data_1Q0W # _entry.id 1Q0W # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.351 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1Q0W pdb_00001q0w 10.2210/pdb1q0w/pdb RCSB RCSB019776 ? ? WWPDB D_1000019776 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1Q0V 'Solution structure of tandem UIMs of Vps27' unspecified PDB 1O06 'Crystal structure of the Vps27 carboxy-terminal UIM' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1Q0W _pdbx_database_status.recvd_initial_deposition_date 2003-07-17 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Swanson, K.A.' 1 'Kang, R.S.' 2 'Stamenova, S.D.' 3 'Hicke, L.' 4 'Radhakrishnan, I.' 5 # _citation.id primary _citation.title 'Solution Structure of Vps27 UIM-Ubiquitin Complex Important for Endosomal Sorting and Receptor Downregulation' _citation.journal_abbrev 'Embo J.' _citation.journal_volume 22 _citation.page_first 4597 _citation.page_last 4606 _citation.year 2003 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12970172 _citation.pdbx_database_id_DOI 10.1093/emboj/cdg471 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Swanson, K.A.' 1 ? primary 'Kang, R.S.' 2 ? primary 'Stamenova, S.D.' 3 ? primary 'Hicke, L.' 4 ? primary 'Radhakrishnan, I.' 5 ? # _cell.entry_id 1Q0W _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1Q0W _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Vacuolar protein sorting-associated protein VPS27' 2824.103 1 ? ? 'Amino-terminal UIM, residues 256 to 278' ? 2 polymer man Ubiquitin 8568.769 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no YPEDEEELIRKAIELSLKESRNSA YPEDEEELIRKAIELSLKESRNSA A ? 2 'polypeptide(L)' no no MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 TYR n 1 2 PRO n 1 3 GLU n 1 4 ASP n 1 5 GLU n 1 6 GLU n 1 7 GLU n 1 8 LEU n 1 9 ILE n 1 10 ARG n 1 11 LYS n 1 12 ALA n 1 13 ILE n 1 14 GLU n 1 15 LEU n 1 16 SER n 1 17 LEU n 1 18 LYS n 1 19 GLU n 1 20 SER n 1 21 ARG n 1 22 ASN n 1 23 SER n 1 24 ALA n 2 1 MET n 2 2 GLN n 2 3 ILE n 2 4 PHE n 2 5 VAL n 2 6 LYS n 2 7 THR n 2 8 LEU n 2 9 THR n 2 10 GLY n 2 11 LYS n 2 12 THR n 2 13 ILE n 2 14 THR n 2 15 LEU n 2 16 GLU n 2 17 VAL n 2 18 GLU n 2 19 SER n 2 20 SER n 2 21 ASP n 2 22 THR n 2 23 ILE n 2 24 ASP n 2 25 ASN n 2 26 VAL n 2 27 LYS n 2 28 SER n 2 29 LYS n 2 30 ILE n 2 31 GLN n 2 32 ASP n 2 33 LYS n 2 34 GLU n 2 35 GLY n 2 36 ILE n 2 37 PRO n 2 38 PRO n 2 39 ASP n 2 40 GLN n 2 41 GLN n 2 42 ARG n 2 43 LEU n 2 44 ILE n 2 45 PHE n 2 46 ALA n 2 47 GLY n 2 48 LYS n 2 49 GLN n 2 50 LEU n 2 51 GLU n 2 52 ASP n 2 53 GLY n 2 54 ARG n 2 55 THR n 2 56 LEU n 2 57 SER n 2 58 ASP n 2 59 TYR n 2 60 ASN n 2 61 ILE n 2 62 GLN n 2 63 LYS n 2 64 GLU n 2 65 SER n 2 66 THR n 2 67 LEU n 2 68 HIS n 2 69 LEU n 2 70 VAL n 2 71 LEU n 2 72 ARG n 2 73 LEU n 2 74 ARG n 2 75 GLY n 2 76 GLY n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ;baker's yeast ; _entity_src_gen.gene_src_genus Saccharomyces _entity_src_gen.pdbx_gene_src_gene ;(UBI1 OR RPL40A OR YIL148W) AND (UBI2 OR RPL40B OR YKR094C) AND (UBI3 OR RPS31 OR YLR167W OR L9470.14) AND (UBI4 OR SCD2 OR YLL039C) ; _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4932 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET3-a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details ;The sequence was synthesized using a peptide synthesizer. The sequence contains a non-native tyrosine residue at the amino-terminus (residue number 255). The sequence occurs naturally in S. Cerevisiae. ; # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP VPS27_YEAST P40343 1 TPEDEEELIRKAIELSLKESRNSA 256 ? 2 UNP UBIQ_YEAST P61864 2 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1Q0W A 1 ? 24 ? P40343 256 ? 279 ? 255 278 2 2 1Q0W B 1 ? 76 ? P61864 1 ? 76 ? 1 76 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 1Q0W _struct_ref_seq_dif.mon_id TYR _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P40343 _struct_ref_seq_dif.db_mon_id THR _struct_ref_seq_dif.pdbx_seq_db_seq_num 256 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 255 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 3D_15N-separated_NOESY 2 1 1 '2D double half-filtered NOESY' 3 2 1 3D_13C-separated_NOESY 4 2 1 '2D double half-filtered NOESY' 5 2 1 '3D 13C-filtered,13C-edited NOESY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 6.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength '20 mM sodium phosphate, pH 6.0, 0.2% NaN3' _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system 1 '1 mM U-15N,13C Ubiquitin + 1 mM Vps27 amino-terminal UIM' '90% H2O/10% D2O' 2 '1 mM U-15N,13C Ubiquitin + 1 mM Vps27 amino-terminal UIM' '100% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.model INOVA _pdbx_nmr_spectrometer.field_strength 600 # _pdbx_nmr_refine.entry_id 1Q0W _pdbx_nmr_refine.method 'TORSION ANGLE DYNAMICS AND SIMULATED ANNEALING' _pdbx_nmr_refine.details ;THE STRUCTURES ARE BASED ON A TOTAL OF 2138 DISTANCE RESTRAINTS, INCLUDING 2062 NOE-DERIVED DISTANCE RESTRAINTS [1625 UNAMBIGUOUS AND 437 AMBIGUOUS RESTRAINTS], 76 HYDROGEN BONDING DISTANCE RESTRAINTS, AND 112 TORSION ANGLE RESTRAINTS. ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1Q0W _pdbx_nmr_ensemble.conformers_calculated_total_number 80 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria ;The submitted conformers are the 20 structures with the lowest restraint energies, restraint violations, and RMS deviations from ideal covalent geometry ; _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1Q0W _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal VNMR 6.1B collection 'Varian Instruments' 1 Felix 98.0 'data analysis' Accelrys 2 CNS 1.1 refinement 'Brunger et al.' 3 ARIA 1.2 refinement 'Linge and Nilges' 4 # _exptl.entry_id 1Q0W _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1Q0W _struct.title 'Solution structure of Vps27 amino-terminal UIM-ubiquitin complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1Q0W _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' _struct_keywords.text 'PROTEIN-PROTEIN COMPLEX, TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 4 ? GLU A 19 ? ASP A 258 GLU A 273 1 ? 16 HELX_P HELX_P2 2 THR B 22 ? GLU B 34 ? THR B 22 GLU B 34 5 ? 13 HELX_P HELX_P3 3 LEU B 56 ? TYR B 59 ? LEU B 56 TYR B 59 1 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR B 12 ? GLU B 16 ? THR B 12 GLU B 16 A 2 GLN B 2 ? THR B 7 ? GLN B 2 THR B 7 A 3 THR B 66 ? LEU B 71 ? THR B 66 LEU B 71 A 4 GLN B 41 ? PHE B 45 ? GLN B 41 PHE B 45 A 5 LYS B 48 ? GLN B 49 ? LYS B 48 GLN B 49 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE B 13 ? O ILE B 13 N VAL B 5 ? N VAL B 5 A 2 3 N LYS B 6 ? N LYS B 6 O LEU B 67 ? O LEU B 67 A 3 4 O HIS B 68 ? O HIS B 68 N ILE B 44 ? N ILE B 44 A 4 5 N PHE B 45 ? N PHE B 45 O LYS B 48 ? O LYS B 48 # _database_PDB_matrix.entry_id 1Q0W _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1Q0W _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 TYR 1 255 255 TYR TYR A . n A 1 2 PRO 2 256 256 PRO PRO A . n A 1 3 GLU 3 257 257 GLU GLU A . n A 1 4 ASP 4 258 258 ASP ASP A . n A 1 5 GLU 5 259 259 GLU GLU A . n A 1 6 GLU 6 260 260 GLU GLU A . n A 1 7 GLU 7 261 261 GLU GLU A . n A 1 8 LEU 8 262 262 LEU LEU A . n A 1 9 ILE 9 263 263 ILE ILE A . n A 1 10 ARG 10 264 264 ARG ARG A . n A 1 11 LYS 11 265 265 LYS LYS A . n A 1 12 ALA 12 266 266 ALA ALA A . n A 1 13 ILE 13 267 267 ILE ILE A . n A 1 14 GLU 14 268 268 GLU GLU A . n A 1 15 LEU 15 269 269 LEU LEU A . n A 1 16 SER 16 270 270 SER SER A . n A 1 17 LEU 17 271 271 LEU LEU A . n A 1 18 LYS 18 272 272 LYS LYS A . n A 1 19 GLU 19 273 273 GLU GLU A . n A 1 20 SER 20 274 274 SER SER A . n A 1 21 ARG 21 275 275 ARG ARG A . n A 1 22 ASN 22 276 276 ASN ASN A . n A 1 23 SER 23 277 277 SER SER A . n A 1 24 ALA 24 278 278 ALA ALA A . n B 2 1 MET 1 1 1 MET MET B . n B 2 2 GLN 2 2 2 GLN GLN B . n B 2 3 ILE 3 3 3 ILE ILE B . n B 2 4 PHE 4 4 4 PHE PHE B . n B 2 5 VAL 5 5 5 VAL VAL B . n B 2 6 LYS 6 6 6 LYS LYS B . n B 2 7 THR 7 7 7 THR THR B . n B 2 8 LEU 8 8 8 LEU LEU B . n B 2 9 THR 9 9 9 THR THR B . n B 2 10 GLY 10 10 10 GLY GLY B . n B 2 11 LYS 11 11 11 LYS LYS B . n B 2 12 THR 12 12 12 THR THR B . n B 2 13 ILE 13 13 13 ILE ILE B . n B 2 14 THR 14 14 14 THR THR B . n B 2 15 LEU 15 15 15 LEU LEU B . n B 2 16 GLU 16 16 16 GLU GLU B . n B 2 17 VAL 17 17 17 VAL VAL B . n B 2 18 GLU 18 18 18 GLU GLU B . n B 2 19 SER 19 19 19 SER SER B . n B 2 20 SER 20 20 20 SER SER B . n B 2 21 ASP 21 21 21 ASP ASP B . n B 2 22 THR 22 22 22 THR THR B . n B 2 23 ILE 23 23 23 ILE ILE B . n B 2 24 ASP 24 24 24 ASP ASP B . n B 2 25 ASN 25 25 25 ASN ASN B . n B 2 26 VAL 26 26 26 VAL VAL B . n B 2 27 LYS 27 27 27 LYS LYS B . n B 2 28 SER 28 28 28 SER SER B . n B 2 29 LYS 29 29 29 LYS LYS B . n B 2 30 ILE 30 30 30 ILE ILE B . n B 2 31 GLN 31 31 31 GLN GLN B . n B 2 32 ASP 32 32 32 ASP ASP B . n B 2 33 LYS 33 33 33 LYS LYS B . n B 2 34 GLU 34 34 34 GLU GLU B . n B 2 35 GLY 35 35 35 GLY GLY B . n B 2 36 ILE 36 36 36 ILE ILE B . n B 2 37 PRO 37 37 37 PRO PRO B . n B 2 38 PRO 38 38 38 PRO PRO B . n B 2 39 ASP 39 39 39 ASP ASP B . n B 2 40 GLN 40 40 40 GLN GLN B . n B 2 41 GLN 41 41 41 GLN GLN B . n B 2 42 ARG 42 42 42 ARG ARG B . n B 2 43 LEU 43 43 43 LEU LEU B . n B 2 44 ILE 44 44 44 ILE ILE B . n B 2 45 PHE 45 45 45 PHE PHE B . n B 2 46 ALA 46 46 46 ALA ALA B . n B 2 47 GLY 47 47 47 GLY GLY B . n B 2 48 LYS 48 48 48 LYS LYS B . n B 2 49 GLN 49 49 49 GLN GLN B . n B 2 50 LEU 50 50 50 LEU LEU B . n B 2 51 GLU 51 51 51 GLU GLU B . n B 2 52 ASP 52 52 52 ASP ASP B . n B 2 53 GLY 53 53 53 GLY GLY B . n B 2 54 ARG 54 54 54 ARG ARG B . n B 2 55 THR 55 55 55 THR THR B . n B 2 56 LEU 56 56 56 LEU LEU B . n B 2 57 SER 57 57 57 SER SER B . n B 2 58 ASP 58 58 58 ASP ASP B . n B 2 59 TYR 59 59 59 TYR TYR B . n B 2 60 ASN 60 60 60 ASN ASN B . n B 2 61 ILE 61 61 61 ILE ILE B . n B 2 62 GLN 62 62 62 GLN GLN B . n B 2 63 LYS 63 63 63 LYS LYS B . n B 2 64 GLU 64 64 64 GLU GLU B . n B 2 65 SER 65 65 65 SER SER B . n B 2 66 THR 66 66 66 THR THR B . n B 2 67 LEU 67 67 67 LEU LEU B . n B 2 68 HIS 68 68 68 HIS HIS B . n B 2 69 LEU 69 69 69 LEU LEU B . n B 2 70 VAL 70 70 70 VAL VAL B . n B 2 71 LEU 71 71 71 LEU LEU B . n B 2 72 ARG 72 72 72 ARG ARG B . n B 2 73 LEU 73 73 73 LEU LEU B . n B 2 74 ARG 74 74 74 ARG ARG B . n B 2 75 GLY 75 75 75 GLY GLY B . n B 2 76 GLY 76 76 76 GLY GLY B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-10-07 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-10-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_database_remark.id _pdbx_database_remark.text 650 ;HELIX Author determined secondary structure ; 700 ;SHEET Author determined secondary structure ; # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 2 H B THR 22 ? ? HD21 B ASN 25 ? ? 1.32 2 14 HA A ILE 263 ? ? HG22 B VAL 70 ? ? 1.34 3 16 HA A ILE 263 ? ? HG22 B VAL 70 ? ? 1.33 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 256 ? ? -78.17 47.98 2 1 GLU A 257 ? ? -145.11 52.12 3 1 SER A 274 ? ? -80.25 41.96 4 1 ASN A 276 ? ? -79.97 42.22 5 1 ASP B 52 ? ? -76.76 49.44 6 2 PRO A 256 ? ? -76.94 38.96 7 2 GLU A 257 ? ? 63.61 135.14 8 2 SER A 274 ? ? -81.92 47.48 9 2 ASN A 276 ? ? 56.90 -127.05 10 2 SER A 277 ? ? -69.76 -140.52 11 2 THR B 7 ? ? -74.05 -151.50 12 2 THR B 9 ? ? -153.42 54.85 13 2 ARG B 74 ? ? -173.28 130.83 14 3 ARG A 275 ? ? -75.06 34.04 15 3 ASN A 276 ? ? -82.55 45.55 16 3 LEU B 8 ? ? -75.04 43.62 17 3 THR B 9 ? ? -149.57 33.02 18 3 VAL B 17 ? ? -148.80 -156.74 19 3 ARG B 72 ? ? -76.78 47.34 20 3 LEU B 73 ? ? 64.40 131.91 21 4 THR B 22 ? ? -71.67 -152.98 22 4 GLU B 51 ? ? -67.35 -156.19 23 4 ASP B 52 ? ? -142.28 43.25 24 4 LEU B 73 ? ? 49.52 -135.37 25 5 PRO A 256 ? ? -66.27 -134.70 26 5 SER A 274 ? ? -86.55 39.34 27 5 SER A 277 ? ? -80.58 41.99 28 5 SER B 20 ? ? -86.04 39.31 29 5 ARG B 74 ? ? -176.72 -44.93 30 6 GLU A 257 ? ? 66.47 135.15 31 6 SER A 277 ? ? 57.67 -143.98 32 6 LEU B 8 ? ? 51.87 -103.76 33 6 THR B 9 ? ? -153.46 58.46 34 6 LYS B 33 ? ? -67.12 -70.53 35 6 LEU B 73 ? ? 61.28 133.14 36 7 SER A 277 ? ? 74.00 -43.43 37 7 THR B 9 ? ? -152.30 -46.05 38 7 THR B 22 ? ? -69.11 -173.47 39 7 ASP B 52 ? ? -76.45 49.31 40 8 ARG A 275 ? ? 58.12 -133.15 41 8 SER A 277 ? ? -179.30 44.57 42 8 THR B 22 ? ? -78.70 -158.16 43 8 GLU B 51 ? ? -68.71 -148.47 44 8 ASP B 52 ? ? -151.30 45.34 45 8 ARG B 74 ? ? 66.06 135.57 46 9 GLU A 257 ? ? -144.61 -64.78 47 9 SER A 274 ? ? -84.12 48.03 48 9 ASN A 276 ? ? -175.63 53.87 49 9 SER A 277 ? ? -172.61 -49.58 50 9 SER B 20 ? ? -92.31 39.06 51 9 ASP B 21 ? ? -78.27 -148.81 52 9 GLU B 51 ? ? -68.35 -145.82 53 9 ASP B 52 ? ? -163.36 49.94 54 9 ARG B 74 ? ? 61.18 -127.39 55 10 GLU A 257 ? ? -146.40 45.52 56 10 ARG A 275 ? ? 65.74 -78.85 57 11 SER A 274 ? ? -85.99 39.09 58 11 THR B 22 ? ? -71.75 -152.01 59 11 GLU B 51 ? ? -65.97 -146.64 60 11 ASP B 52 ? ? -156.49 45.03 61 12 ARG A 275 ? ? 74.50 -41.90 62 12 ASN A 276 ? ? -70.06 -137.72 63 12 SER A 277 ? ? -171.03 48.92 64 12 SER B 20 ? ? -82.39 41.44 65 12 LEU B 73 ? ? 60.39 128.61 66 12 ARG B 74 ? ? -173.76 131.17 67 13 ASN A 276 ? ? -156.56 39.30 68 13 SER B 20 ? ? -99.57 34.41 69 13 LYS B 33 ? ? -72.79 -71.71 70 13 GLU B 51 ? ? -65.27 -149.45 71 13 ASP B 52 ? ? -150.99 40.14 72 14 PRO A 256 ? ? -69.47 -141.77 73 14 SER A 277 ? ? -79.97 42.56 74 14 GLN B 2 ? ? -119.36 76.40 75 14 THR B 22 ? ? -71.92 -155.96 76 14 GLN B 62 ? ? -71.37 -144.20 77 14 ARG B 74 ? ? -75.58 -142.49 78 15 SER A 277 ? ? -179.39 136.94 79 15 THR B 9 ? ? -147.60 -48.99 80 15 LEU B 73 ? ? 66.82 132.47 81 16 ASN A 276 ? ? -168.75 -43.30 82 16 SER A 277 ? ? -160.23 49.63 83 16 THR B 7 ? ? -92.96 -158.33 84 16 THR B 9 ? ? -76.38 34.91 85 16 THR B 22 ? ? -72.40 -153.15 86 16 GLU B 51 ? ? -67.12 -160.59 87 16 ARG B 72 ? ? -59.32 107.23 88 16 LEU B 73 ? ? 47.44 -135.00 89 16 ARG B 74 ? ? -175.41 -42.57 90 17 ASN A 276 ? ? -172.92 135.42 91 17 SER A 277 ? ? -161.29 -44.48 92 17 THR B 7 ? ? -89.33 -152.80 93 17 ARG B 74 ? ? 65.43 133.78 94 18 ASN A 276 ? ? 66.04 135.74 95 18 SER A 277 ? ? 63.85 129.62 96 18 THR B 7 ? ? -79.90 -151.44 97 18 THR B 9 ? ? -152.71 -43.11 98 18 ALA B 46 ? ? 63.40 -72.84 99 18 LEU B 50 ? ? -77.31 38.45 100 18 GLU B 51 ? ? 39.13 -144.58 101 18 ASP B 52 ? ? -168.46 36.91 102 18 ARG B 74 ? ? -173.05 -44.34 103 19 ASN A 276 ? ? -172.61 -43.52 104 19 SER A 277 ? ? -162.12 45.52 105 19 THR B 22 ? ? -70.13 -153.50 106 19 LEU B 50 ? ? -76.96 31.40 107 19 GLU B 51 ? ? 43.16 -147.82 108 19 ASP B 52 ? ? -160.33 45.28 109 20 THR B 7 ? ? -88.28 -152.53 110 20 THR B 22 ? ? -74.64 -157.32 111 20 GLU B 51 ? ? -68.17 -155.38 112 20 ASP B 52 ? ? -123.21 -55.47 113 20 LEU B 73 ? ? 53.72 -136.61 #