data_1PXF # _entry.id 1PXF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1PXF RCSB RCSB019666 WWPDB D_1000019666 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2008-12-02 _pdbx_database_PDB_obs_spr.pdb_id 3ERS _pdbx_database_PDB_obs_spr.replace_pdb_id 1PXF _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.status_code OBS _pdbx_database_status.entry_id 1PXF _pdbx_database_status.recvd_initial_deposition_date 2003-07-03 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf OBS _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Swairjo, M.A.' 1 'Morales, A.J.' 2 'Wang, C.C.' 3 'Ortiz, A.R.' 4 'Schimmel, P.' 5 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Crystal Structure of Trbp111: a Structure-Specific tRNA-Binding Protein' 'Embo J.' 19 6287 6298 2000 EMJODG UK 0261-4189 0897 ? 11101501 10.1093/emboj/19.23.6287 1 'Structure-Specific tRNA-Binding Protein from the Extreme Thermophile Aquifex aeolicus' 'Embo J.' 18 3475 3483 1999 EMJODG UK 0261-4189 0897 ? ? 10.1093/emboj/18.12.3475 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Swairjo, M.A.' 1 primary 'Morales, A.J.' 2 primary 'Wang, C.C.' 3 primary 'Ortiz, A.R.' 4 primary 'Schimmel, P.' 5 1 'Morales, A.J.' 6 1 'Swairjo, M.A.' 7 1 'Schimmel, P.' 8 # _cell.entry_id 1PXF _cell.length_a 41.310 _cell.length_b 41.310 _cell.length_c 95.180 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1PXF _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Hypothetical protein ygjH' 12400.418 1 ? ? ? ? 2 water nat water 18.015 94 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;METVAYADFARLEMRVGKIVEVKRHENADKLYIVQVDVGQKTLQTVTSLVPYYSEEELMGKTVVVLCNLQKAKMRGETSE CMLLCAETDDGSESVLLTPERMMPAGVRVVA ; _entity_poly.pdbx_seq_one_letter_code_can ;METVAYADFARLEMRVGKIVEVKRHENADKLYIVQVDVGQKTLQTVTSLVPYYSEEELMGKTVVVLCNLQKAKMRGETSE CMLLCAETDDGSESVLLTPERMMPAGVRVVA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 THR n 1 4 VAL n 1 5 ALA n 1 6 TYR n 1 7 ALA n 1 8 ASP n 1 9 PHE n 1 10 ALA n 1 11 ARG n 1 12 LEU n 1 13 GLU n 1 14 MET n 1 15 ARG n 1 16 VAL n 1 17 GLY n 1 18 LYS n 1 19 ILE n 1 20 VAL n 1 21 GLU n 1 22 VAL n 1 23 LYS n 1 24 ARG n 1 25 HIS n 1 26 GLU n 1 27 ASN n 1 28 ALA n 1 29 ASP n 1 30 LYS n 1 31 LEU n 1 32 TYR n 1 33 ILE n 1 34 VAL n 1 35 GLN n 1 36 VAL n 1 37 ASP n 1 38 VAL n 1 39 GLY n 1 40 GLN n 1 41 LYS n 1 42 THR n 1 43 LEU n 1 44 GLN n 1 45 THR n 1 46 VAL n 1 47 THR n 1 48 SER n 1 49 LEU n 1 50 VAL n 1 51 PRO n 1 52 TYR n 1 53 TYR n 1 54 SER n 1 55 GLU n 1 56 GLU n 1 57 GLU n 1 58 LEU n 1 59 MET n 1 60 GLY n 1 61 LYS n 1 62 THR n 1 63 VAL n 1 64 VAL n 1 65 VAL n 1 66 LEU n 1 67 CYS n 1 68 ASN n 1 69 LEU n 1 70 GLN n 1 71 LYS n 1 72 ALA n 1 73 LYS n 1 74 MET n 1 75 ARG n 1 76 GLY n 1 77 GLU n 1 78 THR n 1 79 SER n 1 80 GLU n 1 81 CYS n 1 82 MET n 1 83 LEU n 1 84 LEU n 1 85 CYS n 1 86 ALA n 1 87 GLU n 1 88 THR n 1 89 ASP n 1 90 ASP n 1 91 GLY n 1 92 SER n 1 93 GLU n 1 94 SER n 1 95 VAL n 1 96 LEU n 1 97 LEU n 1 98 THR n 1 99 PRO n 1 100 GLU n 1 101 ARG n 1 102 MET n 1 103 MET n 1 104 PRO n 1 105 ALA n 1 106 GLY n 1 107 VAL n 1 108 ARG n 1 109 VAL n 1 110 VAL n 1 111 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene YGJH _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain TG1 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pTSMg22 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code YGJH_ECOLI _struct_ref.pdbx_db_accession P42589 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;METVAYADFARLEMRVGKIVEVKRHENADKLYIVQVDVGQKTLQTVTSLVPYYSEEELMGKTVVVLCNLQKAKMRGETSE CMLLCAETDDGSESVLLTPERMMPAGVRVV ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1PXF _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 110 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P42589 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 110 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 110 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 1PXF _struct_ref_seq_dif.mon_id ALA _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 111 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P42589 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'EXPRESSION TAG' _struct_ref_seq_dif.pdbx_auth_seq_num 111 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1PXF _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.89 _exptl_crystal.density_percent_sol 34.92 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 17 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details '20-25% PEG 1000, 1.0 M aqmmonium acetate, 0.1 M imidazole, 10mg/mL protein, VAPOR DIFFUSION, SITTING DROP, temperature 17K, pH 7.0' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 103.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1999-10-29 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator mirrors _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL7-1' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL7-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54 # _reflns.entry_id 1PXF _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.d_resolution_high 1.87 _reflns.d_resolution_low 30 _reflns.number_all ? _reflns.number_obs 8064 _reflns.percent_possible_obs 97.4 _reflns.pdbx_Rmerge_I_obs 0.034 _reflns.pdbx_Rsym_value 0.031 _reflns.pdbx_netI_over_sigmaI 19.0 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.87 _reflns_shell.d_res_low 1.94 _reflns_shell.percent_possible_all 96.1 _reflns_shell.Rmerge_I_obs 0.126 _reflns_shell.pdbx_Rsym_value 0.116 _reflns_shell.meanI_over_sigI_obs 13.6 _reflns_shell.pdbx_redundancy 5.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 769 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1PXF _refine.ls_d_res_high 1.87 _refine.ls_d_res_low 20.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_ls_sigma_I 0.0 _refine.ls_number_reflns_all 7989 _refine.ls_number_reflns_obs 7989 _refine.ls_number_reflns_R_free 799 _refine.ls_percent_reflns_obs 99.0 _refine.ls_R_factor_all 0.158 _refine.ls_R_factor_obs 0.158 _refine.ls_R_factor_R_work 0.149 _refine.ls_R_factor_R_free 0.198 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MIR and MAD' _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details 'random, 10% of data' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model isotropic _refine.B_iso_mean 20.0 _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1024 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 282 _refine_hist.number_atoms_total 1306 _refine_hist.d_res_high 1.87 _refine_hist.d_res_low 20.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d 1.73 ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1PXF _struct.title 'Crystal Structure of Trbp111: a Structure Specific tRNA Binding Protein' _struct.pdbx_descriptor 'Hypothetical protein ygjH' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1PXF _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' _struct_keywords.text 'oligonucleotide-oligosaccharide binding fold, OB fold, beta-barrel, RNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ;The asymmetric unit contains half a dimer. The dimer is the biologically active unit. The dimer two-fold axis is conincident with the crystallographic two-fold axis of space group P3(2)21. To generate the dimer apply the following transformation: rotation matrix -0.499747 -0.866171 0.000547 -0.866171 0.499747 -0.000445 0.000112 -0.000696 -1.000000 translation matrix 61.947891 35.812160 63.471508 ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 5 ? LEU A 12 ? ALA A 5 LEU A 12 1 ? 8 HELX_P HELX_P2 2 TYR A 53 ? MET A 59 ? TYR A 53 MET A 59 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 41 ? VAL A 46 ? LYS A 41 VAL A 46 A 2 ILE A 33 ? VAL A 38 ? ILE A 33 VAL A 38 A 3 MET A 14 ? ILE A 19 ? MET A 14 ILE A 19 A 4 THR A 62 ? LEU A 66 ? THR A 62 LEU A 66 B 1 CYS A 85 ? GLU A 87 ? CYS A 85 GLU A 87 B 2 SER A 94 ? LEU A 96 ? SER A 94 LEU A 96 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LEU A 43 ? O LEU A 43 N VAL A 36 ? N VAL A 36 A 2 3 O ASP A 37 ? O ASP A 37 N LYS A 18 ? N LYS A 18 A 3 4 N GLY A 17 ? N GLY A 17 O VAL A 63 ? O VAL A 63 B 1 2 N ALA A 86 ? N ALA A 86 O VAL A 95 ? O VAL A 95 # _database_PDB_matrix.entry_id 1PXF _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1PXF _atom_sites.fract_transf_matrix[1][1] 0.024207 _atom_sites.fract_transf_matrix[1][2] 0.013975 _atom_sites.fract_transf_matrix[1][3] -0.000001 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.027952 _atom_sites.fract_transf_matrix[2][3] -0.000001 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010506 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 GLU 2 2 2 GLU GLU A . n A 1 3 THR 3 3 3 THR THR A . n A 1 4 VAL 4 4 4 VAL VAL A . n A 1 5 ALA 5 5 5 ALA ALA A . n A 1 6 TYR 6 6 6 TYR TYR A . n A 1 7 ALA 7 7 7 ALA ALA A . n A 1 8 ASP 8 8 8 ASP ASP A . n A 1 9 PHE 9 9 9 PHE PHE A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 ARG 11 11 11 ARG ARG A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 GLU 13 13 13 GLU GLU A . n A 1 14 MET 14 14 14 MET MET A . n A 1 15 ARG 15 15 15 ARG ARG A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 LYS 18 18 18 LYS LYS A . n A 1 19 ILE 19 19 19 ILE ILE A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 VAL 22 22 22 VAL VAL A . n A 1 23 LYS 23 23 23 LYS LYS A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 HIS 25 25 25 HIS HIS A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 TYR 32 32 32 TYR TYR A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 VAL 34 34 34 VAL VAL A . n A 1 35 GLN 35 35 35 GLN GLN A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 ASP 37 37 37 ASP ASP A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 GLN 40 40 40 GLN GLN A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 THR 42 42 42 THR THR A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 GLN 44 44 44 GLN GLN A . n A 1 45 THR 45 45 45 THR THR A . n A 1 46 VAL 46 46 46 VAL VAL A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 SER 48 48 48 SER SER A . n A 1 49 LEU 49 49 49 LEU LEU A . n A 1 50 VAL 50 50 50 VAL VAL A . n A 1 51 PRO 51 51 51 PRO PRO A . n A 1 52 TYR 52 52 52 TYR TYR A . n A 1 53 TYR 53 53 53 TYR TYR A . n A 1 54 SER 54 54 54 SER SER A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 GLU 56 56 56 GLU GLU A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 MET 59 59 59 MET MET A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 THR 62 62 62 THR THR A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 CYS 67 67 67 CYS CYS A . n A 1 68 ASN 68 68 68 ASN ASN A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 GLN 70 70 70 GLN GLN A . n A 1 71 LYS 71 71 71 LYS LYS A . n A 1 72 ALA 72 72 72 ALA ALA A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 MET 74 74 74 MET MET A . n A 1 75 ARG 75 75 75 ARG ARG A . n A 1 76 GLY 76 76 76 GLY GLY A . n A 1 77 GLU 77 77 77 GLU GLU A . n A 1 78 THR 78 78 78 THR THR A . n A 1 79 SER 79 79 79 SER SER A . n A 1 80 GLU 80 80 80 GLU GLU A . n A 1 81 CYS 81 81 81 CYS CYS A . n A 1 82 MET 82 82 82 MET MET A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 CYS 85 85 85 CYS CYS A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 GLU 87 87 87 GLU GLU A . n A 1 88 THR 88 88 88 THR THR A . n A 1 89 ASP 89 89 89 ASP ASP A . n A 1 90 ASP 90 90 90 ASP ASP A . n A 1 91 GLY 91 91 91 GLY GLY A . n A 1 92 SER 92 92 92 SER SER A . n A 1 93 GLU 93 93 93 GLU GLU A . n A 1 94 SER 94 94 94 SER SER A . n A 1 95 VAL 95 95 95 VAL VAL A . n A 1 96 LEU 96 96 96 LEU LEU A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 THR 98 98 98 THR THR A . n A 1 99 PRO 99 99 99 PRO PRO A . n A 1 100 GLU 100 100 100 GLU GLU A . n A 1 101 ARG 101 101 101 ARG ARG A . n A 1 102 MET 102 102 102 MET MET A . n A 1 103 MET 103 103 103 MET MET A . n A 1 104 PRO 104 104 104 PRO PRO A . n A 1 105 ALA 105 105 105 ALA ALA A . n A 1 106 GLY 106 106 106 GLY GLY A . n A 1 107 VAL 107 107 107 VAL VAL A . n A 1 108 ARG 108 108 108 ARG ARG A . n A 1 109 VAL 109 109 109 VAL VAL A . n A 1 110 VAL 110 110 110 VAL VAL A . n A 1 111 ALA 111 111 111 ALA ALA A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 200 200 HOH TIP A . B 2 HOH 2 203 203 HOH TIP A . B 2 HOH 3 204 204 HOH TIP A . B 2 HOH 4 205 205 HOH TIP A . B 2 HOH 5 206 206 HOH TIP A . B 2 HOH 6 207 207 HOH TIP A . B 2 HOH 7 208 208 HOH TIP A . B 2 HOH 8 211 211 HOH TIP A . B 2 HOH 9 212 212 HOH TIP A . B 2 HOH 10 214 214 HOH TIP A . B 2 HOH 11 215 215 HOH TIP A . B 2 HOH 12 216 216 HOH TIP A . B 2 HOH 13 217 217 HOH TIP A . B 2 HOH 14 218 218 HOH TIP A . B 2 HOH 15 219 219 HOH TIP A . B 2 HOH 16 220 220 HOH TIP A . B 2 HOH 17 221 221 HOH TIP A . B 2 HOH 18 222 222 HOH TIP A . B 2 HOH 19 223 223 HOH TIP A . B 2 HOH 20 224 224 HOH TIP A . B 2 HOH 21 225 225 HOH TIP A . B 2 HOH 22 226 226 HOH TIP A . B 2 HOH 23 227 227 HOH TIP A . B 2 HOH 24 229 229 HOH TIP A . B 2 HOH 25 230 230 HOH TIP A . B 2 HOH 26 231 231 HOH TIP A . B 2 HOH 27 233 233 HOH TIP A . B 2 HOH 28 236 236 HOH TIP A . B 2 HOH 29 237 237 HOH TIP A . B 2 HOH 30 240 240 HOH TIP A . B 2 HOH 31 241 241 HOH TIP A . B 2 HOH 32 242 242 HOH TIP A . B 2 HOH 33 243 243 HOH TIP A . B 2 HOH 34 244 244 HOH TIP A . B 2 HOH 35 245 245 HOH TIP A . B 2 HOH 36 246 246 HOH TIP A . B 2 HOH 37 247 247 HOH TIP A . B 2 HOH 38 249 249 HOH TIP A . B 2 HOH 39 251 251 HOH TIP A . B 2 HOH 40 252 252 HOH TIP A . B 2 HOH 41 253 253 HOH TIP A . B 2 HOH 42 254 254 HOH TIP A . B 2 HOH 43 256 256 HOH TIP A . B 2 HOH 44 257 257 HOH TIP A . B 2 HOH 45 258 258 HOH TIP A . B 2 HOH 46 259 259 HOH TIP A . B 2 HOH 47 260 260 HOH TIP A . B 2 HOH 48 261 261 HOH TIP A . B 2 HOH 49 262 262 HOH TIP A . B 2 HOH 50 263 263 HOH TIP A . B 2 HOH 51 264 264 HOH TIP A . B 2 HOH 52 265 265 HOH TIP A . B 2 HOH 53 266 266 HOH TIP A . B 2 HOH 54 267 267 HOH TIP A . B 2 HOH 55 268 268 HOH TIP A . B 2 HOH 56 270 270 HOH TIP A . B 2 HOH 57 271 271 HOH TIP A . B 2 HOH 58 273 273 HOH TIP A . B 2 HOH 59 274 274 HOH TIP A . B 2 HOH 60 275 275 HOH TIP A . B 2 HOH 61 276 276 HOH TIP A . B 2 HOH 62 278 278 HOH TIP A . B 2 HOH 63 279 279 HOH TIP A . B 2 HOH 64 281 281 HOH TIP A . B 2 HOH 65 282 282 HOH TIP A . B 2 HOH 66 284 284 HOH TIP A . B 2 HOH 67 285 285 HOH TIP A . B 2 HOH 68 286 286 HOH TIP A . B 2 HOH 69 289 289 HOH TIP A . B 2 HOH 70 290 290 HOH TIP A . B 2 HOH 71 291 291 HOH TIP A . B 2 HOH 72 294 294 HOH TIP A . B 2 HOH 73 295 295 HOH TIP A . B 2 HOH 74 297 297 HOH TIP A . B 2 HOH 75 298 298 HOH TIP A . B 2 HOH 76 299 299 HOH TIP A . B 2 HOH 77 300 300 HOH TIP A . B 2 HOH 78 301 301 HOH TIP A . B 2 HOH 79 302 302 HOH TIP A . B 2 HOH 80 303 303 HOH TIP A . B 2 HOH 81 304 304 HOH TIP A . B 2 HOH 82 305 305 HOH TIP A . B 2 HOH 83 306 306 HOH TIP A . B 2 HOH 84 307 307 HOH TIP A . B 2 HOH 85 308 308 HOH TIP A . B 2 HOH 86 309 309 HOH TIP A . B 2 HOH 87 310 310 HOH TIP A . B 2 HOH 88 311 311 HOH TIP A . B 2 HOH 89 312 312 HOH TIP A . B 2 HOH 90 313 313 HOH TIP A . B 2 HOH 91 314 314 HOH TIP A . B 2 HOH 92 315 315 HOH TIP A . B 2 HOH 93 316 316 HOH TIP A . B 2 HOH 94 318 318 HOH TIP A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 6_765 -x+2,-x+y+1,-z+2/3 -0.5000000000 -0.8660254038 0.0000000000 61.9650000000 -0.8660254038 0.5000000000 0.0000000000 35.7755094303 0.0000000000 0.0000000000 -1.0000000000 63.4533333333 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-07-15 2 'Structure model' 1 1 2008-12-02 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data collection' . ? 1 SCALEPACK 'data reduction' . ? 2 SOLVE 'model building' . ? 3 SHARP 'model building' . ? 4 CNS refinement . ? 5 DENZO 'data reduction' . ? 6 SCALEPACK 'data scaling' . ? 7 SOLVE phasing . ? 8 SHARP phasing . ? 9 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 5 ? ? 156.36 -163.63 2 1 ASN A 27 ? ? -161.59 89.07 3 1 ALA A 28 ? ? -163.49 99.38 4 1 LEU A 31 ? ? -95.46 -80.28 5 1 TYR A 32 ? ? 42.88 77.84 6 1 VAL A 38 ? ? -111.01 66.69 7 1 PRO A 51 ? ? -55.92 84.97 8 1 TYR A 52 ? ? -134.03 -52.04 9 1 SER A 54 ? ? 60.99 169.63 10 1 ASN A 68 ? ? -166.71 18.39 11 1 GLN A 70 ? ? -66.44 -71.40 12 1 LYS A 71 ? ? -68.02 93.19 13 1 MET A 74 ? ? -164.69 112.83 14 1 SER A 92 ? ? -145.71 -56.80 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #