I.-N.' 28 ? 8 'Delbaere, L.T.J.' 29 ? 9 'Hsu, I.-N.' 30 ? 9 'Delbaere, L.T.J.' 31 ? 9 'James, M.N.G.' 32 ? 9 'Hofmann, T.' 33 ? 10 'Hsu, I-N.' 34 ? 10 'Delbaere, L.T.J.' 35 ? 10 'James, M.N.G.' 36 ? 10 'Hofmann, T.' 37 ? 11 'Hsu, I-N.' 38 ? 11 'Hofmann, T.' 39 ? 11 'Nyburg, S.C.' 40 ? 11 'James, M.N.G.' 41 ? # loop_ _citation_editor.citation_id _citation_editor.name _citation_editor.ordinal 1 'Jurnak, F.A.' 1 1 'McPherson, A.' 2 5 'Dodson, G.' 3 5 'Glusker, J.P.' 4 5 'Sayre, D.' 5 # _cell.entry_id 1PPL _cell.length_a 97.500 _cell.length_b 46.460 _cell.length_c 65.930 _cell.angle_alpha 90.00 _cell.angle_beta 115.20 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1PPL _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man PENICILLOPEPSIN 33468.809 1 3.4.23.20 ? ? ? 2 non-polymer syn 'N-(3-methylbutanoyl)-L-valyl-N-{(1S)-1-[(R)-[(1R)-1-benzyl-2-methoxy-2-oxoethoxy](hydroxy)phosphoryl]-3-methylbutyl}-L- valinamide' 611.707 1 ? ? ? ? 3 non-polymer man alpha-D-mannopyranose 180.156 1 ? ? ? ? 4 non-polymer man alpha-D-xylopyranose 150.130 1 ? ? ? ? 5 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 6 water nat water 18.015 276 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;AASGVATNTPTANDEEYITPVTIGGTTLNLNFDTGSADLWVFSTELPASQQSGHSVYNPSATGKELSGYTWSISYGDGSS ASGNVFTDSVTVGGVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSSLAQPLFAVALKHQ QPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGSQSGDGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQQDS NAGGYVFDCSTNLPDFSVSISGYTATVPGSLINYGPSGDGSTCLGGIQSNSGIGFSIFGDIFLKSQYVVFDSDGPQLGFA PQA ; _entity_poly.pdbx_seq_one_letter_code_can ;AASGVATNTPTANDEEYITPVTIGGTTLNLNFDTGSADLWVFSTELPASQQSGHSVYNPSATGKELSGYTWSISYGDGSS ASGNVFTDSVTVGGVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSSLAQPLFAVALKHQ QPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGSQSGDGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQQDS NAGGYVFDCSTNLPDFSVSISGYTATVPGSLINYGPSGDGSTCLGGIQSNSGIGFSIFGDIFLKSQYVVFDSDGPQLGFA PQA ; _entity_poly.pdbx_strand_id E _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ALA n 1 3 SER n 1 4 GLY n 1 5 VAL n 1 6 ALA n 1 7 THR n 1 8 ASN n 1 9 THR n 1 10 PRO n 1 11 THR n 1 12 ALA n 1 13 ASN n 1 14 ASP n 1 15 GLU n 1 16 GLU n 1 17 TYR n 1 18 ILE n 1 19 THR n 1 20 PRO n 1 21 VAL n 1 22 THR n 1 23 ILE n 1 24 GLY n 1 25 GLY n 1 26 THR n 1 27 THR n 1 28 LEU n 1 29 ASN n 1 30 LEU n 1 31 ASN n 1 32 PHE n 1 33 ASP n 1 34 THR n 1 35 GLY n 1 36 SER n 1 37 ALA n 1 38 ASP n 1 39 LEU n 1 40 TRP n 1 41 VAL n 1 42 PHE n 1 43 SER n 1 44 THR n 1 45 GLU n 1 46 LEU n 1 47 PRO n 1 48 ALA n 1 49 SER n 1 50 GLN n 1 51 GLN n 1 52 SER n 1 53 GLY n 1 54 HIS n 1 55 SER n 1 56 VAL n 1 57 TYR n 1 58 ASN n 1 59 PRO n 1 60 SER n 1 61 ALA n 1 62 THR n 1 63 GLY n 1 64 LYS n 1 65 GLU n 1 66 LEU n 1 67 SER n 1 68 GLY n 1 69 TYR n 1 70 THR n 1 71 TRP n 1 72 SER n 1 73 ILE n 1 74 SER n 1 75 TYR n 1 76 GLY n 1 77 ASP n 1 78 GLY n 1 79 SER n 1 80 SER n 1 81 ALA n 1 82 SER n 1 83 GLY n 1 84 ASN n 1 85 VAL n 1 86 PHE n 1 87 THR n 1 88 ASP n 1 89 SER n 1 90 VAL n 1 91 THR n 1 92 VAL n 1 93 GLY n 1 94 GLY n 1 95 VAL n 1 96 THR n 1 97 ALA n 1 98 HIS n 1 99 GLY n 1 100 GLN n 1 101 ALA n 1 102 VAL n 1 103 GLN n 1 104 ALA n 1 105 ALA n 1 106 GLN n 1 107 GLN n 1 108 ILE n 1 109 SER n 1 110 ALA n 1 111 GLN n 1 112 PHE n 1 113 GLN n 1 114 GLN n 1 115 ASP n 1 116 THR n 1 117 ASN n 1 118 ASN n 1 119 ASP n 1 120 GLY n 1 121 LEU n 1 122 LEU n 1 123 GLY n 1 124 LEU n 1 125 ALA n 1 126 PHE n 1 127 SER n 1 128 SER n 1 129 ILE n 1 130 ASN n 1 131 THR n 1 132 VAL n 1 133 GLN n 1 134 PRO n 1 135 GLN n 1 136 SER n 1 137 GLN n 1 138 THR n 1 139 THR n 1 140 PHE n 1 141 PHE n 1 142 ASP n 1 143 THR n 1 144 VAL n 1 145 LYS n 1 146 SER n 1 147 SER n 1 148 LEU n 1 149 ALA n 1 150 GLN n 1 151 PRO n 1 152 LEU n 1 153 PHE n 1 154 ALA n 1 155 VAL n 1 156 ALA n 1 157 LEU n 1 158 LYS n 1 159 HIS n 1 160 GLN n 1 161 GLN n 1 162 PRO n 1 163 GLY n 1 164 VAL n 1 165 TYR n 1 166 ASP n 1 167 PHE n 1 168 GLY n 1 169 PHE n 1 170 ILE n 1 171 ASP n 1 172 SER n 1 173 SER n 1 174 LYS n 1 175 TYR n 1 176 THR n 1 177 GLY n 1 178 SER n 1 179 LEU n 1 180 THR n 1 181 TYR n 1 182 THR n 1 183 GLY n 1 184 VAL n 1 185 ASP n 1 186 ASN n 1 187 SER n 1 188 GLN n 1 189 GLY n 1 190 PHE n 1 191 TRP n 1 192 SER n 1 193 PHE n 1 194 ASN n 1 195 VAL n 1 196 ASP n 1 197 SER n 1 198 TYR n 1 199 THR n 1 200 ALA n 1 201 GLY n 1 202 SER n 1 203 GLN n 1 204 SER n 1 205 GLY n 1 206 ASP n 1 207 GLY n 1 208 PHE n 1 209 SER n 1 210 GLY n 1 211 ILE n 1 212 ALA n 1 213 ASP n 1 214 THR n 1 215 GLY n 1 216 THR n 1 217 THR n 1 218 LEU n 1 219 LEU n 1 220 LEU n 1 221 LEU n 1 222 ASP n 1 223 ASP n 1 224 SER n 1 225 VAL n 1 226 VAL n 1 227 SER n 1 228 GLN n 1 229 TYR n 1 230 TYR n 1 231 SER n 1 232 GLN n 1 233 VAL n 1 234 SER n 1 235 GLY n 1 236 ALA n 1 237 GLN n 1 238 GLN n 1 239 ASP n 1 240 SER n 1 241 ASN n 1 242 ALA n 1 243 GLY n 1 244 GLY n 1 245 TYR n 1 246 VAL n 1 247 PHE n 1 248 ASP n 1 249 CYS n 1 250 SER n 1 251 THR n 1 252 ASN n 1 253 LEU n 1 254 PRO n 1 255 ASP n 1 256 PHE n 1 257 SER n 1 258 VAL n 1 259 SER n 1 260 ILE n 1 261 SER n 1 262 GLY n 1 263 TYR n 1 264 THR n 1 265 ALA n 1 266 THR n 1 267 VAL n 1 268 PRO n 1 269 GLY n 1 270 SER n 1 271 LEU n 1 272 ILE n 1 273 ASN n 1 274 TYR n 1 275 GLY n 1 276 PRO n 1 277 SER n 1 278 GLY n 1 279 ASP n 1 280 GLY n 1 281 SER n 1 282 THR n 1 283 CYS n 1 284 LEU n 1 285 GLY n 1 286 GLY n 1 287 ILE n 1 288 GLN n 1 289 SER n 1 290 ASN n 1 291 SER n 1 292 GLY n 1 293 ILE n 1 294 GLY n 1 295 PHE n 1 296 SER n 1 297 ILE n 1 298 PHE n 1 299 GLY n 1 300 ASP n 1 301 ILE n 1 302 PHE n 1 303 LEU n 1 304 LYS n 1 305 SER n 1 306 GLN n 1 307 TYR n 1 308 VAL n 1 309 VAL n 1 310 PHE n 1 311 ASP n 1 312 SER n 1 313 ASP n 1 314 GLY n 1 315 PRO n 1 316 GLN n 1 317 LEU n 1 318 GLY n 1 319 PHE n 1 320 ALA n 1 321 PRO n 1 322 GLN n 1 323 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Penicillium janthinellum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 5079 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PENP_PENJA _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P00798 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;AASGVATNTPTANDEEYITPVTIGGTTLNLNFDTGSADLWVFSTELPASQQSGHSVYNPSATGKELSGYTWSISYGDGSS ASGNVFTDSVTVGGVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSSLAQPLFAVALKHQ QPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGSQSGDGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQQDS NAGGYVFDCSTNLPDFSVSISGYTATVPGSLINYGPSGDGSTCLGGIQSNSGIGFSIFGDIFLKSQYVVFDSDGPQLGFA PQA ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1PPL _struct_ref_seq.pdbx_strand_id E _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 323 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00798 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 323 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 323 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 1Z7 peptide-like . 'N-(3-methylbutanoyl)-L-valyl-N-{(1S)-1-[(R)-[(1R)-1-benzyl-2-methoxy-2-oxoethoxy](hydroxy)phosphoryl]-3-methylbutyl}-L- valinamide' 'IVA-VAL-VAL-LP(0)FOMe' 'C30 H50 N3 O8 P' 611.707 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose ? 'C6 H12 O6' 180.156 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 XYS 'D-saccharide, alpha linking' . alpha-D-xylopyranose ? 'C5 H10 O5' 150.130 # _exptl.entry_id 1PPL _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.98 _exptl_crystal.density_percent_sol 37.96 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.entry_id 1PPL _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high 1.7 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.148 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.148 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2366 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 67 _refine_hist.number_atoms_solvent 276 _refine_hist.number_atoms_total 2709 _refine_hist.d_res_high 1.7 _refine_hist.d_res_low . # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.024 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1PPL _struct.title 'CRYSTALLOGRAPHIC ANALYSIS OF TRANSITION-STATE MIMICS BOUND TO PENICILLOPEPSIN: PHOSPHORUS-CONTAINING PEPTIDE ANALOGUES' _struct.pdbx_descriptor PENICILLOPEPSIN _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1PPL _struct_keywords.pdbx_keywords 'HYDROLASE/hydrolase inhibitor' _struct_keywords.text 'ACID PROTEINASE, HYDROLASE-hydrolase inhibitor complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 12 ? GLU A 15 ? ALA E 12 GLU E 15 5 ? 4 HELX_P HELX_P2 2 PRO A 47 ? SER A 52 ? PRO E 47 SER E 52 1 ? 6 HELX_P HELX_P3 3 ASN A 58 ? GLY A 63 ? ASN E 58 GLY E 63 1 ? 6 HELX_P HELX_P4 4 SER A 109 ? ASP A 115 ? SER E 109 ASP E 115 1 ? 7 HELX_P HELX_P5 5 PHE A 126 ? ASN A 130 ? PHE E 126 ASN E 130 5 ? 5 HELX_P HELX_P6 6 THR A 139 ? LYS A 145 ? THR E 139 LYS E 145 1 ? 7 HELX_P HELX_P7 7 ASP A 171 ? LYS A 174 ? ASP E 171 LYS E 174 5 ? 4 HELX_P HELX_P8 8 ASP A 222 ? SER A 231 ? ASP E 222 SER E 231 1 ? 10 HELX_P HELX_P9 9 PRO A 268 ? ILE A 272 ? PRO E 268 ILE E 272 1 ? 5 HELX_P HELX_P10 10 GLY A 299 ? LYS A 304 ? GLY E 299 LYS E 304 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 249 SG ? ? ? 1_555 A CYS 283 SG ? ? E CYS 249 E CYS 283 1_555 ? ? ? ? ? ? ? 2.058 ? ? covale1 covale one ? A SER 3 OG ? ? ? 1_555 C MAN . C1 ? ? E SER 3 E MAN 329 1_555 ? ? ? ? ? ? ? 1.444 ? O-Glycosylation covale2 covale one ? A THR 7 OG1 ? ? ? 1_555 D XYS . C1 ? ? E THR 7 E XYS 330 1_555 ? ? ? ? ? ? ? 1.403 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLN 133 A . ? GLN 133 E PRO 134 A ? PRO 134 E 1 1.29 2 GLY 314 A . ? GLY 314 E PRO 315 A ? PRO 315 E 1 -6.94 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel A 5 6 ? anti-parallel A 6 7 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 263 ? VAL A 267 ? TYR E 263 VAL E 267 A 2 PHE A 256 ? ILE A 260 ? PHE E 256 ILE E 260 A 3 SER A 192 ? ALA A 200 ? SER E 192 ALA E 200 A 4 GLN A 203 ? ALA A 212 ? GLN E 203 ALA E 212 A 5 SER A 296 ? PHE A 298 ? SER E 296 PHE E 298 A 6 LEU A 219 ? LEU A 221 ? LEU E 219 LEU E 221 A 7 ILE A 287 ? SER A 289 ? ILE E 287 SER E 289 B 1 GLN A 237 ? ASP A 239 ? GLN E 237 ASP E 239 B 2 GLY A 244 ? ASP A 248 ? GLY E 244 ASP E 248 B 3 THR A 282 ? GLY A 285 ? THR E 282 GLY E 285 B 4 ASN A 273 ? PRO A 276 ? ASN E 273 PRO E 276 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 267 ? N VAL E 267 O PHE A 256 ? O PHE E 256 A 2 3 O SER A 259 ? O SER E 259 N ASP A 196 ? N ASP E 196 A 3 4 N ALA A 200 ? N ALA E 200 O GLN A 203 ? O GLN E 203 A 4 5 N ILE A 211 ? N ILE E 211 O SER A 296 ? O SER E 296 A 5 6 N ILE A 297 ? N ILE E 297 O LEU A 220 ? O LEU E 220 A 6 7 O LEU A 219 ? O LEU E 219 N GLN A 288 ? N GLN E 288 B 1 2 N ASP A 239 ? N ASP E 239 O GLY A 244 ? O GLY E 244 B 2 3 O PHE A 247 ? O PHE E 247 N CYS A 283 ? N CYS E 283 B 3 4 O LEU A 284 ? O LEU E 284 N TYR A 274 ? N TYR E 274 # _database_PDB_matrix.entry_id 1PPL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1PPL _atom_sites.fract_transf_matrix[1][1] 0.010256 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004826 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021524 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016763 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # _atom_sites_footnote.id 1 _atom_sites_footnote.text 'RESIDUES 134 AND 315 ARE CIS PROLINES.' # loop_ _atom_type.symbol C N O P S # loop_ _database_PDB_caveat.id _database_PDB_caveat.text 1 'XYS E 330 HAS WRONG CHIRALITY AT ATOM C1' 2 'XYS E 330 HAS WRONG CHIRALITY AT ATOM C2' 3 'XYS E 330 HAS WRONG CHIRALITY AT ATOM C3' 4 'XYS E 330 HAS WRONG CHIRALITY AT ATOM C4' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA E . n A 1 2 ALA 2 2 2 ALA ALA E . n A 1 3 SER 3 3 3 SER SER E . n A 1 4 GLY 4 4 4 GLY GLY E . n A 1 5 VAL 5 5 5 VAL VAL E . n A 1 6 ALA 6 6 6 ALA ALA E . n A 1 7 THR 7 7 7 THR THR E . n A 1 8 ASN 8 8 8 ASN ASN E . n A 1 9 THR 9 9 9 THR THR E . n A 1 10 PRO 10 10 10 PRO PRO E . n A 1 11 THR 11 11 11 THR THR E . n A 1 12 ALA 12 12 12 ALA ALA E . n A 1 13 ASN 13 13 13 ASN ASN E . n A 1 14 ASP 14 14 14 ASP ASP E . n A 1 15 GLU 15 15 15 GLU GLU E . n A 1 16 GLU 16 16 16 GLU GLU E . n A 1 17 TYR 17 17 17 TYR TYR E . n A 1 18 ILE 18 18 18 ILE ILE E . n A 1 19 THR 19 19 19 THR THR E . n A 1 20 PRO 20 20 20 PRO PRO E . n A 1 21 VAL 21 21 21 VAL VAL E . n A 1 22 THR 22 22 22 THR THR E . n A 1 23 ILE 23 23 23 ILE ILE E . n A 1 24 GLY 24 24 24 GLY GLY E . n A 1 25 GLY 25 25 25 GLY GLY E . n A 1 26 THR 26 26 26 THR THR E . n A 1 27 THR 27 27 27 THR THR E . n A 1 28 LEU 28 28 28 LEU LEU E . n A 1 29 ASN 29 29 29 ASN ASN E . n A 1 30 LEU 30 30 30 LEU LEU E . n A 1 31 ASN 31 31 31 ASN ASN E . n A 1 32 PHE 32 32 32 PHE PHE E . n A 1 33 ASP 33 33 33 ASP ASP E . n A 1 34 THR 34 34 34 THR THR E . n A 1 35 GLY 35 35 35 GLY GLY E . n A 1 36 SER 36 36 36 SER SER E . n A 1 37 ALA 37 37 37 ALA ALA E . n A 1 38 ASP 38 38 38 ASP ASP E . n A 1 39 LEU 39 39 39 LEU LEU E . n A 1 40 TRP 40 40 40 TRP TRP E . n A 1 41 VAL 41 41 41 VAL VAL E . n A 1 42 PHE 42 42 42 PHE PHE E . n A 1 43 SER 43 43 43 SER SER E . n A 1 44 THR 44 44 44 THR THR E . n A 1 45 GLU 45 45 45 GLU GLU E . n A 1 46 LEU 46 46 46 LEU LEU E . n A 1 47 PRO 47 47 47 PRO PRO E . n A 1 48 ALA 48 48 48 ALA ALA E . n A 1 49 SER 49 49 49 SER SER E . n A 1 50 GLN 50 50 50 GLN GLN E . n A 1 51 GLN 51 51 51 GLN GLN E . n A 1 52 SER 52 52 52 SER SER E . n A 1 53 GLY 53 53 53 GLY GLY E . n A 1 54 HIS 54 54 54 HIS HIS E . n A 1 55 SER 55 55 55 SER SER E . n A 1 56 VAL 56 56 56 VAL VAL E . n A 1 57 TYR 57 57 57 TYR TYR E . n A 1 58 ASN 58 58 58 ASN ASN E . n A 1 59 PRO 59 59 59 PRO PRO E . n A 1 60 SER 60 60 60 SER SER E . n A 1 61 ALA 61 61 61 ALA ALA E . n A 1 62 THR 62 62 62 THR THR E . n A 1 63 GLY 63 63 63 GLY GLY E . n A 1 64 LYS 64 64 64 LYS LYS E . n A 1 65 GLU 65 65 65 GLU GLU E . n A 1 66 LEU 66 66 66 LEU LEU E . n A 1 67 SER 67 67 67 SER SER E . n A 1 68 GLY 68 68 68 GLY GLY E . n A 1 69 TYR 69 69 69 TYR TYR E . n A 1 70 THR 70 70 70 THR THR E . n A 1 71 TRP 71 71 71 TRP TRP E . n A 1 72 SER 72 72 72 SER SER E . n A 1 73 ILE 73 73 73 ILE ILE E . n A 1 74 SER 74 74 74 SER SER E . n A 1 75 TYR 75 75 75 TYR TYR E . n A 1 76 GLY 76 76 76 GLY GLY E . n A 1 77 ASP 77 77 77 ASP ASP E . n A 1 78 GLY 78 78 78 GLY GLY E . n A 1 79 SER 79 79 79 SER SER E . n A 1 80 SER 80 80 80 SER SER E . n A 1 81 ALA 81 81 81 ALA ALA E . n A 1 82 SER 82 82 82 SER SER E . n A 1 83 GLY 83 83 83 GLY GLY E . n A 1 84 ASN 84 84 84 ASN ASN E . n A 1 85 VAL 85 85 85 VAL VAL E . n A 1 86 PHE 86 86 86 PHE PHE E . n A 1 87 THR 87 87 87 THR THR E . n A 1 88 ASP 88 88 88 ASP ASP E . n A 1 89 SER 89 89 89 SER SER E . n A 1 90 VAL 90 90 90 VAL VAL E . n A 1 91 THR 91 91 91 THR THR E . n A 1 92 VAL 92 92 92 VAL VAL E . n A 1 93 GLY 93 93 93 GLY GLY E . n A 1 94 GLY 94 94 94 GLY GLY E . n A 1 95 VAL 95 95 95 VAL VAL E . n A 1 96 THR 96 96 96 THR THR E . n A 1 97 ALA 97 97 97 ALA ALA E . n A 1 98 HIS 98 98 98 HIS HIS E . n A 1 99 GLY 99 99 99 GLY GLY E . n A 1 100 GLN 100 100 100 GLN GLN E . n A 1 101 ALA 101 101 101 ALA ALA E . n A 1 102 VAL 102 102 102 VAL VAL E . n A 1 103 GLN 103 103 103 GLN GLN E . n A 1 104 ALA 104 104 104 ALA ALA E . n A 1 105 ALA 105 105 105 ALA ALA E . n A 1 106 GLN 106 106 106 GLN GLN E . n A 1 107 GLN 107 107 107 GLN GLN E . n A 1 108 ILE 108 108 108 ILE ILE E . n A 1 109 SER 109 109 109 SER SER E . n A 1 110 ALA 110 110 110 ALA ALA E . n A 1 111 GLN 111 111 111 GLN GLN E . n A 1 112 PHE 112 112 112 PHE PHE E . n A 1 113 GLN 113 113 113 GLN GLN E . n A 1 114 GLN 114 114 114 GLN GLN E . n A 1 115 ASP 115 115 115 ASP ASP E . n A 1 116 THR 116 116 116 THR THR E . n A 1 117 ASN 117 117 117 ASN ASN E . n A 1 118 ASN 118 118 118 ASN ASN E . n A 1 119 ASP 119 119 119 ASP ASP E . n A 1 120 GLY 120 120 120 GLY GLY E . n A 1 121 LEU 121 121 121 LEU LEU E . n A 1 122 LEU 122 122 122 LEU LEU E . n A 1 123 GLY 123 123 123 GLY GLY E . n A 1 124 LEU 124 124 124 LEU LEU E . n A 1 125 ALA 125 125 125 ALA ALA E . n A 1 126 PHE 126 126 126 PHE PHE E . n A 1 127 SER 127 127 127 SER SER E . n A 1 128 SER 128 128 128 SER SER E . n A 1 129 ILE 129 129 129 ILE ILE E . n A 1 130 ASN 130 130 130 ASN ASN E . n A 1 131 THR 131 131 131 THR THR E . n A 1 132 VAL 132 132 132 VAL VAL E . n A 1 133 GLN 133 133 133 GLN GLN E . n A 1 134 PRO 134 134 134 PRO PRO E . n A 1 135 GLN 135 135 135 GLN GLN E . n A 1 136 SER 136 136 136 SER SER E . n A 1 137 GLN 137 137 137 GLN GLN E . n A 1 138 THR 138 138 138 THR THR E . n A 1 139 THR 139 139 139 THR THR E . n A 1 140 PHE 140 140 140 PHE PHE E . n A 1 141 PHE 141 141 141 PHE PHE E . n A 1 142 ASP 142 142 142 ASP ASP E . n A 1 143 THR 143 143 143 THR THR E . n A 1 144 VAL 144 144 144 VAL VAL E . n A 1 145 LYS 145 145 145 LYS LYS E . n A 1 146 SER 146 146 146 SER SER E . n A 1 147 SER 147 147 147 SER SER E . n A 1 148 LEU 148 148 148 LEU LEU E . n A 1 149 ALA 149 149 149 ALA ALA E . n A 1 150 GLN 150 150 150 GLN GLN E . n A 1 151 PRO 151 151 151 PRO PRO E . n A 1 152 LEU 152 152 152 LEU LEU E . n A 1 153 PHE 153 153 153 PHE PHE E . n A 1 154 ALA 154 154 154 ALA ALA E . n A 1 155 VAL 155 155 155 VAL VAL E . n A 1 156 ALA 156 156 156 ALA ALA E . n A 1 157 LEU 157 157 157 LEU LEU E . n A 1 158 LYS 158 158 158 LYS LYS E . n A 1 159 HIS 159 159 159 HIS HIS E . n A 1 160 GLN 160 160 160 GLN GLN E . n A 1 161 GLN 161 161 161 GLN GLN E . n A 1 162 PRO 162 162 162 PRO PRO E . n A 1 163 GLY 163 163 163 GLY GLY E . n A 1 164 VAL 164 164 164 VAL VAL E . n A 1 165 TYR 165 165 165 TYR TYR E . n A 1 166 ASP 166 166 166 ASP ASP E . n A 1 167 PHE 167 167 167 PHE PHE E . n A 1 168 GLY 168 168 168 GLY GLY E . n A 1 169 PHE 169 169 169 PHE PHE E . n A 1 170 ILE 170 170 170 ILE ILE E . n A 1 171 ASP 171 171 171 ASP ASP E . n A 1 172 SER 172 172 172 SER SER E . n A 1 173 SER 173 173 173 SER SER E . n A 1 174 LYS 174 174 174 LYS LYS E . n A 1 175 TYR 175 175 175 TYR TYR E . n A 1 176 THR 176 176 176 THR THR E . n A 1 177 GLY 177 177 177 GLY GLY E . n A 1 178 SER 178 178 178 SER SER E . n A 1 179 LEU 179 179 179 LEU LEU E . n A 1 180 THR 180 180 180 THR THR E . n A 1 181 TYR 181 181 181 TYR TYR E . n A 1 182 THR 182 182 182 THR THR E . n A 1 183 GLY 183 183 183 GLY GLY E . n A 1 184 VAL 184 184 184 VAL VAL E . n A 1 185 ASP 185 185 185 ASP ASP E . n A 1 186 ASN 186 186 186 ASN ASN E . n A 1 187 SER 187 187 187 SER SER E . n A 1 188 GLN 188 188 188 GLN GLN E . n A 1 189 GLY 189 189 189 GLY GLY E . n A 1 190 PHE 190 190 190 PHE PHE E . n A 1 191 TRP 191 191 191 TRP TRP E . n A 1 192 SER 192 192 192 SER SER E . n A 1 193 PHE 193 193 193 PHE PHE E . n A 1 194 ASN 194 194 194 ASN ASN E . n A 1 195 VAL 195 195 195 VAL VAL E . n A 1 196 ASP 196 196 196 ASP ASP E . n A 1 197 SER 197 197 197 SER SER E . n A 1 198 TYR 198 198 198 TYR TYR E . n A 1 199 THR 199 199 199 THR THR E . n A 1 200 ALA 200 200 200 ALA ALA E . n A 1 201 GLY 201 201 201 GLY GLY E . n A 1 202 SER 202 202 202 SER SER E . n A 1 203 GLN 203 203 203 GLN GLN E . n A 1 204 SER 204 204 204 SER SER E . n A 1 205 GLY 205 205 205 GLY GLY E . n A 1 206 ASP 206 206 206 ASP ASP E . n A 1 207 GLY 207 207 207 GLY GLY E . n A 1 208 PHE 208 208 208 PHE PHE E . n A 1 209 SER 209 209 209 SER SER E . n A 1 210 GLY 210 210 210 GLY GLY E . n A 1 211 ILE 211 211 211 ILE ILE E . n A 1 212 ALA 212 212 212 ALA ALA E . n A 1 213 ASP 213 213 213 ASP ASP E . n A 1 214 THR 214 214 214 THR THR E . n A 1 215 GLY 215 215 215 GLY GLY E . n A 1 216 THR 216 216 216 THR THR E . n A 1 217 THR 217 217 217 THR THR E . n A 1 218 LEU 218 218 218 LEU LEU E . n A 1 219 LEU 219 219 219 LEU LEU E . n A 1 220 LEU 220 220 220 LEU LEU E . n A 1 221 LEU 221 221 221 LEU LEU E . n A 1 222 ASP 222 222 222 ASP ASP E . n A 1 223 ASP 223 223 223 ASP ASP E . n A 1 224 SER 224 224 224 SER SER E . n A 1 225 VAL 225 225 225 VAL VAL E . n A 1 226 VAL 226 226 226 VAL VAL E . n A 1 227 SER 227 227 227 SER SER E . n A 1 228 GLN 228 228 228 GLN GLN E . n A 1 229 TYR 229 229 229 TYR TYR E . n A 1 230 TYR 230 230 230 TYR TYR E . n A 1 231 SER 231 231 231 SER SER E . n A 1 232 GLN 232 232 232 GLN GLN E . n A 1 233 VAL 233 233 233 VAL VAL E . n A 1 234 SER 234 234 234 SER SER E . n A 1 235 GLY 235 235 235 GLY GLY E . n A 1 236 ALA 236 236 236 ALA ALA E . n A 1 237 GLN 237 237 237 GLN GLN E . n A 1 238 GLN 238 238 238 GLN GLN E . n A 1 239 ASP 239 239 239 ASP ASP E . n A 1 240 SER 240 240 240 SER SER E . n A 1 241 ASN 241 241 241 ASN ASN E . n A 1 242 ALA 242 242 242 ALA ALA E . n A 1 243 GLY 243 243 243 GLY GLY E . n A 1 244 GLY 244 244 244 GLY GLY E . n A 1 245 TYR 245 245 245 TYR TYR E . n A 1 246 VAL 246 246 246 VAL VAL E . n A 1 247 PHE 247 247 247 PHE PHE E . n A 1 248 ASP 248 248 248 ASP ASP E . n A 1 249 CYS 249 249 249 CYS CYS E . n A 1 250 SER 250 250 250 SER SER E . n A 1 251 THR 251 251 251 THR THR E . n A 1 252 ASN 252 252 252 ASN ASN E . n A 1 253 LEU 253 253 253 LEU LEU E . n A 1 254 PRO 254 254 254 PRO PRO E . n A 1 255 ASP 255 255 255 ASP ASP E . n A 1 256 PHE 256 256 256 PHE PHE E . n A 1 257 SER 257 257 257 SER SER E . n A 1 258 VAL 258 258 258 VAL VAL E . n A 1 259 SER 259 259 259 SER SER E . n A 1 260 ILE 260 260 260 ILE ILE E . n A 1 261 SER 261 261 261 SER SER E . n A 1 262 GLY 262 262 262 GLY GLY E . n A 1 263 TYR 263 263 263 TYR TYR E . n A 1 264 THR 264 264 264 THR THR E . n A 1 265 ALA 265 265 265 ALA ALA E . n A 1 266 THR 266 266 266 THR THR E . n A 1 267 VAL 267 267 267 VAL VAL E . n A 1 268 PRO 268 268 268 PRO PRO E . n A 1 269 GLY 269 269 269 GLY GLY E . n A 1 270 SER 270 270 270 SER SER E . n A 1 271 LEU 271 271 271 LEU LEU E . n A 1 272 ILE 272 272 272 ILE ILE E . n A 1 273 ASN 273 273 273 ASN ASN E . n A 1 274 TYR 274 274 274 TYR TYR E . n A 1 275 GLY 275 275 275 GLY GLY E . n A 1 276 PRO 276 276 276 PRO PRO E . n A 1 277 SER 277 277 277 SER SER E . n A 1 278 GLY 278 278 278 GLY GLY E . n A 1 279 ASP 279 279 279 ASP ASP E . n A 1 280 GLY 280 280 280 GLY GLY E . n A 1 281 SER 281 281 281 SER SER E . n A 1 282 THR 282 282 282 THR THR E . n A 1 283 CYS 283 283 283 CYS CYS E . n A 1 284 LEU 284 284 284 LEU LEU E . n A 1 285 GLY 285 285 285 GLY GLY E . n A 1 286 GLY 286 286 286 GLY GLY E . n A 1 287 ILE 287 287 287 ILE ILE E . n A 1 288 GLN 288 288 288 GLN GLN E . n A 1 289 SER 289 289 289 SER SER E . n A 1 290 ASN 290 290 290 ASN ASN E . n A 1 291 SER 291 291 291 SER SER E . n A 1 292 GLY 292 292 292 GLY GLY E . n A 1 293 ILE 293 293 293 ILE ILE E . n A 1 294 GLY 294 294 294 GLY GLY E . n A 1 295 PHE 295 295 295 PHE PHE E . n A 1 296 SER 296 296 296 SER SER E . n A 1 297 ILE 297 297 297 ILE ILE E . n A 1 298 PHE 298 298 298 PHE PHE E . n A 1 299 GLY 299 299 299 GLY GLY E . n A 1 300 ASP 300 300 300 ASP ASP E . n A 1 301 ILE 301 301 301 ILE ILE E . n A 1 302 PHE 302 302 302 PHE PHE E . n A 1 303 LEU 303 303 303 LEU LEU E . n A 1 304 LYS 304 304 304 LYS LYS E . n A 1 305 SER 305 305 305 SER SER E . n A 1 306 GLN 306 306 306 GLN GLN E . n A 1 307 TYR 307 307 307 TYR TYR E . n A 1 308 VAL 308 308 308 VAL VAL E . n A 1 309 VAL 309 309 309 VAL VAL E . n A 1 310 PHE 310 310 310 PHE PHE E . n A 1 311 ASP 311 311 311 ASP ASP E . n A 1 312 SER 312 312 312 SER SER E . n A 1 313 ASP 313 313 313 ASP ASP E . n A 1 314 GLY 314 314 314 GLY GLY E . n A 1 315 PRO 315 315 315 PRO PRO E . n A 1 316 GLN 316 316 316 GLN GLN E . n A 1 317 LEU 317 317 317 LEU LEU E . n A 1 318 GLY 318 318 318 GLY GLY E . n A 1 319 PHE 319 319 319 PHE PHE E . n A 1 320 ALA 320 320 320 ALA ALA E . n A 1 321 PRO 321 321 321 PRO PRO E . n A 1 322 GLN 322 322 322 GLN GLN E . n A 1 323 ALA 323 323 323 ALA ALA E . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 1Z7 1 324 324 1Z7 IVA E . C 3 MAN 1 329 329 MAN MAN E . D 4 XYS 1 330 330 XYS XYS E . E 5 SO4 1 331 36 SO4 SO4 E . F 6 HOH 1 332 1 HOH HOH E . F 6 HOH 2 333 2 HOH HOH E . F 6 HOH 3 334 3 HOH HOH E . F 6 HOH 4 335 4 HOH HOH E . F 6 HOH 5 336 5 HOH HOH E . F 6 HOH 6 337 6 HOH HOH E . F 6 HOH 7 338 7 HOH HOH E . F 6 HOH 8 339 8 HOH HOH E . F 6 HOH 9 340 9 HOH HOH E . F 6 HOH 10 341 10 HOH HOH E . F 6 HOH 11 342 11 HOH HOH E . F 6 HOH 12 343 12 HOH HOH E . F 6 HOH 13 344 13 HOH HOH E . F 6 HOH 14 345 14 HOH HOH E . F 6 HOH 15 346 15 HOH HOH E . F 6 HOH 16 347 16 HOH HOH E . F 6 HOH 17 348 17 HOH HOH E . F 6 HOH 18 349 18 HOH HOH E . F 6 HOH 19 350 19 HOH HOH E . F 6 HOH 20 351 20 HOH HOH E . F 6 HOH 21 352 21 HOH HOH E . F 6 HOH 22 353 22 HOH HOH E . F 6 HOH 23 354 23 HOH HOH E . F 6 HOH 24 355 24 HOH HOH E . F 6 HOH 25 356 25 HOH HOH E . F 6 HOH 26 357 26 HOH HOH E . F 6 HOH 27 358 27 HOH HOH E . F 6 HOH 28 359 28 HOH HOH E . F 6 HOH 29 360 29 HOH HOH E . F 6 HOH 30 361 30 HOH HOH E . F 6 HOH 31 362 31 HOH HOH E . F 6 HOH 32 363 32 HOH HOH E . F 6 HOH 33 364 33 HOH HOH E . F 6 HOH 34 365 34 HOH HOH E . F 6 HOH 35 366 35 HOH HOH E . F 6 HOH 36 367 37 HOH HOH E . F 6 HOH 37 368 38 HOH HOH E . F 6 HOH 38 369 40 HOH HOH E . F 6 HOH 39 370 41 HOH HOH E . F 6 HOH 40 371 42 HOH HOH E . F 6 HOH 41 372 44 HOH HOH E . F 6 HOH 42 373 45 HOH HOH E . F 6 HOH 43 374 46 HOH HOH E . F 6 HOH 44 375 47 HOH HOH E . F 6 HOH 45 376 48 HOH HOH E . F 6 HOH 46 377 49 HOH HOH E . F 6 HOH 47 378 50 HOH HOH E . F 6 HOH 48 379 51 HOH HOH E . F 6 HOH 49 380 53 HOH HOH E . F 6 HOH 50 381 54 HOH HOH E . F 6 HOH 51 382 55 HOH HOH E . F 6 HOH 52 383 56 HOH HOH E . F 6 HOH 53 384 57 HOH HOH E . F 6 HOH 54 385 58 HOH HOH E . F 6 HOH 55 386 59 HOH HOH E . F 6 HOH 56 387 62 HOH HOH E . F 6 HOH 57 388 63 HOH HOH E . F 6 HOH 58 389 64 HOH HOH E . F 6 HOH 59 390 65 HOH HOH E . F 6 HOH 60 391 66 HOH HOH E . F 6 HOH 61 392 67 HOH HOH E . F 6 HOH 62 393 68 HOH HOH E . F 6 HOH 63 394 69 HOH HOH E . F 6 HOH 64 395 71 HOH HOH E . F 6 HOH 65 396 72 HOH HOH E . F 6 HOH 66 397 73 HOH HOH E . F 6 HOH 67 398 74 HOH HOH E . F 6 HOH 68 399 75 HOH HOH E . F 6 HOH 69 400 76 HOH HOH E . F 6 HOH 70 401 77 HOH HOH E . F 6 HOH 71 402 78 HOH HOH E . F 6 HOH 72 403 79 HOH HOH E . F 6 HOH 73 404 80 HOH HOH E . F 6 HOH 74 405 82 HOH HOH E . F 6 HOH 75 406 83 HOH HOH E . F 6 HOH 76 407 85 HOH HOH E . F 6 HOH 77 408 86 HOH HOH E . F 6 HOH 78 409 87 HOH HOH E . F 6 HOH 79 410 88 HOH HOH E . F 6 HOH 80 411 89 HOH HOH E . F 6 HOH 81 412 90 HOH HOH E . F 6 HOH 82 413 92 HOH HOH E . F 6 HOH 83 414 93 HOH HOH E . F 6 HOH 84 415 94 HOH HOH E . F 6 HOH 85 416 95 HOH HOH E . F 6 HOH 86 417 96 HOH HOH E . F 6 HOH 87 418 97 HOH HOH E . F 6 HOH 88 419 98 HOH HOH E . F 6 HOH 89 420 99 HOH HOH E . F 6 HOH 90 421 100 HOH HOH E . F 6 HOH 91 422 101 HOH HOH E . F 6 HOH 92 423 102 HOH HOH E . F 6 HOH 93 424 103 HOH HOH E . F 6 HOH 94 425 104 HOH HOH E . F 6 HOH 95 426 105 HOH HOH E . F 6 HOH 96 427 106 HOH HOH E . F 6 HOH 97 428 107 HOH HOH E . F 6 HOH 98 429 109 HOH HOH E . F 6 HOH 99 430 110 HOH HOH E . F 6 HOH 100 431 112 HOH HOH E . F 6 HOH 101 432 113 HOH HOH E . F 6 HOH 102 433 114 HOH HOH E . F 6 HOH 103 434 115 HOH HOH E . F 6 HOH 104 435 116 HOH HOH E . F 6 HOH 105 436 118 HOH HOH E . F 6 HOH 106 437 119 HOH HOH E . F 6 HOH 107 438 120 HOH HOH E . F 6 HOH 108 439 121 HOH HOH E . F 6 HOH 109 440 122 HOH HOH E . F 6 HOH 110 441 124 HOH HOH E . F 6 HOH 111 442 125 HOH HOH E . F 6 HOH 112 443 126 HOH HOH E . F 6 HOH 113 444 127 HOH HOH E . F 6 HOH 114 445 128 HOH HOH E . F 6 HOH 115 446 131 HOH HOH E . F 6 HOH 116 447 132 HOH HOH E . F 6 HOH 117 448 134 HOH HOH E . F 6 HOH 118 449 137 HOH HOH E . F 6 HOH 119 450 139 HOH HOH E . F 6 HOH 120 451 140 HOH HOH E . F 6 HOH 121 452 141 HOH HOH E . F 6 HOH 122 453 142 HOH HOH E . F 6 HOH 123 454 143 HOH HOH E . F 6 HOH 124 455 144 HOH HOH E . F 6 HOH 125 456 146 HOH HOH E . F 6 HOH 126 457 147 HOH HOH E . F 6 HOH 127 458 148 HOH HOH E . F 6 HOH 128 459 150 HOH HOH E . F 6 HOH 129 460 151 HOH HOH E . F 6 HOH 130 461 152 HOH HOH E . F 6 HOH 131 462 153 HOH HOH E . F 6 HOH 132 463 154 HOH HOH E . F 6 HOH 133 464 156 HOH HOH E . F 6 HOH 134 465 161 HOH HOH E . F 6 HOH 135 466 162 HOH HOH E . F 6 HOH 136 467 164 HOH HOH E . F 6 HOH 137 468 165 HOH HOH E . F 6 HOH 138 469 168 HOH HOH E . F 6 HOH 139 470 169 HOH HOH E . F 6 HOH 140 471 173 HOH HOH E . F 6 HOH 141 472 174 HOH HOH E . F 6 HOH 142 473 176 HOH HOH E . F 6 HOH 143 474 177 HOH HOH E . F 6 HOH 144 475 178 HOH HOH E . F 6 HOH 145 476 179 HOH HOH E . F 6 HOH 146 477 182 HOH HOH E . F 6 HOH 147 478 185 HOH HOH E . F 6 HOH 148 479 186 HOH HOH E . F 6 HOH 149 480 187 HOH HOH E . F 6 HOH 150 481 188 HOH HOH E . F 6 HOH 151 482 191 HOH HOH E . F 6 HOH 152 483 192 HOH HOH E . F 6 HOH 153 484 193 HOH HOH E . F 6 HOH 154 485 197 HOH HOH E . F 6 HOH 155 486 198 HOH HOH E . F 6 HOH 156 487 199 HOH HOH E . F 6 HOH 157 488 201 HOH HOH E . F 6 HOH 158 489 202 HOH HOH E . F 6 HOH 159 490 204 HOH HOH E . F 6 HOH 160 491 205 HOH HOH E . F 6 HOH 161 492 206 HOH HOH E . F 6 HOH 162 493 207 HOH HOH E . F 6 HOH 163 494 208 HOH HOH E . F 6 HOH 164 495 209 HOH HOH E . F 6 HOH 165 496 210 HOH HOH E . F 6 HOH 166 497 211 HOH HOH E . F 6 HOH 167 498 212 HOH HOH E . F 6 HOH 168 499 213 HOH HOH E . F 6 HOH 169 500 214 HOH HOH E . F 6 HOH 170 501 215 HOH HOH E . F 6 HOH 171 502 216 HOH HOH E . F 6 HOH 172 503 217 HOH HOH E . F 6 HOH 173 504 218 HOH HOH E . F 6 HOH 174 505 219 HOH HOH E . F 6 HOH 175 506 220 HOH HOH E . F 6 HOH 176 507 221 HOH HOH E . F 6 HOH 177 508 222 HOH HOH E . F 6 HOH 178 509 223 HOH HOH E . F 6 HOH 179 510 224 HOH HOH E . F 6 HOH 180 511 225 HOH HOH E . F 6 HOH 181 512 226 HOH HOH E . F 6 HOH 182 513 227 HOH HOH E . F 6 HOH 183 514 228 HOH HOH E . F 6 HOH 184 515 229 HOH HOH E . F 6 HOH 185 516 230 HOH HOH E . F 6 HOH 186 517 231 HOH HOH E . F 6 HOH 187 518 232 HOH HOH E . F 6 HOH 188 519 233 HOH HOH E . F 6 HOH 189 520 234 HOH HOH E . F 6 HOH 190 521 235 HOH HOH E . F 6 HOH 191 522 236 HOH HOH E . F 6 HOH 192 523 237 HOH HOH E . F 6 HOH 193 524 238 HOH HOH E . F 6 HOH 194 525 239 HOH HOH E . F 6 HOH 195 526 240 HOH HOH E . F 6 HOH 196 527 241 HOH HOH E . F 6 HOH 197 528 242 HOH HOH E . F 6 HOH 198 529 243 HOH HOH E . F 6 HOH 199 530 244 HOH HOH E . F 6 HOH 200 531 245 HOH HOH E . F 6 HOH 201 532 246 HOH HOH E . F 6 HOH 202 533 247 HOH HOH E . F 6 HOH 203 534 248 HOH HOH E . F 6 HOH 204 535 249 HOH HOH E . F 6 HOH 205 536 250 HOH HOH E . F 6 HOH 206 537 251 HOH HOH E . F 6 HOH 207 538 252 HOH HOH E . F 6 HOH 208 539 253 HOH HOH E . F 6 HOH 209 540 254 HOH HOH E . F 6 HOH 210 541 255 HOH HOH E . F 6 HOH 211 542 256 HOH HOH E . F 6 HOH 212 543 257 HOH HOH E . F 6 HOH 213 544 258 HOH HOH E . F 6 HOH 214 545 259 HOH HOH E . F 6 HOH 215 546 260 HOH HOH E . F 6 HOH 216 547 261 HOH HOH E . F 6 HOH 217 548 262 HOH HOH E . F 6 HOH 218 549 263 HOH HOH E . F 6 HOH 219 550 264 HOH HOH E . F 6 HOH 220 551 265 HOH HOH E . F 6 HOH 221 552 266 HOH HOH E . F 6 HOH 222 553 267 HOH HOH E . F 6 HOH 223 554 268 HOH HOH E . F 6 HOH 224 555 269 HOH HOH E . F 6 HOH 225 556 270 HOH HOH E . F 6 HOH 226 557 271 HOH HOH E . F 6 HOH 227 558 272 HOH HOH E . F 6 HOH 228 559 273 HOH HOH E . F 6 HOH 229 560 274 HOH HOH E . F 6 HOH 230 561 275 HOH HOH E . F 6 HOH 231 562 276 HOH HOH E . F 6 HOH 232 563 277 HOH HOH E . F 6 HOH 233 564 278 HOH HOH E . F 6 HOH 234 565 279 HOH HOH E . F 6 HOH 235 566 280 HOH HOH E . F 6 HOH 236 567 281 HOH HOH E . F 6 HOH 237 568 282 HOH HOH E . F 6 HOH 238 569 283 HOH HOH E . F 6 HOH 239 570 284 HOH HOH E . F 6 HOH 240 571 285 HOH HOH E . F 6 HOH 241 572 286 HOH HOH E . F 6 HOH 242 573 287 HOH HOH E . F 6 HOH 243 574 288 HOH HOH E . F 6 HOH 244 575 289 HOH HOH E . F 6 HOH 245 576 290 HOH HOH E . F 6 HOH 246 577 291 HOH HOH E . F 6 HOH 247 578 292 HOH HOH E . F 6 HOH 248 579 293 HOH HOH E . F 6 HOH 249 580 294 HOH HOH E . F 6 HOH 250 581 295 HOH HOH E . F 6 HOH 251 582 296 HOH HOH E . F 6 HOH 252 583 297 HOH HOH E . F 6 HOH 253 584 298 HOH HOH E . F 6 HOH 254 585 299 HOH HOH E . F 6 HOH 255 586 300 HOH HOH E . F 6 HOH 256 587 301 HOH HOH E . F 6 HOH 257 588 302 HOH HOH E . F 6 HOH 258 589 303 HOH HOH E . F 6 HOH 259 590 304 HOH HOH E . F 6 HOH 260 591 305 HOH HOH E . F 6 HOH 261 592 306 HOH HOH E . F 6 HOH 262 593 307 HOH HOH E . F 6 HOH 263 594 308 HOH HOH E . F 6 HOH 264 595 309 HOH HOH E . F 6 HOH 265 596 310 HOH HOH E . F 6 HOH 266 597 311 HOH HOH E . F 6 HOH 267 598 312 HOH HOH E . F 6 HOH 268 599 313 HOH HOH E . F 6 HOH 269 600 314 HOH HOH E . F 6 HOH 270 601 315 HOH HOH E . F 6 HOH 271 602 316 HOH HOH E . F 6 HOH 272 603 317 HOH HOH E . F 6 HOH 273 604 318 HOH HOH E . F 6 HOH 274 605 319 HOH HOH E . F 6 HOH 275 606 52 HOH HOH E . F 6 HOH 276 607 203 HOH HOH E . # _pdbx_molecule_features.prd_id PRD_000659 _pdbx_molecule_features.name 'IVA-VAL-VAL-LEU(P)-(O)PHE-OME' _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000659 _pdbx_molecule.asym_id B # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A SER 3 E SER 3 ? SER 'GLYCOSYLATION SITE' 2 A THR 7 E THR 7 ? THR 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 E HOH 375 ? F HOH . 2 1 E HOH 605 ? F HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1993-10-31 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2012-12-12 5 'Structure model' 1 4 2019-07-17 6 'Structure model' 1 5 2019-08-14 7 'Structure model' 1 6 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 7 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Non-polymer description' 6 3 'Structure model' 'Structure summary' 7 3 'Structure model' 'Version format compliance' 8 4 'Structure model' Other 9 5 'Structure model' 'Data collection' 10 5 'Structure model' 'Derived calculations' 11 5 'Structure model' Other 12 5 'Structure model' 'Refinement description' 13 6 'Structure model' 'Data collection' 14 6 'Structure model' 'Refinement description' 15 7 'Structure model' Advisory 16 7 'Structure model' 'Data collection' 17 7 'Structure model' 'Derived calculations' 18 7 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' pdbx_database_status 2 5 'Structure model' software 3 5 'Structure model' struct_conn 4 6 'Structure model' software 5 7 'Structure model' chem_comp 6 7 'Structure model' database_PDB_caveat 7 7 'Structure model' entity 8 7 'Structure model' pdbx_chem_comp_identifier 9 7 'Structure model' pdbx_entity_nonpoly 10 7 'Structure model' struct_conn 11 7 'Structure model' struct_site 12 7 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_pdbx_database_status.process_site' 2 5 'Structure model' '_software.classification' 3 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 6 'Structure model' '_software.classification' 5 7 'Structure model' '_chem_comp.name' 6 7 'Structure model' '_chem_comp.type' 7 7 'Structure model' '_entity.pdbx_description' 8 7 'Structure model' '_pdbx_entity_nonpoly.name' 9 7 'Structure model' '_struct_conn.pdbx_role' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 PROLSQ refinement . ? 2 X-PLOR refinement . ? 3 X-PLOR phasing . ? 4 # _pdbx_entry_details.entry_id 1PPL _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;THE INHIBITOR SUBCOMPONENT ZPH HAS A MODIFIED LEUCINE IN WHICH THE CO GROUP HAS BEEN REPLACED WITH A PO2 GROUP. XYS IS POORLY DEFINED IN THE ELECTRON DENSITY ; _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O E HOH 422 ? ? O E HOH 508 ? ? 2.00 2 1 O E SER 281 ? ? O E HOH 506 ? ? 2.10 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CD E GLU 16 ? ? OE1 E GLU 16 ? ? 1.185 1.252 -0.067 0.011 N 2 1 CG E HIS 159 ? ? CD2 E HIS 159 ? ? 1.410 1.354 0.056 0.009 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CG E GLU 16 ? ? CD E GLU 16 ? ? OE1 E GLU 16 ? ? 134.14 118.30 15.84 2.00 N 2 1 CG E GLU 16 ? ? CD E GLU 16 ? ? OE2 E GLU 16 ? ? 102.14 118.30 -16.16 2.00 N 3 1 CB E TYR 17 ? ? CG E TYR 17 ? ? CD1 E TYR 17 ? ? 117.22 121.00 -3.78 0.60 N 4 1 CB E TYR 57 ? ? CG E TYR 57 ? ? CD1 E TYR 57 ? ? 116.95 121.00 -4.05 0.60 N 5 1 CB E ASN 58 ? ? CG E ASN 58 ? ? OD1 E ASN 58 ? ? 109.57 121.60 -12.03 2.00 N 6 1 CB E ASP 88 ? ? CG E ASP 88 ? ? OD2 E ASP 88 ? ? 124.48 118.30 6.18 0.90 N 7 1 O E SER 136 ? ? C E SER 136 ? ? N E GLN 137 ? ? 112.96 122.70 -9.74 1.60 Y 8 1 CB E PHE 141 ? ? CG E PHE 141 ? ? CD2 E PHE 141 ? ? 115.86 120.80 -4.94 0.70 N 9 1 CB E ASP 166 ? ? CG E ASP 166 ? ? OD2 E ASP 166 ? ? 111.53 118.30 -6.77 0.90 N 10 1 CB E PHE 167 ? ? CG E PHE 167 ? ? CD1 E PHE 167 ? ? 114.12 120.80 -6.68 0.70 N 11 1 CB E ASP 196 ? ? CG E ASP 196 ? ? OD1 E ASP 196 ? ? 109.70 118.30 -8.60 0.90 N 12 1 CB E ASP 213 ? ? CG E ASP 213 ? ? OD1 E ASP 213 ? ? 126.30 118.30 8.00 0.90 N 13 1 CB E ASP 222 ? ? CG E ASP 222 ? ? OD1 E ASP 222 ? ? 124.08 118.30 5.78 0.90 N 14 1 CB E ASP 222 ? ? CG E ASP 222 ? ? OD2 E ASP 222 ? ? 111.74 118.30 -6.56 0.90 N 15 1 CB E TYR 229 ? ? CG E TYR 229 ? ? CD2 E TYR 229 ? ? 117.35 121.00 -3.65 0.60 N 16 1 CB E ASP 255 ? ? CG E ASP 255 ? ? OD2 E ASP 255 ? ? 129.63 118.30 11.33 0.90 N 17 1 O E THR 266 ? ? C E THR 266 ? ? N E VAL 267 ? ? 132.47 122.70 9.77 1.60 Y 18 1 OD1 E ASP 279 ? ? CG E ASP 279 ? ? OD2 E ASP 279 ? ? 110.66 123.30 -12.64 1.90 N 19 1 CB E ASP 279 ? ? CG E ASP 279 ? ? OD2 E ASP 279 ? ? 134.49 118.30 16.19 0.90 N 20 1 N E SER 281 ? ? CA E SER 281 ? ? CB E SER 281 ? ? 101.19 110.50 -9.31 1.50 N 21 1 CA E GLY 292 ? ? C E GLY 292 ? ? O E GLY 292 ? ? 107.02 120.60 -13.58 1.80 N 22 1 CB E ASP 311 ? ? CG E ASP 311 ? ? OD2 E ASP 311 ? ? 109.12 118.30 -9.18 0.90 N 23 1 CA E ASP 313 ? ? CB E ASP 313 ? ? CG E ASP 313 ? ? 97.74 113.40 -15.66 2.20 N 24 1 OD1 E ASP 313 ? ? CG E ASP 313 ? ? OD2 E ASP 313 ? ? 137.92 123.30 14.62 1.90 N 25 1 CB E ASP 313 ? ? CG E ASP 313 ? ? OD2 E ASP 313 ? ? 104.36 118.30 -13.94 0.90 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id E _pdbx_validate_torsion.auth_seq_id 279 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -146.54 _pdbx_validate_torsion.psi 25.77 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 C1 ? E XYS 330 ? 'WRONG HAND' . 2 1 C2 ? E XYS 330 ? 'WRONG HAND' . 3 1 C3 ? E XYS 330 ? 'WRONG HAND' . 4 1 C4 ? E XYS 330 ? 'WRONG HAND' . # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man XYS 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DXylpa XYS 'COMMON NAME' GMML 1.0 a-D-xylopyranose XYS 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Xylp XYS 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Xyl # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'N-(3-methylbutanoyl)-L-valyl-N-{(1S)-1-[(R)-[(1R)-1-benzyl-2-methoxy-2-oxoethoxy](hydroxy)phosphoryl]-3-methylbutyl}-L- valinamide' 1Z7 3 alpha-D-mannopyranose MAN 4 alpha-D-xylopyranose XYS 5 'SULFATE ION' SO4 6 water HOH #