HEADER HYDROLASE 13-AUG-03 1Q6S
TITLE THE STRUCTURE OF PHOSPHOTYROSINE PHOSPHATASE 1B IN COMPLEX WITH
TITLE 2 COMPOUND 9
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: PROTEIN-TYROSINE PHOSPHATASE, NON-RECEPTOR TYPE 1;
COMPND 3 CHAIN: A, B;
COMPND 4 FRAGMENT: CATALYTIC DOMAIN;
COMPND 5 SYNONYM: PROTEIN-TYROSINE PHOSPHATASE 1B, PTP-1B;
COMPND 6 EC: 3.1.3.48;
COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: PTPN1 OR PTP1B;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PFLAG-2
KEYWDS PHOSPHATASE, SECONDARY BINDING SITE, SELECTIVITY, HYDROLASE
EXPDTA X-RAY DIFFRACTION
AUTHOR G.SCAPIN,S.B.PATEL,J.W.BECKER,Q.WANG,C.DESPONTS,D.WADDLETON,K.SKOREY,
AUTHOR 2 W.CROMLISH,C.BAYLY,M.THERIEN,J.Y.GAUTHIER,C.S.LI,C.K.LAU,
AUTHOR 3 C.RAMACHANDRAN,B.P.KENNEDY,E.ASANTE-APPIAH
REVDAT 5 16-AUG-23 1Q6S 1 REMARK SEQADV LINK
REVDAT 4 11-OCT-17 1Q6S 1 REMARK
REVDAT 3 24-FEB-09 1Q6S 1 VERSN
REVDAT 2 14-OCT-03 1Q6S 1 JRNL
REVDAT 1 30-SEP-03 1Q6S 0
JRNL AUTH G.SCAPIN,S.B.PATEL,J.W.BECKER,Q.WANG,C.DESPONTS,D.WADDLETON,
JRNL AUTH 2 K.SKOREY,W.CROMLISH,C.BAYLY,M.THERIEN,J.Y.GAUTHIER,C.S.LI,
JRNL AUTH 3 C.K.LAU,C.RAMACHANDRAN,B.P.KENNEDY,E.ASANTE-APPIAH
JRNL TITL THE STRUCTURAL BASIS FOR THE SELECTIVITY OF BENZOTRIAZOLE
JRNL TITL 2 INHIBITORS OF PTP1B
JRNL REF BIOCHEMISTRY V. 42 11451 2003
JRNL REFN ISSN 0006-2960
JRNL PMID 14516196
JRNL DOI 10.1021/BI035098J
REMARK 2
REMARK 2 RESOLUTION. 2.20 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : CNX
REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-
REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,
REMARK 3 : READ,RICE,SIMONSON,WARREN,ACCELRYS
REMARK 3 : SOFTWARE INC.(BADGER,BERARD,KUMAR,SZALMA,
REMARK 3 : YIP,DZAKULA)
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL
REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL
REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.1
REMARK 3 NUMBER OF REFLECTIONS : 53236
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.196
REMARK 3 R VALUE (WORKING SET) : 0.196
REMARK 3 FREE R VALUE : 0.233
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.000
REMARK 3 FREE R VALUE TEST SET COUNT : 3814
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL
REMARK 3
REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA.
REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL
REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL
REMARK 3 FREE R VALUE (NO CUTOFF) : NULL
REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL
REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL
REMARK 3 ESTIMATED ERROR OF FREE R VALUE (NO CUTOFF) : NULL
REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 54824
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : NULL
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.30
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.50
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4723
REMARK 3 BIN R VALUE (WORKING SET) : 0.2260
REMARK 3 BIN FREE R VALUE : 0.2930
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 6.70
REMARK 3 BIN FREE R VALUE TEST SET COUNT : 358
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 4698
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 117
REMARK 3 SOLVENT ATOMS : 396
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 24.60
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.20
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : 4.88700
REMARK 3 B22 (A**2) : 1.68100
REMARK 3 B33 (A**2) : -6.56800
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.24
REMARK 3 ESD FROM SIGMAA (A) : 0.18
REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00
REMARK 3
REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.29
REMARK 3 ESD FROM C-V SIGMAA (A) : 0.22
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : 0.009
REMARK 3 BOND ANGLES (DEGREES) : 1.380
REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.49
REMARK 3 IMPROPER ANGLES (DEGREES) : 0.890
REMARK 3
REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA
REMARK 3 MAIN-CHAIN BOND (A**2) : 1.110 ; 1.500
REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.460 ; 2.000
REMARK 3 SIDE-CHAIN BOND (A**2) : 1.920 ; 2.000
REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.200 ; 2.500
REMARK 3
REMARK 3 BULK SOLVENT MODELING.
REMARK 3 METHOD USED : MASK
REMARK 3 KSOL : 0.41
REMARK 3 BSOL : 42.10
REMARK 3
REMARK 3 NCS MODEL : NULL
REMARK 3
REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT
REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL
REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL
REMARK 3
REMARK 3 PARAMETER FILE 1 : NULL
REMARK 3 TOPOLOGY FILE 1 : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 1Q6S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-AUG-03.
REMARK 100 THE DEPOSITION ID IS D_1000019987.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 24-AUG-99
REMARK 200 TEMPERATURE (KELVIN) : 100.0
REMARK 200 PH : 7.00
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : APS
REMARK 200 BEAMLINE : 17-BM
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.0
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : X-GEN
REMARK 200 DATA SCALING SOFTWARE : X-GEN
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54806
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200
REMARK 200 RESOLUTION RANGE LOW (A) : 20.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8
REMARK 200 DATA REDUNDANCY : 7.100
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : 0.06200
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.7000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30
REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0
REMARK 200 DATA REDUNDANCY IN SHELL : 7.20
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : 0.21200
REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.100
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS
REMARK 200 SOFTWARE USED: CNX
REMARK 200 STARTING MODEL: PDB ENTRY 1Q6P
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 66.51
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.67
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, MGCL2, HEPES, PH 7.00, VAPOR
REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X+1/2,-Y,Z+1/2
REMARK 290 3555 -X,Y+1/2,-Z+1/2
REMARK 290 4555 X+1/2,-Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 43.92900
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.05900
REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.88050
REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 69.05900
REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.92900
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.88050
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1, 2
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350
REMARK 350 BIOMOLECULE: 2
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET A 489
REMARK 465 ASP A 490
REMARK 465 TYR A 491
REMARK 465 LYS A 492
REMARK 465 ASP A 493
REMARK 465 ASP A 494
REMARK 465 ASP A 495
REMARK 465 ASP A 496
REMARK 465 SER A 786
REMARK 465 VAL A 787
REMARK 465 GLN A 788
REMARK 465 ASP A 789
REMARK 465 GLN A 790
REMARK 465 TRP A 791
REMARK 465 LYS A 792
REMARK 465 GLU A 793
REMARK 465 LEU A 794
REMARK 465 SER A 795
REMARK 465 HIS A 796
REMARK 465 GLU A 797
REMARK 465 ASP A 798
REMARK 465 MET B 989
REMARK 465 ASP B 990
REMARK 465 TYR B 991
REMARK 465 LYS B 992
REMARK 465 ASP B 993
REMARK 465 ASP B 994
REMARK 465 ASP B 995
REMARK 465 ASP B 996
REMARK 465 SER B 1286
REMARK 465 VAL B 1287
REMARK 465 GLN B 1288
REMARK 465 ASP B 1289
REMARK 465 GLN B 1290
REMARK 465 TRP B 1291
REMARK 465 LYS B 1292
REMARK 465 GLU B 1293
REMARK 465 LEU B 1294
REMARK 465 SER B 1295
REMARK 465 HIS B 1296
REMARK 465 GLU B 1297
REMARK 465 ASP B 1298
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 LYS A 497 CG CD CE NZ
REMARK 470 LEU A 498 CG CD1 CD2
REMARK 470 MET A 501 CG SD CE
REMARK 470 LYS B 997 CG CD CE NZ
REMARK 470 LEU B 998 CG CD1 CD2
REMARK 470 MET B1001 CG SD CE
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 LEU A 498 21.49 -71.76
REMARK 500 HIS A 560 26.31 -78.32
REMARK 500 ASN A 611 -165.55 -117.25
REMARK 500 LYS A 620 -9.70 62.40
REMARK 500 CYS A 621 134.90 -174.77
REMARK 500 LYS A 631 70.00 -116.35
REMARK 500 CYS A 715 -130.29 -138.12
REMARK 500 ILE A 719 -43.50 -136.02
REMARK 500 ILE A 761 112.48 77.93
REMARK 500 LEU B 998 36.14 -79.15
REMARK 500 ASP B1063 -86.23 -57.79
REMARK 500 ASN B1111 -167.83 -111.62
REMARK 500 SER B1118 -71.59 -78.35
REMARK 500 LEU B1119 74.35 -61.00
REMARK 500 CYS B1121 134.04 -173.22
REMARK 500 CYS B1215 -131.68 -136.91
REMARK 500 ILE B1219 -40.93 -136.64
REMARK 500 ILE B1261 113.78 76.72
REMARK 500 ILE B1281 -75.96 -61.67
REMARK 500 ASP B1284 136.65 174.18
REMARK 500
REMARK 500 REMARK: NULL
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 MG A4000 MG
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 HOH A4001 O
REMARK 620 2 HOH A4002 O 108.7
REMARK 620 3 HOH A4003 O 91.5 107.3
REMARK 620 4 HOH A4004 O 87.6 90.3 161.7
REMARK 620 5 HOH A4005 O 78.8 163.6 86.7 75.1
REMARK 620 6 HOH A4006 O 165.5 85.3 88.0 88.5 86.7
REMARK 620 N 1 2 3 4 5
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 MG B5000 MG
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 HOH B3185 O
REMARK 620 2 HOH B5001 O 59.8
REMARK 620 3 HOH B5002 O 115.7 56.5
REMARK 620 4 HOH B5003 O 116.3 106.4 88.9
REMARK 620 5 HOH B5004 O 76.4 64.5 70.6 159.3
REMARK 620 6 HOH B5005 O 69.9 119.6 140.4 125.3 73.4
REMARK 620 7 HOH B5006 O 148.0 109.9 58.4 95.5 72.2 95.2
REMARK 620 N 1 2 3 4 5 6
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 2011
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 2012
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 2013
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 4000
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 5000
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 214 A 801
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC7
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 214 B 1301
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC8
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 6000
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 1Q6J RELATED DB: PDB
REMARK 900 SAME PROTEIN IN COMPLEX WITH [4-(2-(1H-1,2,3-BENZOTRIAZOL-1-YL)-3-{
REMARK 900 4-[DIFLUORO(PHOSPHONO)METHYL]PHENYL}-2-PHENYLPROPYL)PHENYL]
REMARK 900 (DIFLUORO)METHYLPHOSPHONIC ACID
REMARK 900 RELATED ID: 1Q6M RELATED DB: PDB
REMARK 900 SAME PROTEIN IN COMPLEX WITH {[2-(1H-1,2,3-BENZOTRIAZOL-1-YL)-2-(3,
REMARK 900 4-DIFLUOROPHENYL)PROPANE-1,3-DIYL]BIS[4,1-
REMARK 900 PHENYLENE(DIFLUOROMETHYLENE)]}BISPHOSPHONIC ACID
REMARK 900 RELATED ID: 1Q6N RELATED DB: PDB
REMARK 900 SAME PROTEIN IN COMPLEX WITH {4-[(2S,4E)-2-(1,3-BENZOTHIAZOL-2-YL)-
REMARK 900 2-(1H-1,2,3-BENZOTRIAZOL-1-YL)-5-PHENYLPENT-4-ENYL]PHENYL}(DIFLUORO)
REMARK 900 METHYLPHOSPHONIC ACID
REMARK 900 RELATED ID: 1Q6P RELATED DB: PDB
REMARK 900 SAME PROTEIN IN COMPLEX WITH [{4-[(4E)-2-(1,3-BENZOTHIAZOL-2-YL)-2-
REMARK 900 (1H-1,2,3-BENZOTRIAZOL-1-YL)-5-PHENYLPENT-4-EN-1-YL]PHENYL}
REMARK 900 (DIFLUORO)METHYL]PHOSPHONIC ACID
REMARK 900 RELATED ID: 1Q6T RELATED DB: PDB
REMARK 900 SAME PROTEIN IN COMPLEX WITH [6-[4-(2-(1H-1,2,3-BENZOTRIAZOL-1-YL)-
REMARK 900 3-{4-[DIFLUORO(PHOSPHONO)METHYL]PHENYL}-2-PHENYLPROPYL)PHENYL]-2-(1-
REMARK 900 METHOXY-3-METHYLBUTYL)QUINOLIN-8-YL]PHOSPHONIC ACID
DBREF 1Q6S A 501 798 UNP P18031 PTN1_HUMAN 1 298
DBREF 1Q6S B 1001 1298 UNP P18031 PTN1_HUMAN 1 298
SEQADV 1Q6S MET A 489 UNP P18031 CLONING ARTIFACT
SEQADV 1Q6S ASP A 490 UNP P18031 CLONING ARTIFACT
SEQADV 1Q6S TYR A 491 UNP P18031 CLONING ARTIFACT
SEQADV 1Q6S LYS A 492 UNP P18031 CLONING ARTIFACT
SEQADV 1Q6S ASP A 493 UNP P18031 CLONING ARTIFACT
SEQADV 1Q6S ASP A 494 UNP P18031 CLONING ARTIFACT
SEQADV 1Q6S ASP A 495 UNP P18031 CLONING ARTIFACT
SEQADV 1Q6S ASP A 496 UNP P18031 CLONING ARTIFACT
SEQADV 1Q6S LYS A 497 UNP P18031 CLONING ARTIFACT
SEQADV 1Q6S LEU A 498 UNP P18031 CLONING ARTIFACT
SEQADV 1Q6S GLU A 499 UNP P18031 CLONING ARTIFACT
SEQADV 1Q6S PHE A 500 UNP P18031 CLONING ARTIFACT
SEQADV 1Q6S MET B 989 UNP P18031 CLONING ARTIFACT
SEQADV 1Q6S ASP B 990 UNP P18031 CLONING ARTIFACT
SEQADV 1Q6S TYR B 991 UNP P18031 CLONING ARTIFACT
SEQADV 1Q6S LYS B 992 UNP P18031 CLONING ARTIFACT
SEQADV 1Q6S ASP B 993 UNP P18031 CLONING ARTIFACT
SEQADV 1Q6S ASP B 994 UNP P18031 CLONING ARTIFACT
SEQADV 1Q6S ASP B 995 UNP P18031 CLONING ARTIFACT
SEQADV 1Q6S ASP B 996 UNP P18031 CLONING ARTIFACT
SEQADV 1Q6S LYS B 997 UNP P18031 CLONING ARTIFACT
SEQADV 1Q6S LEU B 998 UNP P18031 CLONING ARTIFACT
SEQADV 1Q6S GLU B 999 UNP P18031 CLONING ARTIFACT
SEQADV 1Q6S PHE B 1000 UNP P18031 CLONING ARTIFACT
SEQRES 1 A 310 MET ASP TYR LYS ASP ASP ASP ASP LYS LEU GLU PHE MET
SEQRES 2 A 310 GLU MET GLU LYS GLU PHE GLU GLN ILE ASP LYS SER GLY
SEQRES 3 A 310 SER TRP ALA ALA ILE TYR GLN ASP ILE ARG HIS GLU ALA
SEQRES 4 A 310 SER ASP PHE PRO CYS ARG VAL ALA LYS LEU PRO LYS ASN
SEQRES 5 A 310 LYS ASN ARG ASN ARG TYR ARG ASP VAL SER PRO PHE ASP
SEQRES 6 A 310 HIS SER ARG ILE LYS LEU HIS GLN GLU ASP ASN ASP TYR
SEQRES 7 A 310 ILE ASN ALA SER LEU ILE LYS MET GLU GLU ALA GLN ARG
SEQRES 8 A 310 SER TYR ILE LEU THR GLN GLY PRO LEU PRO ASN THR CYS
SEQRES 9 A 310 GLY HIS PHE TRP GLU MET VAL TRP GLU GLN LYS SER ARG
SEQRES 10 A 310 GLY VAL VAL MET LEU ASN ARG VAL MET GLU LYS GLY SER
SEQRES 11 A 310 LEU LYS CYS ALA GLN TYR TRP PRO GLN LYS GLU GLU LYS
SEQRES 12 A 310 GLU MET ILE PHE GLU ASP THR ASN LEU LYS LEU THR LEU
SEQRES 13 A 310 ILE SER GLU ASP ILE LYS SER TYR TYR THR VAL ARG GLN
SEQRES 14 A 310 LEU GLU LEU GLU ASN LEU THR THR GLN GLU THR ARG GLU
SEQRES 15 A 310 ILE LEU HIS PHE HIS TYR THR THR TRP PRO ASP PHE GLY
SEQRES 16 A 310 VAL PRO GLU SER PRO ALA SER PHE LEU ASN PHE LEU PHE
SEQRES 17 A 310 LYS VAL ARG GLU SER GLY SER LEU SER PRO GLU HIS GLY
SEQRES 18 A 310 PRO VAL VAL VAL HIS CYS SER ALA GLY ILE GLY ARG SER
SEQRES 19 A 310 GLY THR PHE CYS LEU ALA ASP THR CYS LEU LEU LEU MET
SEQRES 20 A 310 ASP LYS ARG LYS ASP PRO SER SER VAL ASP ILE LYS LYS
SEQRES 21 A 310 VAL LEU LEU GLU MET ARG LYS PHE ARG MET GLY LEU ILE
SEQRES 22 A 310 GLN THR ALA ASP GLN LEU ARG PHE SER TYR LEU ALA VAL
SEQRES 23 A 310 ILE GLU GLY ALA LYS PHE ILE MET GLY ASP SER SER VAL
SEQRES 24 A 310 GLN ASP GLN TRP LYS GLU LEU SER HIS GLU ASP
SEQRES 1 B 310 MET ASP TYR LYS ASP ASP ASP ASP LYS LEU GLU PHE MET
SEQRES 2 B 310 GLU MET GLU LYS GLU PHE GLU GLN ILE ASP LYS SER GLY
SEQRES 3 B 310 SER TRP ALA ALA ILE TYR GLN ASP ILE ARG HIS GLU ALA
SEQRES 4 B 310 SER ASP PHE PRO CYS ARG VAL ALA LYS LEU PRO LYS ASN
SEQRES 5 B 310 LYS ASN ARG ASN ARG TYR ARG ASP VAL SER PRO PHE ASP
SEQRES 6 B 310 HIS SER ARG ILE LYS LEU HIS GLN GLU ASP ASN ASP TYR
SEQRES 7 B 310 ILE ASN ALA SER LEU ILE LYS MET GLU GLU ALA GLN ARG
SEQRES 8 B 310 SER TYR ILE LEU THR GLN GLY PRO LEU PRO ASN THR CYS
SEQRES 9 B 310 GLY HIS PHE TRP GLU MET VAL TRP GLU GLN LYS SER ARG
SEQRES 10 B 310 GLY VAL VAL MET LEU ASN ARG VAL MET GLU LYS GLY SER
SEQRES 11 B 310 LEU LYS CYS ALA GLN TYR TRP PRO GLN LYS GLU GLU LYS
SEQRES 12 B 310 GLU MET ILE PHE GLU ASP THR ASN LEU LYS LEU THR LEU
SEQRES 13 B 310 ILE SER GLU ASP ILE LYS SER TYR TYR THR VAL ARG GLN
SEQRES 14 B 310 LEU GLU LEU GLU ASN LEU THR THR GLN GLU THR ARG GLU
SEQRES 15 B 310 ILE LEU HIS PHE HIS TYR THR THR TRP PRO ASP PHE GLY
SEQRES 16 B 310 VAL PRO GLU SER PRO ALA SER PHE LEU ASN PHE LEU PHE
SEQRES 17 B 310 LYS VAL ARG GLU SER GLY SER LEU SER PRO GLU HIS GLY
SEQRES 18 B 310 PRO VAL VAL VAL HIS CYS SER ALA GLY ILE GLY ARG SER
SEQRES 19 B 310 GLY THR PHE CYS LEU ALA ASP THR CYS LEU LEU LEU MET
SEQRES 20 B 310 ASP LYS ARG LYS ASP PRO SER SER VAL ASP ILE LYS LYS
SEQRES 21 B 310 VAL LEU LEU GLU MET ARG LYS PHE ARG MET GLY LEU ILE
SEQRES 22 B 310 GLN THR ALA ASP GLN LEU ARG PHE SER TYR LEU ALA VAL
SEQRES 23 B 310 ILE GLU GLY ALA LYS PHE ILE MET GLY ASP SER SER VAL
SEQRES 24 B 310 GLN ASP GLN TRP LYS GLU LEU SER HIS GLU ASP
HET CL A2011 1
HET MG A4000 1
HET 214 A 801 52
HET MPD A6000 8
HET CL B2012 1
HET CL B2013 1
HET MG B5000 1
HET 214 B1301 52
HETNAM CL CHLORIDE ION
HETNAM MG MAGNESIUM ION
HETNAM 214 6-[4-((2R)-2-(1H-1,2,3-BENZOTRIAZOL-1-YL)-3-{4-
HETNAM 2 214 [DIFLUORO(PHOSPHONO)METHYL]PHENYL}-2-PHENYLPROPYL)
HETNAM 3 214 PHENYL]-2-METHYLQUINOLIN-8-YLPHOSPHONIC ACID
HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL
FORMUL 3 CL 3(CL 1-)
FORMUL 4 MG 2(MG 2+)
FORMUL 5 214 2(C38 H32 F2 N4 O6 P2)
FORMUL 6 MPD C6 H14 O2
FORMUL 11 HOH *396(H2 O)
HELIX 1 1 GLU A 499 GLY A 514 1 16
HELIX 2 2 SER A 515 HIS A 525 1 11
HELIX 3 3 LEU A 537 ASN A 544 5 8
HELIX 4 4 THR A 591 GLN A 602 1 12
HELIX 5 5 SER A 687 SER A 701 1 15
HELIX 6 6 ILE A 719 ARG A 738 1 20
HELIX 7 7 ASP A 740 VAL A 744 5 5
HELIX 8 8 ASP A 745 ARG A 754 1 10
HELIX 9 9 THR A 763 GLY A 783 1 21
HELIX 10 10 GLU B 999 SER B 1013 1 15
HELIX 11 11 SER B 1015 ALA B 1027 1 13
HELIX 12 12 CYS B 1032 LEU B 1037 1 6
HELIX 13 13 PRO B 1038 ASN B 1044 5 7
HELIX 14 14 THR B 1091 GLN B 1102 1 12
HELIX 15 15 SER B 1187 SER B 1201 1 15
HELIX 16 16 ILE B 1219 ARG B 1238 1 20
HELIX 17 17 ASP B 1240 VAL B 1244 5 5
HELIX 18 18 ASP B 1245 ARG B 1254 1 10
HELIX 19 19 THR B 1263 GLY B 1283 1 21
SHEET 1 A 9 ARG A 556 LYS A 558 0
SHEET 2 A 9 TYR A 566 MET A 574 -1 O ALA A 569 N ILE A 557
SHEET 3 A 9 ARG A 579 THR A 584 -1 O TYR A 581 N ILE A 572
SHEET 4 A 9 VAL A 711 HIS A 714 1 O VAL A 713 N ILE A 582
SHEET 5 A 9 GLY A 606 MET A 609 1 N VAL A 608 O VAL A 712
SHEET 6 A 9 GLU A 667 TYR A 676 1 O PHE A 674 N MET A 609
SHEET 7 A 9 TYR A 653 ASN A 662 -1 N THR A 654 O HIS A 675
SHEET 8 A 9 LEU A 640 ILE A 649 -1 N ASP A 648 O VAL A 655
SHEET 9 A 9 MET A 633 PHE A 635 -1 N MET A 633 O LEU A 642
SHEET 1 B 9 ARG B1056 LYS B1058 0
SHEET 2 B 9 TYR B1066 MET B1074 -1 O ALA B1069 N ILE B1057
SHEET 3 B 9 ARG B1079 THR B1084 -1 O TYR B1081 N ILE B1072
SHEET 4 B 9 VAL B1211 HIS B1214 1 O VAL B1213 N ILE B1082
SHEET 5 B 9 GLY B1106 MET B1109 1 N VAL B1108 O VAL B1212
SHEET 6 B 9 GLU B1167 TYR B1176 1 O TYR B1176 N MET B1109
SHEET 7 B 9 TYR B1153 ASN B1162 -1 N ARG B1156 O HIS B1173
SHEET 8 B 9 LEU B1140 ILE B1149 -1 N ASP B1148 O VAL B1155
SHEET 9 B 9 MET B1133 PHE B1135 -1 N MET B1133 O LEU B1142
LINK MG MG A4000 O HOH A4001 1555 1555 2.10
LINK MG MG A4000 O HOH A4002 1555 1555 1.89
LINK MG MG A4000 O HOH A4003 1555 1555 1.90
LINK MG MG A4000 O HOH A4004 1555 1555 1.85
LINK MG MG A4000 O HOH A4005 1555 1555 2.33
LINK MG MG A4000 O HOH A4006 1555 1555 1.91
LINK O HOH B3185 MG MG B5000 4456 1555 2.74
LINK MG MG B5000 O HOH B5001 1555 1555 2.11
LINK MG MG B5000 O HOH B5002 1555 1555 2.88
LINK MG MG B5000 O HOH B5003 1555 1555 1.91
LINK MG MG B5000 O HOH B5004 1555 1555 2.45
LINK MG MG B5000 O HOH B5005 1555 1555 1.89
LINK MG MG B5000 O HOH B5006 1555 1555 2.05
SITE 1 AC1 2 ARG A 545 LEU A 619
SITE 1 AC2 2 ARG B1045 ALA B1122
SITE 1 AC3 3 HOH A3307 ARG B1047 214 B1301
SITE 1 AC4 6 HOH A4001 HOH A4002 HOH A4003 HOH A4004
SITE 2 AC4 6 HOH A4005 HOH A4006
SITE 1 AC5 8 HIS B1054 HOH B3185 HOH B5001 HOH B5002
SITE 2 AC5 8 HOH B5003 HOH B5004 HOH B5005 HOH B5006
SITE 1 AC6 27 ARG A 524 SER A 528 ASP A 529 TYR A 546
SITE 2 AC6 27 ARG A 547 ASP A 548 ASP A 681 PHE A 682
SITE 3 AC6 27 CYS A 715 SER A 716 ALA A 717 GLY A 718
SITE 4 AC6 27 ILE A 719 GLY A 720 ARG A 721 ARG A 754
SITE 5 AC6 27 MET A 758 GLN A 762 HOH A3005 HOH A3027
SITE 6 AC6 27 HOH A3031 HOH A3110 HOH A3194 HOH A3265
SITE 7 AC6 27 ALA B1018 GLN B1021 ASP B1022
SITE 1 AC7 30 ALA A 518 ASP A 522 HIS A 525 GLU A 526
SITE 2 AC7 30 ARG B1024 SER B1028 ASP B1029 TYR B1046
SITE 3 AC7 30 ARG B1047 ASP B1048 LEU B1119 PHE B1182
SITE 4 AC7 30 CYS B1215 SER B1216 ALA B1217 GLY B1218
SITE 5 AC7 30 ILE B1219 GLY B1220 ARG B1221 ARG B1254
SITE 6 AC7 30 MET B1258 GLY B1259 GLN B1262 CL B2013
SITE 7 AC7 30 HOH B3033 HOH B3036 HOH B3058 HOH B3064
SITE 8 AC7 30 HOH B3073 HOH B3120
SITE 1 AC8 6 ARG A 524 HOH A3097 HOH A3103 ALA B1017
SITE 2 AC8 6 TYR B1020 ARG B1024
CRYST1 87.858 87.761 138.118 90.00 90.00 90.00 P 21 21 21 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.011382 0.000000 0.000000 0.00000
SCALE2 0.000000 0.011395 0.000000 0.00000
SCALE3 0.000000 0.000000 0.007240 0.00000