HEADER VIRAL PROTEIN, HYDROLASE 28-JUL-03 1Q31 TITLE CRYSTAL STRUCTURE OF THE TOBACCO ETCH VIRUS PROTEASE C151A MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEAR INCLUSION PROTEIN A; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: TOBACCO ETCH VIRUS PROTEASE; COMPND 5 EC: 3.4.22.44; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TOBACCO ETCH VIRUS; SOURCE 3 ORGANISM_TAXID: 12227; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: C41(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PRET3ATEV KEYWDS 3C-TYPE PROTEASE, TEV, TWO-DOMAIN, ANTIPARALLEL, BETA-BARREL, KEYWDS 2 TRYPSIN-LIKE, C151A, VIRAL PROTEIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR C.M.NUNN,S.DJORDJEVIC,R.R.GEORGE,G.T.URQUHART,L.H.CHAO,Y.TSUCHIYA REVDAT 6 25-OCT-23 1Q31 1 REMARK REVDAT 5 10-NOV-21 1Q31 1 REMARK SEQADV LINK REVDAT 4 13-JUL-11 1Q31 1 VERSN REVDAT 3 24-FEB-09 1Q31 1 VERSN REVDAT 2 21-JUN-05 1Q31 1 AUTHOR JRNL REVDAT 1 02-NOV-04 1Q31 0 JRNL AUTH C.M.NUNN,M.JEEVES,M.J.CLIFF,G.T.URQUHART,R.R.GEORGE, JRNL AUTH 2 L.H.CHAO,Y.TSCUCHIA,S.DJORDJEVIC JRNL TITL CRYSTAL STRUCTURE OF TOBACCO ETCH VIRUS PROTEASE SHOWS THE JRNL TITL 2 PROTEIN C TERMINUS BOUND WITHIN THE ACTIVE SITE. JRNL REF J.MOL.BIOL. V. 350 145 2005 JRNL REFN ISSN 0022-2836 JRNL PMID 15919091 JRNL DOI 10.1016/J.JMB.2005.04.013 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.58 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 13436 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.240 REMARK 3 FREE R VALUE : 0.302 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1364 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.82 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 59.80 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3900 REMARK 3 BIN FREE R VALUE : 0.4400 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 136 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.038 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3635 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 37 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 74.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -39.08000 REMARK 3 B22 (A**2) : 33.83000 REMARK 3 B33 (A**2) : 5.25000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 7.92000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.41 REMARK 3 ESD FROM SIGMAA (A) : 0.66 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.56 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.73 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.720 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.90 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.010 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1Q31 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-JUL-03. REMARK 100 THE DEPOSITION ID IS D_1000019852. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-SEP-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.933 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13436 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 91.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 88.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1LVB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: LITHIUM SULPHATE MONOHYDRATE, TRIS REMARK 280 HCL, PEG 4000, PH 8.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 73.29350 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 20.77200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 73.29350 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 20.77200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMPLY COMPRISES REMARK 300 2 PROTOMERS OF TEV PROTEASE WHICH REMARK 300 ARE SIMILAR IN CONFORMATION AND REMARK 300 RELATED BY NON-CRYSTALLOGRAPHIC REMARK 300 SYMMETRY. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19400 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 -73.29350 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 20.77200 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 911 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 GLU A 2 REMARK 465 SER A 3 REMARK 465 GLU A 223 REMARK 465 PRO A 224 REMARK 465 PHE A 225 REMARK 465 GLN A 226 REMARK 465 PRO A 227 REMARK 465 VAL A 228 REMARK 465 LYS A 229 REMARK 465 GLU A 230 REMARK 465 ALA A 231 REMARK 465 THR A 232 REMARK 465 GLN A 233 REMARK 465 LEU A 234 REMARK 465 GLY B 1 REMARK 465 GLU B 2 REMARK 465 SER B 3 REMARK 465 GLU B 222 REMARK 465 GLU B 223 REMARK 465 PRO B 224 REMARK 465 PHE B 225 REMARK 465 GLN B 226 REMARK 465 PRO B 227 REMARK 465 VAL B 228 REMARK 465 LYS B 229 REMARK 465 GLU B 230 REMARK 465 ALA B 231 REMARK 465 THR B 232 REMARK 465 GLN B 233 REMARK 465 LEU B 234 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 26 56.05 19.63 REMARK 500 LEU A 32 -164.28 -166.20 REMARK 500 THR A 43 -154.96 -140.23 REMARK 500 LYS A 45 -20.73 -37.64 REMARK 500 PHE A 48 41.33 -102.09 REMARK 500 ASN A 51 64.01 -151.11 REMARK 500 ASN A 52 52.45 -145.49 REMARK 500 THR A 70 -15.88 -49.96 REMARK 500 ASP A 81 47.16 -82.04 REMARK 500 PRO A 88 165.64 -45.60 REMARK 500 ASP A 90 46.86 -103.00 REMARK 500 PRO A 93 176.05 -49.16 REMARK 500 PRO A 95 -166.38 -61.36 REMARK 500 GLN A 96 49.65 -146.81 REMARK 500 ARG A 105 138.98 -39.24 REMARK 500 THR A 118 -168.80 66.89 REMARK 500 LYS A 119 -11.62 96.14 REMARK 500 SER A 120 168.86 164.57 REMARK 500 SER A 122 136.75 -176.05 REMARK 500 MET A 124 112.31 -161.47 REMARK 500 PRO A 133 -155.31 -61.57 REMARK 500 SER A 134 92.63 177.44 REMARK 500 SER A 135 -144.12 77.37 REMARK 500 ILE A 138 -74.06 -64.42 REMARK 500 SER A 168 -60.49 -125.35 REMARK 500 ASN A 174 42.70 76.34 REMARK 500 GLN A 193 56.58 -66.21 REMARK 500 GLU A 194 -44.09 -135.07 REMARK 500 GLN A 197 79.86 -117.28 REMARK 500 ASN A 205 60.12 -110.65 REMARK 500 PRO A 221 -164.80 -62.74 REMARK 500 ASP B 26 55.21 18.18 REMARK 500 LEU B 32 -164.08 -163.46 REMARK 500 THR B 43 -154.09 -136.88 REMARK 500 LYS B 45 -22.92 -38.77 REMARK 500 PHE B 48 40.43 -100.38 REMARK 500 ASN B 51 64.26 -152.61 REMARK 500 ASN B 52 52.10 -146.62 REMARK 500 ASP B 81 45.63 -79.86 REMARK 500 PRO B 88 165.11 -44.31 REMARK 500 ASP B 90 48.23 -101.88 REMARK 500 PRO B 93 176.43 -50.18 REMARK 500 PRO B 95 -166.35 -60.81 REMARK 500 GLN B 96 50.40 -147.87 REMARK 500 PHE B 116 177.69 59.34 REMARK 500 GLN B 117 108.93 85.91 REMARK 500 THR B 118 118.77 49.60 REMARK 500 MET B 121 39.18 -147.05 REMARK 500 MET B 124 111.04 -162.44 REMARK 500 PRO B 133 -155.01 -61.95 REMARK 500 REMARK 500 THIS ENTRY HAS 58 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME B 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME A 902 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1LVB RELATED DB: PDB REMARK 900 C151A MUTANT OF TEV PROTEASE COMPLEXED WITH A SUBSTRATE REMARK 900 RELATED ID: 1LVM RELATED DB: PDB REMARK 900 S219D MUTANT OF TEV PROTEASE COMPLEXED WITH PRODUCT DBREF 1Q31 A 1 242 UNP P04517 POLG_TEV 2038 2279 DBREF 1Q31 B 1 242 UNP P04517 POLG_TEV 2038 2279 SEQADV 1Q31 ALA A 151 UNP P04517 CYS 2188 ENGINEERED MUTATION SEQADV 1Q31 ALA B 151 UNP P04517 CYS 2188 ENGINEERED MUTATION SEQRES 1 A 242 GLY GLU SER LEU PHE LYS GLY PRO ARG ASP TYR ASN PRO SEQRES 2 A 242 ILE SER SER THR ILE CYS HIS LEU THR ASN GLU SER ASP SEQRES 3 A 242 GLY HIS THR THR SER LEU TYR GLY ILE GLY PHE GLY PRO SEQRES 4 A 242 PHE ILE ILE THR ASN LYS HIS LEU PHE ARG ARG ASN ASN SEQRES 5 A 242 GLY THR LEU LEU VAL GLN SER LEU HIS GLY VAL PHE LYS SEQRES 6 A 242 VAL LYS ASN THR THR THR LEU GLN GLN HIS LEU ILE ASP SEQRES 7 A 242 GLY ARG ASP MET ILE ILE ILE ARG MET PRO LYS ASP PHE SEQRES 8 A 242 PRO PRO PHE PRO GLN LYS LEU LYS PHE ARG GLU PRO GLN SEQRES 9 A 242 ARG GLU GLU ARG ILE CYS LEU VAL THR THR ASN PHE GLN SEQRES 10 A 242 THR LYS SER MET SER SER MET VAL SER ASP THR SER CYS SEQRES 11 A 242 THR PHE PRO SER SER ASP GLY ILE PHE TRP LYS HIS TRP SEQRES 12 A 242 ILE GLN THR LYS ASP GLY GLN ALA GLY SER PRO LEU VAL SEQRES 13 A 242 SER THR ARG ASP GLY PHE ILE VAL GLY ILE HIS SER ALA SEQRES 14 A 242 SER ASN PHE THR ASN THR ASN ASN TYR PHE THR SER VAL SEQRES 15 A 242 PRO LYS ASN PHE MET GLU LEU LEU THR ASN GLN GLU ALA SEQRES 16 A 242 GLN GLN TRP VAL SER GLY TRP ARG LEU ASN ALA ASP SER SEQRES 17 A 242 VAL LEU TRP GLY GLY HIS LYS VAL PHE MET SER LYS PRO SEQRES 18 A 242 GLU GLU PRO PHE GLN PRO VAL LYS GLU ALA THR GLN LEU SEQRES 19 A 242 MET ASN GLU LEU VAL TYR SER GLN SEQRES 1 B 242 GLY GLU SER LEU PHE LYS GLY PRO ARG ASP TYR ASN PRO SEQRES 2 B 242 ILE SER SER THR ILE CYS HIS LEU THR ASN GLU SER ASP SEQRES 3 B 242 GLY HIS THR THR SER LEU TYR GLY ILE GLY PHE GLY PRO SEQRES 4 B 242 PHE ILE ILE THR ASN LYS HIS LEU PHE ARG ARG ASN ASN SEQRES 5 B 242 GLY THR LEU LEU VAL GLN SER LEU HIS GLY VAL PHE LYS SEQRES 6 B 242 VAL LYS ASN THR THR THR LEU GLN GLN HIS LEU ILE ASP SEQRES 7 B 242 GLY ARG ASP MET ILE ILE ILE ARG MET PRO LYS ASP PHE SEQRES 8 B 242 PRO PRO PHE PRO GLN LYS LEU LYS PHE ARG GLU PRO GLN SEQRES 9 B 242 ARG GLU GLU ARG ILE CYS LEU VAL THR THR ASN PHE GLN SEQRES 10 B 242 THR LYS SER MET SER SER MET VAL SER ASP THR SER CYS SEQRES 11 B 242 THR PHE PRO SER SER ASP GLY ILE PHE TRP LYS HIS TRP SEQRES 12 B 242 ILE GLN THR LYS ASP GLY GLN ALA GLY SER PRO LEU VAL SEQRES 13 B 242 SER THR ARG ASP GLY PHE ILE VAL GLY ILE HIS SER ALA SEQRES 14 B 242 SER ASN PHE THR ASN THR ASN ASN TYR PHE THR SER VAL SEQRES 15 B 242 PRO LYS ASN PHE MET GLU LEU LEU THR ASN GLN GLU ALA SEQRES 16 B 242 GLN GLN TRP VAL SER GLY TRP ARG LEU ASN ALA ASP SER SEQRES 17 B 242 VAL LEU TRP GLY GLY HIS LYS VAL PHE MET SER LYS PRO SEQRES 18 B 242 GLU GLU PRO PHE GLN PRO VAL LYS GLU ALA THR GLN LEU SEQRES 19 B 242 MET ASN GLU LEU VAL TYR SER GLN HET BME A 902 4 HET BME B 901 4 HETNAM BME BETA-MERCAPTOETHANOL FORMUL 3 BME 2(C2 H6 O S) FORMUL 5 HOH *37(H2 O) HELIX 1 1 TYR A 11 THR A 17 1 7 HELIX 2 2 LYS A 45 ARG A 49 5 5 HELIX 3 3 ASN A 68 THR A 71 5 4 HELIX 4 4 ASN A 185 ASN A 192 1 8 HELIX 5 5 TYR B 11 THR B 17 1 7 HELIX 6 6 HIS B 46 ARG B 49 5 4 HELIX 7 7 ASN B 68 THR B 71 5 4 HELIX 8 8 THR B 118 SER B 122 5 5 HELIX 9 9 ASN B 185 ASN B 192 1 8 SHEET 1 A 8 GLY A 62 VAL A 66 0 SHEET 2 A 8 GLY A 53 SER A 59 -1 O LEU A 55 N VAL A 66 SHEET 3 A 8 ILE A 18 SER A 25 -1 N HIS A 20 O GLN A 58 SHEET 4 A 8 THR A 29 PHE A 37 -1 O THR A 30 N ASN A 23 SHEET 5 A 8 PHE A 40 THR A 43 -1 O PHE A 40 N PHE A 37 SHEET 6 A 8 ILE A 83 ARG A 86 -1 O ILE A 83 N THR A 43 SHEET 7 A 8 GLN A 73 LEU A 76 -1 O GLN A 73 N ARG A 86 SHEET 8 A 8 VAL A 199 SER A 200 -1 O VAL A 199 N GLN A 74 SHEET 1 B13 SER A 122 VAL A 125 0 SHEET 2 B13 ARG A 108 ASN A 115 -1 N THR A 113 O MET A 124 SHEET 3 B13 SER A 129 CYS A 130 -1 N SER A 129 O ILE A 109 SHEET 4 B13 ARG A 108 ASN A 115 -1 N ILE A 109 O SER A 129 SHEET 5 B13 PRO A 154 SER A 157 -1 O PRO A 154 N VAL A 112 SHEET 6 B13 ILE A 163 SER A 170 -1 N VAL A 164 O LEU A 155 SHEET 7 B13 ASN A 177 SER A 181 -1 N TYR A 178 O ALA A 169 SHEET 8 B13 PHE A 139 HIS A 142 -1 O TRP A 140 N PHE A 179 SHEET 9 B13 ASN A 177 SER A 181 -1 O ASN A 177 N HIS A 142 SHEET 10 B13 ILE A 163 SER A 170 -1 N ILE A 166 O THR A 180 SHEET 11 B13 VAL A 239 SER A 241 -1 N TYR A 240 O SER A 170 SHEET 12 B13 HIS A 214 PHE A 217 1 O LYS A 215 N VAL A 239 SHEET 13 B13 SER A 208 TRP A 211 -1 O VAL A 209 N VAL A 216 SHEET 1 C 8 GLY B 62 VAL B 66 0 SHEET 2 C 8 GLY B 53 SER B 59 -1 O LEU B 55 N VAL B 66 SHEET 3 C 8 ILE B 18 SER B 25 -1 O HIS B 20 N GLN B 58 SHEET 4 C 8 THR B 29 PHE B 37 -1 O THR B 30 N ASN B 23 SHEET 5 C 8 PHE B 40 ASN B 44 -1 O PHE B 40 N PHE B 37 SHEET 6 C 8 MET B 82 ARG B 86 -1 O ILE B 83 N THR B 43 SHEET 7 C 8 GLN B 73 LEU B 76 -1 O GLN B 73 N ARG B 86 SHEET 8 C 8 VAL B 199 SER B 200 -1 O VAL B 199 N GLN B 74 SHEET 1 D13 MET B 124 VAL B 125 0 SHEET 2 D13 ARG B 108 THR B 113 -1 N THR B 113 O MET B 124 SHEET 3 D13 SER B 129 CYS B 130 -1 O SER B 129 N ILE B 109 SHEET 4 D13 ARG B 108 THR B 113 -1 N ILE B 109 O SER B 129 SHEET 5 D13 PRO B 154 SER B 157 -1 O PRO B 154 N VAL B 112 SHEET 6 D13 ILE B 163 SER B 170 -1 N VAL B 164 O LEU B 155 SHEET 7 D13 ASN B 177 SER B 181 -1 N TYR B 178 O ALA B 169 SHEET 8 D13 PHE B 139 HIS B 142 -1 O TRP B 140 N PHE B 179 SHEET 9 D13 ASN B 177 SER B 181 -1 O ASN B 177 N HIS B 142 SHEET 10 D13 ILE B 163 SER B 170 -1 N ILE B 166 O THR B 180 SHEET 11 D13 VAL B 239 SER B 241 -1 N TYR B 240 O SER B 170 SHEET 12 D13 HIS B 214 PHE B 217 1 O LYS B 215 N VAL B 239 SHEET 13 D13 SER B 208 TRP B 211 -1 O VAL B 209 N VAL B 216 LINK SG CYS A 130 S2 BME A 902 1555 1555 2.05 LINK SG CYS B 130 S2 BME B 901 1555 1555 2.06 SITE 1 AC1 1 CYS B 130 SITE 1 AC2 2 CYS A 130 TRP A 143 CRYST1 146.587 41.544 96.063 90.00 108.95 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006822 0.000000 0.002342 0.00000 SCALE2 0.000000 0.024071 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011006 0.00000