data_1Q3F
# 
_entry.id   1Q3F 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.376 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   1Q3F         pdb_00001q3f 10.2210/pdb1q3f/pdb 
NDB   PD0461       ?            ?                   
RCSB  RCSB019866   ?            ?                   
WWPDB D_1000019866 ?            ?                   
# 
loop_
_pdbx_database_related.db_name 
_pdbx_database_related.db_id 
_pdbx_database_related.details 
_pdbx_database_related.content_type 
PDB 1EMH 'Crystal Structure Of Human Uracil-DNA Glycosylase Bound To Uncleaved Substrate-Containing DNA' unspecified 
PDB 1SSP 'Wild-Type Uracil-DNA Glycosylase Bound To Uracil-Containing DNA'                               unspecified 
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.entry_id                        1Q3F 
_pdbx_database_status.recvd_initial_deposition_date   2003-07-29 
_pdbx_database_status.deposit_site                    RCSB 
_pdbx_database_status.process_site                    RCSB 
_pdbx_database_status.SG_entry                        . 
_pdbx_database_status.status_code_sf                  ? 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.methods_development_category    ? 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_nmr_data            ? 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'Bianchet, M.A.' 1 
'Seiple, L.A.'   2 
'Jiang, Y.L.'    3 
'Ichikawa, Y.'   4 
'Amzel, L.M.'    5 
'Stivers, J.T.'  6 
# 
_citation.id                        primary 
_citation.title                     
'Electrostatic guidance of glycosyl cation migration along the reaction coordinate of uracil DNA glycosylase.' 
_citation.journal_abbrev            Biochemistry 
_citation.journal_volume            42 
_citation.page_first                12455 
_citation.page_last                 12460 
_citation.year                      2003 
_citation.journal_id_ASTM           BICHAW 
_citation.country                   US 
_citation.journal_id_ISSN           0006-2960 
_citation.journal_id_CSD            0033 
_citation.book_publisher            ? 
_citation.pdbx_database_id_PubMed   14580190 
_citation.pdbx_database_id_DOI      10.1021/bi035372+ 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Bianchet, M.A.' 1 ? 
primary 'Seiple, L.A.'   2 ? 
primary 'Jiang, Y.L.'    3 ? 
primary 'Ichikawa, Y.'   4 ? 
primary 'Amzel, L.M.'    5 ? 
primary 'Stivers, J.T.'  6 ? 
# 
_cell.entry_id           1Q3F 
_cell.length_a           48.640 
_cell.length_b           65.890 
_cell.length_c           99.410 
_cell.angle_alpha        90.00 
_cell.angle_beta         90.00 
_cell.angle_gamma        90.00 
_cell.Z_PDB              4 
_cell.pdbx_unique_axis   ? 
_cell.length_a_esd       ? 
_cell.length_b_esd       ? 
_cell.length_c_esd       ? 
_cell.angle_alpha_esd    ? 
_cell.angle_beta_esd     ? 
_cell.angle_gamma_esd    ? 
# 
_symmetry.entry_id                         1Q3F 
_symmetry.space_group_name_H-M             'P 21 21 21' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                19 
_symmetry.space_group_name_Hall            ? 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer     syn "5'-D(*TP*GP*TP*(NRI)P*AP*TP*CP*TP*T)-3'" 2586.712  1   ?       ? ? 
;1-aza-2'-deoxyribose-containing DNA
;
2 polymer     syn "5'-D(*AP*AP*AP*GP*AP*TP*AP*AP*CP*A)-3'"  3070.071  1   ?       ? ? ?                                     
3 polymer     man 'Uracil-DNA glycosylase'                  25544.137 1   3.2.2.- ? ? ?                                     
4 non-polymer syn URACIL                                    112.087   1   ?       ? ? ?                                     
5 non-polymer syn 'PHOSPHATE ION'                           94.971    1   ?       ? ? ?                                     
6 water       nat water                                     18.015    275 ?       ? ? ?                                     
# 
_entity_name_com.entity_id   3 
_entity_name_com.name        UDG 
# 
_entity_name_sys.entity_id   3 
_entity_name_sys.name        3.2.2.- 
# 
loop_
_entity_poly.entity_id 
_entity_poly.type 
_entity_poly.nstd_linkage 
_entity_poly.nstd_monomer 
_entity_poly.pdbx_seq_one_letter_code 
_entity_poly.pdbx_seq_one_letter_code_can 
_entity_poly.pdbx_strand_id 
_entity_poly.pdbx_target_identifier 
1 polydeoxyribonucleotide no yes '(DT)(DG)(DT)(NRI)(DA)(DT)(DC)(DT)(DT)' TGTXATCTT B ? 
2 polydeoxyribonucleotide no no  '(DA)(DA)(DA)(DG)(DA)(DT)(DA)(DA)(DC)(DA)' AAAGATAACA C ? 
3 'polypeptide(L)'        no no  
;MEFFGESWKKHLSGEFGKPYFIKLMGFVAEERKHYTVYPPPHQVFTWTQMCDIKDVKVVILGQDPYHGPNQAHGLCFSVQ
RPVPPPPSLENIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSWLNQNSNGLV
FLLWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGCRHFSKTNELLQKSGKKPIDWKEL
;
;MEFFGESWKKHLSGEFGKPYFIKLMGFVAEERKHYTVYPPPHQVFTWTQMCDIKDVKVVILGQDPYHGPNQAHGLCFSVQ
RPVPPPPSLENIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSWLNQNSNGLV
FLLWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGCRHFSKTNELLQKSGKKPIDWKEL
;
A ? 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1   DT  n 
1 2   DG  n 
1 3   DT  n 
1 4   NRI n 
1 5   DA  n 
1 6   DT  n 
1 7   DC  n 
1 8   DT  n 
1 9   DT  n 
2 1   DA  n 
2 2   DA  n 
2 3   DA  n 
2 4   DG  n 
2 5   DA  n 
2 6   DT  n 
2 7   DA  n 
2 8   DA  n 
2 9   DC  n 
2 10  DA  n 
3 1   MET n 
3 2   GLU n 
3 3   PHE n 
3 4   PHE n 
3 5   GLY n 
3 6   GLU n 
3 7   SER n 
3 8   TRP n 
3 9   LYS n 
3 10  LYS n 
3 11  HIS n 
3 12  LEU n 
3 13  SER n 
3 14  GLY n 
3 15  GLU n 
3 16  PHE n 
3 17  GLY n 
3 18  LYS n 
3 19  PRO n 
3 20  TYR n 
3 21  PHE n 
3 22  ILE n 
3 23  LYS n 
3 24  LEU n 
3 25  MET n 
3 26  GLY n 
3 27  PHE n 
3 28  VAL n 
3 29  ALA n 
3 30  GLU n 
3 31  GLU n 
3 32  ARG n 
3 33  LYS n 
3 34  HIS n 
3 35  TYR n 
3 36  THR n 
3 37  VAL n 
3 38  TYR n 
3 39  PRO n 
3 40  PRO n 
3 41  PRO n 
3 42  HIS n 
3 43  GLN n 
3 44  VAL n 
3 45  PHE n 
3 46  THR n 
3 47  TRP n 
3 48  THR n 
3 49  GLN n 
3 50  MET n 
3 51  CYS n 
3 52  ASP n 
3 53  ILE n 
3 54  LYS n 
3 55  ASP n 
3 56  VAL n 
3 57  LYS n 
3 58  VAL n 
3 59  VAL n 
3 60  ILE n 
3 61  LEU n 
3 62  GLY n 
3 63  GLN n 
3 64  ASP n 
3 65  PRO n 
3 66  TYR n 
3 67  HIS n 
3 68  GLY n 
3 69  PRO n 
3 70  ASN n 
3 71  GLN n 
3 72  ALA n 
3 73  HIS n 
3 74  GLY n 
3 75  LEU n 
3 76  CYS n 
3 77  PHE n 
3 78  SER n 
3 79  VAL n 
3 80  GLN n 
3 81  ARG n 
3 82  PRO n 
3 83  VAL n 
3 84  PRO n 
3 85  PRO n 
3 86  PRO n 
3 87  PRO n 
3 88  SER n 
3 89  LEU n 
3 90  GLU n 
3 91  ASN n 
3 92  ILE n 
3 93  TYR n 
3 94  LYS n 
3 95  GLU n 
3 96  LEU n 
3 97  SER n 
3 98  THR n 
3 99  ASP n 
3 100 ILE n 
3 101 GLU n 
3 102 ASP n 
3 103 PHE n 
3 104 VAL n 
3 105 HIS n 
3 106 PRO n 
3 107 GLY n 
3 108 HIS n 
3 109 GLY n 
3 110 ASP n 
3 111 LEU n 
3 112 SER n 
3 113 GLY n 
3 114 TRP n 
3 115 ALA n 
3 116 LYS n 
3 117 GLN n 
3 118 GLY n 
3 119 VAL n 
3 120 LEU n 
3 121 LEU n 
3 122 LEU n 
3 123 ASN n 
3 124 ALA n 
3 125 VAL n 
3 126 LEU n 
3 127 THR n 
3 128 VAL n 
3 129 ARG n 
3 130 ALA n 
3 131 HIS n 
3 132 GLN n 
3 133 ALA n 
3 134 ASN n 
3 135 SER n 
3 136 HIS n 
3 137 LYS n 
3 138 GLU n 
3 139 ARG n 
3 140 GLY n 
3 141 TRP n 
3 142 GLU n 
3 143 GLN n 
3 144 PHE n 
3 145 THR n 
3 146 ASP n 
3 147 ALA n 
3 148 VAL n 
3 149 VAL n 
3 150 SER n 
3 151 TRP n 
3 152 LEU n 
3 153 ASN n 
3 154 GLN n 
3 155 ASN n 
3 156 SER n 
3 157 ASN n 
3 158 GLY n 
3 159 LEU n 
3 160 VAL n 
3 161 PHE n 
3 162 LEU n 
3 163 LEU n 
3 164 TRP n 
3 165 GLY n 
3 166 SER n 
3 167 TYR n 
3 168 ALA n 
3 169 GLN n 
3 170 LYS n 
3 171 LYS n 
3 172 GLY n 
3 173 SER n 
3 174 ALA n 
3 175 ILE n 
3 176 ASP n 
3 177 ARG n 
3 178 LYS n 
3 179 ARG n 
3 180 HIS n 
3 181 HIS n 
3 182 VAL n 
3 183 LEU n 
3 184 GLN n 
3 185 THR n 
3 186 ALA n 
3 187 HIS n 
3 188 PRO n 
3 189 SER n 
3 190 PRO n 
3 191 LEU n 
3 192 SER n 
3 193 VAL n 
3 194 TYR n 
3 195 ARG n 
3 196 GLY n 
3 197 PHE n 
3 198 PHE n 
3 199 GLY n 
3 200 CYS n 
3 201 ARG n 
3 202 HIS n 
3 203 PHE n 
3 204 SER n 
3 205 LYS n 
3 206 THR n 
3 207 ASN n 
3 208 GLU n 
3 209 LEU n 
3 210 LEU n 
3 211 GLN n 
3 212 LYS n 
3 213 SER n 
3 214 GLY n 
3 215 LYS n 
3 216 LYS n 
3 217 PRO n 
3 218 ILE n 
3 219 ASP n 
3 220 TRP n 
3 221 LYS n 
3 222 GLU n 
3 223 LEU n 
# 
_entity_src_gen.entity_id                          3 
_entity_src_gen.pdbx_src_id                        1 
_entity_src_gen.pdbx_alt_source_flag               sample 
_entity_src_gen.pdbx_seq_type                      ? 
_entity_src_gen.pdbx_beg_seq_num                   ? 
_entity_src_gen.pdbx_end_seq_num                   ? 
_entity_src_gen.gene_src_common_name               human 
_entity_src_gen.gene_src_genus                     Homo 
_entity_src_gen.pdbx_gene_src_gene                 'UNG OR DGU OR UNG15' 
_entity_src_gen.gene_src_species                   ? 
_entity_src_gen.gene_src_strain                    ? 
_entity_src_gen.gene_src_tissue                    ? 
_entity_src_gen.gene_src_tissue_fraction           ? 
_entity_src_gen.gene_src_details                   ? 
_entity_src_gen.pdbx_gene_src_fragment             ? 
_entity_src_gen.pdbx_gene_src_scientific_name      'Homo sapiens' 
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id     9606 
_entity_src_gen.pdbx_gene_src_variant              ? 
_entity_src_gen.pdbx_gene_src_cell_line            ? 
_entity_src_gen.pdbx_gene_src_atcc                 ? 
_entity_src_gen.pdbx_gene_src_organ                ? 
_entity_src_gen.pdbx_gene_src_organelle            ? 
_entity_src_gen.pdbx_gene_src_cell                 ? 
_entity_src_gen.pdbx_gene_src_cellular_location    ? 
_entity_src_gen.host_org_common_name               ? 
_entity_src_gen.pdbx_host_org_scientific_name      'Escherichia coli' 
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id     562 
_entity_src_gen.host_org_genus                     Escherichia 
_entity_src_gen.pdbx_host_org_gene                 ? 
_entity_src_gen.pdbx_host_org_organ                ? 
_entity_src_gen.host_org_species                   ? 
_entity_src_gen.pdbx_host_org_tissue               ? 
_entity_src_gen.pdbx_host_org_tissue_fraction      ? 
_entity_src_gen.pdbx_host_org_strain               ? 
_entity_src_gen.pdbx_host_org_variant              ? 
_entity_src_gen.pdbx_host_org_cell_line            ? 
_entity_src_gen.pdbx_host_org_atcc                 ? 
_entity_src_gen.pdbx_host_org_culture_collection   ? 
_entity_src_gen.pdbx_host_org_cell                 ? 
_entity_src_gen.pdbx_host_org_organelle            ? 
_entity_src_gen.pdbx_host_org_cellular_location    ? 
_entity_src_gen.pdbx_host_org_vector_type          ? 
_entity_src_gen.pdbx_host_org_vector               ? 
_entity_src_gen.host_org_details                   ? 
_entity_src_gen.expression_system_id               ? 
_entity_src_gen.plasmid_name                       ? 
_entity_src_gen.plasmid_details                    ? 
_entity_src_gen.pdbx_description                   ? 
# 
loop_
_struct_ref.id 
_struct_ref.db_name 
_struct_ref.db_code 
_struct_ref.pdbx_db_accession 
_struct_ref.entity_id 
_struct_ref.pdbx_seq_one_letter_code 
_struct_ref.pdbx_align_begin 
_struct_ref.pdbx_db_isoform 
1 UNP UNG_HUMAN P13051 3 
;FGESWKKHLSGEFGKPYFIKLMGFVAEERKHYTVYPPPHQVFTWTQMCDIKDVKVVILGQDPYHGPNQAHGLCFSVQRPV
PPPPSLENIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSWLNQNSNGLVFLL
WGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGCRHFSKTNELLQKSGKKPIDWKEL
;
85 ? 
2 PDB 1Q3F      1Q3F   1 ? ?  ? 
3 PDB 1Q3F      1Q3F   2 ? ?  ? 
# 
loop_
_struct_ref_seq.align_id 
_struct_ref_seq.ref_id 
_struct_ref_seq.pdbx_PDB_id_code 
_struct_ref_seq.pdbx_strand_id 
_struct_ref_seq.seq_align_beg 
_struct_ref_seq.pdbx_seq_align_beg_ins_code 
_struct_ref_seq.seq_align_end 
_struct_ref_seq.pdbx_seq_align_end_ins_code 
_struct_ref_seq.pdbx_db_accession 
_struct_ref_seq.db_align_beg 
_struct_ref_seq.pdbx_db_align_beg_ins_code 
_struct_ref_seq.db_align_end 
_struct_ref_seq.pdbx_db_align_end_ins_code 
_struct_ref_seq.pdbx_auth_seq_align_beg 
_struct_ref_seq.pdbx_auth_seq_align_end 
1 1 1Q3F A 4 ? 223 ? P13051 85 ? 304 ? 85 304 
2 2 1Q3F B 1 ? 9   ? 1Q3F   2  ? 10  ? 2  10  
3 3 1Q3F C 1 ? 10  ? 1Q3F   21 ? 30  ? 21 30  
# 
loop_
_struct_ref_seq_dif.align_id 
_struct_ref_seq_dif.pdbx_pdb_id_code 
_struct_ref_seq_dif.mon_id 
_struct_ref_seq_dif.pdbx_pdb_strand_id 
_struct_ref_seq_dif.seq_num 
_struct_ref_seq_dif.pdbx_pdb_ins_code 
_struct_ref_seq_dif.pdbx_seq_db_name 
_struct_ref_seq_dif.pdbx_seq_db_accession_code 
_struct_ref_seq_dif.db_mon_id 
_struct_ref_seq_dif.pdbx_seq_db_seq_num 
_struct_ref_seq_dif.details 
_struct_ref_seq_dif.pdbx_auth_seq_num 
_struct_ref_seq_dif.pdbx_ordinal 
1 1Q3F MET A 1 ? UNP P13051 ? ? 'cloning artifact' 82 1 
1 1Q3F GLU A 2 ? UNP P13051 ? ? 'cloning artifact' 83 2 
1 1Q3F PHE A 3 ? UNP P13051 ? ? 'cloning artifact' 84 3 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
ALA 'L-peptide linking' y ALANINE                                                        ? 'C3 H7 N O2'      89.093  
ARG 'L-peptide linking' y ARGININE                                                       ? 'C6 H15 N4 O2 1'  175.209 
ASN 'L-peptide linking' y ASPARAGINE                                                     ? 'C4 H8 N2 O3'     132.118 
ASP 'L-peptide linking' y 'ASPARTIC ACID'                                                ? 'C4 H7 N O4'      133.103 
CYS 'L-peptide linking' y CYSTEINE                                                       ? 'C3 H7 N O2 S'    121.158 
DA  'DNA linking'       y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE"                           ? 'C10 H14 N5 O6 P' 331.222 
DC  'DNA linking'       y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE"                            ? 'C9 H14 N3 O7 P'  307.197 
DG  'DNA linking'       y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE"                           ? 'C10 H14 N5 O7 P' 347.221 
DT  'DNA linking'       y "THYMIDINE-5'-MONOPHOSPHATE"                                   ? 'C10 H15 N2 O8 P' 322.208 
GLN 'L-peptide linking' y GLUTAMINE                                                      ? 'C5 H10 N2 O3'    146.144 
GLU 'L-peptide linking' y 'GLUTAMIC ACID'                                                ? 'C5 H9 N O4'      147.129 
GLY 'peptide linking'   y GLYCINE                                                        ? 'C2 H5 N O2'      75.067  
HIS 'L-peptide linking' y HISTIDINE                                                      ? 'C6 H10 N3 O2 1'  156.162 
HOH non-polymer         . WATER                                                          ? 'H2 O'            18.015  
ILE 'L-peptide linking' y ISOLEUCINE                                                     ? 'C6 H13 N O2'     131.173 
LEU 'L-peptide linking' y LEUCINE                                                        ? 'C6 H13 N O2'     131.173 
LYS 'L-peptide linking' y LYSINE                                                         ? 'C6 H15 N2 O2 1'  147.195 
MET 'L-peptide linking' y METHIONINE                                                     ? 'C5 H11 N O2 S'   149.211 
NRI 'DNA linking'       . 'PHOSPHORIC ACID MONO-(4-HYDROXY-PYRROLIDIN-3-YLMETHYL) ESTER' ? 'C5 H12 N O5 P'   197.126 
PHE 'L-peptide linking' y PHENYLALANINE                                                  ? 'C9 H11 N O2'     165.189 
PO4 non-polymer         . 'PHOSPHATE ION'                                                ? 'O4 P -3'         94.971  
PRO 'L-peptide linking' y PROLINE                                                        ? 'C5 H9 N O2'      115.130 
SER 'L-peptide linking' y SERINE                                                         ? 'C3 H7 N O3'      105.093 
THR 'L-peptide linking' y THREONINE                                                      ? 'C4 H9 N O3'      119.119 
TRP 'L-peptide linking' y TRYPTOPHAN                                                     ? 'C11 H12 N2 O2'   204.225 
TYR 'L-peptide linking' y TYROSINE                                                       ? 'C9 H11 N O3'     181.189 
URA non-polymer         . URACIL                                                         ? 'C4 H4 N2 O2'     112.087 
VAL 'L-peptide linking' y VALINE                                                         ? 'C5 H11 N O2'     117.146 
# 
_exptl.entry_id          1Q3F 
_exptl.method            'X-RAY DIFFRACTION' 
_exptl.crystals_number   1 
# 
_exptl_crystal.id                    1 
_exptl_crystal.density_meas          ? 
_exptl_crystal.density_Matthews      2.54 
_exptl_crystal.density_percent_sol   51.50 
_exptl_crystal.description           ? 
_exptl_crystal.F_000                 ? 
_exptl_crystal.preparation           ? 
# 
_exptl_crystal_grow.crystal_id      1 
_exptl_crystal_grow.method          'VAPOR DIFFUSION, HANGING DROP' 
_exptl_crystal_grow.temp            298 
_exptl_crystal_grow.temp_details    ? 
_exptl_crystal_grow.pH              6.5 
_exptl_crystal_grow.pdbx_details    
'18% PEG 4000, 10% dioxane, 100mM Hepes , pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K' 
_exptl_crystal_grow.pdbx_pH_range   . 
# 
loop_
_exptl_crystal_grow_comp.crystal_id 
_exptl_crystal_grow_comp.id 
_exptl_crystal_grow_comp.sol_id 
_exptl_crystal_grow_comp.name 
_exptl_crystal_grow_comp.volume 
_exptl_crystal_grow_comp.conc 
_exptl_crystal_grow_comp.details 
1 1 1 'PEG 4000' ? ? ? 
1 2 1 dioxane    ? ? ? 
1 3 1 Hepes      ? ? ? 
1 4 1 H2O        ? ? ? 
1 5 2 'PEG 4000' ? ? ? 
1 6 2 dioxane    ? ? ? 
1 7 2 Hepes      ? ? ? 
1 8 2 H2O        ? ? ? 
# 
_diffrn.id                     1 
_diffrn.ambient_temp           298 
_diffrn.ambient_temp_details   ? 
_diffrn.crystal_id             1 
# 
_diffrn_detector.diffrn_id              1 
_diffrn_detector.detector               'IMAGE PLATE' 
_diffrn_detector.type                   'RIGAKU RAXIS IV' 
_diffrn_detector.pdbx_collection_date   2003-01-22 
_diffrn_detector.details                mirrors 
# 
_diffrn_radiation.diffrn_id                        1 
_diffrn_radiation.wavelength_id                    1 
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l   M 
_diffrn_radiation.monochromator                    mirrors 
_diffrn_radiation.pdbx_diffrn_protocol             'SINGLE WAVELENGTH' 
_diffrn_radiation.pdbx_scattering_type             x-ray 
# 
_diffrn_radiation_wavelength.id           1 
_diffrn_radiation_wavelength.wavelength   1.5418 
_diffrn_radiation_wavelength.wt           1.0 
# 
_diffrn_source.diffrn_id                   1 
_diffrn_source.source                      'ROTATING ANODE' 
_diffrn_source.type                        'RIGAKU RU300' 
_diffrn_source.pdbx_synchrotron_site       ? 
_diffrn_source.pdbx_synchrotron_beamline   ? 
_diffrn_source.pdbx_wavelength             ? 
_diffrn_source.pdbx_wavelength_list        1.5418 
# 
_reflns.entry_id                     1Q3F 
_reflns.observed_criterion_sigma_F   0 
_reflns.observed_criterion_sigma_I   0 
_reflns.d_resolution_high            1.9 
_reflns.d_resolution_low             36.51 
_reflns.number_all                   ? 
_reflns.number_obs                   24682 
_reflns.percent_possible_obs         94.9 
_reflns.pdbx_Rmerge_I_obs            ? 
_reflns.pdbx_Rsym_value              0.06 
_reflns.pdbx_netI_over_sigmaI        16.2 
_reflns.B_iso_Wilson_estimate        ? 
_reflns.pdbx_redundancy              4.7 
_reflns.R_free_details               ? 
_reflns.pdbx_chi_squared             ? 
_reflns.pdbx_scaling_rejects         ? 
_reflns.pdbx_ordinal                 1 
_reflns.pdbx_diffrn_id               1 
# 
_reflns_shell.d_res_high             1.9 
_reflns_shell.d_res_low              2.0 
_reflns_shell.percent_possible_all   69.1 
_reflns_shell.Rmerge_I_obs           0.245 
_reflns_shell.pdbx_Rsym_value        0.245 
_reflns_shell.meanI_over_sigI_obs    2.2 
_reflns_shell.pdbx_redundancy        2.1 
_reflns_shell.percent_possible_obs   ? 
_reflns_shell.number_unique_all      ? 
_reflns_shell.number_measured_all    ? 
_reflns_shell.number_measured_obs    ? 
_reflns_shell.number_unique_obs      ? 
_reflns_shell.pdbx_chi_squared       ? 
_reflns_shell.pdbx_ordinal           1 
_reflns_shell.pdbx_diffrn_id         1 
# 
_refine.entry_id                                 1Q3F 
_refine.ls_d_res_high                            1.9 
_refine.ls_d_res_low                             36.52 
_refine.pdbx_ls_sigma_F                          0 
_refine.pdbx_ls_sigma_I                          0 
_refine.ls_number_reflns_all                     ? 
_refine.ls_number_reflns_obs                     24682 
_refine.ls_number_reflns_R_free                  2383 
_refine.ls_percent_reflns_obs                    93.0 
_refine.ls_R_factor_all                          ? 
_refine.ls_R_factor_obs                          0.1903 
_refine.ls_R_factor_R_work                       0.1903 
_refine.ls_R_factor_R_free                       0.2353 
_refine.ls_redundancy_reflns_obs                 ? 
_refine.pdbx_data_cutoff_high_absF               ? 
_refine.pdbx_data_cutoff_low_absF                ? 
_refine.ls_number_parameters                     ? 
_refine.ls_number_restraints                     ? 
_refine.ls_percent_reflns_R_free                 9.2 
_refine.ls_R_factor_R_free_error                 ? 
_refine.ls_R_factor_R_free_error_details         ? 
_refine.pdbx_method_to_determine_struct          'MOLECULAR REPLACEMENT' 
_refine.pdbx_starting_model                      'PDB entry 1AKX' 
_refine.pdbx_ls_cross_valid_method               ? 
_refine.pdbx_R_Free_selection_details            RANDOM 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.pdbx_stereochemistry_target_values       'Engh & Huber' 
_refine.solvent_model_details                    ? 
_refine.solvent_model_param_bsol                 ? 
_refine.solvent_model_param_ksol                 ? 
_refine.occupancy_max                            ? 
_refine.occupancy_min                            ? 
_refine.pdbx_isotropic_thermal_model             ? 
_refine.B_iso_mean                               ? 
_refine.aniso_B[1][1]                            ? 
_refine.aniso_B[1][2]                            ? 
_refine.aniso_B[1][3]                            ? 
_refine.aniso_B[2][2]                            ? 
_refine.aniso_B[2][3]                            ? 
_refine.aniso_B[3][3]                            ? 
_refine.details                                  ? 
_refine.correlation_coeff_Fo_to_Fc               ? 
_refine.correlation_coeff_Fo_to_Fc_free          ? 
_refine.pdbx_solvent_vdw_probe_radii             ? 
_refine.pdbx_solvent_ion_probe_radii             ? 
_refine.pdbx_solvent_shrinkage_radii             ? 
_refine.overall_SU_R_Cruickshank_DPI             ? 
_refine.overall_SU_R_free                        ? 
_refine.overall_SU_B                             ? 
_refine.overall_SU_ML                            ? 
_refine.pdbx_overall_ESU_R                       ? 
_refine.pdbx_overall_ESU_R_Free                  ? 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.pdbx_refine_id                           'X-RAY DIFFRACTION' 
_refine.pdbx_overall_phase_error                 ? 
_refine.ls_wR_factor_R_free                      ? 
_refine.ls_wR_factor_R_work                      ? 
_refine.overall_FOM_free_R_set                   ? 
_refine.overall_FOM_work_R_set                   ? 
_refine.pdbx_diffrn_id                           1 
_refine.pdbx_TLS_residual_ADP_flag               ? 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
# 
_refine_hist.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_hist.cycle_id                         LAST 
_refine_hist.pdbx_number_atoms_protein        1808 
_refine_hist.pdbx_number_atoms_nucleic_acid   375 
_refine_hist.pdbx_number_atoms_ligand         13 
_refine_hist.number_atoms_solvent             275 
_refine_hist.number_atoms_total               2471 
_refine_hist.d_res_high                       1.9 
_refine_hist.d_res_low                        36.52 
# 
loop_
_refine_ls_restr.type 
_refine_ls_restr.dev_ideal 
_refine_ls_restr.dev_ideal_target 
_refine_ls_restr.weight 
_refine_ls_restr.number 
_refine_ls_restr.pdbx_refine_id 
_refine_ls_restr.pdbx_restraint_function 
c_bond_d     0.006608 ?   ? ? 'X-RAY DIFFRACTION' ? 
c_angle_d    1.33519  ?   ? ? 'X-RAY DIFFRACTION' ? 
c_mcbond_it  1.000    1.5 ? ? 'X-RAY DIFFRACTION' ? 
c_mcangle_it 1.544    2.0 ? ? 'X-RAY DIFFRACTION' ? 
c_scbond_it  1.847    2.0 ? ? 'X-RAY DIFFRACTION' ? 
c_scangle_it 2.809    2.5 ? ? 'X-RAY DIFFRACTION' ? 
# 
loop_
_pdbx_xplor_file.serial_no 
_pdbx_xplor_file.param_file 
_pdbx_xplor_file.topol_file 
_pdbx_xplor_file.pdbx_refine_id 
1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 
2 dna-rna_rep.param dna-rna.top 'X-RAY DIFFRACTION' 
3 water_rep.param   water.top   'X-RAY DIFFRACTION' 
4 ion.param         ion.top     'X-RAY DIFFRACTION' 
# 
_struct.entry_id                  1Q3F 
_struct.title                     
;Uracil DNA glycosylase bound to a cationic 1-aza-2'-deoxyribose-containing DNA
;
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        1Q3F 
_struct_keywords.pdbx_keywords   HYDROLASE/DNA 
_struct_keywords.text            'UDG, DNA repair, HYDROLASE-DNA COMPLEX' 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 2 ? 
C N N 3 ? 
D N N 4 ? 
E N N 5 ? 
F N N 6 ? 
G N N 6 ? 
H N N 6 ? 
# 
_struct_biol.id                    1 
_struct_biol.pdbx_parent_biol_id   ? 
_struct_biol.details               ? 
# 
loop_
_struct_conf.conf_type_id 
_struct_conf.id 
_struct_conf.pdbx_PDB_helix_id 
_struct_conf.beg_label_comp_id 
_struct_conf.beg_label_asym_id 
_struct_conf.beg_label_seq_id 
_struct_conf.pdbx_beg_PDB_ins_code 
_struct_conf.end_label_comp_id 
_struct_conf.end_label_asym_id 
_struct_conf.end_label_seq_id 
_struct_conf.pdbx_end_PDB_ins_code 
_struct_conf.beg_auth_comp_id 
_struct_conf.beg_auth_asym_id 
_struct_conf.beg_auth_seq_id 
_struct_conf.end_auth_comp_id 
_struct_conf.end_auth_asym_id 
_struct_conf.end_auth_seq_id 
_struct_conf.pdbx_PDB_helix_class 
_struct_conf.details 
_struct_conf.pdbx_PDB_helix_length 
HELX_P HELX_P1  1  GLY C 5   ? SER C 13  ? GLY A 86  SER A 94  1 ? 9  
HELX_P HELX_P2  2  GLY C 14  ? PHE C 16  ? GLY A 95  PHE A 97  5 ? 3  
HELX_P HELX_P3  3  LYS C 18  ? TYR C 35  ? LYS A 99  TYR A 116 1 ? 18 
HELX_P HELX_P4  4  PRO C 40  ? VAL C 44  ? PRO A 121 VAL A 125 5 ? 5  
HELX_P HELX_P5  5  PHE C 45  ? GLN C 49  ? PHE A 126 GLN A 130 5 ? 5  
HELX_P HELX_P6  6  ASP C 52  ? VAL C 56  ? ASP A 133 VAL A 137 5 ? 5  
HELX_P HELX_P7  7  PRO C 86  ? ILE C 100 ? PRO A 167 ILE A 181 1 ? 15 
HELX_P HELX_P8  8  LEU C 111 ? LYS C 116 ? LEU A 192 LYS A 197 1 ? 6  
HELX_P HELX_P9  9  GLY C 140 ? SER C 156 ? GLY A 221 SER A 237 1 ? 17 
HELX_P HELX_P10 10 TYR C 167 ? ILE C 175 ? TYR A 248 ILE A 256 5 ? 9  
HELX_P HELX_P11 11 SER C 192 ? GLY C 196 ? SER A 273 GLY A 277 5 ? 5  
HELX_P HELX_P12 12 ARG C 201 ? SER C 213 ? ARG A 282 SER A 294 1 ? 13 
# 
_struct_conf_type.id          HELX_P 
_struct_conf_type.criteria    ? 
_struct_conf_type.reference   ? 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
covale1  covale both ? A DT  3 "O3'" ? ? ? 1_555 A NRI 4  P  ? ? B DT  4  B NRI 5  1_555 ? ? ? ? ? ? ?            1.603 ? ? 
covale2  covale both ? A NRI 4 "O3'" ? ? ? 1_555 A DA  5  P  ? ? B NRI 5  B DA  6  1_555 ? ? ? ? ? ? ?            1.613 ? ? 
hydrog1  hydrog ?    ? A DT  1 N3    ? ? ? 1_555 B DA  10 N1 ? ? B DT  2  C DA  30 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog2  hydrog ?    ? A DT  1 O4    ? ? ? 1_555 B DA  10 N6 ? ? B DT  2  C DA  30 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog3  hydrog ?    ? A DG  2 N1    ? ? ? 1_555 B DC  9  N3 ? ? B DG  3  C DC  29 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog4  hydrog ?    ? A DG  2 N2    ? ? ? 1_555 B DC  9  O2 ? ? B DG  3  C DC  29 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog5  hydrog ?    ? A DG  2 O6    ? ? ? 1_555 B DC  9  N4 ? ? B DG  3  C DC  29 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog6  hydrog ?    ? A DT  3 N3    ? ? ? 1_555 B DA  8  N1 ? ? B DT  4  C DA  28 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog7  hydrog ?    ? A DT  3 O4    ? ? ? 1_555 B DA  8  N6 ? ? B DT  4  C DA  28 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog8  hydrog ?    ? A DA  5 N1    ? ? ? 1_555 B DT  6  N3 ? ? B DA  6  C DT  26 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog9  hydrog ?    ? A DA  5 N6    ? ? ? 1_555 B DT  6  O4 ? ? B DA  6  C DT  26 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog10 hydrog ?    ? A DT  6 N3    ? ? ? 1_555 B DA  5  N1 ? ? B DT  7  C DA  25 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog11 hydrog ?    ? A DT  6 O4    ? ? ? 1_555 B DA  5  N6 ? ? B DT  7  C DA  25 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog12 hydrog ?    ? A DC  7 N3    ? ? ? 1_555 B DG  4  N1 ? ? B DC  8  C DG  24 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog13 hydrog ?    ? A DC  7 N4    ? ? ? 1_555 B DG  4  O6 ? ? B DC  8  C DG  24 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog14 hydrog ?    ? A DC  7 O2    ? ? ? 1_555 B DG  4  N2 ? ? B DC  8  C DG  24 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog15 hydrog ?    ? A DT  8 N3    ? ? ? 1_555 B DA  3  N1 ? ? B DT  9  C DA  23 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog16 hydrog ?    ? A DT  8 O4    ? ? ? 1_555 B DA  3  N6 ? ? B DT  9  C DA  23 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog17 hydrog ?    ? A DT  9 N3    ? ? ? 1_555 B DA  2  N1 ? ? B DT  10 C DA  22 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog18 hydrog ?    ? A DT  9 O4    ? ? ? 1_555 B DA  2  N6 ? ? B DT  10 C DA  22 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
# 
loop_
_struct_conn_type.id 
_struct_conn_type.criteria 
_struct_conn_type.reference 
covale ? ? 
hydrog ? ? 
# 
loop_
_struct_mon_prot_cis.pdbx_id 
_struct_mon_prot_cis.label_comp_id 
_struct_mon_prot_cis.label_seq_id 
_struct_mon_prot_cis.label_asym_id 
_struct_mon_prot_cis.label_alt_id 
_struct_mon_prot_cis.pdbx_PDB_ins_code 
_struct_mon_prot_cis.auth_comp_id 
_struct_mon_prot_cis.auth_seq_id 
_struct_mon_prot_cis.auth_asym_id 
_struct_mon_prot_cis.pdbx_label_comp_id_2 
_struct_mon_prot_cis.pdbx_label_seq_id_2 
_struct_mon_prot_cis.pdbx_label_asym_id_2 
_struct_mon_prot_cis.pdbx_PDB_ins_code_2 
_struct_mon_prot_cis.pdbx_auth_comp_id_2 
_struct_mon_prot_cis.pdbx_auth_seq_id_2 
_struct_mon_prot_cis.pdbx_auth_asym_id_2 
_struct_mon_prot_cis.pdbx_PDB_model_num 
_struct_mon_prot_cis.pdbx_omega_angle 
1 TYR 38 C . ? TYR 119 A PRO 39 C ? PRO 120 A 1 -0.31 
2 ARG 81 C . ? ARG 162 A PRO 82 C ? PRO 163 A 1 0.13  
# 
loop_
_struct_sheet.id 
_struct_sheet.type 
_struct_sheet.number_strands 
_struct_sheet.details 
A ? 2 ? 
B ? 4 ? 
# 
loop_
_struct_sheet_order.sheet_id 
_struct_sheet_order.range_id_1 
_struct_sheet_order.range_id_2 
_struct_sheet_order.offset 
_struct_sheet_order.sense 
A 1 2 ? anti-parallel 
B 1 2 ? parallel      
B 2 3 ? parallel      
B 3 4 ? parallel      
# 
loop_
_struct_sheet_range.sheet_id 
_struct_sheet_range.id 
_struct_sheet_range.beg_label_comp_id 
_struct_sheet_range.beg_label_asym_id 
_struct_sheet_range.beg_label_seq_id 
_struct_sheet_range.pdbx_beg_PDB_ins_code 
_struct_sheet_range.end_label_comp_id 
_struct_sheet_range.end_label_asym_id 
_struct_sheet_range.end_label_seq_id 
_struct_sheet_range.pdbx_end_PDB_ins_code 
_struct_sheet_range.beg_auth_comp_id 
_struct_sheet_range.beg_auth_asym_id 
_struct_sheet_range.beg_auth_seq_id 
_struct_sheet_range.end_auth_comp_id 
_struct_sheet_range.end_auth_asym_id 
_struct_sheet_range.end_auth_seq_id 
A 1 VAL C 37  ? TYR C 38  ? VAL A 118 TYR A 119 
A 2 VAL C 128 ? ARG C 129 ? VAL A 209 ARG A 210 
B 1 VAL C 119 ? ASN C 123 ? VAL A 200 ASN A 204 
B 2 VAL C 58  ? GLY C 62  ? VAL A 139 GLY A 143 
B 3 VAL C 160 ? TRP C 164 ? VAL A 241 TRP A 245 
B 4 HIS C 181 ? THR C 185 ? HIS A 262 THR A 266 
# 
loop_
_pdbx_struct_sheet_hbond.sheet_id 
_pdbx_struct_sheet_hbond.range_id_1 
_pdbx_struct_sheet_hbond.range_id_2 
_pdbx_struct_sheet_hbond.range_1_label_atom_id 
_pdbx_struct_sheet_hbond.range_1_label_comp_id 
_pdbx_struct_sheet_hbond.range_1_label_asym_id 
_pdbx_struct_sheet_hbond.range_1_label_seq_id 
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code 
_pdbx_struct_sheet_hbond.range_1_auth_atom_id 
_pdbx_struct_sheet_hbond.range_1_auth_comp_id 
_pdbx_struct_sheet_hbond.range_1_auth_asym_id 
_pdbx_struct_sheet_hbond.range_1_auth_seq_id 
_pdbx_struct_sheet_hbond.range_2_label_atom_id 
_pdbx_struct_sheet_hbond.range_2_label_comp_id 
_pdbx_struct_sheet_hbond.range_2_label_asym_id 
_pdbx_struct_sheet_hbond.range_2_label_seq_id 
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code 
_pdbx_struct_sheet_hbond.range_2_auth_atom_id 
_pdbx_struct_sheet_hbond.range_2_auth_comp_id 
_pdbx_struct_sheet_hbond.range_2_auth_asym_id 
_pdbx_struct_sheet_hbond.range_2_auth_seq_id 
A 1 2 N TYR C 38  ? N TYR A 119 O VAL C 128 ? O VAL A 209 
B 1 2 O LEU C 120 ? O LEU A 201 N ILE C 60  ? N ILE A 141 
B 2 3 N VAL C 59  ? N VAL A 140 O LEU C 162 ? O LEU A 243 
B 3 4 N PHE C 161 ? N PHE A 242 O HIS C 181 ? O HIS A 262 
# 
loop_
_struct_site.id 
_struct_site.pdbx_evidence_code 
_struct_site.pdbx_auth_asym_id 
_struct_site.pdbx_auth_comp_id 
_struct_site.pdbx_auth_seq_id 
_struct_site.pdbx_auth_ins_code 
_struct_site.pdbx_num_residues 
_struct_site.details 
AC1 Software A PO4 3127 ? 4  'BINDING SITE FOR RESIDUE PO4 A 3127' 
AC2 Software B URA 11   ? 10 'BINDING SITE FOR RESIDUE URA B 11'   
# 
loop_
_struct_site_gen.id 
_struct_site_gen.site_id 
_struct_site_gen.pdbx_num_res 
_struct_site_gen.label_comp_id 
_struct_site_gen.label_asym_id 
_struct_site_gen.label_seq_id 
_struct_site_gen.pdbx_auth_ins_code 
_struct_site_gen.auth_comp_id 
_struct_site_gen.auth_asym_id 
_struct_site_gen.auth_seq_id 
_struct_site_gen.label_atom_id 
_struct_site_gen.label_alt_id 
_struct_site_gen.symmetry 
_struct_site_gen.details 
1  AC1 4  ARG C 32  ? ARG A 113  . ? 1_555 ? 
2  AC1 4  THR C 36  ? THR A 117  . ? 1_555 ? 
3  AC1 4  VAL C 37  ? VAL A 118  . ? 1_555 ? 
4  AC1 4  HOH H .   ? HOH A 3191 . ? 1_555 ? 
5  AC2 10 GLY C 62  ? GLY A 143  . ? 1_555 ? 
6  AC2 10 GLN C 63  ? GLN A 144  . ? 1_555 ? 
7  AC2 10 ASP C 64  ? ASP A 145  . ? 1_555 ? 
8  AC2 10 TYR C 66  ? TYR A 147  . ? 1_555 ? 
9  AC2 10 CYS C 76  ? CYS A 157  . ? 1_555 ? 
10 AC2 10 PHE C 77  ? PHE A 158  . ? 1_555 ? 
11 AC2 10 ASN C 123 ? ASN A 204  . ? 1_555 ? 
12 AC2 10 HIS C 187 ? HIS A 268  . ? 1_555 ? 
13 AC2 10 NRI A 4   ? NRI B 5    . ? 1_555 ? 
14 AC2 10 HOH F .   ? HOH B 12   . ? 1_555 ? 
# 
_database_PDB_matrix.entry_id          1Q3F 
_database_PDB_matrix.origx[1][1]       1.000000 
_database_PDB_matrix.origx[1][2]       0.000000 
_database_PDB_matrix.origx[1][3]       0.000000 
_database_PDB_matrix.origx[2][1]       0.000000 
_database_PDB_matrix.origx[2][2]       1.000000 
_database_PDB_matrix.origx[2][3]       0.000000 
_database_PDB_matrix.origx[3][1]       0.000000 
_database_PDB_matrix.origx[3][2]       0.000000 
_database_PDB_matrix.origx[3][3]       1.000000 
_database_PDB_matrix.origx_vector[1]   0.00000 
_database_PDB_matrix.origx_vector[2]   0.00000 
_database_PDB_matrix.origx_vector[3]   0.00000 
# 
_atom_sites.entry_id                    1Q3F 
_atom_sites.fract_transf_matrix[1][1]   0.020559 
_atom_sites.fract_transf_matrix[1][2]   0.000000 
_atom_sites.fract_transf_matrix[1][3]   0.000000 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   0.015177 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   0.010059 
_atom_sites.fract_transf_vector[1]      0.00000 
_atom_sites.fract_transf_vector[2]      0.00000 
_atom_sites.fract_transf_vector[3]      0.00000 
# 
loop_
_atom_type.symbol 
C 
N 
O 
P 
S 
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1   DT  1   2   2   DT  THY B . n 
A 1 2   DG  2   3   3   DG  GUA B . n 
A 1 3   DT  3   4   4   DT  THY B . n 
A 1 4   NRI 4   5   5   NRI UXI B . n 
A 1 5   DA  5   6   6   DA  ADE B . n 
A 1 6   DT  6   7   7   DT  THY B . n 
A 1 7   DC  7   8   8   DC  CYT B . n 
A 1 8   DT  8   9   9   DT  THY B . n 
A 1 9   DT  9   10  10  DT  THY B . n 
B 2 1   DA  1   21  21  DA  ADE C . n 
B 2 2   DA  2   22  22  DA  ADE C . n 
B 2 3   DA  3   23  23  DA  ADE C . n 
B 2 4   DG  4   24  24  DG  GUA C . n 
B 2 5   DA  5   25  25  DA  ADE C . n 
B 2 6   DT  6   26  26  DT  THY C . n 
B 2 7   DA  7   27  27  DA  ADE C . n 
B 2 8   DA  8   28  28  DA  ADE C . n 
B 2 9   DC  9   29  29  DC  CYT C . n 
B 2 10  DA  10  30  30  DA  ADE C . n 
C 3 1   MET 1   82  82  MET MET A . n 
C 3 2   GLU 2   83  83  GLU GLU A . n 
C 3 3   PHE 3   84  84  PHE PHE A . n 
C 3 4   PHE 4   85  85  PHE PHE A . n 
C 3 5   GLY 5   86  86  GLY GLY A . n 
C 3 6   GLU 6   87  87  GLU GLU A . n 
C 3 7   SER 7   88  88  SER SER A . n 
C 3 8   TRP 8   89  89  TRP TRP A . n 
C 3 9   LYS 9   90  90  LYS LYS A . n 
C 3 10  LYS 10  91  91  LYS LYS A . n 
C 3 11  HIS 11  92  92  HIS HIS A . n 
C 3 12  LEU 12  93  93  LEU LEU A . n 
C 3 13  SER 13  94  94  SER SER A . n 
C 3 14  GLY 14  95  95  GLY GLY A . n 
C 3 15  GLU 15  96  96  GLU GLU A . n 
C 3 16  PHE 16  97  97  PHE PHE A . n 
C 3 17  GLY 17  98  98  GLY GLY A . n 
C 3 18  LYS 18  99  99  LYS LYS A . n 
C 3 19  PRO 19  100 100 PRO PRO A . n 
C 3 20  TYR 20  101 101 TYR TYR A . n 
C 3 21  PHE 21  102 102 PHE PHE A . n 
C 3 22  ILE 22  103 103 ILE ILE A . n 
C 3 23  LYS 23  104 104 LYS LYS A . n 
C 3 24  LEU 24  105 105 LEU LEU A . n 
C 3 25  MET 25  106 106 MET MET A . n 
C 3 26  GLY 26  107 107 GLY GLY A . n 
C 3 27  PHE 27  108 108 PHE PHE A . n 
C 3 28  VAL 28  109 109 VAL VAL A . n 
C 3 29  ALA 29  110 110 ALA ALA A . n 
C 3 30  GLU 30  111 111 GLU GLU A . n 
C 3 31  GLU 31  112 112 GLU GLU A . n 
C 3 32  ARG 32  113 113 ARG ARG A . n 
C 3 33  LYS 33  114 114 LYS LYS A . n 
C 3 34  HIS 34  115 115 HIS HIS A . n 
C 3 35  TYR 35  116 116 TYR TYR A . n 
C 3 36  THR 36  117 117 THR THR A . n 
C 3 37  VAL 37  118 118 VAL VAL A . n 
C 3 38  TYR 38  119 119 TYR TYR A . n 
C 3 39  PRO 39  120 120 PRO PRO A . n 
C 3 40  PRO 40  121 121 PRO PRO A . n 
C 3 41  PRO 41  122 122 PRO PRO A . n 
C 3 42  HIS 42  123 123 HIS HIS A . n 
C 3 43  GLN 43  124 124 GLN GLN A . n 
C 3 44  VAL 44  125 125 VAL VAL A . n 
C 3 45  PHE 45  126 126 PHE PHE A . n 
C 3 46  THR 46  127 127 THR THR A . n 
C 3 47  TRP 47  128 128 TRP TRP A . n 
C 3 48  THR 48  129 129 THR THR A . n 
C 3 49  GLN 49  130 130 GLN GLN A . n 
C 3 50  MET 50  131 131 MET MET A . n 
C 3 51  CYS 51  132 132 CYS CYS A . n 
C 3 52  ASP 52  133 133 ASP ASP A . n 
C 3 53  ILE 53  134 134 ILE ILE A . n 
C 3 54  LYS 54  135 135 LYS LYS A . n 
C 3 55  ASP 55  136 136 ASP ASP A . n 
C 3 56  VAL 56  137 137 VAL VAL A . n 
C 3 57  LYS 57  138 138 LYS LYS A . n 
C 3 58  VAL 58  139 139 VAL VAL A . n 
C 3 59  VAL 59  140 140 VAL VAL A . n 
C 3 60  ILE 60  141 141 ILE ILE A . n 
C 3 61  LEU 61  142 142 LEU LEU A . n 
C 3 62  GLY 62  143 143 GLY GLY A . n 
C 3 63  GLN 63  144 144 GLN GLN A . n 
C 3 64  ASP 64  145 145 ASP ASP A . n 
C 3 65  PRO 65  146 146 PRO PRO A . n 
C 3 66  TYR 66  147 147 TYR TYR A . n 
C 3 67  HIS 67  148 148 HIS HIS A . n 
C 3 68  GLY 68  149 149 GLY GLY A . n 
C 3 69  PRO 69  150 150 PRO PRO A . n 
C 3 70  ASN 70  151 151 ASN ASN A . n 
C 3 71  GLN 71  152 152 GLN GLN A . n 
C 3 72  ALA 72  153 153 ALA ALA A . n 
C 3 73  HIS 73  154 154 HIS HIS A . n 
C 3 74  GLY 74  155 155 GLY GLY A . n 
C 3 75  LEU 75  156 156 LEU LEU A . n 
C 3 76  CYS 76  157 157 CYS CYS A . n 
C 3 77  PHE 77  158 158 PHE PHE A . n 
C 3 78  SER 78  159 159 SER SER A . n 
C 3 79  VAL 79  160 160 VAL VAL A . n 
C 3 80  GLN 80  161 161 GLN GLN A . n 
C 3 81  ARG 81  162 162 ARG ARG A . n 
C 3 82  PRO 82  163 163 PRO PRO A . n 
C 3 83  VAL 83  164 164 VAL VAL A . n 
C 3 84  PRO 84  165 165 PRO PRO A . n 
C 3 85  PRO 85  166 166 PRO PRO A . n 
C 3 86  PRO 86  167 167 PRO PRO A . n 
C 3 87  PRO 87  168 168 PRO PRO A . n 
C 3 88  SER 88  169 169 SER SER A . n 
C 3 89  LEU 89  170 170 LEU LEU A . n 
C 3 90  GLU 90  171 171 GLU GLU A . n 
C 3 91  ASN 91  172 172 ASN ASN A . n 
C 3 92  ILE 92  173 173 ILE ILE A . n 
C 3 93  TYR 93  174 174 TYR TYR A . n 
C 3 94  LYS 94  175 175 LYS LYS A . n 
C 3 95  GLU 95  176 176 GLU GLU A . n 
C 3 96  LEU 96  177 177 LEU LEU A . n 
C 3 97  SER 97  178 178 SER SER A . n 
C 3 98  THR 98  179 179 THR THR A . n 
C 3 99  ASP 99  180 180 ASP ASP A . n 
C 3 100 ILE 100 181 181 ILE ILE A . n 
C 3 101 GLU 101 182 182 GLU GLU A . n 
C 3 102 ASP 102 183 183 ASP ASP A . n 
C 3 103 PHE 103 184 184 PHE PHE A . n 
C 3 104 VAL 104 185 185 VAL VAL A . n 
C 3 105 HIS 105 186 186 HIS HIS A . n 
C 3 106 PRO 106 187 187 PRO PRO A . n 
C 3 107 GLY 107 188 188 GLY GLY A . n 
C 3 108 HIS 108 189 189 HIS HIS A . n 
C 3 109 GLY 109 190 190 GLY GLY A . n 
C 3 110 ASP 110 191 191 ASP ASP A . n 
C 3 111 LEU 111 192 192 LEU LEU A . n 
C 3 112 SER 112 193 193 SER SER A . n 
C 3 113 GLY 113 194 194 GLY GLY A . n 
C 3 114 TRP 114 195 195 TRP TRP A . n 
C 3 115 ALA 115 196 196 ALA ALA A . n 
C 3 116 LYS 116 197 197 LYS LYS A . n 
C 3 117 GLN 117 198 198 GLN GLN A . n 
C 3 118 GLY 118 199 199 GLY GLY A . n 
C 3 119 VAL 119 200 200 VAL VAL A . n 
C 3 120 LEU 120 201 201 LEU LEU A . n 
C 3 121 LEU 121 202 202 LEU LEU A . n 
C 3 122 LEU 122 203 203 LEU LEU A . n 
C 3 123 ASN 123 204 204 ASN ASN A . n 
C 3 124 ALA 124 205 205 ALA ALA A . n 
C 3 125 VAL 125 206 206 VAL VAL A . n 
C 3 126 LEU 126 207 207 LEU LEU A . n 
C 3 127 THR 127 208 208 THR THR A . n 
C 3 128 VAL 128 209 209 VAL VAL A . n 
C 3 129 ARG 129 210 210 ARG ARG A . n 
C 3 130 ALA 130 211 211 ALA ALA A . n 
C 3 131 HIS 131 212 212 HIS HIS A . n 
C 3 132 GLN 132 213 213 GLN GLN A . n 
C 3 133 ALA 133 214 214 ALA ALA A . n 
C 3 134 ASN 134 215 215 ASN ASN A . n 
C 3 135 SER 135 216 216 SER SER A . n 
C 3 136 HIS 136 217 217 HIS HIS A . n 
C 3 137 LYS 137 218 218 LYS LYS A . n 
C 3 138 GLU 138 219 219 GLU GLU A . n 
C 3 139 ARG 139 220 220 ARG ARG A . n 
C 3 140 GLY 140 221 221 GLY GLY A . n 
C 3 141 TRP 141 222 222 TRP TRP A . n 
C 3 142 GLU 142 223 223 GLU GLU A . n 
C 3 143 GLN 143 224 224 GLN GLN A . n 
C 3 144 PHE 144 225 225 PHE PHE A . n 
C 3 145 THR 145 226 226 THR THR A . n 
C 3 146 ASP 146 227 227 ASP ASP A . n 
C 3 147 ALA 147 228 228 ALA ALA A . n 
C 3 148 VAL 148 229 229 VAL VAL A . n 
C 3 149 VAL 149 230 230 VAL VAL A . n 
C 3 150 SER 150 231 231 SER SER A . n 
C 3 151 TRP 151 232 232 TRP TRP A . n 
C 3 152 LEU 152 233 233 LEU LEU A . n 
C 3 153 ASN 153 234 234 ASN ASN A . n 
C 3 154 GLN 154 235 235 GLN GLN A . n 
C 3 155 ASN 155 236 236 ASN ASN A . n 
C 3 156 SER 156 237 237 SER SER A . n 
C 3 157 ASN 157 238 238 ASN ASN A . n 
C 3 158 GLY 158 239 239 GLY GLY A . n 
C 3 159 LEU 159 240 240 LEU LEU A . n 
C 3 160 VAL 160 241 241 VAL VAL A . n 
C 3 161 PHE 161 242 242 PHE PHE A . n 
C 3 162 LEU 162 243 243 LEU LEU A . n 
C 3 163 LEU 163 244 244 LEU LEU A . n 
C 3 164 TRP 164 245 245 TRP TRP A . n 
C 3 165 GLY 165 246 246 GLY GLY A . n 
C 3 166 SER 166 247 247 SER SER A . n 
C 3 167 TYR 167 248 248 TYR TYR A . n 
C 3 168 ALA 168 249 249 ALA ALA A . n 
C 3 169 GLN 169 250 250 GLN GLN A . n 
C 3 170 LYS 170 251 251 LYS LYS A . n 
C 3 171 LYS 171 252 252 LYS LYS A . n 
C 3 172 GLY 172 253 253 GLY GLY A . n 
C 3 173 SER 173 254 254 SER SER A . n 
C 3 174 ALA 174 255 255 ALA ALA A . n 
C 3 175 ILE 175 256 256 ILE ILE A . n 
C 3 176 ASP 176 257 257 ASP ASP A . n 
C 3 177 ARG 177 258 258 ARG ARG A . n 
C 3 178 LYS 178 259 259 LYS LYS A . n 
C 3 179 ARG 179 260 260 ARG ARG A . n 
C 3 180 HIS 180 261 261 HIS HIS A . n 
C 3 181 HIS 181 262 262 HIS HIS A . n 
C 3 182 VAL 182 263 263 VAL VAL A . n 
C 3 183 LEU 183 264 264 LEU LEU A . n 
C 3 184 GLN 184 265 265 GLN GLN A . n 
C 3 185 THR 185 266 266 THR THR A . n 
C 3 186 ALA 186 267 267 ALA ALA A . n 
C 3 187 HIS 187 268 268 HIS HIS A . n 
C 3 188 PRO 188 269 269 PRO PRO A . n 
C 3 189 SER 189 270 270 SER SER A . n 
C 3 190 PRO 190 271 271 PRO PRO A . n 
C 3 191 LEU 191 272 272 LEU LEU A . n 
C 3 192 SER 192 273 273 SER SER A . n 
C 3 193 VAL 193 274 274 VAL VAL A . n 
C 3 194 TYR 194 275 275 TYR TYR A . n 
C 3 195 ARG 195 276 276 ARG ARG A . n 
C 3 196 GLY 196 277 277 GLY GLY A . n 
C 3 197 PHE 197 278 278 PHE PHE A . n 
C 3 198 PHE 198 279 279 PHE PHE A . n 
C 3 199 GLY 199 280 280 GLY GLY A . n 
C 3 200 CYS 200 281 281 CYS CYS A . n 
C 3 201 ARG 201 282 282 ARG ARG A . n 
C 3 202 HIS 202 283 283 HIS HIS A . n 
C 3 203 PHE 203 284 284 PHE PHE A . n 
C 3 204 SER 204 285 285 SER SER A . n 
C 3 205 LYS 205 286 286 LYS LYS A . n 
C 3 206 THR 206 287 287 THR THR A . n 
C 3 207 ASN 207 288 288 ASN ASN A . n 
C 3 208 GLU 208 289 289 GLU GLU A . n 
C 3 209 LEU 209 290 290 LEU LEU A . n 
C 3 210 LEU 210 291 291 LEU LEU A . n 
C 3 211 GLN 211 292 292 GLN GLN A . n 
C 3 212 LYS 212 293 293 LYS LYS A . n 
C 3 213 SER 213 294 294 SER SER A . n 
C 3 214 GLY 214 295 295 GLY GLY A . n 
C 3 215 LYS 215 296 296 LYS LYS A . n 
C 3 216 LYS 216 297 297 LYS LYS A . n 
C 3 217 PRO 217 298 298 PRO PRO A . n 
C 3 218 ILE 218 299 299 ILE ILE A . n 
C 3 219 ASP 219 300 300 ASP ASP A . n 
C 3 220 TRP 220 301 301 TRP TRP A . n 
C 3 221 LYS 221 302 302 LYS LYS A . n 
C 3 222 GLU 222 303 303 GLU GLU A . n 
C 3 223 LEU 223 304 304 LEU LEU A . n 
# 
loop_
_pdbx_nonpoly_scheme.asym_id 
_pdbx_nonpoly_scheme.entity_id 
_pdbx_nonpoly_scheme.mon_id 
_pdbx_nonpoly_scheme.ndb_seq_num 
_pdbx_nonpoly_scheme.pdb_seq_num 
_pdbx_nonpoly_scheme.auth_seq_num 
_pdbx_nonpoly_scheme.pdb_mon_id 
_pdbx_nonpoly_scheme.auth_mon_id 
_pdbx_nonpoly_scheme.pdb_strand_id 
_pdbx_nonpoly_scheme.pdb_ins_code 
D 4 URA 1   11   5    URA UXI B . 
E 5 PO4 1   3127 3127 PO4 PO4 A . 
F 6 HOH 1   12   3    HOH HOH B . 
F 6 HOH 2   13   6    HOH HOH B . 
F 6 HOH 3   14   7    HOH HOH B . 
F 6 HOH 4   15   11   HOH HOH B . 
F 6 HOH 5   16   26   HOH HOH B . 
F 6 HOH 6   17   32   HOH HOH B . 
F 6 HOH 7   18   45   HOH HOH B . 
F 6 HOH 8   19   61   HOH HOH B . 
F 6 HOH 9   20   87   HOH HOH B . 
F 6 HOH 10  21   116  HOH HOH B . 
F 6 HOH 11  22   145  HOH HOH B . 
F 6 HOH 12  23   151  HOH HOH B . 
F 6 HOH 13  24   195  HOH HOH B . 
F 6 HOH 14  25   199  HOH HOH B . 
F 6 HOH 15  26   219  HOH HOH B . 
F 6 HOH 16  27   231  HOH HOH B . 
F 6 HOH 17  28   260  HOH HOH B . 
F 6 HOH 18  29   264  HOH HOH B . 
F 6 HOH 19  30   270  HOH HOH B . 
F 6 HOH 20  31   286  HOH HOH B . 
F 6 HOH 21  32   315  HOH HOH B . 
G 6 HOH 1   40   40   HOH HOH C . 
G 6 HOH 2   86   86   HOH HOH C . 
G 6 HOH 3   121  121  HOH HOH C . 
G 6 HOH 4   130  130  HOH HOH C . 
G 6 HOH 5   137  137  HOH HOH C . 
G 6 HOH 6   149  149  HOH HOH C . 
G 6 HOH 7   189  189  HOH HOH C . 
G 6 HOH 8   225  225  HOH HOH C . 
G 6 HOH 9   234  234  HOH HOH C . 
G 6 HOH 10  247  247  HOH HOH C . 
G 6 HOH 11  263  263  HOH HOH C . 
G 6 HOH 12  321  321  HOH HOH C . 
G 6 HOH 13  346  346  HOH HOH C . 
H 6 HOH 1   3128 1    HOH HOH A . 
H 6 HOH 2   3129 2    HOH HOH A . 
H 6 HOH 3   3130 4    HOH HOH A . 
H 6 HOH 4   3131 5    HOH HOH A . 
H 6 HOH 5   3132 8    HOH HOH A . 
H 6 HOH 6   3133 9    HOH HOH A . 
H 6 HOH 7   3134 10   HOH HOH A . 
H 6 HOH 8   3135 12   HOH HOH A . 
H 6 HOH 9   3136 13   HOH HOH A . 
H 6 HOH 10  3137 14   HOH HOH A . 
H 6 HOH 11  3138 15   HOH HOH A . 
H 6 HOH 12  3139 16   HOH HOH A . 
H 6 HOH 13  3140 17   HOH HOH A . 
H 6 HOH 14  3141 18   HOH HOH A . 
H 6 HOH 15  3142 19   HOH HOH A . 
H 6 HOH 16  3143 20   HOH HOH A . 
H 6 HOH 17  3144 21   HOH HOH A . 
H 6 HOH 18  3145 22   HOH HOH A . 
H 6 HOH 19  3146 23   HOH HOH A . 
H 6 HOH 20  3147 24   HOH HOH A . 
H 6 HOH 21  3148 25   HOH HOH A . 
H 6 HOH 22  3149 27   HOH HOH A . 
H 6 HOH 23  3150 28   HOH HOH A . 
H 6 HOH 24  3151 29   HOH HOH A . 
H 6 HOH 25  3152 30   HOH HOH A . 
H 6 HOH 26  3153 31   HOH HOH A . 
H 6 HOH 27  3154 33   HOH HOH A . 
H 6 HOH 28  3155 34   HOH HOH A . 
H 6 HOH 29  3156 35   HOH HOH A . 
H 6 HOH 30  3157 36   HOH HOH A . 
H 6 HOH 31  3158 37   HOH HOH A . 
H 6 HOH 32  3159 38   HOH HOH A . 
H 6 HOH 33  3160 39   HOH HOH A . 
H 6 HOH 34  3161 41   HOH HOH A . 
H 6 HOH 35  3162 42   HOH HOH A . 
H 6 HOH 36  3163 43   HOH HOH A . 
H 6 HOH 37  3164 44   HOH HOH A . 
H 6 HOH 38  3165 46   HOH HOH A . 
H 6 HOH 39  3166 47   HOH HOH A . 
H 6 HOH 40  3167 48   HOH HOH A . 
H 6 HOH 41  3168 49   HOH HOH A . 
H 6 HOH 42  3169 50   HOH HOH A . 
H 6 HOH 43  3170 51   HOH HOH A . 
H 6 HOH 44  3171 52   HOH HOH A . 
H 6 HOH 45  3172 53   HOH HOH A . 
H 6 HOH 46  3173 54   HOH HOH A . 
H 6 HOH 47  3174 55   HOH HOH A . 
H 6 HOH 48  3175 56   HOH HOH A . 
H 6 HOH 49  3176 57   HOH HOH A . 
H 6 HOH 50  3177 58   HOH HOH A . 
H 6 HOH 51  3178 59   HOH HOH A . 
H 6 HOH 52  3179 60   HOH HOH A . 
H 6 HOH 53  3180 62   HOH HOH A . 
H 6 HOH 54  3181 63   HOH HOH A . 
H 6 HOH 55  3182 64   HOH HOH A . 
H 6 HOH 56  3183 65   HOH HOH A . 
H 6 HOH 57  3184 66   HOH HOH A . 
H 6 HOH 58  3185 67   HOH HOH A . 
H 6 HOH 59  3186 68   HOH HOH A . 
H 6 HOH 60  3187 69   HOH HOH A . 
H 6 HOH 61  3188 70   HOH HOH A . 
H 6 HOH 62  3189 71   HOH HOH A . 
H 6 HOH 63  3190 72   HOH HOH A . 
H 6 HOH 64  3191 73   HOH HOH A . 
H 6 HOH 65  3192 74   HOH HOH A . 
H 6 HOH 66  3193 75   HOH HOH A . 
H 6 HOH 67  3194 76   HOH HOH A . 
H 6 HOH 68  3195 77   HOH HOH A . 
H 6 HOH 69  3196 78   HOH HOH A . 
H 6 HOH 70  3197 79   HOH HOH A . 
H 6 HOH 71  3198 80   HOH HOH A . 
H 6 HOH 72  3199 81   HOH HOH A . 
H 6 HOH 73  3200 82   HOH HOH A . 
H 6 HOH 74  3201 83   HOH HOH A . 
H 6 HOH 75  3202 84   HOH HOH A . 
H 6 HOH 76  3203 85   HOH HOH A . 
H 6 HOH 77  3204 88   HOH HOH A . 
H 6 HOH 78  3205 89   HOH HOH A . 
H 6 HOH 79  3206 90   HOH HOH A . 
H 6 HOH 80  3207 91   HOH HOH A . 
H 6 HOH 81  3208 92   HOH HOH A . 
H 6 HOH 82  3209 93   HOH HOH A . 
H 6 HOH 83  3210 94   HOH HOH A . 
H 6 HOH 84  3211 95   HOH HOH A . 
H 6 HOH 85  3212 96   HOH HOH A . 
H 6 HOH 86  3213 97   HOH HOH A . 
H 6 HOH 87  3214 98   HOH HOH A . 
H 6 HOH 88  3215 99   HOH HOH A . 
H 6 HOH 89  3216 100  HOH HOH A . 
H 6 HOH 90  3217 101  HOH HOH A . 
H 6 HOH 91  3218 102  HOH HOH A . 
H 6 HOH 92  3219 103  HOH HOH A . 
H 6 HOH 93  3220 104  HOH HOH A . 
H 6 HOH 94  3221 105  HOH HOH A . 
H 6 HOH 95  3222 106  HOH HOH A . 
H 6 HOH 96  3223 107  HOH HOH A . 
H 6 HOH 97  3224 108  HOH HOH A . 
H 6 HOH 98  3225 109  HOH HOH A . 
H 6 HOH 99  3226 110  HOH HOH A . 
H 6 HOH 100 3227 111  HOH HOH A . 
H 6 HOH 101 3228 112  HOH HOH A . 
H 6 HOH 102 3229 113  HOH HOH A . 
H 6 HOH 103 3230 114  HOH HOH A . 
H 6 HOH 104 3231 115  HOH HOH A . 
H 6 HOH 105 3232 117  HOH HOH A . 
H 6 HOH 106 3233 118  HOH HOH A . 
H 6 HOH 107 3234 119  HOH HOH A . 
H 6 HOH 108 3235 120  HOH HOH A . 
H 6 HOH 109 3236 122  HOH HOH A . 
H 6 HOH 110 3237 123  HOH HOH A . 
H 6 HOH 111 3238 124  HOH HOH A . 
H 6 HOH 112 3239 125  HOH HOH A . 
H 6 HOH 113 3240 126  HOH HOH A . 
H 6 HOH 114 3241 127  HOH HOH A . 
H 6 HOH 115 3242 128  HOH HOH A . 
H 6 HOH 116 3243 129  HOH HOH A . 
H 6 HOH 117 3244 131  HOH HOH A . 
H 6 HOH 118 3245 133  HOH HOH A . 
H 6 HOH 119 3246 134  HOH HOH A . 
H 6 HOH 120 3247 135  HOH HOH A . 
H 6 HOH 121 3248 136  HOH HOH A . 
H 6 HOH 122 3249 140  HOH HOH A . 
H 6 HOH 123 3250 141  HOH HOH A . 
H 6 HOH 124 3251 142  HOH HOH A . 
H 6 HOH 125 3252 143  HOH HOH A . 
H 6 HOH 126 3253 144  HOH HOH A . 
H 6 HOH 127 3254 146  HOH HOH A . 
H 6 HOH 128 3255 147  HOH HOH A . 
H 6 HOH 129 3256 148  HOH HOH A . 
H 6 HOH 130 3257 150  HOH HOH A . 
H 6 HOH 131 3258 152  HOH HOH A . 
H 6 HOH 132 3259 153  HOH HOH A . 
H 6 HOH 133 3260 154  HOH HOH A . 
H 6 HOH 134 3261 155  HOH HOH A . 
H 6 HOH 135 3262 156  HOH HOH A . 
H 6 HOH 136 3263 157  HOH HOH A . 
H 6 HOH 137 3264 158  HOH HOH A . 
H 6 HOH 138 3265 159  HOH HOH A . 
H 6 HOH 139 3266 160  HOH HOH A . 
H 6 HOH 140 3267 162  HOH HOH A . 
H 6 HOH 141 3268 163  HOH HOH A . 
H 6 HOH 142 3269 164  HOH HOH A . 
H 6 HOH 143 3270 167  HOH HOH A . 
H 6 HOH 144 3271 168  HOH HOH A . 
H 6 HOH 145 3272 171  HOH HOH A . 
H 6 HOH 146 3273 172  HOH HOH A . 
H 6 HOH 147 3274 173  HOH HOH A . 
H 6 HOH 148 3275 175  HOH HOH A . 
H 6 HOH 149 3276 176  HOH HOH A . 
H 6 HOH 150 3277 177  HOH HOH A . 
H 6 HOH 151 3278 178  HOH HOH A . 
H 6 HOH 152 3279 179  HOH HOH A . 
H 6 HOH 153 3280 180  HOH HOH A . 
H 6 HOH 154 3281 181  HOH HOH A . 
H 6 HOH 155 3282 182  HOH HOH A . 
H 6 HOH 156 3283 183  HOH HOH A . 
H 6 HOH 157 3284 184  HOH HOH A . 
H 6 HOH 158 3285 185  HOH HOH A . 
H 6 HOH 159 3286 186  HOH HOH A . 
H 6 HOH 160 3287 187  HOH HOH A . 
H 6 HOH 161 3288 188  HOH HOH A . 
H 6 HOH 162 3289 190  HOH HOH A . 
H 6 HOH 163 3290 191  HOH HOH A . 
H 6 HOH 164 3291 192  HOH HOH A . 
H 6 HOH 165 3292 193  HOH HOH A . 
H 6 HOH 166 3293 194  HOH HOH A . 
H 6 HOH 167 3294 196  HOH HOH A . 
H 6 HOH 168 3295 197  HOH HOH A . 
H 6 HOH 169 3296 198  HOH HOH A . 
H 6 HOH 170 3297 200  HOH HOH A . 
H 6 HOH 171 3298 201  HOH HOH A . 
H 6 HOH 172 3299 202  HOH HOH A . 
H 6 HOH 173 3300 203  HOH HOH A . 
H 6 HOH 174 3301 204  HOH HOH A . 
H 6 HOH 175 3302 205  HOH HOH A . 
H 6 HOH 176 3303 206  HOH HOH A . 
H 6 HOH 177 3304 207  HOH HOH A . 
H 6 HOH 178 3305 208  HOH HOH A . 
H 6 HOH 179 3306 209  HOH HOH A . 
H 6 HOH 180 3307 210  HOH HOH A . 
H 6 HOH 181 3308 211  HOH HOH A . 
H 6 HOH 182 3309 212  HOH HOH A . 
H 6 HOH 183 3310 213  HOH HOH A . 
H 6 HOH 184 3311 214  HOH HOH A . 
H 6 HOH 185 3312 215  HOH HOH A . 
H 6 HOH 186 3313 216  HOH HOH A . 
H 6 HOH 187 3314 217  HOH HOH A . 
H 6 HOH 188 3315 218  HOH HOH A . 
H 6 HOH 189 3316 220  HOH HOH A . 
H 6 HOH 190 3317 221  HOH HOH A . 
H 6 HOH 191 3318 222  HOH HOH A . 
H 6 HOH 192 3319 226  HOH HOH A . 
H 6 HOH 193 3320 229  HOH HOH A . 
H 6 HOH 194 3321 232  HOH HOH A . 
H 6 HOH 195 3322 235  HOH HOH A . 
H 6 HOH 196 3323 236  HOH HOH A . 
H 6 HOH 197 3324 238  HOH HOH A . 
H 6 HOH 198 3325 239  HOH HOH A . 
H 6 HOH 199 3326 240  HOH HOH A . 
H 6 HOH 200 3327 244  HOH HOH A . 
H 6 HOH 201 3328 246  HOH HOH A . 
H 6 HOH 202 3329 248  HOH HOH A . 
H 6 HOH 203 3330 252  HOH HOH A . 
H 6 HOH 204 3331 253  HOH HOH A . 
H 6 HOH 205 3332 254  HOH HOH A . 
H 6 HOH 206 3333 258  HOH HOH A . 
H 6 HOH 207 3334 259  HOH HOH A . 
H 6 HOH 208 3335 265  HOH HOH A . 
H 6 HOH 209 3336 266  HOH HOH A . 
H 6 HOH 210 3337 268  HOH HOH A . 
H 6 HOH 211 3338 274  HOH HOH A . 
H 6 HOH 212 3339 275  HOH HOH A . 
H 6 HOH 213 3340 277  HOH HOH A . 
H 6 HOH 214 3341 279  HOH HOH A . 
H 6 HOH 215 3342 280  HOH HOH A . 
H 6 HOH 216 3343 281  HOH HOH A . 
H 6 HOH 217 3344 282  HOH HOH A . 
H 6 HOH 218 3345 288  HOH HOH A . 
H 6 HOH 219 3346 296  HOH HOH A . 
H 6 HOH 220 3347 300  HOH HOH A . 
H 6 HOH 221 3348 308  HOH HOH A . 
H 6 HOH 222 3349 309  HOH HOH A . 
H 6 HOH 223 3350 310  HOH HOH A . 
H 6 HOH 224 3351 311  HOH HOH A . 
H 6 HOH 225 3352 313  HOH HOH A . 
H 6 HOH 226 3353 314  HOH HOH A . 
H 6 HOH 227 3354 316  HOH HOH A . 
H 6 HOH 228 3355 317  HOH HOH A . 
H 6 HOH 229 3356 318  HOH HOH A . 
H 6 HOH 230 3357 319  HOH HOH A . 
H 6 HOH 231 3358 320  HOH HOH A . 
H 6 HOH 232 3359 322  HOH HOH A . 
H 6 HOH 233 3360 326  HOH HOH A . 
H 6 HOH 234 3361 328  HOH HOH A . 
H 6 HOH 235 3362 330  HOH HOH A . 
H 6 HOH 236 3363 332  HOH HOH A . 
H 6 HOH 237 3364 341  HOH HOH A . 
H 6 HOH 238 3365 342  HOH HOH A . 
H 6 HOH 239 3366 353  HOH HOH A . 
H 6 HOH 240 3367 359  HOH HOH A . 
H 6 HOH 241 3368 361  HOH HOH A . 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_defined_assembly 
_pdbx_struct_assembly.method_details       ? 
_pdbx_struct_assembly.oligomeric_details   trimeric 
_pdbx_struct_assembly.oligomeric_count     3 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1 
_pdbx_struct_assembly_gen.asym_id_list      A,B,C,D,E,F,G,H 
# 
_pdbx_struct_oper_list.id                   1 
_pdbx_struct_oper_list.type                 'identity operation' 
_pdbx_struct_oper_list.name                 1_555 
_pdbx_struct_oper_list.symmetry_operation   x,y,z 
_pdbx_struct_oper_list.matrix[1][1]         1.0000000000 
_pdbx_struct_oper_list.matrix[1][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[1][3]         0.0000000000 
_pdbx_struct_oper_list.vector[1]            0.0000000000 
_pdbx_struct_oper_list.matrix[2][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[2][2]         1.0000000000 
_pdbx_struct_oper_list.matrix[2][3]         0.0000000000 
_pdbx_struct_oper_list.vector[2]            0.0000000000 
_pdbx_struct_oper_list.matrix[3][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][3]         1.0000000000 
_pdbx_struct_oper_list.vector[3]            0.0000000000 
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 2004-03-23 
2 'Structure model' 1 1 2008-04-29 
3 'Structure model' 1 2 2011-07-13 
4 'Structure model' 1 3 2015-10-07 
5 'Structure model' 1 4 2023-08-16 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Version format compliance' 
2 3 'Structure model' 'Version format compliance' 
3 4 'Structure model' 'Structure summary'         
4 5 'Structure model' 'Data collection'           
5 5 'Structure model' 'Database references'       
6 5 'Structure model' 'Derived calculations'      
7 5 'Structure model' 'Refinement description'    
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 5 'Structure model' chem_comp_atom                
2 5 'Structure model' chem_comp_bond                
3 5 'Structure model' database_2                    
4 5 'Structure model' pdbx_initial_refinement_model 
5 5 'Structure model' struct_conn                   
6 5 'Structure model' struct_ref_seq_dif            
7 5 'Structure model' struct_site                   
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1  5 'Structure model' '_database_2.pdbx_DOI'                
2  5 'Structure model' '_database_2.pdbx_database_accession' 
3  5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 
4  5 'Structure model' '_struct_conn.ptnr1_auth_comp_id'     
5  5 'Structure model' '_struct_conn.ptnr1_auth_seq_id'      
6  5 'Structure model' '_struct_conn.ptnr1_label_atom_id'    
7  5 'Structure model' '_struct_conn.ptnr1_label_comp_id'    
8  5 'Structure model' '_struct_conn.ptnr1_label_seq_id'     
9  5 'Structure model' '_struct_conn.ptnr2_auth_comp_id'     
10 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id'      
11 5 'Structure model' '_struct_conn.ptnr2_label_atom_id'    
12 5 'Structure model' '_struct_conn.ptnr2_label_comp_id'    
13 5 'Structure model' '_struct_conn.ptnr2_label_seq_id'     
14 5 'Structure model' '_struct_ref_seq_dif.details'         
15 5 'Structure model' '_struct_site.pdbx_auth_asym_id'      
16 5 'Structure model' '_struct_site.pdbx_auth_comp_id'      
17 5 'Structure model' '_struct_site.pdbx_auth_seq_id'       
# 
loop_
_software.name 
_software.classification 
_software.version 
_software.citation_id 
_software.pdbx_ordinal 
DENZO     'data reduction' . ? 1 
SCALEPACK 'data scaling'   . ? 2 
MOLREP    phasing          . ? 3 
CNS       refinement       . ? 4 
# 
_pdbx_database_remark.id     600 
_pdbx_database_remark.text   
;HETEROGEN
The NRI and URA is a transition state analog.  This transition state analog has an uracil and a modified deoxyribose that are not covalently connected to each other.
;
# 
loop_
_pdbx_validate_torsion.id 
_pdbx_validate_torsion.PDB_model_num 
_pdbx_validate_torsion.auth_comp_id 
_pdbx_validate_torsion.auth_asym_id 
_pdbx_validate_torsion.auth_seq_id 
_pdbx_validate_torsion.PDB_ins_code 
_pdbx_validate_torsion.label_alt_id 
_pdbx_validate_torsion.phi 
_pdbx_validate_torsion.psi 
1 1 GLN A 152 ? ? -92.13  -72.80 
2 1 HIS A 154 ? ? -140.83 20.41  
3 1 PHE A 158 ? ? 67.99   -3.38  
4 1 SER A 273 ? ? -147.80 -8.60  
# 
_pdbx_validate_planes.id              1 
_pdbx_validate_planes.PDB_model_num   1 
_pdbx_validate_planes.auth_comp_id    DA 
_pdbx_validate_planes.auth_asym_id    C 
_pdbx_validate_planes.auth_seq_id     28 
_pdbx_validate_planes.PDB_ins_code    ? 
_pdbx_validate_planes.label_alt_id    ? 
_pdbx_validate_planes.rmsd            0.080 
_pdbx_validate_planes.type            'SIDE CHAIN' 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
ALA N      N N N 1   
ALA CA     C N S 2   
ALA C      C N N 3   
ALA O      O N N 4   
ALA CB     C N N 5   
ALA OXT    O N N 6   
ALA H      H N N 7   
ALA H2     H N N 8   
ALA HA     H N N 9   
ALA HB1    H N N 10  
ALA HB2    H N N 11  
ALA HB3    H N N 12  
ALA HXT    H N N 13  
ARG N      N N N 14  
ARG CA     C N S 15  
ARG C      C N N 16  
ARG O      O N N 17  
ARG CB     C N N 18  
ARG CG     C N N 19  
ARG CD     C N N 20  
ARG NE     N N N 21  
ARG CZ     C N N 22  
ARG NH1    N N N 23  
ARG NH2    N N N 24  
ARG OXT    O N N 25  
ARG H      H N N 26  
ARG H2     H N N 27  
ARG HA     H N N 28  
ARG HB2    H N N 29  
ARG HB3    H N N 30  
ARG HG2    H N N 31  
ARG HG3    H N N 32  
ARG HD2    H N N 33  
ARG HD3    H N N 34  
ARG HE     H N N 35  
ARG HH11   H N N 36  
ARG HH12   H N N 37  
ARG HH21   H N N 38  
ARG HH22   H N N 39  
ARG HXT    H N N 40  
ASN N      N N N 41  
ASN CA     C N S 42  
ASN C      C N N 43  
ASN O      O N N 44  
ASN CB     C N N 45  
ASN CG     C N N 46  
ASN OD1    O N N 47  
ASN ND2    N N N 48  
ASN OXT    O N N 49  
ASN H      H N N 50  
ASN H2     H N N 51  
ASN HA     H N N 52  
ASN HB2    H N N 53  
ASN HB3    H N N 54  
ASN HD21   H N N 55  
ASN HD22   H N N 56  
ASN HXT    H N N 57  
ASP N      N N N 58  
ASP CA     C N S 59  
ASP C      C N N 60  
ASP O      O N N 61  
ASP CB     C N N 62  
ASP CG     C N N 63  
ASP OD1    O N N 64  
ASP OD2    O N N 65  
ASP OXT    O N N 66  
ASP H      H N N 67  
ASP H2     H N N 68  
ASP HA     H N N 69  
ASP HB2    H N N 70  
ASP HB3    H N N 71  
ASP HD2    H N N 72  
ASP HXT    H N N 73  
CYS N      N N N 74  
CYS CA     C N R 75  
CYS C      C N N 76  
CYS O      O N N 77  
CYS CB     C N N 78  
CYS SG     S N N 79  
CYS OXT    O N N 80  
CYS H      H N N 81  
CYS H2     H N N 82  
CYS HA     H N N 83  
CYS HB2    H N N 84  
CYS HB3    H N N 85  
CYS HG     H N N 86  
CYS HXT    H N N 87  
DA  OP3    O N N 88  
DA  P      P N N 89  
DA  OP1    O N N 90  
DA  OP2    O N N 91  
DA  "O5'"  O N N 92  
DA  "C5'"  C N N 93  
DA  "C4'"  C N R 94  
DA  "O4'"  O N N 95  
DA  "C3'"  C N S 96  
DA  "O3'"  O N N 97  
DA  "C2'"  C N N 98  
DA  "C1'"  C N R 99  
DA  N9     N Y N 100 
DA  C8     C Y N 101 
DA  N7     N Y N 102 
DA  C5     C Y N 103 
DA  C6     C Y N 104 
DA  N6     N N N 105 
DA  N1     N Y N 106 
DA  C2     C Y N 107 
DA  N3     N Y N 108 
DA  C4     C Y N 109 
DA  HOP3   H N N 110 
DA  HOP2   H N N 111 
DA  "H5'"  H N N 112 
DA  "H5''" H N N 113 
DA  "H4'"  H N N 114 
DA  "H3'"  H N N 115 
DA  "HO3'" H N N 116 
DA  "H2'"  H N N 117 
DA  "H2''" H N N 118 
DA  "H1'"  H N N 119 
DA  H8     H N N 120 
DA  H61    H N N 121 
DA  H62    H N N 122 
DA  H2     H N N 123 
DC  OP3    O N N 124 
DC  P      P N N 125 
DC  OP1    O N N 126 
DC  OP2    O N N 127 
DC  "O5'"  O N N 128 
DC  "C5'"  C N N 129 
DC  "C4'"  C N R 130 
DC  "O4'"  O N N 131 
DC  "C3'"  C N S 132 
DC  "O3'"  O N N 133 
DC  "C2'"  C N N 134 
DC  "C1'"  C N R 135 
DC  N1     N N N 136 
DC  C2     C N N 137 
DC  O2     O N N 138 
DC  N3     N N N 139 
DC  C4     C N N 140 
DC  N4     N N N 141 
DC  C5     C N N 142 
DC  C6     C N N 143 
DC  HOP3   H N N 144 
DC  HOP2   H N N 145 
DC  "H5'"  H N N 146 
DC  "H5''" H N N 147 
DC  "H4'"  H N N 148 
DC  "H3'"  H N N 149 
DC  "HO3'" H N N 150 
DC  "H2'"  H N N 151 
DC  "H2''" H N N 152 
DC  "H1'"  H N N 153 
DC  H41    H N N 154 
DC  H42    H N N 155 
DC  H5     H N N 156 
DC  H6     H N N 157 
DG  OP3    O N N 158 
DG  P      P N N 159 
DG  OP1    O N N 160 
DG  OP2    O N N 161 
DG  "O5'"  O N N 162 
DG  "C5'"  C N N 163 
DG  "C4'"  C N R 164 
DG  "O4'"  O N N 165 
DG  "C3'"  C N S 166 
DG  "O3'"  O N N 167 
DG  "C2'"  C N N 168 
DG  "C1'"  C N R 169 
DG  N9     N Y N 170 
DG  C8     C Y N 171 
DG  N7     N Y N 172 
DG  C5     C Y N 173 
DG  C6     C N N 174 
DG  O6     O N N 175 
DG  N1     N N N 176 
DG  C2     C N N 177 
DG  N2     N N N 178 
DG  N3     N N N 179 
DG  C4     C Y N 180 
DG  HOP3   H N N 181 
DG  HOP2   H N N 182 
DG  "H5'"  H N N 183 
DG  "H5''" H N N 184 
DG  "H4'"  H N N 185 
DG  "H3'"  H N N 186 
DG  "HO3'" H N N 187 
DG  "H2'"  H N N 188 
DG  "H2''" H N N 189 
DG  "H1'"  H N N 190 
DG  H8     H N N 191 
DG  H1     H N N 192 
DG  H21    H N N 193 
DG  H22    H N N 194 
DT  OP3    O N N 195 
DT  P      P N N 196 
DT  OP1    O N N 197 
DT  OP2    O N N 198 
DT  "O5'"  O N N 199 
DT  "C5'"  C N N 200 
DT  "C4'"  C N R 201 
DT  "O4'"  O N N 202 
DT  "C3'"  C N S 203 
DT  "O3'"  O N N 204 
DT  "C2'"  C N N 205 
DT  "C1'"  C N R 206 
DT  N1     N N N 207 
DT  C2     C N N 208 
DT  O2     O N N 209 
DT  N3     N N N 210 
DT  C4     C N N 211 
DT  O4     O N N 212 
DT  C5     C N N 213 
DT  C7     C N N 214 
DT  C6     C N N 215 
DT  HOP3   H N N 216 
DT  HOP2   H N N 217 
DT  "H5'"  H N N 218 
DT  "H5''" H N N 219 
DT  "H4'"  H N N 220 
DT  "H3'"  H N N 221 
DT  "HO3'" H N N 222 
DT  "H2'"  H N N 223 
DT  "H2''" H N N 224 
DT  "H1'"  H N N 225 
DT  H3     H N N 226 
DT  H71    H N N 227 
DT  H72    H N N 228 
DT  H73    H N N 229 
DT  H6     H N N 230 
GLN N      N N N 231 
GLN CA     C N S 232 
GLN C      C N N 233 
GLN O      O N N 234 
GLN CB     C N N 235 
GLN CG     C N N 236 
GLN CD     C N N 237 
GLN OE1    O N N 238 
GLN NE2    N N N 239 
GLN OXT    O N N 240 
GLN H      H N N 241 
GLN H2     H N N 242 
GLN HA     H N N 243 
GLN HB2    H N N 244 
GLN HB3    H N N 245 
GLN HG2    H N N 246 
GLN HG3    H N N 247 
GLN HE21   H N N 248 
GLN HE22   H N N 249 
GLN HXT    H N N 250 
GLU N      N N N 251 
GLU CA     C N S 252 
GLU C      C N N 253 
GLU O      O N N 254 
GLU CB     C N N 255 
GLU CG     C N N 256 
GLU CD     C N N 257 
GLU OE1    O N N 258 
GLU OE2    O N N 259 
GLU OXT    O N N 260 
GLU H      H N N 261 
GLU H2     H N N 262 
GLU HA     H N N 263 
GLU HB2    H N N 264 
GLU HB3    H N N 265 
GLU HG2    H N N 266 
GLU HG3    H N N 267 
GLU HE2    H N N 268 
GLU HXT    H N N 269 
GLY N      N N N 270 
GLY CA     C N N 271 
GLY C      C N N 272 
GLY O      O N N 273 
GLY OXT    O N N 274 
GLY H      H N N 275 
GLY H2     H N N 276 
GLY HA2    H N N 277 
GLY HA3    H N N 278 
GLY HXT    H N N 279 
HIS N      N N N 280 
HIS CA     C N S 281 
HIS C      C N N 282 
HIS O      O N N 283 
HIS CB     C N N 284 
HIS CG     C Y N 285 
HIS ND1    N Y N 286 
HIS CD2    C Y N 287 
HIS CE1    C Y N 288 
HIS NE2    N Y N 289 
HIS OXT    O N N 290 
HIS H      H N N 291 
HIS H2     H N N 292 
HIS HA     H N N 293 
HIS HB2    H N N 294 
HIS HB3    H N N 295 
HIS HD1    H N N 296 
HIS HD2    H N N 297 
HIS HE1    H N N 298 
HIS HE2    H N N 299 
HIS HXT    H N N 300 
HOH O      O N N 301 
HOH H1     H N N 302 
HOH H2     H N N 303 
ILE N      N N N 304 
ILE CA     C N S 305 
ILE C      C N N 306 
ILE O      O N N 307 
ILE CB     C N S 308 
ILE CG1    C N N 309 
ILE CG2    C N N 310 
ILE CD1    C N N 311 
ILE OXT    O N N 312 
ILE H      H N N 313 
ILE H2     H N N 314 
ILE HA     H N N 315 
ILE HB     H N N 316 
ILE HG12   H N N 317 
ILE HG13   H N N 318 
ILE HG21   H N N 319 
ILE HG22   H N N 320 
ILE HG23   H N N 321 
ILE HD11   H N N 322 
ILE HD12   H N N 323 
ILE HD13   H N N 324 
ILE HXT    H N N 325 
LEU N      N N N 326 
LEU CA     C N S 327 
LEU C      C N N 328 
LEU O      O N N 329 
LEU CB     C N N 330 
LEU CG     C N N 331 
LEU CD1    C N N 332 
LEU CD2    C N N 333 
LEU OXT    O N N 334 
LEU H      H N N 335 
LEU H2     H N N 336 
LEU HA     H N N 337 
LEU HB2    H N N 338 
LEU HB3    H N N 339 
LEU HG     H N N 340 
LEU HD11   H N N 341 
LEU HD12   H N N 342 
LEU HD13   H N N 343 
LEU HD21   H N N 344 
LEU HD22   H N N 345 
LEU HD23   H N N 346 
LEU HXT    H N N 347 
LYS N      N N N 348 
LYS CA     C N S 349 
LYS C      C N N 350 
LYS O      O N N 351 
LYS CB     C N N 352 
LYS CG     C N N 353 
LYS CD     C N N 354 
LYS CE     C N N 355 
LYS NZ     N N N 356 
LYS OXT    O N N 357 
LYS H      H N N 358 
LYS H2     H N N 359 
LYS HA     H N N 360 
LYS HB2    H N N 361 
LYS HB3    H N N 362 
LYS HG2    H N N 363 
LYS HG3    H N N 364 
LYS HD2    H N N 365 
LYS HD3    H N N 366 
LYS HE2    H N N 367 
LYS HE3    H N N 368 
LYS HZ1    H N N 369 
LYS HZ2    H N N 370 
LYS HZ3    H N N 371 
LYS HXT    H N N 372 
MET N      N N N 373 
MET CA     C N S 374 
MET C      C N N 375 
MET O      O N N 376 
MET CB     C N N 377 
MET CG     C N N 378 
MET SD     S N N 379 
MET CE     C N N 380 
MET OXT    O N N 381 
MET H      H N N 382 
MET H2     H N N 383 
MET HA     H N N 384 
MET HB2    H N N 385 
MET HB3    H N N 386 
MET HG2    H N N 387 
MET HG3    H N N 388 
MET HE1    H N N 389 
MET HE2    H N N 390 
MET HE3    H N N 391 
MET HXT    H N N 392 
NRI P      P N N 393 
NRI O1P    O N N 394 
NRI O2P    O N N 395 
NRI O3P    O N N 396 
NRI "O5'"  O N N 397 
NRI "C2'"  C N N 398 
NRI "C5'"  C N N 399 
NRI "C4'"  C N R 400 
NRI "C3'"  C N R 401 
NRI "C6'"  C N N 402 
NRI "N1'"  N N N 403 
NRI "O3'"  O N N 404 
NRI HOP2   H N N 405 
NRI HOP3   H N N 406 
NRI "H2'"  H N N 407 
NRI "H2''" H N N 408 
NRI "H5'"  H N N 409 
NRI "H5''" H N N 410 
NRI "H4'"  H N N 411 
NRI "H3'"  H N N 412 
NRI "H6'"  H N N 413 
NRI "H6''" H N N 414 
NRI "HN1'" H N N 415 
NRI "HO3'" H N N 416 
PHE N      N N N 417 
PHE CA     C N S 418 
PHE C      C N N 419 
PHE O      O N N 420 
PHE CB     C N N 421 
PHE CG     C Y N 422 
PHE CD1    C Y N 423 
PHE CD2    C Y N 424 
PHE CE1    C Y N 425 
PHE CE2    C Y N 426 
PHE CZ     C Y N 427 
PHE OXT    O N N 428 
PHE H      H N N 429 
PHE H2     H N N 430 
PHE HA     H N N 431 
PHE HB2    H N N 432 
PHE HB3    H N N 433 
PHE HD1    H N N 434 
PHE HD2    H N N 435 
PHE HE1    H N N 436 
PHE HE2    H N N 437 
PHE HZ     H N N 438 
PHE HXT    H N N 439 
PO4 P      P N N 440 
PO4 O1     O N N 441 
PO4 O2     O N N 442 
PO4 O3     O N N 443 
PO4 O4     O N N 444 
PRO N      N N N 445 
PRO CA     C N S 446 
PRO C      C N N 447 
PRO O      O N N 448 
PRO CB     C N N 449 
PRO CG     C N N 450 
PRO CD     C N N 451 
PRO OXT    O N N 452 
PRO H      H N N 453 
PRO HA     H N N 454 
PRO HB2    H N N 455 
PRO HB3    H N N 456 
PRO HG2    H N N 457 
PRO HG3    H N N 458 
PRO HD2    H N N 459 
PRO HD3    H N N 460 
PRO HXT    H N N 461 
SER N      N N N 462 
SER CA     C N S 463 
SER C      C N N 464 
SER O      O N N 465 
SER CB     C N N 466 
SER OG     O N N 467 
SER OXT    O N N 468 
SER H      H N N 469 
SER H2     H N N 470 
SER HA     H N N 471 
SER HB2    H N N 472 
SER HB3    H N N 473 
SER HG     H N N 474 
SER HXT    H N N 475 
THR N      N N N 476 
THR CA     C N S 477 
THR C      C N N 478 
THR O      O N N 479 
THR CB     C N R 480 
THR OG1    O N N 481 
THR CG2    C N N 482 
THR OXT    O N N 483 
THR H      H N N 484 
THR H2     H N N 485 
THR HA     H N N 486 
THR HB     H N N 487 
THR HG1    H N N 488 
THR HG21   H N N 489 
THR HG22   H N N 490 
THR HG23   H N N 491 
THR HXT    H N N 492 
TRP N      N N N 493 
TRP CA     C N S 494 
TRP C      C N N 495 
TRP O      O N N 496 
TRP CB     C N N 497 
TRP CG     C Y N 498 
TRP CD1    C Y N 499 
TRP CD2    C Y N 500 
TRP NE1    N Y N 501 
TRP CE2    C Y N 502 
TRP CE3    C Y N 503 
TRP CZ2    C Y N 504 
TRP CZ3    C Y N 505 
TRP CH2    C Y N 506 
TRP OXT    O N N 507 
TRP H      H N N 508 
TRP H2     H N N 509 
TRP HA     H N N 510 
TRP HB2    H N N 511 
TRP HB3    H N N 512 
TRP HD1    H N N 513 
TRP HE1    H N N 514 
TRP HE3    H N N 515 
TRP HZ2    H N N 516 
TRP HZ3    H N N 517 
TRP HH2    H N N 518 
TRP HXT    H N N 519 
TYR N      N N N 520 
TYR CA     C N S 521 
TYR C      C N N 522 
TYR O      O N N 523 
TYR CB     C N N 524 
TYR CG     C Y N 525 
TYR CD1    C Y N 526 
TYR CD2    C Y N 527 
TYR CE1    C Y N 528 
TYR CE2    C Y N 529 
TYR CZ     C Y N 530 
TYR OH     O N N 531 
TYR OXT    O N N 532 
TYR H      H N N 533 
TYR H2     H N N 534 
TYR HA     H N N 535 
TYR HB2    H N N 536 
TYR HB3    H N N 537 
TYR HD1    H N N 538 
TYR HD2    H N N 539 
TYR HE1    H N N 540 
TYR HE2    H N N 541 
TYR HH     H N N 542 
TYR HXT    H N N 543 
URA N1     N N N 544 
URA C2     C N N 545 
URA O2     O N N 546 
URA N3     N N N 547 
URA C4     C N N 548 
URA O4     O N N 549 
URA C5     C N N 550 
URA C6     C N N 551 
URA HN1    H N N 552 
URA HN3    H N N 553 
URA H5     H N N 554 
URA H6     H N N 555 
VAL N      N N N 556 
VAL CA     C N S 557 
VAL C      C N N 558 
VAL O      O N N 559 
VAL CB     C N N 560 
VAL CG1    C N N 561 
VAL CG2    C N N 562 
VAL OXT    O N N 563 
VAL H      H N N 564 
VAL H2     H N N 565 
VAL HA     H N N 566 
VAL HB     H N N 567 
VAL HG11   H N N 568 
VAL HG12   H N N 569 
VAL HG13   H N N 570 
VAL HG21   H N N 571 
VAL HG22   H N N 572 
VAL HG23   H N N 573 
VAL HXT    H N N 574 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
ALA N     CA     sing N N 1   
ALA N     H      sing N N 2   
ALA N     H2     sing N N 3   
ALA CA    C      sing N N 4   
ALA CA    CB     sing N N 5   
ALA CA    HA     sing N N 6   
ALA C     O      doub N N 7   
ALA C     OXT    sing N N 8   
ALA CB    HB1    sing N N 9   
ALA CB    HB2    sing N N 10  
ALA CB    HB3    sing N N 11  
ALA OXT   HXT    sing N N 12  
ARG N     CA     sing N N 13  
ARG N     H      sing N N 14  
ARG N     H2     sing N N 15  
ARG CA    C      sing N N 16  
ARG CA    CB     sing N N 17  
ARG CA    HA     sing N N 18  
ARG C     O      doub N N 19  
ARG C     OXT    sing N N 20  
ARG CB    CG     sing N N 21  
ARG CB    HB2    sing N N 22  
ARG CB    HB3    sing N N 23  
ARG CG    CD     sing N N 24  
ARG CG    HG2    sing N N 25  
ARG CG    HG3    sing N N 26  
ARG CD    NE     sing N N 27  
ARG CD    HD2    sing N N 28  
ARG CD    HD3    sing N N 29  
ARG NE    CZ     sing N N 30  
ARG NE    HE     sing N N 31  
ARG CZ    NH1    sing N N 32  
ARG CZ    NH2    doub N N 33  
ARG NH1   HH11   sing N N 34  
ARG NH1   HH12   sing N N 35  
ARG NH2   HH21   sing N N 36  
ARG NH2   HH22   sing N N 37  
ARG OXT   HXT    sing N N 38  
ASN N     CA     sing N N 39  
ASN N     H      sing N N 40  
ASN N     H2     sing N N 41  
ASN CA    C      sing N N 42  
ASN CA    CB     sing N N 43  
ASN CA    HA     sing N N 44  
ASN C     O      doub N N 45  
ASN C     OXT    sing N N 46  
ASN CB    CG     sing N N 47  
ASN CB    HB2    sing N N 48  
ASN CB    HB3    sing N N 49  
ASN CG    OD1    doub N N 50  
ASN CG    ND2    sing N N 51  
ASN ND2   HD21   sing N N 52  
ASN ND2   HD22   sing N N 53  
ASN OXT   HXT    sing N N 54  
ASP N     CA     sing N N 55  
ASP N     H      sing N N 56  
ASP N     H2     sing N N 57  
ASP CA    C      sing N N 58  
ASP CA    CB     sing N N 59  
ASP CA    HA     sing N N 60  
ASP C     O      doub N N 61  
ASP C     OXT    sing N N 62  
ASP CB    CG     sing N N 63  
ASP CB    HB2    sing N N 64  
ASP CB    HB3    sing N N 65  
ASP CG    OD1    doub N N 66  
ASP CG    OD2    sing N N 67  
ASP OD2   HD2    sing N N 68  
ASP OXT   HXT    sing N N 69  
CYS N     CA     sing N N 70  
CYS N     H      sing N N 71  
CYS N     H2     sing N N 72  
CYS CA    C      sing N N 73  
CYS CA    CB     sing N N 74  
CYS CA    HA     sing N N 75  
CYS C     O      doub N N 76  
CYS C     OXT    sing N N 77  
CYS CB    SG     sing N N 78  
CYS CB    HB2    sing N N 79  
CYS CB    HB3    sing N N 80  
CYS SG    HG     sing N N 81  
CYS OXT   HXT    sing N N 82  
DA  OP3   P      sing N N 83  
DA  OP3   HOP3   sing N N 84  
DA  P     OP1    doub N N 85  
DA  P     OP2    sing N N 86  
DA  P     "O5'"  sing N N 87  
DA  OP2   HOP2   sing N N 88  
DA  "O5'" "C5'"  sing N N 89  
DA  "C5'" "C4'"  sing N N 90  
DA  "C5'" "H5'"  sing N N 91  
DA  "C5'" "H5''" sing N N 92  
DA  "C4'" "O4'"  sing N N 93  
DA  "C4'" "C3'"  sing N N 94  
DA  "C4'" "H4'"  sing N N 95  
DA  "O4'" "C1'"  sing N N 96  
DA  "C3'" "O3'"  sing N N 97  
DA  "C3'" "C2'"  sing N N 98  
DA  "C3'" "H3'"  sing N N 99  
DA  "O3'" "HO3'" sing N N 100 
DA  "C2'" "C1'"  sing N N 101 
DA  "C2'" "H2'"  sing N N 102 
DA  "C2'" "H2''" sing N N 103 
DA  "C1'" N9     sing N N 104 
DA  "C1'" "H1'"  sing N N 105 
DA  N9    C8     sing Y N 106 
DA  N9    C4     sing Y N 107 
DA  C8    N7     doub Y N 108 
DA  C8    H8     sing N N 109 
DA  N7    C5     sing Y N 110 
DA  C5    C6     sing Y N 111 
DA  C5    C4     doub Y N 112 
DA  C6    N6     sing N N 113 
DA  C6    N1     doub Y N 114 
DA  N6    H61    sing N N 115 
DA  N6    H62    sing N N 116 
DA  N1    C2     sing Y N 117 
DA  C2    N3     doub Y N 118 
DA  C2    H2     sing N N 119 
DA  N3    C4     sing Y N 120 
DC  OP3   P      sing N N 121 
DC  OP3   HOP3   sing N N 122 
DC  P     OP1    doub N N 123 
DC  P     OP2    sing N N 124 
DC  P     "O5'"  sing N N 125 
DC  OP2   HOP2   sing N N 126 
DC  "O5'" "C5'"  sing N N 127 
DC  "C5'" "C4'"  sing N N 128 
DC  "C5'" "H5'"  sing N N 129 
DC  "C5'" "H5''" sing N N 130 
DC  "C4'" "O4'"  sing N N 131 
DC  "C4'" "C3'"  sing N N 132 
DC  "C4'" "H4'"  sing N N 133 
DC  "O4'" "C1'"  sing N N 134 
DC  "C3'" "O3'"  sing N N 135 
DC  "C3'" "C2'"  sing N N 136 
DC  "C3'" "H3'"  sing N N 137 
DC  "O3'" "HO3'" sing N N 138 
DC  "C2'" "C1'"  sing N N 139 
DC  "C2'" "H2'"  sing N N 140 
DC  "C2'" "H2''" sing N N 141 
DC  "C1'" N1     sing N N 142 
DC  "C1'" "H1'"  sing N N 143 
DC  N1    C2     sing N N 144 
DC  N1    C6     sing N N 145 
DC  C2    O2     doub N N 146 
DC  C2    N3     sing N N 147 
DC  N3    C4     doub N N 148 
DC  C4    N4     sing N N 149 
DC  C4    C5     sing N N 150 
DC  N4    H41    sing N N 151 
DC  N4    H42    sing N N 152 
DC  C5    C6     doub N N 153 
DC  C5    H5     sing N N 154 
DC  C6    H6     sing N N 155 
DG  OP3   P      sing N N 156 
DG  OP3   HOP3   sing N N 157 
DG  P     OP1    doub N N 158 
DG  P     OP2    sing N N 159 
DG  P     "O5'"  sing N N 160 
DG  OP2   HOP2   sing N N 161 
DG  "O5'" "C5'"  sing N N 162 
DG  "C5'" "C4'"  sing N N 163 
DG  "C5'" "H5'"  sing N N 164 
DG  "C5'" "H5''" sing N N 165 
DG  "C4'" "O4'"  sing N N 166 
DG  "C4'" "C3'"  sing N N 167 
DG  "C4'" "H4'"  sing N N 168 
DG  "O4'" "C1'"  sing N N 169 
DG  "C3'" "O3'"  sing N N 170 
DG  "C3'" "C2'"  sing N N 171 
DG  "C3'" "H3'"  sing N N 172 
DG  "O3'" "HO3'" sing N N 173 
DG  "C2'" "C1'"  sing N N 174 
DG  "C2'" "H2'"  sing N N 175 
DG  "C2'" "H2''" sing N N 176 
DG  "C1'" N9     sing N N 177 
DG  "C1'" "H1'"  sing N N 178 
DG  N9    C8     sing Y N 179 
DG  N9    C4     sing Y N 180 
DG  C8    N7     doub Y N 181 
DG  C8    H8     sing N N 182 
DG  N7    C5     sing Y N 183 
DG  C5    C6     sing N N 184 
DG  C5    C4     doub Y N 185 
DG  C6    O6     doub N N 186 
DG  C6    N1     sing N N 187 
DG  N1    C2     sing N N 188 
DG  N1    H1     sing N N 189 
DG  C2    N2     sing N N 190 
DG  C2    N3     doub N N 191 
DG  N2    H21    sing N N 192 
DG  N2    H22    sing N N 193 
DG  N3    C4     sing N N 194 
DT  OP3   P      sing N N 195 
DT  OP3   HOP3   sing N N 196 
DT  P     OP1    doub N N 197 
DT  P     OP2    sing N N 198 
DT  P     "O5'"  sing N N 199 
DT  OP2   HOP2   sing N N 200 
DT  "O5'" "C5'"  sing N N 201 
DT  "C5'" "C4'"  sing N N 202 
DT  "C5'" "H5'"  sing N N 203 
DT  "C5'" "H5''" sing N N 204 
DT  "C4'" "O4'"  sing N N 205 
DT  "C4'" "C3'"  sing N N 206 
DT  "C4'" "H4'"  sing N N 207 
DT  "O4'" "C1'"  sing N N 208 
DT  "C3'" "O3'"  sing N N 209 
DT  "C3'" "C2'"  sing N N 210 
DT  "C3'" "H3'"  sing N N 211 
DT  "O3'" "HO3'" sing N N 212 
DT  "C2'" "C1'"  sing N N 213 
DT  "C2'" "H2'"  sing N N 214 
DT  "C2'" "H2''" sing N N 215 
DT  "C1'" N1     sing N N 216 
DT  "C1'" "H1'"  sing N N 217 
DT  N1    C2     sing N N 218 
DT  N1    C6     sing N N 219 
DT  C2    O2     doub N N 220 
DT  C2    N3     sing N N 221 
DT  N3    C4     sing N N 222 
DT  N3    H3     sing N N 223 
DT  C4    O4     doub N N 224 
DT  C4    C5     sing N N 225 
DT  C5    C7     sing N N 226 
DT  C5    C6     doub N N 227 
DT  C7    H71    sing N N 228 
DT  C7    H72    sing N N 229 
DT  C7    H73    sing N N 230 
DT  C6    H6     sing N N 231 
GLN N     CA     sing N N 232 
GLN N     H      sing N N 233 
GLN N     H2     sing N N 234 
GLN CA    C      sing N N 235 
GLN CA    CB     sing N N 236 
GLN CA    HA     sing N N 237 
GLN C     O      doub N N 238 
GLN C     OXT    sing N N 239 
GLN CB    CG     sing N N 240 
GLN CB    HB2    sing N N 241 
GLN CB    HB3    sing N N 242 
GLN CG    CD     sing N N 243 
GLN CG    HG2    sing N N 244 
GLN CG    HG3    sing N N 245 
GLN CD    OE1    doub N N 246 
GLN CD    NE2    sing N N 247 
GLN NE2   HE21   sing N N 248 
GLN NE2   HE22   sing N N 249 
GLN OXT   HXT    sing N N 250 
GLU N     CA     sing N N 251 
GLU N     H      sing N N 252 
GLU N     H2     sing N N 253 
GLU CA    C      sing N N 254 
GLU CA    CB     sing N N 255 
GLU CA    HA     sing N N 256 
GLU C     O      doub N N 257 
GLU C     OXT    sing N N 258 
GLU CB    CG     sing N N 259 
GLU CB    HB2    sing N N 260 
GLU CB    HB3    sing N N 261 
GLU CG    CD     sing N N 262 
GLU CG    HG2    sing N N 263 
GLU CG    HG3    sing N N 264 
GLU CD    OE1    doub N N 265 
GLU CD    OE2    sing N N 266 
GLU OE2   HE2    sing N N 267 
GLU OXT   HXT    sing N N 268 
GLY N     CA     sing N N 269 
GLY N     H      sing N N 270 
GLY N     H2     sing N N 271 
GLY CA    C      sing N N 272 
GLY CA    HA2    sing N N 273 
GLY CA    HA3    sing N N 274 
GLY C     O      doub N N 275 
GLY C     OXT    sing N N 276 
GLY OXT   HXT    sing N N 277 
HIS N     CA     sing N N 278 
HIS N     H      sing N N 279 
HIS N     H2     sing N N 280 
HIS CA    C      sing N N 281 
HIS CA    CB     sing N N 282 
HIS CA    HA     sing N N 283 
HIS C     O      doub N N 284 
HIS C     OXT    sing N N 285 
HIS CB    CG     sing N N 286 
HIS CB    HB2    sing N N 287 
HIS CB    HB3    sing N N 288 
HIS CG    ND1    sing Y N 289 
HIS CG    CD2    doub Y N 290 
HIS ND1   CE1    doub Y N 291 
HIS ND1   HD1    sing N N 292 
HIS CD2   NE2    sing Y N 293 
HIS CD2   HD2    sing N N 294 
HIS CE1   NE2    sing Y N 295 
HIS CE1   HE1    sing N N 296 
HIS NE2   HE2    sing N N 297 
HIS OXT   HXT    sing N N 298 
HOH O     H1     sing N N 299 
HOH O     H2     sing N N 300 
ILE N     CA     sing N N 301 
ILE N     H      sing N N 302 
ILE N     H2     sing N N 303 
ILE CA    C      sing N N 304 
ILE CA    CB     sing N N 305 
ILE CA    HA     sing N N 306 
ILE C     O      doub N N 307 
ILE C     OXT    sing N N 308 
ILE CB    CG1    sing N N 309 
ILE CB    CG2    sing N N 310 
ILE CB    HB     sing N N 311 
ILE CG1   CD1    sing N N 312 
ILE CG1   HG12   sing N N 313 
ILE CG1   HG13   sing N N 314 
ILE CG2   HG21   sing N N 315 
ILE CG2   HG22   sing N N 316 
ILE CG2   HG23   sing N N 317 
ILE CD1   HD11   sing N N 318 
ILE CD1   HD12   sing N N 319 
ILE CD1   HD13   sing N N 320 
ILE OXT   HXT    sing N N 321 
LEU N     CA     sing N N 322 
LEU N     H      sing N N 323 
LEU N     H2     sing N N 324 
LEU CA    C      sing N N 325 
LEU CA    CB     sing N N 326 
LEU CA    HA     sing N N 327 
LEU C     O      doub N N 328 
LEU C     OXT    sing N N 329 
LEU CB    CG     sing N N 330 
LEU CB    HB2    sing N N 331 
LEU CB    HB3    sing N N 332 
LEU CG    CD1    sing N N 333 
LEU CG    CD2    sing N N 334 
LEU CG    HG     sing N N 335 
LEU CD1   HD11   sing N N 336 
LEU CD1   HD12   sing N N 337 
LEU CD1   HD13   sing N N 338 
LEU CD2   HD21   sing N N 339 
LEU CD2   HD22   sing N N 340 
LEU CD2   HD23   sing N N 341 
LEU OXT   HXT    sing N N 342 
LYS N     CA     sing N N 343 
LYS N     H      sing N N 344 
LYS N     H2     sing N N 345 
LYS CA    C      sing N N 346 
LYS CA    CB     sing N N 347 
LYS CA    HA     sing N N 348 
LYS C     O      doub N N 349 
LYS C     OXT    sing N N 350 
LYS CB    CG     sing N N 351 
LYS CB    HB2    sing N N 352 
LYS CB    HB3    sing N N 353 
LYS CG    CD     sing N N 354 
LYS CG    HG2    sing N N 355 
LYS CG    HG3    sing N N 356 
LYS CD    CE     sing N N 357 
LYS CD    HD2    sing N N 358 
LYS CD    HD3    sing N N 359 
LYS CE    NZ     sing N N 360 
LYS CE    HE2    sing N N 361 
LYS CE    HE3    sing N N 362 
LYS NZ    HZ1    sing N N 363 
LYS NZ    HZ2    sing N N 364 
LYS NZ    HZ3    sing N N 365 
LYS OXT   HXT    sing N N 366 
MET N     CA     sing N N 367 
MET N     H      sing N N 368 
MET N     H2     sing N N 369 
MET CA    C      sing N N 370 
MET CA    CB     sing N N 371 
MET CA    HA     sing N N 372 
MET C     O      doub N N 373 
MET C     OXT    sing N N 374 
MET CB    CG     sing N N 375 
MET CB    HB2    sing N N 376 
MET CB    HB3    sing N N 377 
MET CG    SD     sing N N 378 
MET CG    HG2    sing N N 379 
MET CG    HG3    sing N N 380 
MET SD    CE     sing N N 381 
MET CE    HE1    sing N N 382 
MET CE    HE2    sing N N 383 
MET CE    HE3    sing N N 384 
MET OXT   HXT    sing N N 385 
NRI P     O1P    doub N N 386 
NRI P     O2P    sing N N 387 
NRI P     O3P    sing N N 388 
NRI P     "O5'"  sing N N 389 
NRI O2P   HOP2   sing N N 390 
NRI O3P   HOP3   sing N N 391 
NRI "O5'" "C5'"  sing N N 392 
NRI "C2'" "C3'"  sing N N 393 
NRI "C2'" "N1'"  sing N N 394 
NRI "C2'" "H2'"  sing N N 395 
NRI "C2'" "H2''" sing N N 396 
NRI "C5'" "C4'"  sing N N 397 
NRI "C5'" "H5'"  sing N N 398 
NRI "C5'" "H5''" sing N N 399 
NRI "C4'" "C3'"  sing N N 400 
NRI "C4'" "C6'"  sing N N 401 
NRI "C4'" "H4'"  sing N N 402 
NRI "C3'" "O3'"  sing N N 403 
NRI "C3'" "H3'"  sing N N 404 
NRI "C6'" "N1'"  sing N N 405 
NRI "C6'" "H6'"  sing N N 406 
NRI "C6'" "H6''" sing N N 407 
NRI "N1'" "HN1'" sing N N 408 
NRI "O3'" "HO3'" sing N N 409 
PHE N     CA     sing N N 410 
PHE N     H      sing N N 411 
PHE N     H2     sing N N 412 
PHE CA    C      sing N N 413 
PHE CA    CB     sing N N 414 
PHE CA    HA     sing N N 415 
PHE C     O      doub N N 416 
PHE C     OXT    sing N N 417 
PHE CB    CG     sing N N 418 
PHE CB    HB2    sing N N 419 
PHE CB    HB3    sing N N 420 
PHE CG    CD1    doub Y N 421 
PHE CG    CD2    sing Y N 422 
PHE CD1   CE1    sing Y N 423 
PHE CD1   HD1    sing N N 424 
PHE CD2   CE2    doub Y N 425 
PHE CD2   HD2    sing N N 426 
PHE CE1   CZ     doub Y N 427 
PHE CE1   HE1    sing N N 428 
PHE CE2   CZ     sing Y N 429 
PHE CE2   HE2    sing N N 430 
PHE CZ    HZ     sing N N 431 
PHE OXT   HXT    sing N N 432 
PO4 P     O1     doub N N 433 
PO4 P     O2     sing N N 434 
PO4 P     O3     sing N N 435 
PO4 P     O4     sing N N 436 
PRO N     CA     sing N N 437 
PRO N     CD     sing N N 438 
PRO N     H      sing N N 439 
PRO CA    C      sing N N 440 
PRO CA    CB     sing N N 441 
PRO CA    HA     sing N N 442 
PRO C     O      doub N N 443 
PRO C     OXT    sing N N 444 
PRO CB    CG     sing N N 445 
PRO CB    HB2    sing N N 446 
PRO CB    HB3    sing N N 447 
PRO CG    CD     sing N N 448 
PRO CG    HG2    sing N N 449 
PRO CG    HG3    sing N N 450 
PRO CD    HD2    sing N N 451 
PRO CD    HD3    sing N N 452 
PRO OXT   HXT    sing N N 453 
SER N     CA     sing N N 454 
SER N     H      sing N N 455 
SER N     H2     sing N N 456 
SER CA    C      sing N N 457 
SER CA    CB     sing N N 458 
SER CA    HA     sing N N 459 
SER C     O      doub N N 460 
SER C     OXT    sing N N 461 
SER CB    OG     sing N N 462 
SER CB    HB2    sing N N 463 
SER CB    HB3    sing N N 464 
SER OG    HG     sing N N 465 
SER OXT   HXT    sing N N 466 
THR N     CA     sing N N 467 
THR N     H      sing N N 468 
THR N     H2     sing N N 469 
THR CA    C      sing N N 470 
THR CA    CB     sing N N 471 
THR CA    HA     sing N N 472 
THR C     O      doub N N 473 
THR C     OXT    sing N N 474 
THR CB    OG1    sing N N 475 
THR CB    CG2    sing N N 476 
THR CB    HB     sing N N 477 
THR OG1   HG1    sing N N 478 
THR CG2   HG21   sing N N 479 
THR CG2   HG22   sing N N 480 
THR CG2   HG23   sing N N 481 
THR OXT   HXT    sing N N 482 
TRP N     CA     sing N N 483 
TRP N     H      sing N N 484 
TRP N     H2     sing N N 485 
TRP CA    C      sing N N 486 
TRP CA    CB     sing N N 487 
TRP CA    HA     sing N N 488 
TRP C     O      doub N N 489 
TRP C     OXT    sing N N 490 
TRP CB    CG     sing N N 491 
TRP CB    HB2    sing N N 492 
TRP CB    HB3    sing N N 493 
TRP CG    CD1    doub Y N 494 
TRP CG    CD2    sing Y N 495 
TRP CD1   NE1    sing Y N 496 
TRP CD1   HD1    sing N N 497 
TRP CD2   CE2    doub Y N 498 
TRP CD2   CE3    sing Y N 499 
TRP NE1   CE2    sing Y N 500 
TRP NE1   HE1    sing N N 501 
TRP CE2   CZ2    sing Y N 502 
TRP CE3   CZ3    doub Y N 503 
TRP CE3   HE3    sing N N 504 
TRP CZ2   CH2    doub Y N 505 
TRP CZ2   HZ2    sing N N 506 
TRP CZ3   CH2    sing Y N 507 
TRP CZ3   HZ3    sing N N 508 
TRP CH2   HH2    sing N N 509 
TRP OXT   HXT    sing N N 510 
TYR N     CA     sing N N 511 
TYR N     H      sing N N 512 
TYR N     H2     sing N N 513 
TYR CA    C      sing N N 514 
TYR CA    CB     sing N N 515 
TYR CA    HA     sing N N 516 
TYR C     O      doub N N 517 
TYR C     OXT    sing N N 518 
TYR CB    CG     sing N N 519 
TYR CB    HB2    sing N N 520 
TYR CB    HB3    sing N N 521 
TYR CG    CD1    doub Y N 522 
TYR CG    CD2    sing Y N 523 
TYR CD1   CE1    sing Y N 524 
TYR CD1   HD1    sing N N 525 
TYR CD2   CE2    doub Y N 526 
TYR CD2   HD2    sing N N 527 
TYR CE1   CZ     doub Y N 528 
TYR CE1   HE1    sing N N 529 
TYR CE2   CZ     sing Y N 530 
TYR CE2   HE2    sing N N 531 
TYR CZ    OH     sing N N 532 
TYR OH    HH     sing N N 533 
TYR OXT   HXT    sing N N 534 
URA N1    C2     sing N N 535 
URA N1    C6     sing N N 536 
URA N1    HN1    sing N N 537 
URA C2    O2     doub N N 538 
URA C2    N3     sing N N 539 
URA N3    C4     sing N N 540 
URA N3    HN3    sing N N 541 
URA C4    O4     doub N N 542 
URA C4    C5     sing N N 543 
URA C5    C6     doub N N 544 
URA C5    H5     sing N N 545 
URA C6    H6     sing N N 546 
VAL N     CA     sing N N 547 
VAL N     H      sing N N 548 
VAL N     H2     sing N N 549 
VAL CA    C      sing N N 550 
VAL CA    CB     sing N N 551 
VAL CA    HA     sing N N 552 
VAL C     O      doub N N 553 
VAL C     OXT    sing N N 554 
VAL CB    CG1    sing N N 555 
VAL CB    CG2    sing N N 556 
VAL CB    HB     sing N N 557 
VAL CG1   HG11   sing N N 558 
VAL CG1   HG12   sing N N 559 
VAL CG1   HG13   sing N N 560 
VAL CG2   HG21   sing N N 561 
VAL CG2   HG22   sing N N 562 
VAL CG2   HG23   sing N N 563 
VAL OXT   HXT    sing N N 564 
# 
loop_
_ndb_struct_conf_na.entry_id 
_ndb_struct_conf_na.feature 
1Q3F 'double helix'         
1Q3F 'b-form double helix'  
1Q3F 'mismatched base pair' 
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 A DT 1 1_555 B DA 10 1_555 -0.239 -0.285 -0.218 -14.967 -5.142  8.076  1 B_DT2:DA30_C  B 2  ? C 30 ? 20 1 
1 A DG 2 1_555 B DC 9  1_555 -0.173 0.007  0.550  9.393   0.895   5.539  2 B_DG3:DC29_C  B 3  ? C 29 ? 19 1 
1 A DT 3 1_555 B DA 8  1_555 0.033  0.109  -0.294 27.843  -8.266  2.935  3 B_DT4:DA28_C  B 4  ? C 28 ? 20 1 
1 A DA 5 1_555 B DT 6  1_555 -0.148 -0.176 -0.103 -5.293  -6.190  1.418  4 B_DA6:DT26_C  B 6  ? C 26 ? 20 1 
1 A DT 6 1_555 B DA 5  1_555 -0.036 0.043  0.042  4.740   -15.061 4.384  5 B_DT7:DA25_C  B 7  ? C 25 ? 20 1 
1 A DC 7 1_555 B DG 4  1_555 0.258  0.019  -0.137 0.854   -15.429 3.150  6 B_DC8:DG24_C  B 8  ? C 24 ? 19 1 
1 A DT 8 1_555 B DA 3  1_555 0.137  -0.053 0.116  -10.916 -12.992 -0.036 7 B_DT9:DA23_C  B 9  ? C 23 ? 20 1 
1 A DT 9 1_555 B DA 2  1_555 -0.371 0.011  0.108  -14.082 -11.141 -0.667 8 B_DT10:DA22_C B 10 ? C 22 ? 20 1 
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 A DT 1 1_555 B DA 10 1_555 A DG 2 1_555 B DC 9 1_555 0.322  -0.845 2.635 -5.274 12.741 22.606 -4.328 -1.730 1.794 29.264 12.114 
26.433 1 BB_DT2DG3:DC29DA30_CC  B 2 ? C 30 ? B 3  ? C 29 ? 
1 A DG 2 1_555 B DC 9  1_555 A DT 3 1_555 B DA 8 1_555 -0.898 -0.223 2.901 4.948  6.015  31.603 -1.303 2.348  2.648 10.840 -8.916 
32.525 2 BB_DG3DT4:DA28DC29_CC  B 3 ? C 29 ? B 4  ? C 28 ? 
1 A DA 5 1_555 B DT 6  1_555 A DT 6 1_555 B DA 5 1_555 -0.151 -0.589 3.015 -0.304 2.521  30.449 -1.576 0.231  2.959 4.789  0.578  
30.552 3 BB_DA6DT7:DA25DT26_CC  B 6 ? C 26 ? B 7  ? C 25 ? 
1 A DT 6 1_555 B DA 5  1_555 A DC 7 1_555 B DG 4 1_555 -0.046 -0.071 3.284 0.856  0.396  38.849 -0.155 0.174  3.281 0.595  -1.287 
38.860 4 BB_DT7DC8:DG24DA25_CC  B 7 ? C 25 ? B 8  ? C 24 ? 
1 A DC 7 1_555 B DG 4  1_555 A DT 8 1_555 B DA 3 1_555 -0.025 -0.464 3.543 0.533  5.766  36.836 -1.546 0.115  3.433 9.055  -0.838 
37.272 5 BB_DC8DT9:DA23DG24_CC  B 8 ? C 24 ? B 9  ? C 23 ? 
1 A DT 8 1_555 B DA 3  1_555 A DT 9 1_555 B DA 2 1_555 0.023  0.136  3.371 0.151  3.095  33.252 -0.293 -0.014 3.370 5.393  -0.263 
33.392 6 BB_DT9DT10:DA22DA23_CC B 9 ? C 23 ? B 10 ? C 22 ? 
# 
loop_
_pdbx_entity_nonpoly.entity_id 
_pdbx_entity_nonpoly.name 
_pdbx_entity_nonpoly.comp_id 
4 URACIL          URA 
5 'PHOSPHATE ION' PO4 
6 water           HOH 
# 
_pdbx_initial_refinement_model.id               1 
_pdbx_initial_refinement_model.entity_id_list   ? 
_pdbx_initial_refinement_model.type             'experimental model' 
_pdbx_initial_refinement_model.source_name      PDB 
_pdbx_initial_refinement_model.accession_code   1AKX 
_pdbx_initial_refinement_model.details          'PDB entry 1AKX' 
#