HEADER HYDROLASE 13-AUG-03 1Q6S TITLE THE STRUCTURE OF PHOSPHOTYROSINE PHOSPHATASE 1B IN COMPLEX WITH TITLE 2 COMPOUND 9 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN-TYROSINE PHOSPHATASE, NON-RECEPTOR TYPE 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CATALYTIC DOMAIN; COMPND 5 SYNONYM: PROTEIN-TYROSINE PHOSPHATASE 1B, PTP-1B; COMPND 6 EC: 3.1.3.48; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PTPN1 OR PTP1B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PFLAG-2 KEYWDS PHOSPHATASE, SECONDARY BINDING SITE, SELECTIVITY, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR G.SCAPIN,S.B.PATEL,J.W.BECKER,Q.WANG,C.DESPONTS,D.WADDLETON,K.SKOREY, AUTHOR 2 W.CROMLISH,C.BAYLY,M.THERIEN,J.Y.GAUTHIER,C.S.LI,C.K.LAU, AUTHOR 3 C.RAMACHANDRAN,B.P.KENNEDY,E.ASANTE-APPIAH REVDAT 5 16-AUG-23 1Q6S 1 REMARK SEQADV LINK REVDAT 4 11-OCT-17 1Q6S 1 REMARK REVDAT 3 24-FEB-09 1Q6S 1 VERSN REVDAT 2 14-OCT-03 1Q6S 1 JRNL REVDAT 1 30-SEP-03 1Q6S 0 JRNL AUTH G.SCAPIN,S.B.PATEL,J.W.BECKER,Q.WANG,C.DESPONTS,D.WADDLETON, JRNL AUTH 2 K.SKOREY,W.CROMLISH,C.BAYLY,M.THERIEN,J.Y.GAUTHIER,C.S.LI, JRNL AUTH 3 C.K.LAU,C.RAMACHANDRAN,B.P.KENNEDY,E.ASANTE-APPIAH JRNL TITL THE STRUCTURAL BASIS FOR THE SELECTIVITY OF BENZOTRIAZOLE JRNL TITL 2 INHIBITORS OF PTP1B JRNL REF BIOCHEMISTRY V. 42 11451 2003 JRNL REFN ISSN 0006-2960 JRNL PMID 14516196 JRNL DOI 10.1021/BI035098J REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNX REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN,ACCELRYS REMARK 3 : SOFTWARE INC.(BADGER,BERARD,KUMAR,SZALMA, REMARK 3 : YIP,DZAKULA) REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 53236 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3814 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 54824 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.30 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.50 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4723 REMARK 3 BIN R VALUE (WORKING SET) : 0.2260 REMARK 3 BIN FREE R VALUE : 0.2930 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 6.70 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 358 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4698 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 117 REMARK 3 SOLVENT ATOMS : 396 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.88700 REMARK 3 B22 (A**2) : 1.68100 REMARK 3 B33 (A**2) : -6.56800 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.24 REMARK 3 ESD FROM SIGMAA (A) : 0.18 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.29 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.22 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.380 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.49 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.890 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.110 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.460 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.920 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.200 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : MASK REMARK 3 KSOL : 0.41 REMARK 3 BSOL : 42.10 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1Q6S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-AUG-03. REMARK 100 THE DEPOSITION ID IS D_1000019987. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-AUG-99 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : X-GEN REMARK 200 DATA SCALING SOFTWARE : X-GEN REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54806 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06200 REMARK 200 FOR THE DATA SET : 11.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.21200 REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: CNX REMARK 200 STARTING MODEL: PDB ENTRY 1Q6P REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, MGCL2, HEPES, PH 7.00, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 43.92900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.05900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.88050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 69.05900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.92900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.88050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 489 REMARK 465 ASP A 490 REMARK 465 TYR A 491 REMARK 465 LYS A 492 REMARK 465 ASP A 493 REMARK 465 ASP A 494 REMARK 465 ASP A 495 REMARK 465 ASP A 496 REMARK 465 SER A 786 REMARK 465 VAL A 787 REMARK 465 GLN A 788 REMARK 465 ASP A 789 REMARK 465 GLN A 790 REMARK 465 TRP A 791 REMARK 465 LYS A 792 REMARK 465 GLU A 793 REMARK 465 LEU A 794 REMARK 465 SER A 795 REMARK 465 HIS A 796 REMARK 465 GLU A 797 REMARK 465 ASP A 798 REMARK 465 MET B 989 REMARK 465 ASP B 990 REMARK 465 TYR B 991 REMARK 465 LYS B 992 REMARK 465 ASP B 993 REMARK 465 ASP B 994 REMARK 465 ASP B 995 REMARK 465 ASP B 996 REMARK 465 SER B 1286 REMARK 465 VAL B 1287 REMARK 465 GLN B 1288 REMARK 465 ASP B 1289 REMARK 465 GLN B 1290 REMARK 465 TRP B 1291 REMARK 465 LYS B 1292 REMARK 465 GLU B 1293 REMARK 465 LEU B 1294 REMARK 465 SER B 1295 REMARK 465 HIS B 1296 REMARK 465 GLU B 1297 REMARK 465 ASP B 1298 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 497 CG CD CE NZ REMARK 470 LEU A 498 CG CD1 CD2 REMARK 470 MET A 501 CG SD CE REMARK 470 LYS B 997 CG CD CE NZ REMARK 470 LEU B 998 CG CD1 CD2 REMARK 470 MET B1001 CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 498 21.49 -71.76 REMARK 500 HIS A 560 26.31 -78.32 REMARK 500 ASN A 611 -165.55 -117.25 REMARK 500 LYS A 620 -9.70 62.40 REMARK 500 CYS A 621 134.90 -174.77 REMARK 500 LYS A 631 70.00 -116.35 REMARK 500 CYS A 715 -130.29 -138.12 REMARK 500 ILE A 719 -43.50 -136.02 REMARK 500 ILE A 761 112.48 77.93 REMARK 500 LEU B 998 36.14 -79.15 REMARK 500 ASP B1063 -86.23 -57.79 REMARK 500 ASN B1111 -167.83 -111.62 REMARK 500 SER B1118 -71.59 -78.35 REMARK 500 LEU B1119 74.35 -61.00 REMARK 500 CYS B1121 134.04 -173.22 REMARK 500 CYS B1215 -131.68 -136.91 REMARK 500 ILE B1219 -40.93 -136.64 REMARK 500 ILE B1261 113.78 76.72 REMARK 500 ILE B1281 -75.96 -61.67 REMARK 500 ASP B1284 136.65 174.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A4000 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A4001 O REMARK 620 2 HOH A4002 O 108.7 REMARK 620 3 HOH A4003 O 91.5 107.3 REMARK 620 4 HOH A4004 O 87.6 90.3 161.7 REMARK 620 5 HOH A4005 O 78.8 163.6 86.7 75.1 REMARK 620 6 HOH A4006 O 165.5 85.3 88.0 88.5 86.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B5000 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B3185 O REMARK 620 2 HOH B5001 O 59.8 REMARK 620 3 HOH B5002 O 115.7 56.5 REMARK 620 4 HOH B5003 O 116.3 106.4 88.9 REMARK 620 5 HOH B5004 O 76.4 64.5 70.6 159.3 REMARK 620 6 HOH B5005 O 69.9 119.6 140.4 125.3 73.4 REMARK 620 7 HOH B5006 O 148.0 109.9 58.4 95.5 72.2 95.2 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 2011 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 2012 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 2013 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 4000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 5000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 214 A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 214 B 1301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 6000 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1Q6J RELATED DB: PDB REMARK 900 SAME PROTEIN IN COMPLEX WITH [4-(2-(1H-1,2,3-BENZOTRIAZOL-1-YL)-3-{ REMARK 900 4-[DIFLUORO(PHOSPHONO)METHYL]PHENYL}-2-PHENYLPROPYL)PHENYL] REMARK 900 (DIFLUORO)METHYLPHOSPHONIC ACID REMARK 900 RELATED ID: 1Q6M RELATED DB: PDB REMARK 900 SAME PROTEIN IN COMPLEX WITH {[2-(1H-1,2,3-BENZOTRIAZOL-1-YL)-2-(3, REMARK 900 4-DIFLUOROPHENYL)PROPANE-1,3-DIYL]BIS[4,1- REMARK 900 PHENYLENE(DIFLUOROMETHYLENE)]}BISPHOSPHONIC ACID REMARK 900 RELATED ID: 1Q6N RELATED DB: PDB REMARK 900 SAME PROTEIN IN COMPLEX WITH {4-[(2S,4E)-2-(1,3-BENZOTHIAZOL-2-YL)- REMARK 900 2-(1H-1,2,3-BENZOTRIAZOL-1-YL)-5-PHENYLPENT-4-ENYL]PHENYL}(DIFLUORO) REMARK 900 METHYLPHOSPHONIC ACID REMARK 900 RELATED ID: 1Q6P RELATED DB: PDB REMARK 900 SAME PROTEIN IN COMPLEX WITH [{4-[(4E)-2-(1,3-BENZOTHIAZOL-2-YL)-2- REMARK 900 (1H-1,2,3-BENZOTRIAZOL-1-YL)-5-PHENYLPENT-4-EN-1-YL]PHENYL} REMARK 900 (DIFLUORO)METHYL]PHOSPHONIC ACID REMARK 900 RELATED ID: 1Q6T RELATED DB: PDB REMARK 900 SAME PROTEIN IN COMPLEX WITH [6-[4-(2-(1H-1,2,3-BENZOTRIAZOL-1-YL)- REMARK 900 3-{4-[DIFLUORO(PHOSPHONO)METHYL]PHENYL}-2-PHENYLPROPYL)PHENYL]-2-(1- REMARK 900 METHOXY-3-METHYLBUTYL)QUINOLIN-8-YL]PHOSPHONIC ACID DBREF 1Q6S A 501 798 UNP P18031 PTN1_HUMAN 1 298 DBREF 1Q6S B 1001 1298 UNP P18031 PTN1_HUMAN 1 298 SEQADV 1Q6S MET A 489 UNP P18031 CLONING ARTIFACT SEQADV 1Q6S ASP A 490 UNP P18031 CLONING ARTIFACT SEQADV 1Q6S TYR A 491 UNP P18031 CLONING ARTIFACT SEQADV 1Q6S LYS A 492 UNP P18031 CLONING ARTIFACT SEQADV 1Q6S ASP A 493 UNP P18031 CLONING ARTIFACT SEQADV 1Q6S ASP A 494 UNP P18031 CLONING ARTIFACT SEQADV 1Q6S ASP A 495 UNP P18031 CLONING ARTIFACT SEQADV 1Q6S ASP A 496 UNP P18031 CLONING ARTIFACT SEQADV 1Q6S LYS A 497 UNP P18031 CLONING ARTIFACT SEQADV 1Q6S LEU A 498 UNP P18031 CLONING ARTIFACT SEQADV 1Q6S GLU A 499 UNP P18031 CLONING ARTIFACT SEQADV 1Q6S PHE A 500 UNP P18031 CLONING ARTIFACT SEQADV 1Q6S MET B 989 UNP P18031 CLONING ARTIFACT SEQADV 1Q6S ASP B 990 UNP P18031 CLONING ARTIFACT SEQADV 1Q6S TYR B 991 UNP P18031 CLONING ARTIFACT SEQADV 1Q6S LYS B 992 UNP P18031 CLONING ARTIFACT SEQADV 1Q6S ASP B 993 UNP P18031 CLONING ARTIFACT SEQADV 1Q6S ASP B 994 UNP P18031 CLONING ARTIFACT SEQADV 1Q6S ASP B 995 UNP P18031 CLONING ARTIFACT SEQADV 1Q6S ASP B 996 UNP P18031 CLONING ARTIFACT SEQADV 1Q6S LYS B 997 UNP P18031 CLONING ARTIFACT SEQADV 1Q6S LEU B 998 UNP P18031 CLONING ARTIFACT SEQADV 1Q6S GLU B 999 UNP P18031 CLONING ARTIFACT SEQADV 1Q6S PHE B 1000 UNP P18031 CLONING ARTIFACT SEQRES 1 A 310 MET ASP TYR LYS ASP ASP ASP ASP LYS LEU GLU PHE MET SEQRES 2 A 310 GLU MET GLU LYS GLU PHE GLU GLN ILE ASP LYS SER GLY SEQRES 3 A 310 SER TRP ALA ALA ILE TYR GLN ASP ILE ARG HIS GLU ALA SEQRES 4 A 310 SER ASP PHE PRO CYS ARG VAL ALA LYS LEU PRO LYS ASN SEQRES 5 A 310 LYS ASN ARG ASN ARG TYR ARG ASP VAL SER PRO PHE ASP SEQRES 6 A 310 HIS SER ARG ILE LYS LEU HIS GLN GLU ASP ASN ASP TYR SEQRES 7 A 310 ILE ASN ALA SER LEU ILE LYS MET GLU GLU ALA GLN ARG SEQRES 8 A 310 SER TYR ILE LEU THR GLN GLY PRO LEU PRO ASN THR CYS SEQRES 9 A 310 GLY HIS PHE TRP GLU MET VAL TRP GLU GLN LYS SER ARG SEQRES 10 A 310 GLY VAL VAL MET LEU ASN ARG VAL MET GLU LYS GLY SER SEQRES 11 A 310 LEU LYS CYS ALA GLN TYR TRP PRO GLN LYS GLU GLU LYS SEQRES 12 A 310 GLU MET ILE PHE GLU ASP THR ASN LEU LYS LEU THR LEU SEQRES 13 A 310 ILE SER GLU ASP ILE LYS SER TYR TYR THR VAL ARG GLN SEQRES 14 A 310 LEU GLU LEU GLU ASN LEU THR THR GLN GLU THR ARG GLU SEQRES 15 A 310 ILE LEU HIS PHE HIS TYR THR THR TRP PRO ASP PHE GLY SEQRES 16 A 310 VAL PRO GLU SER PRO ALA SER PHE LEU ASN PHE LEU PHE SEQRES 17 A 310 LYS VAL ARG GLU SER GLY SER LEU SER PRO GLU HIS GLY SEQRES 18 A 310 PRO VAL VAL VAL HIS CYS SER ALA GLY ILE GLY ARG SER SEQRES 19 A 310 GLY THR PHE CYS LEU ALA ASP THR CYS LEU LEU LEU MET SEQRES 20 A 310 ASP LYS ARG LYS ASP PRO SER SER VAL ASP ILE LYS LYS SEQRES 21 A 310 VAL LEU LEU GLU MET ARG LYS PHE ARG MET GLY LEU ILE SEQRES 22 A 310 GLN THR ALA ASP GLN LEU ARG PHE SER TYR LEU ALA VAL SEQRES 23 A 310 ILE GLU GLY ALA LYS PHE ILE MET GLY ASP SER SER VAL SEQRES 24 A 310 GLN ASP GLN TRP LYS GLU LEU SER HIS GLU ASP SEQRES 1 B 310 MET ASP TYR LYS ASP ASP ASP ASP LYS LEU GLU PHE MET SEQRES 2 B 310 GLU MET GLU LYS GLU PHE GLU GLN ILE ASP LYS SER GLY SEQRES 3 B 310 SER TRP ALA ALA ILE TYR GLN ASP ILE ARG HIS GLU ALA SEQRES 4 B 310 SER ASP PHE PRO CYS ARG VAL ALA LYS LEU PRO LYS ASN SEQRES 5 B 310 LYS ASN ARG ASN ARG TYR ARG ASP VAL SER PRO PHE ASP SEQRES 6 B 310 HIS SER ARG ILE LYS LEU HIS GLN GLU ASP ASN ASP TYR SEQRES 7 B 310 ILE ASN ALA SER LEU ILE LYS MET GLU GLU ALA GLN ARG SEQRES 8 B 310 SER TYR ILE LEU THR GLN GLY PRO LEU PRO ASN THR CYS SEQRES 9 B 310 GLY HIS PHE TRP GLU MET VAL TRP GLU GLN LYS SER ARG SEQRES 10 B 310 GLY VAL VAL MET LEU ASN ARG VAL MET GLU LYS GLY SER SEQRES 11 B 310 LEU LYS CYS ALA GLN TYR TRP PRO GLN LYS GLU GLU LYS SEQRES 12 B 310 GLU MET ILE PHE GLU ASP THR ASN LEU LYS LEU THR LEU SEQRES 13 B 310 ILE SER GLU ASP ILE LYS SER TYR TYR THR VAL ARG GLN SEQRES 14 B 310 LEU GLU LEU GLU ASN LEU THR THR GLN GLU THR ARG GLU SEQRES 15 B 310 ILE LEU HIS PHE HIS TYR THR THR TRP PRO ASP PHE GLY SEQRES 16 B 310 VAL PRO GLU SER PRO ALA SER PHE LEU ASN PHE LEU PHE SEQRES 17 B 310 LYS VAL ARG GLU SER GLY SER LEU SER PRO GLU HIS GLY SEQRES 18 B 310 PRO VAL VAL VAL HIS CYS SER ALA GLY ILE GLY ARG SER SEQRES 19 B 310 GLY THR PHE CYS LEU ALA ASP THR CYS LEU LEU LEU MET SEQRES 20 B 310 ASP LYS ARG LYS ASP PRO SER SER VAL ASP ILE LYS LYS SEQRES 21 B 310 VAL LEU LEU GLU MET ARG LYS PHE ARG MET GLY LEU ILE SEQRES 22 B 310 GLN THR ALA ASP GLN LEU ARG PHE SER TYR LEU ALA VAL SEQRES 23 B 310 ILE GLU GLY ALA LYS PHE ILE MET GLY ASP SER SER VAL SEQRES 24 B 310 GLN ASP GLN TRP LYS GLU LEU SER HIS GLU ASP HET CL A2011 1 HET MG A4000 1 HET 214 A 801 52 HET MPD A6000 8 HET CL B2012 1 HET CL B2013 1 HET MG B5000 1 HET 214 B1301 52 HETNAM CL CHLORIDE ION HETNAM MG MAGNESIUM ION HETNAM 214 6-[4-((2R)-2-(1H-1,2,3-BENZOTRIAZOL-1-YL)-3-{4- HETNAM 2 214 [DIFLUORO(PHOSPHONO)METHYL]PHENYL}-2-PHENYLPROPYL) HETNAM 3 214 PHENYL]-2-METHYLQUINOLIN-8-YLPHOSPHONIC ACID HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL FORMUL 3 CL 3(CL 1-) FORMUL 4 MG 2(MG 2+) FORMUL 5 214 2(C38 H32 F2 N4 O6 P2) FORMUL 6 MPD C6 H14 O2 FORMUL 11 HOH *396(H2 O) HELIX 1 1 GLU A 499 GLY A 514 1 16 HELIX 2 2 SER A 515 HIS A 525 1 11 HELIX 3 3 LEU A 537 ASN A 544 5 8 HELIX 4 4 THR A 591 GLN A 602 1 12 HELIX 5 5 SER A 687 SER A 701 1 15 HELIX 6 6 ILE A 719 ARG A 738 1 20 HELIX 7 7 ASP A 740 VAL A 744 5 5 HELIX 8 8 ASP A 745 ARG A 754 1 10 HELIX 9 9 THR A 763 GLY A 783 1 21 HELIX 10 10 GLU B 999 SER B 1013 1 15 HELIX 11 11 SER B 1015 ALA B 1027 1 13 HELIX 12 12 CYS B 1032 LEU B 1037 1 6 HELIX 13 13 PRO B 1038 ASN B 1044 5 7 HELIX 14 14 THR B 1091 GLN B 1102 1 12 HELIX 15 15 SER B 1187 SER B 1201 1 15 HELIX 16 16 ILE B 1219 ARG B 1238 1 20 HELIX 17 17 ASP B 1240 VAL B 1244 5 5 HELIX 18 18 ASP B 1245 ARG B 1254 1 10 HELIX 19 19 THR B 1263 GLY B 1283 1 21 SHEET 1 A 9 ARG A 556 LYS A 558 0 SHEET 2 A 9 TYR A 566 MET A 574 -1 O ALA A 569 N ILE A 557 SHEET 3 A 9 ARG A 579 THR A 584 -1 O TYR A 581 N ILE A 572 SHEET 4 A 9 VAL A 711 HIS A 714 1 O VAL A 713 N ILE A 582 SHEET 5 A 9 GLY A 606 MET A 609 1 N VAL A 608 O VAL A 712 SHEET 6 A 9 GLU A 667 TYR A 676 1 O PHE A 674 N MET A 609 SHEET 7 A 9 TYR A 653 ASN A 662 -1 N THR A 654 O HIS A 675 SHEET 8 A 9 LEU A 640 ILE A 649 -1 N ASP A 648 O VAL A 655 SHEET 9 A 9 MET A 633 PHE A 635 -1 N MET A 633 O LEU A 642 SHEET 1 B 9 ARG B1056 LYS B1058 0 SHEET 2 B 9 TYR B1066 MET B1074 -1 O ALA B1069 N ILE B1057 SHEET 3 B 9 ARG B1079 THR B1084 -1 O TYR B1081 N ILE B1072 SHEET 4 B 9 VAL B1211 HIS B1214 1 O VAL B1213 N ILE B1082 SHEET 5 B 9 GLY B1106 MET B1109 1 N VAL B1108 O VAL B1212 SHEET 6 B 9 GLU B1167 TYR B1176 1 O TYR B1176 N MET B1109 SHEET 7 B 9 TYR B1153 ASN B1162 -1 N ARG B1156 O HIS B1173 SHEET 8 B 9 LEU B1140 ILE B1149 -1 N ASP B1148 O VAL B1155 SHEET 9 B 9 MET B1133 PHE B1135 -1 N MET B1133 O LEU B1142 LINK MG MG A4000 O HOH A4001 1555 1555 2.10 LINK MG MG A4000 O HOH A4002 1555 1555 1.89 LINK MG MG A4000 O HOH A4003 1555 1555 1.90 LINK MG MG A4000 O HOH A4004 1555 1555 1.85 LINK MG MG A4000 O HOH A4005 1555 1555 2.33 LINK MG MG A4000 O HOH A4006 1555 1555 1.91 LINK O HOH B3185 MG MG B5000 4456 1555 2.74 LINK MG MG B5000 O HOH B5001 1555 1555 2.11 LINK MG MG B5000 O HOH B5002 1555 1555 2.88 LINK MG MG B5000 O HOH B5003 1555 1555 1.91 LINK MG MG B5000 O HOH B5004 1555 1555 2.45 LINK MG MG B5000 O HOH B5005 1555 1555 1.89 LINK MG MG B5000 O HOH B5006 1555 1555 2.05 SITE 1 AC1 2 ARG A 545 LEU A 619 SITE 1 AC2 2 ARG B1045 ALA B1122 SITE 1 AC3 3 HOH A3307 ARG B1047 214 B1301 SITE 1 AC4 6 HOH A4001 HOH A4002 HOH A4003 HOH A4004 SITE 2 AC4 6 HOH A4005 HOH A4006 SITE 1 AC5 8 HIS B1054 HOH B3185 HOH B5001 HOH B5002 SITE 2 AC5 8 HOH B5003 HOH B5004 HOH B5005 HOH B5006 SITE 1 AC6 27 ARG A 524 SER A 528 ASP A 529 TYR A 546 SITE 2 AC6 27 ARG A 547 ASP A 548 ASP A 681 PHE A 682 SITE 3 AC6 27 CYS A 715 SER A 716 ALA A 717 GLY A 718 SITE 4 AC6 27 ILE A 719 GLY A 720 ARG A 721 ARG A 754 SITE 5 AC6 27 MET A 758 GLN A 762 HOH A3005 HOH A3027 SITE 6 AC6 27 HOH A3031 HOH A3110 HOH A3194 HOH A3265 SITE 7 AC6 27 ALA B1018 GLN B1021 ASP B1022 SITE 1 AC7 30 ALA A 518 ASP A 522 HIS A 525 GLU A 526 SITE 2 AC7 30 ARG B1024 SER B1028 ASP B1029 TYR B1046 SITE 3 AC7 30 ARG B1047 ASP B1048 LEU B1119 PHE B1182 SITE 4 AC7 30 CYS B1215 SER B1216 ALA B1217 GLY B1218 SITE 5 AC7 30 ILE B1219 GLY B1220 ARG B1221 ARG B1254 SITE 6 AC7 30 MET B1258 GLY B1259 GLN B1262 CL B2013 SITE 7 AC7 30 HOH B3033 HOH B3036 HOH B3058 HOH B3064 SITE 8 AC7 30 HOH B3073 HOH B3120 SITE 1 AC8 6 ARG A 524 HOH A3097 HOH A3103 ALA B1017 SITE 2 AC8 6 TYR B1020 ARG B1024 CRYST1 87.858 87.761 138.118 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011382 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011395 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007240 0.00000