data_1PW5 # _entry.id 1PW5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1PW5 RCSB RCSB019624 WWPDB D_1000019624 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC4903 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1PW5 _pdbx_database_status.recvd_initial_deposition_date 2003-06-30 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Cuff, M.E.' 1 'Skarina, T.' 2 'Savchenko, A.' 3 'Edwards, A.' 4 'Joachimiak, A.' 5 'Midwest Center for Structural Genomics (MCSG)' 6 # _citation.id primary _citation.title 'putative nagD protein' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cuff, M.E.' 1 ? primary 'Skarina, T.' 2 ? primary 'Savchenko, A.' 3 ? primary 'Edwards, A.' 4 ? primary 'Joachimiak, A.' 5 ? # _cell.entry_id 1PW5 _cell.length_a 97.788 _cell.length_b 97.788 _cell.length_c 159.270 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1PW5 _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'nagD protein, putative' 28559.908 1 ? ? ? ? 2 non-polymer man 2-acetamido-2-deoxy-alpha-D-glucopyranose 221.208 1 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 4 water nat water 18.015 88 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)LDKIELFILD(MSE)DGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRN(MSE)GVDVPDD AVVTSGEITAEH(MSE)LKRFGRCRIFLLGTPQLKKVFEAYGHVIDEENPDFVVLGFDKTLTYERLKKACILLRKGKFYI ATHPDINCPSKEGPVPDAGSI(MSE)AAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKER(MSE)A(MSE)VGDRLYT DVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGE ; _entity_poly.pdbx_seq_one_letter_code_can ;MLDKIELFILDMDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDDAVVTSGEITAEH MLKRFGRCRIFLLGTPQLKKVFEAYGHVIDEENPDFVVLGFDKTLTYERLKKACILLRKGKFYIATHPDINCPSKEGPVP DAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERA ETKPDFVFKNLGE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier APC4903 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 LEU n 1 3 ASP n 1 4 LYS n 1 5 ILE n 1 6 GLU n 1 7 LEU n 1 8 PHE n 1 9 ILE n 1 10 LEU n 1 11 ASP n 1 12 MSE n 1 13 ASP n 1 14 GLY n 1 15 THR n 1 16 PHE n 1 17 TYR n 1 18 LEU n 1 19 ASP n 1 20 ASP n 1 21 SER n 1 22 LEU n 1 23 LEU n 1 24 PRO n 1 25 GLY n 1 26 SER n 1 27 LEU n 1 28 GLU n 1 29 PHE n 1 30 LEU n 1 31 GLU n 1 32 THR n 1 33 LEU n 1 34 LYS n 1 35 GLU n 1 36 LYS n 1 37 ASN n 1 38 LYS n 1 39 ARG n 1 40 PHE n 1 41 VAL n 1 42 PHE n 1 43 PHE n 1 44 THR n 1 45 ASN n 1 46 ASN n 1 47 SER n 1 48 SER n 1 49 LEU n 1 50 GLY n 1 51 ALA n 1 52 GLN n 1 53 ASP n 1 54 TYR n 1 55 VAL n 1 56 ARG n 1 57 LYS n 1 58 LEU n 1 59 ARG n 1 60 ASN n 1 61 MSE n 1 62 GLY n 1 63 VAL n 1 64 ASP n 1 65 VAL n 1 66 PRO n 1 67 ASP n 1 68 ASP n 1 69 ALA n 1 70 VAL n 1 71 VAL n 1 72 THR n 1 73 SER n 1 74 GLY n 1 75 GLU n 1 76 ILE n 1 77 THR n 1 78 ALA n 1 79 GLU n 1 80 HIS n 1 81 MSE n 1 82 LEU n 1 83 LYS n 1 84 ARG n 1 85 PHE n 1 86 GLY n 1 87 ARG n 1 88 CYS n 1 89 ARG n 1 90 ILE n 1 91 PHE n 1 92 LEU n 1 93 LEU n 1 94 GLY n 1 95 THR n 1 96 PRO n 1 97 GLN n 1 98 LEU n 1 99 LYS n 1 100 LYS n 1 101 VAL n 1 102 PHE n 1 103 GLU n 1 104 ALA n 1 105 TYR n 1 106 GLY n 1 107 HIS n 1 108 VAL n 1 109 ILE n 1 110 ASP n 1 111 GLU n 1 112 GLU n 1 113 ASN n 1 114 PRO n 1 115 ASP n 1 116 PHE n 1 117 VAL n 1 118 VAL n 1 119 LEU n 1 120 GLY n 1 121 PHE n 1 122 ASP n 1 123 LYS n 1 124 THR n 1 125 LEU n 1 126 THR n 1 127 TYR n 1 128 GLU n 1 129 ARG n 1 130 LEU n 1 131 LYS n 1 132 LYS n 1 133 ALA n 1 134 CYS n 1 135 ILE n 1 136 LEU n 1 137 LEU n 1 138 ARG n 1 139 LYS n 1 140 GLY n 1 141 LYS n 1 142 PHE n 1 143 TYR n 1 144 ILE n 1 145 ALA n 1 146 THR n 1 147 HIS n 1 148 PRO n 1 149 ASP n 1 150 ILE n 1 151 ASN n 1 152 CYS n 1 153 PRO n 1 154 SER n 1 155 LYS n 1 156 GLU n 1 157 GLY n 1 158 PRO n 1 159 VAL n 1 160 PRO n 1 161 ASP n 1 162 ALA n 1 163 GLY n 1 164 SER n 1 165 ILE n 1 166 MSE n 1 167 ALA n 1 168 ALA n 1 169 ILE n 1 170 GLU n 1 171 ALA n 1 172 SER n 1 173 THR n 1 174 GLY n 1 175 ARG n 1 176 LYS n 1 177 PRO n 1 178 ASP n 1 179 LEU n 1 180 ILE n 1 181 ALA n 1 182 GLY n 1 183 LYS n 1 184 PRO n 1 185 ASN n 1 186 PRO n 1 187 LEU n 1 188 VAL n 1 189 VAL n 1 190 ASP n 1 191 VAL n 1 192 ILE n 1 193 SER n 1 194 GLU n 1 195 LYS n 1 196 PHE n 1 197 GLY n 1 198 VAL n 1 199 PRO n 1 200 LYS n 1 201 GLU n 1 202 ARG n 1 203 MSE n 1 204 ALA n 1 205 MSE n 1 206 VAL n 1 207 GLY n 1 208 ASP n 1 209 ARG n 1 210 LEU n 1 211 TYR n 1 212 THR n 1 213 ASP n 1 214 VAL n 1 215 LYS n 1 216 LEU n 1 217 GLY n 1 218 LYS n 1 219 ASN n 1 220 ALA n 1 221 GLY n 1 222 ILE n 1 223 VAL n 1 224 SER n 1 225 ILE n 1 226 LEU n 1 227 VAL n 1 228 LEU n 1 229 THR n 1 230 GLY n 1 231 GLU n 1 232 THR n 1 233 THR n 1 234 PRO n 1 235 GLU n 1 236 ASP n 1 237 LEU n 1 238 GLU n 1 239 ARG n 1 240 ALA n 1 241 GLU n 1 242 THR n 1 243 LYS n 1 244 PRO n 1 245 ASP n 1 246 PHE n 1 247 VAL n 1 248 PHE n 1 249 LYS n 1 250 ASN n 1 251 LEU n 1 252 GLY n 1 253 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Thermotoga _entity_src_gen.pdbx_gene_src_gene TM1742 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermotoga maritima' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2336 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9X264_THEMA _struct_ref.pdbx_db_accession Q9X264 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MLDKIELFILDMDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDDAVVTSGEITAEH MLKRFGRCRIFLLGTPQLKKVFEAYGHVIDEENPDFVVLGFDKTLTYERLKKACILLRKGKFYIATHPDINCPSKEGPVP DAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERA ETKPDFVFKNLGE ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1PW5 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 253 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9X264 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 253 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 253 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1PW5 MSE A 1 ? UNP Q9X264 MET 1 'modified residue' 1 1 1 1PW5 MSE A 12 ? UNP Q9X264 MET 12 'modified residue' 12 2 1 1PW5 MSE A 61 ? UNP Q9X264 MET 61 'modified residue' 61 3 1 1PW5 MSE A 81 ? UNP Q9X264 MET 81 'modified residue' 81 4 1 1PW5 MSE A 166 ? UNP Q9X264 MET 166 'modified residue' 166 5 1 1PW5 MSE A 203 ? UNP Q9X264 MET 203 'modified residue' 203 6 1 1PW5 MSE A 205 ? UNP Q9X264 MET 205 'modified residue' 205 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NDG 'D-saccharide, alpha linking' . 2-acetamido-2-deoxy-alpha-D-glucopyranose ? 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1PW5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol ? _exptl_crystal.density_Matthews ? _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'amonium sulfate, sodium cacodylate, ethylene glycol, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 150 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type SBC-2 _diffrn_detector.pdbx_collection_date 2002-07-26 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal Si(111)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97929 1.0 2 0.97918 1.0 3 0.96396 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97929,0.97918,0.96396 # _reflns.entry_id 1PW5 _reflns.d_resolution_high 2.80 _reflns.d_resolution_low 28.93 _reflns.limit_h_max 34 _reflns.limit_h_min 0 _reflns.limit_k_max 24 _reflns.limit_k_min 0 _reflns.limit_l_max 56 _reflns.limit_l_min 0 _reflns.number_all 18344 _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_F_max 127621.03 _reflns.observed_criterion_F_min 0.200000 _reflns.B_iso_Wilson_estimate 70.6 _reflns.number_obs 18344 _reflns.percent_possible_obs ? _reflns.observed_criterion_sigma_I ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 1PW5 _refine.ls_number_reflns_all 19675 _refine.ls_number_reflns_obs 16773 _refine.ls_percent_reflns_obs 85.3 _refine.ls_d_res_high 2.80 _refine.ls_d_res_low 28.93 _refine.B_iso_min 29.03 _refine.B_iso_max 150.17 _refine.B_iso_mean 75.24 _refine.occupancy_min 1.00 _refine.occupancy_max 1.00 _refine.aniso_B[1][1] 15.85 _refine.aniso_B[2][2] 15.85 _refine.aniso_B[3][3] -31.71 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_param_bsol 54.6016 _refine.solvent_model_param_ksol 0.297685 _refine.solvent_model_details 'CNS bulk solvent model used' _refine.ls_R_factor_R_work 0.244 _refine.ls_R_factor_R_free 0.279 _refine.ls_R_factor_R_free_error 0.010 _refine.ls_number_reflns_R_free 844 _refine.ls_percent_reflns_R_free 5.0 _refine.details ;The authors state there is extra electron density near/in the main chain between residues A239 and A242. It could be an extra amino acid (cloning artifact), or some sort of ligand or ligands. The authors are confident of the chain trace. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1PW5 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.pdbx_Luzzati_d_res_high_obs 2.80 _refine_analyze.Luzzati_coordinate_error_obs 0.43 _refine_analyze.Luzzati_sigma_a_obs 0.73 _refine_analyze.Luzzati_coordinate_error_free 0.49 _refine_analyze.Luzzati_sigma_a_free 0.71 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1982 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 25 _refine_hist.number_atoms_solvent 88 _refine_hist.number_atoms_total 2095 _refine_hist.d_res_high 2.80 _refine_hist.d_res_low 28.93 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.008 . ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.4 . ? ? 'X-RAY DIFFRACTION' ? x_torsion_deg 24.0 . ? ? 'X-RAY DIFFRACTION' ? x_torsion_impr_deg 0.93 . ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.R_factor_all 2.80 2.93 2397 1280 1219 53.4 0.446 0.472 0.060 61 4.8 . . 'X-RAY DIFFRACTION' . 2.93 3.08 2413 1754 1659 72.7 0.393 0.435 0.045 95 5.4 . . 'X-RAY DIFFRACTION' . 3.08 3.27 2418 2079 1984 86.0 0.32 0.337 0.035 95 4.6 . . 'X-RAY DIFFRACTION' . 3.27 3.53 2426 2186 2083 90.1 0.291 0.306 0.030 103 4.7 . . 'X-RAY DIFFRACTION' . 3.53 3.88 2435 2283 2177 93.8 0.249 0.279 0.027 106 4.6 . . 'X-RAY DIFFRACTION' . 3.88 4.44 2472 2351 2222 95.1 0.207 0.257 0.023 129 5.5 . . 'X-RAY DIFFRACTION' . 4.44 5.59 2478 2378 2250 96.0 0.187 0.23 0.020 128 5.4 . . 'X-RAY DIFFRACTION' . 5.59 28.93 2644 2462 2335 93.1 0.233 0.266 0.024 127 5.2 . . 'X-RAY DIFFRACTION' . # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 carbohydrate.param protein.top 'X-RAY DIFFRACTION' 2 water_rep.param carbohydrate.top 'X-RAY DIFFRACTION' 3 ion.param water.top 'X-RAY DIFFRACTION' 4 ? ion.top 'X-RAY DIFFRACTION' # _struct.entry_id 1PW5 _struct.title 'putative nagD protein' _struct.pdbx_descriptor PROTEIN _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1PW5 _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text ;nagD protein, T. maritima, structural genomics, PSI, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, UNKNOWN FUNCTION ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 25 ? LYS A 36 ? GLY A 25 LYS A 36 1 ? 12 HELX_P HELX_P2 2 GLY A 50 ? GLY A 62 ? GLY A 50 GLY A 62 1 ? 13 HELX_P HELX_P3 3 SER A 73 ? PHE A 85 ? SER A 73 PHE A 85 1 ? 13 HELX_P HELX_P4 4 THR A 95 ? TYR A 105 ? THR A 95 TYR A 105 1 ? 11 HELX_P HELX_P5 5 THR A 126 ? LYS A 139 ? THR A 126 LYS A 139 1 ? 14 HELX_P HELX_P6 6 ASP A 161 ? GLY A 174 ? ASP A 161 GLY A 174 1 ? 14 HELX_P HELX_P7 7 PRO A 186 ? GLY A 197 ? PRO A 186 GLY A 197 1 ? 12 HELX_P HELX_P8 8 PRO A 199 ? GLU A 201 ? PRO A 199 GLU A 201 5 ? 3 HELX_P HELX_P9 9 TYR A 211 ? GLY A 221 ? TYR A 211 GLY A 221 1 ? 11 HELX_P HELX_P10 10 ASP A 245 ? GLY A 252 ? ASP A 245 GLY A 252 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 1 C ? ? ? 1_555 A LEU 2 N ? ? A MSE 1 A LEU 2 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale2 covale both ? A ASP 11 C ? ? ? 1_555 A MSE 12 N ? ? A ASP 11 A MSE 12 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale3 covale both ? A MSE 12 C ? ? ? 1_555 A ASP 13 N ? ? A MSE 12 A ASP 13 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale4 covale both ? A ASN 60 C ? ? ? 1_555 A MSE 61 N ? ? A ASN 60 A MSE 61 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale5 covale both ? A MSE 61 C ? ? ? 1_555 A GLY 62 N ? ? A MSE 61 A GLY 62 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale6 covale both ? A HIS 80 C ? ? ? 1_555 A MSE 81 N ? ? A HIS 80 A MSE 81 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale7 covale both ? A MSE 81 C ? ? ? 1_555 A LEU 82 N ? ? A MSE 81 A LEU 82 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale8 covale both ? A ILE 165 C ? ? ? 1_555 A MSE 166 N ? ? A ILE 165 A MSE 166 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale9 covale both ? A MSE 166 C ? ? ? 1_555 A ALA 167 N ? ? A MSE 166 A ALA 167 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale10 covale both ? A ARG 202 C ? ? ? 1_555 A MSE 203 N ? ? A ARG 202 A MSE 203 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale11 covale both ? A MSE 203 C ? ? ? 1_555 A ALA 204 N ? ? A MSE 203 A ALA 204 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale12 covale both ? A ALA 204 C ? ? ? 1_555 A MSE 205 N ? ? A ALA 204 A MSE 205 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale13 covale both ? A MSE 205 C ? ? ? 1_555 A VAL 206 N ? ? A MSE 205 A VAL 206 1_555 ? ? ? ? ? ? ? 1.325 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LYS _struct_mon_prot_cis.label_seq_id 183 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LYS _struct_mon_prot_cis.auth_seq_id 183 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 184 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 184 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.46 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 2 ? C ? 5 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel C 1 2 ? parallel C 2 3 ? parallel C 3 4 ? parallel C 4 5 ? parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 70 ? THR A 72 ? VAL A 70 THR A 72 A 2 ARG A 39 ? THR A 44 ? ARG A 39 THR A 44 A 3 LEU A 7 ? LEU A 10 ? LEU A 7 LEU A 10 A 4 MSE A 203 ? GLY A 207 ? MSE A 203 GLY A 207 A 5 VAL A 223 ? VAL A 227 ? VAL A 223 VAL A 227 A 6 GLU A 241 ? LYS A 243 ? GLU A 241 LYS A 243 B 1 TYR A 17 ? LEU A 18 ? TYR A 17 LEU A 18 B 2 SER A 21 ? LEU A 22 ? SER A 21 LEU A 22 C 1 VAL A 108 ? ILE A 109 ? VAL A 108 ILE A 109 C 2 ARG A 89 ? LEU A 93 ? ARG A 89 LEU A 93 C 3 PHE A 116 ? LEU A 119 ? PHE A 116 LEU A 119 C 4 PHE A 142 ? ALA A 145 ? PHE A 142 ALA A 145 C 5 LEU A 179 ? ILE A 180 ? LEU A 179 ILE A 180 D 1 ASN A 151 ? CYS A 152 ? ASN A 151 CYS A 152 D 2 VAL A 159 ? PRO A 160 ? VAL A 159 PRO A 160 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 71 ? O VAL A 71 N THR A 44 ? N THR A 44 A 2 3 O ARG A 39 ? O ARG A 39 N PHE A 8 ? N PHE A 8 A 3 4 N LEU A 7 ? N LEU A 7 O ALA A 204 ? O ALA A 204 A 4 5 N MSE A 205 ? N MSE A 205 O ILE A 225 ? O ILE A 225 A 5 6 N LEU A 226 ? N LEU A 226 O GLU A 241 ? O GLU A 241 B 1 2 N LEU A 18 ? N LEU A 18 O SER A 21 ? O SER A 21 C 1 2 O VAL A 108 ? O VAL A 108 N ILE A 90 ? N ILE A 90 C 2 3 N LEU A 93 ? N LEU A 93 O VAL A 118 ? O VAL A 118 C 3 4 N LEU A 119 ? N LEU A 119 O ILE A 144 ? O ILE A 144 C 4 5 N ALA A 145 ? N ALA A 145 O LEU A 179 ? O LEU A 179 D 1 2 N CYS A 152 ? N CYS A 152 O VAL A 159 ? O VAL A 159 # _atom_sites.entry_id 1PW5 _atom_sites.fract_transf_matrix[1][1] 0.010226 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010226 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006279 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 1 MSE MSE A . n A 1 2 LEU 2 2 2 LEU LEU A . n A 1 3 ASP 3 3 3 ASP ASP A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 ILE 5 5 5 ILE ILE A . n A 1 6 GLU 6 6 6 GLU GLU A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 PHE 8 8 8 PHE PHE A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 ASP 11 11 11 ASP ASP A . n A 1 12 MSE 12 12 12 MSE MSE A . n A 1 13 ASP 13 13 13 ASP ASP A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 PHE 16 16 16 PHE PHE A . n A 1 17 TYR 17 17 17 TYR TYR A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 ASP 19 19 19 ASP ASP A . n A 1 20 ASP 20 20 20 ASP ASP A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 PRO 24 24 24 PRO PRO A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 GLU 28 28 28 GLU GLU A . n A 1 29 PHE 29 29 29 PHE PHE A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 GLU 31 31 31 GLU GLU A . n A 1 32 THR 32 32 32 THR THR A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 LYS 34 34 34 LYS LYS A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 LYS 36 36 36 LYS LYS A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 LYS 38 38 38 LYS LYS A . n A 1 39 ARG 39 39 39 ARG ARG A . n A 1 40 PHE 40 40 40 PHE PHE A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 PHE 42 42 42 PHE PHE A . n A 1 43 PHE 43 43 43 PHE PHE A . n A 1 44 THR 44 44 44 THR THR A . n A 1 45 ASN 45 45 45 ASN ASN A . n A 1 46 ASN 46 46 46 ASN ASN A . n A 1 47 SER 47 47 47 SER SER A . n A 1 48 SER 48 48 48 SER SER A . n A 1 49 LEU 49 49 49 LEU LEU A . n A 1 50 GLY 50 50 50 GLY GLY A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 GLN 52 52 52 GLN GLN A . n A 1 53 ASP 53 53 53 ASP ASP A . n A 1 54 TYR 54 54 54 TYR TYR A . n A 1 55 VAL 55 55 55 VAL VAL A . n A 1 56 ARG 56 56 56 ARG ARG A . n A 1 57 LYS 57 57 57 LYS LYS A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 ARG 59 59 59 ARG ARG A . n A 1 60 ASN 60 60 60 ASN ASN A . n A 1 61 MSE 61 61 61 MSE MSE A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 ASP 64 64 64 ASP ASP A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 PRO 66 66 66 PRO PRO A . n A 1 67 ASP 67 67 67 ASP ASP A . n A 1 68 ASP 68 68 68 ASP ASP A . n A 1 69 ALA 69 69 69 ALA ALA A . n A 1 70 VAL 70 70 70 VAL VAL A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 THR 72 72 72 THR THR A . n A 1 73 SER 73 73 73 SER SER A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 GLU 75 75 75 GLU GLU A . n A 1 76 ILE 76 76 76 ILE ILE A . n A 1 77 THR 77 77 77 THR THR A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 GLU 79 79 79 GLU GLU A . n A 1 80 HIS 80 80 80 HIS HIS A . n A 1 81 MSE 81 81 81 MSE MSE A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 ARG 84 84 84 ARG ARG A . n A 1 85 PHE 85 85 85 PHE PHE A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 ARG 87 87 87 ARG ARG A . n A 1 88 CYS 88 88 88 CYS CYS A . n A 1 89 ARG 89 89 89 ARG ARG A . n A 1 90 ILE 90 90 90 ILE ILE A . n A 1 91 PHE 91 91 91 PHE PHE A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 THR 95 95 95 THR THR A . n A 1 96 PRO 96 96 96 PRO PRO A . n A 1 97 GLN 97 97 97 GLN GLN A . n A 1 98 LEU 98 98 98 LEU LEU A . n A 1 99 LYS 99 99 99 LYS LYS A . n A 1 100 LYS 100 100 100 LYS LYS A . n A 1 101 VAL 101 101 101 VAL VAL A . n A 1 102 PHE 102 102 102 PHE PHE A . n A 1 103 GLU 103 103 103 GLU GLU A . n A 1 104 ALA 104 104 104 ALA ALA A . n A 1 105 TYR 105 105 105 TYR TYR A . n A 1 106 GLY 106 106 106 GLY GLY A . n A 1 107 HIS 107 107 107 HIS HIS A . n A 1 108 VAL 108 108 108 VAL VAL A . n A 1 109 ILE 109 109 109 ILE ILE A . n A 1 110 ASP 110 110 110 ASP ASP A . n A 1 111 GLU 111 111 111 GLU GLU A . n A 1 112 GLU 112 112 112 GLU GLU A . n A 1 113 ASN 113 113 113 ASN ASN A . n A 1 114 PRO 114 114 114 PRO PRO A . n A 1 115 ASP 115 115 115 ASP ASP A . n A 1 116 PHE 116 116 116 PHE PHE A . n A 1 117 VAL 117 117 117 VAL VAL A . n A 1 118 VAL 118 118 118 VAL VAL A . n A 1 119 LEU 119 119 119 LEU LEU A . n A 1 120 GLY 120 120 120 GLY GLY A . n A 1 121 PHE 121 121 121 PHE PHE A . n A 1 122 ASP 122 122 122 ASP ASP A . n A 1 123 LYS 123 123 123 LYS LYS A . n A 1 124 THR 124 124 124 THR THR A . n A 1 125 LEU 125 125 125 LEU LEU A . n A 1 126 THR 126 126 126 THR THR A . n A 1 127 TYR 127 127 127 TYR TYR A . n A 1 128 GLU 128 128 128 GLU GLU A . n A 1 129 ARG 129 129 129 ARG ARG A . n A 1 130 LEU 130 130 130 LEU LEU A . n A 1 131 LYS 131 131 131 LYS LYS A . n A 1 132 LYS 132 132 132 LYS LYS A . n A 1 133 ALA 133 133 133 ALA ALA A . n A 1 134 CYS 134 134 134 CYS CYS A . n A 1 135 ILE 135 135 135 ILE ILE A . n A 1 136 LEU 136 136 136 LEU LEU A . n A 1 137 LEU 137 137 137 LEU LEU A . n A 1 138 ARG 138 138 138 ARG ARG A . n A 1 139 LYS 139 139 139 LYS LYS A . n A 1 140 GLY 140 140 140 GLY GLY A . n A 1 141 LYS 141 141 141 LYS LYS A . n A 1 142 PHE 142 142 142 PHE PHE A . n A 1 143 TYR 143 143 143 TYR TYR A . n A 1 144 ILE 144 144 144 ILE ILE A . n A 1 145 ALA 145 145 145 ALA ALA A . n A 1 146 THR 146 146 146 THR THR A . n A 1 147 HIS 147 147 147 HIS HIS A . n A 1 148 PRO 148 148 148 PRO PRO A . n A 1 149 ASP 149 149 149 ASP ASP A . n A 1 150 ILE 150 150 150 ILE ILE A . n A 1 151 ASN 151 151 151 ASN ASN A . n A 1 152 CYS 152 152 152 CYS CYS A . n A 1 153 PRO 153 153 153 PRO PRO A . n A 1 154 SER 154 154 154 SER SER A . n A 1 155 LYS 155 155 155 LYS LYS A . n A 1 156 GLU 156 156 156 GLU GLU A . n A 1 157 GLY 157 157 157 GLY GLY A . n A 1 158 PRO 158 158 158 PRO PRO A . n A 1 159 VAL 159 159 159 VAL VAL A . n A 1 160 PRO 160 160 160 PRO PRO A . n A 1 161 ASP 161 161 161 ASP ASP A . n A 1 162 ALA 162 162 162 ALA ALA A . n A 1 163 GLY 163 163 163 GLY GLY A . n A 1 164 SER 164 164 164 SER SER A . n A 1 165 ILE 165 165 165 ILE ILE A . n A 1 166 MSE 166 166 166 MSE MSE A . n A 1 167 ALA 167 167 167 ALA ALA A . n A 1 168 ALA 168 168 168 ALA ALA A . n A 1 169 ILE 169 169 169 ILE ILE A . n A 1 170 GLU 170 170 170 GLU GLU A . n A 1 171 ALA 171 171 171 ALA ALA A . n A 1 172 SER 172 172 172 SER SER A . n A 1 173 THR 173 173 173 THR THR A . n A 1 174 GLY 174 174 174 GLY GLY A . n A 1 175 ARG 175 175 175 ARG ARG A . n A 1 176 LYS 176 176 176 LYS LYS A . n A 1 177 PRO 177 177 177 PRO PRO A . n A 1 178 ASP 178 178 178 ASP ASP A . n A 1 179 LEU 179 179 179 LEU LEU A . n A 1 180 ILE 180 180 180 ILE ILE A . n A 1 181 ALA 181 181 181 ALA ALA A . n A 1 182 GLY 182 182 182 GLY GLY A . n A 1 183 LYS 183 183 183 LYS LYS A . n A 1 184 PRO 184 184 184 PRO PRO A . n A 1 185 ASN 185 185 185 ASN ASN A . n A 1 186 PRO 186 186 186 PRO PRO A . n A 1 187 LEU 187 187 187 LEU LEU A . n A 1 188 VAL 188 188 188 VAL VAL A . n A 1 189 VAL 189 189 189 VAL VAL A . n A 1 190 ASP 190 190 190 ASP ASP A . n A 1 191 VAL 191 191 191 VAL VAL A . n A 1 192 ILE 192 192 192 ILE ILE A . n A 1 193 SER 193 193 193 SER SER A . n A 1 194 GLU 194 194 194 GLU GLU A . n A 1 195 LYS 195 195 195 LYS LYS A . n A 1 196 PHE 196 196 196 PHE PHE A . n A 1 197 GLY 197 197 197 GLY GLY A . n A 1 198 VAL 198 198 198 VAL VAL A . n A 1 199 PRO 199 199 199 PRO PRO A . n A 1 200 LYS 200 200 200 LYS LYS A . n A 1 201 GLU 201 201 201 GLU GLU A . n A 1 202 ARG 202 202 202 ARG ARG A . n A 1 203 MSE 203 203 203 MSE MSE A . n A 1 204 ALA 204 204 204 ALA ALA A . n A 1 205 MSE 205 205 205 MSE MSE A . n A 1 206 VAL 206 206 206 VAL VAL A . n A 1 207 GLY 207 207 207 GLY GLY A . n A 1 208 ASP 208 208 208 ASP ASP A . n A 1 209 ARG 209 209 209 ARG ARG A . n A 1 210 LEU 210 210 210 LEU LEU A . n A 1 211 TYR 211 211 211 TYR TYR A . n A 1 212 THR 212 212 212 THR THR A . n A 1 213 ASP 213 213 213 ASP ASP A . n A 1 214 VAL 214 214 214 VAL VAL A . n A 1 215 LYS 215 215 215 LYS LYS A . n A 1 216 LEU 216 216 216 LEU LEU A . n A 1 217 GLY 217 217 217 GLY GLY A . n A 1 218 LYS 218 218 218 LYS LYS A . n A 1 219 ASN 219 219 219 ASN ASN A . n A 1 220 ALA 220 220 220 ALA ALA A . n A 1 221 GLY 221 221 221 GLY GLY A . n A 1 222 ILE 222 222 222 ILE ILE A . n A 1 223 VAL 223 223 223 VAL VAL A . n A 1 224 SER 224 224 224 SER SER A . n A 1 225 ILE 225 225 225 ILE ILE A . n A 1 226 LEU 226 226 226 LEU LEU A . n A 1 227 VAL 227 227 227 VAL VAL A . n A 1 228 LEU 228 228 228 LEU LEU A . n A 1 229 THR 229 229 229 THR THR A . n A 1 230 GLY 230 230 230 GLY GLY A . n A 1 231 GLU 231 231 231 GLU GLU A . n A 1 232 THR 232 232 232 THR THR A . n A 1 233 THR 233 233 233 THR THR A . n A 1 234 PRO 234 234 234 PRO PRO A . n A 1 235 GLU 235 235 235 GLU GLU A . n A 1 236 ASP 236 236 236 ASP ASP A . n A 1 237 LEU 237 237 237 LEU LEU A . n A 1 238 GLU 238 238 238 GLU GLU A . n A 1 239 ARG 239 239 239 ARG ARG A . n A 1 240 ALA 240 240 240 ALA ALA A . n A 1 241 GLU 241 241 241 GLU GLU A . n A 1 242 THR 242 242 242 THR THR A . n A 1 243 LYS 243 243 243 LYS LYS A . n A 1 244 PRO 244 244 244 PRO PRO A . n A 1 245 ASP 245 245 245 ASP ASP A . n A 1 246 PHE 246 246 246 PHE PHE A . n A 1 247 VAL 247 247 247 VAL VAL A . n A 1 248 PHE 248 248 248 PHE PHE A . n A 1 249 LYS 249 249 249 LYS LYS A . n A 1 250 ASN 250 250 250 ASN ASN A . n A 1 251 LEU 251 251 251 LEU LEU A . n A 1 252 GLY 252 252 252 GLY GLY A . n A 1 253 GLU 253 253 253 GLU GLU A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NDG 1 254 200 NDG NAG A . C 3 SO4 1 301 301 SO4 SO4 A . D 3 SO4 1 302 302 SO4 SO4 A . E 4 HOH 1 303 1 HOH HOH A . E 4 HOH 2 304 2 HOH HOH A . E 4 HOH 3 305 3 HOH HOH A . E 4 HOH 4 306 4 HOH HOH A . E 4 HOH 5 307 5 HOH HOH A . E 4 HOH 6 308 6 HOH HOH A . E 4 HOH 7 309 7 HOH HOH A . E 4 HOH 8 310 8 HOH HOH A . E 4 HOH 9 311 9 HOH HOH A . E 4 HOH 10 312 10 HOH HOH A . E 4 HOH 11 313 11 HOH HOH A . E 4 HOH 12 314 12 HOH HOH A . E 4 HOH 13 315 13 HOH HOH A . E 4 HOH 14 316 14 HOH HOH A . E 4 HOH 15 317 15 HOH HOH A . E 4 HOH 16 318 16 HOH HOH A . E 4 HOH 17 319 17 HOH HOH A . E 4 HOH 18 320 18 HOH HOH A . E 4 HOH 19 321 19 HOH HOH A . E 4 HOH 20 322 20 HOH HOH A . E 4 HOH 21 323 21 HOH HOH A . E 4 HOH 22 324 22 HOH HOH A . E 4 HOH 23 325 23 HOH HOH A . E 4 HOH 24 326 24 HOH HOH A . E 4 HOH 25 327 25 HOH HOH A . E 4 HOH 26 328 26 HOH HOH A . E 4 HOH 27 329 27 HOH HOH A . E 4 HOH 28 330 28 HOH HOH A . E 4 HOH 29 331 29 HOH HOH A . E 4 HOH 30 332 30 HOH HOH A . E 4 HOH 31 333 31 HOH HOH A . E 4 HOH 32 334 32 HOH HOH A . E 4 HOH 33 335 33 HOH HOH A . E 4 HOH 34 336 34 HOH HOH A . E 4 HOH 35 337 35 HOH HOH A . E 4 HOH 36 338 36 HOH HOH A . E 4 HOH 37 339 37 HOH HOH A . E 4 HOH 38 340 38 HOH HOH A . E 4 HOH 39 341 39 HOH HOH A . E 4 HOH 40 342 40 HOH HOH A . E 4 HOH 41 343 41 HOH HOH A . E 4 HOH 42 344 42 HOH HOH A . E 4 HOH 43 345 43 HOH HOH A . E 4 HOH 44 346 44 HOH HOH A . E 4 HOH 45 347 45 HOH HOH A . E 4 HOH 46 348 46 HOH HOH A . E 4 HOH 47 349 47 HOH HOH A . E 4 HOH 48 350 48 HOH HOH A . E 4 HOH 49 351 49 HOH HOH A . E 4 HOH 50 352 50 HOH HOH A . E 4 HOH 51 353 51 HOH HOH A . E 4 HOH 52 354 52 HOH HOH A . E 4 HOH 53 355 53 HOH HOH A . E 4 HOH 54 356 54 HOH HOH A . E 4 HOH 55 357 55 HOH HOH A . E 4 HOH 56 358 56 HOH HOH A . E 4 HOH 57 359 57 HOH HOH A . E 4 HOH 58 360 58 HOH HOH A . E 4 HOH 59 361 59 HOH HOH A . E 4 HOH 60 362 60 HOH HOH A . E 4 HOH 61 363 61 HOH HOH A . E 4 HOH 62 364 62 HOH HOH A . E 4 HOH 63 365 63 HOH HOH A . E 4 HOH 64 366 64 HOH HOH A . E 4 HOH 65 367 65 HOH HOH A . E 4 HOH 66 368 66 HOH HOH A . E 4 HOH 67 369 67 HOH HOH A . E 4 HOH 68 370 68 HOH HOH A . E 4 HOH 69 371 69 HOH HOH A . E 4 HOH 70 372 70 HOH HOH A . E 4 HOH 71 373 71 HOH HOH A . E 4 HOH 72 374 72 HOH HOH A . E 4 HOH 73 375 73 HOH HOH A . E 4 HOH 74 376 74 HOH HOH A . E 4 HOH 75 377 75 HOH HOH A . E 4 HOH 76 378 76 HOH HOH A . E 4 HOH 77 379 77 HOH HOH A . E 4 HOH 78 380 78 HOH HOH A . E 4 HOH 79 381 79 HOH HOH A . E 4 HOH 80 382 80 HOH HOH A . E 4 HOH 81 383 81 HOH HOH A . E 4 HOH 82 384 82 HOH HOH A . E 4 HOH 83 385 83 HOH HOH A . E 4 HOH 84 386 84 HOH HOH A . E 4 HOH 85 387 85 HOH HOH A . E 4 HOH 86 388 86 HOH HOH A . E 4 HOH 87 389 87 HOH HOH A . E 4 HOH 88 390 88 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 1 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 12 A MSE 12 ? MET SELENOMETHIONINE 3 A MSE 61 A MSE 61 ? MET SELENOMETHIONINE 4 A MSE 81 A MSE 81 ? MET SELENOMETHIONINE 5 A MSE 166 A MSE 166 ? MET SELENOMETHIONINE 6 A MSE 203 A MSE 203 ? MET SELENOMETHIONINE 7 A MSE 205 A MSE 205 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-03-02 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-11 5 'Structure model' 2 0 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Atomic model' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' 8 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' atom_site 3 5 'Structure model' chem_comp 4 5 'Structure model' entity 5 5 'Structure model' pdbx_chem_comp_identifier 6 5 'Structure model' pdbx_entity_nonpoly 7 5 'Structure model' struct_conn 8 5 'Structure model' struct_ref_seq_dif 9 5 'Structure model' struct_site 10 5 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.name' 2 5 'Structure model' '_atom_site.auth_atom_id' 3 5 'Structure model' '_atom_site.label_atom_id' 4 5 'Structure model' '_chem_comp.name' 5 5 'Structure model' '_chem_comp.type' 6 5 'Structure model' '_entity.pdbx_description' 7 5 'Structure model' '_pdbx_entity_nonpoly.name' 8 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 9 5 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.location _software.classification _software.language _software.citation_id _software.pdbx_ordinal CNS 1.1 1998 package 'Axel T. Brunger' axel.brunger@yale.edu . refinement Fortran ? 1 d*TREK . ? ? ? ? ? 'data reduction' ? ? 2 HKL-2000 . ? ? ? ? ? 'data reduction' ? ? 3 SCALEPACK . ? ? ? ? ? 'data scaling' ? ? 4 SOLVE . ? ? ? ? ? phasing ? ? 5 SHARP . ? ? ? ? ? phasing ? ? 6 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 C _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 LYS _pdbx_validate_rmsd_angle.auth_seq_id_1 243 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 N _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 PRO _pdbx_validate_rmsd_angle.auth_seq_id_2 244 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CA _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 PRO _pdbx_validate_rmsd_angle.auth_seq_id_3 244 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 128.87 _pdbx_validate_rmsd_angle.angle_target_value 119.30 _pdbx_validate_rmsd_angle.angle_deviation 9.57 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.50 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 2 ? ? 55.02 174.37 2 1 ASP A 3 ? ? 80.78 -11.97 3 1 MSE A 12 ? ? -111.23 -93.67 4 1 THR A 15 ? ? -122.68 -54.26 5 1 LYS A 36 ? ? -63.55 10.05 6 1 PRO A 66 ? ? -57.15 173.86 7 1 PHE A 85 ? ? -140.38 -24.78 8 1 GLU A 112 ? ? -65.99 -76.75 9 1 ASP A 149 ? ? -33.59 118.38 10 1 ASP A 161 ? ? -128.33 -166.07 11 1 THR A 233 ? ? -172.18 -60.91 12 1 ASP A 236 ? ? -167.46 -150.82 13 1 LEU A 237 ? ? 46.11 -128.63 14 1 ARG A 239 ? ? -122.70 -162.46 15 1 ALA A 240 ? ? -168.85 -125.54 16 1 ASP A 245 ? ? -155.53 -157.38 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NDG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAca NDG 'COMMON NAME' GMML 1.0 N-acetyl-a-D-glucopyranosamine NDG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-GlcpNAc NDG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 2-acetamido-2-deoxy-alpha-D-glucopyranose NDG 3 'SULFATE ION' SO4 4 water HOH #