data_1Q91 # _entry.id 1Q91 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1Q91 pdb_00001q91 10.2210/pdb1q91/pdb RCSB RCSB020068 ? ? WWPDB D_1000020068 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1MH9 . unspecified PDB 1Q92 'The same protein complexed with the inhibitor PMcP-U' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1Q91 _pdbx_database_status.recvd_initial_deposition_date 2003-08-22 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Rinaldo-Matthis, A.' 1 'Rampazzo, C.' 2 'Balzarini, J.' 3 'Reichard, P.' 4 'Bianchi, V.' 5 'Nordlund, P.' 6 # _citation.id primary _citation.title 'Crystal structures of the mitochondrial deoxyribonucleotidase in complex with two specific inhibitors' _citation.journal_abbrev Mol.Pharmacol. _citation.journal_volume 65 _citation.page_first 860 _citation.page_last 867 _citation.year 2004 _citation.journal_id_ASTM MOPMA3 _citation.country US _citation.journal_id_ISSN 0026-895X _citation.journal_id_CSD 0197 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15044615 _citation.pdbx_database_id_DOI 10.1124/mol.65.4.860 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Rinaldo-Matthis, A.' 1 ? primary 'Rampazzo, C.' 2 ? primary 'Balzarini, J.' 3 ? primary 'Reichard, P.' 4 ? primary 'Bianchi, V.' 5 ? primary 'Nordlund, P.' 6 ? # _cell.entry_id 1Q91 _cell.length_a 73.651 _cell.length_b 73.651 _cell.length_c 106.830 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1Q91 _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '5(3)-deoxyribonucleotidase' 22841.119 1 3.1.3.5 ? ? ? 2 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 non-polymer syn "(S)-1-[2'-DEOXY-3',5'-O-(1-PHOSPHONO)BENZYLIDENE-B-D-THREO-PENTOFURANOSYL]THYMINE" 410.315 1 ? ? ? ? 5 water nat water 18.015 328 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name deoxyribonucleotidase # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GGRALRVLVDMDGVLADFEGGFLRKFRARFPDQPFIALEDRRGFWVSEQYGRLRPGLSEKAISIWESKNFFFELEPLPGA VEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFLEQIVLTRDKTVVSADLLIDDRPDITGAEPTPSWEH VLFTACHNQHLQLQPPRRRLHSWADDWKAILDSKRPC ; _entity_poly.pdbx_seq_one_letter_code_can ;GGRALRVLVDMDGVLADFEGGFLRKFRARFPDQPFIALEDRRGFWVSEQYGRLRPGLSEKAISIWESKNFFFELEPLPGA VEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFLEQIVLTRDKTVVSADLLIDDRPDITGAEPTPSWEH VLFTACHNQHLQLQPPRRRLHSWADDWKAILDSKRPC ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 GLY n 1 3 ARG n 1 4 ALA n 1 5 LEU n 1 6 ARG n 1 7 VAL n 1 8 LEU n 1 9 VAL n 1 10 ASP n 1 11 MET n 1 12 ASP n 1 13 GLY n 1 14 VAL n 1 15 LEU n 1 16 ALA n 1 17 ASP n 1 18 PHE n 1 19 GLU n 1 20 GLY n 1 21 GLY n 1 22 PHE n 1 23 LEU n 1 24 ARG n 1 25 LYS n 1 26 PHE n 1 27 ARG n 1 28 ALA n 1 29 ARG n 1 30 PHE n 1 31 PRO n 1 32 ASP n 1 33 GLN n 1 34 PRO n 1 35 PHE n 1 36 ILE n 1 37 ALA n 1 38 LEU n 1 39 GLU n 1 40 ASP n 1 41 ARG n 1 42 ARG n 1 43 GLY n 1 44 PHE n 1 45 TRP n 1 46 VAL n 1 47 SER n 1 48 GLU n 1 49 GLN n 1 50 TYR n 1 51 GLY n 1 52 ARG n 1 53 LEU n 1 54 ARG n 1 55 PRO n 1 56 GLY n 1 57 LEU n 1 58 SER n 1 59 GLU n 1 60 LYS n 1 61 ALA n 1 62 ILE n 1 63 SER n 1 64 ILE n 1 65 TRP n 1 66 GLU n 1 67 SER n 1 68 LYS n 1 69 ASN n 1 70 PHE n 1 71 PHE n 1 72 PHE n 1 73 GLU n 1 74 LEU n 1 75 GLU n 1 76 PRO n 1 77 LEU n 1 78 PRO n 1 79 GLY n 1 80 ALA n 1 81 VAL n 1 82 GLU n 1 83 ALA n 1 84 VAL n 1 85 LYS n 1 86 GLU n 1 87 MET n 1 88 ALA n 1 89 SER n 1 90 LEU n 1 91 GLN n 1 92 ASN n 1 93 THR n 1 94 ASP n 1 95 VAL n 1 96 PHE n 1 97 ILE n 1 98 CYS n 1 99 THR n 1 100 SER n 1 101 PRO n 1 102 ILE n 1 103 LYS n 1 104 MET n 1 105 PHE n 1 106 LYS n 1 107 TYR n 1 108 CYS n 1 109 PRO n 1 110 TYR n 1 111 GLU n 1 112 LYS n 1 113 TYR n 1 114 ALA n 1 115 TRP n 1 116 VAL n 1 117 GLU n 1 118 LYS n 1 119 TYR n 1 120 PHE n 1 121 GLY n 1 122 PRO n 1 123 ASP n 1 124 PHE n 1 125 LEU n 1 126 GLU n 1 127 GLN n 1 128 ILE n 1 129 VAL n 1 130 LEU n 1 131 THR n 1 132 ARG n 1 133 ASP n 1 134 LYS n 1 135 THR n 1 136 VAL n 1 137 VAL n 1 138 SER n 1 139 ALA n 1 140 ASP n 1 141 LEU n 1 142 LEU n 1 143 ILE n 1 144 ASP n 1 145 ASP n 1 146 ARG n 1 147 PRO n 1 148 ASP n 1 149 ILE n 1 150 THR n 1 151 GLY n 1 152 ALA n 1 153 GLU n 1 154 PRO n 1 155 THR n 1 156 PRO n 1 157 SER n 1 158 TRP n 1 159 GLU n 1 160 HIS n 1 161 VAL n 1 162 LEU n 1 163 PHE n 1 164 THR n 1 165 ALA n 1 166 CYS n 1 167 HIS n 1 168 ASN n 1 169 GLN n 1 170 HIS n 1 171 LEU n 1 172 GLN n 1 173 LEU n 1 174 GLN n 1 175 PRO n 1 176 PRO n 1 177 ARG n 1 178 ARG n 1 179 ARG n 1 180 LEU n 1 181 HIS n 1 182 SER n 1 183 TRP n 1 184 ALA n 1 185 ASP n 1 186 ASP n 1 187 TRP n 1 188 LYS n 1 189 ALA n 1 190 ILE n 1 191 LEU n 1 192 ASP n 1 193 SER n 1 194 LYS n 1 195 ARG n 1 196 PRO n 1 197 CYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NT5M_HUMAN _struct_ref.pdbx_db_accession Q9NPB1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GGRALRVLVDMDGVLADFEGGFLRKFRARFPDQPFIALEDRRGFWVSEQYGRLRPGLSEKAISIWESKNFFFELEPLPGA VEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFLEQIVLTRDKTVVSADLLIDDRPDITGAEPTPSWEH VLFTACHNQHLQLQPPRRRLHSWADDWKAILDSKRPC ; _struct_ref.pdbx_align_begin 32 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1Q91 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 197 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9NPB1 _struct_ref_seq.db_align_beg 32 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 228 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 32 _struct_ref_seq.pdbx_auth_seq_align_end 228 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DPB 'DNA linking' n "(S)-1-[2'-DEOXY-3',5'-O-(1-PHOSPHONO)BENZYLIDENE-B-D-THREO-PENTOFURANOSYL]THYMINE" DPB-T 'C17 H19 N2 O8 P' 410.315 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1Q91 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.64 _exptl_crystal.density_percent_sol 53.04 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.3 _exptl_crystal_grow.pdbx_details 'PEG 8000, potassium phosphate, pH 5.3, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2002-01-30 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9393 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-4' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-4 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9393 # _reflns.entry_id 1Q91 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low ? _reflns.d_resolution_high ? _reflns.number_obs ? _reflns.number_all ? _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 21.0 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 1Q91 _refine.ls_number_reflns_obs 38484 _refine.ls_number_reflns_all 38484 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 239741.81 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.77 _refine.ls_d_res_high 1.60 _refine.ls_percent_reflns_obs 97.7 _refine.ls_R_factor_obs 0.186 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.186 _refine.ls_R_factor_R_free 0.206 _refine.ls_R_factor_R_free_error 0.003 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.0 _refine.ls_number_reflns_R_free 3859 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 26.0 _refine.aniso_B[1][1] -1.62 _refine.aniso_B[2][2] -1.62 _refine.aniso_B[3][3] 3.25 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.352748 _refine.solvent_model_param_bsol 46.0293 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'pdb code 1MH9' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1Q91 _refine_analyze.Luzzati_coordinate_error_obs 0.15 _refine_analyze.Luzzati_sigma_a_obs 0.10 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.19 _refine_analyze.Luzzati_sigma_a_free 0.12 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1598 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.number_atoms_solvent 328 _refine_hist.number_atoms_total 1960 _refine_hist.d_res_high 1.60 _refine_hist.d_res_low 19.77 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.026 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 2.2 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 23.9 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.48 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 3.04 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 3.77 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 26.96 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 14.32 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.60 _refine_ls_shell.d_res_low 1.70 _refine_ls_shell.number_reflns_R_work 5237 _refine_ls_shell.R_factor_R_work 0.208 _refine_ls_shell.percent_reflns_obs 91.2 _refine_ls_shell.R_factor_R_free 0.238 _refine_ls_shell.R_factor_R_free_error 0.010 _refine_ls_shell.percent_reflns_R_free 10.7 _refine_ls_shell.number_reflns_R_free ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 DPB_PAR.TXT WATER.TOP 'X-RAY DIFFRACTION' 3 ION.PARAM ? 'X-RAY DIFFRACTION' 4 WATER_REP.PARAM DPB_TOP.TXT 'X-RAY DIFFRACTION' 5 ? ION.TOP 'X-RAY DIFFRACTION' # _struct.entry_id 1Q91 _struct.title 'Crystal structure of human mitochondrial deoxyribonucleotidase in complex with the inhibitor DPB-T' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1Q91 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'alpha-beta-Rossman fold, hydrolase' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 17 ? PHE A 30 ? ASP A 48 PHE A 61 1 ? 14 HELX_P HELX_P2 2 ALA A 37 ? ARG A 41 ? ALA A 68 ARG A 72 5 ? 5 HELX_P HELX_P3 3 TRP A 45 ? ARG A 54 ? TRP A 76 ARG A 85 1 ? 10 HELX_P HELX_P4 4 GLY A 56 ? GLU A 66 ? GLY A 87 GLU A 97 1 ? 11 HELX_P HELX_P5 5 GLY A 79 ? LEU A 90 ? GLY A 110 LEU A 121 1 ? 12 HELX_P HELX_P6 6 TYR A 107 ? GLY A 121 ? TYR A 138 GLY A 152 1 ? 15 HELX_P HELX_P7 7 PRO A 122 ? GLU A 126 ? PRO A 153 GLU A 157 5 ? 5 HELX_P HELX_P8 8 ASP A 133 ? VAL A 137 ? ASP A 164 VAL A 168 5 ? 5 HELX_P HELX_P9 9 ASP A 186 ? SER A 193 ? ASP A 217 SER A 224 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASP 10 OD2 ? ? ? 1_555 C MG . MG ? ? A ASP 41 A MG 1003 1_555 ? ? ? ? ? ? ? 2.126 ? ? metalc2 metalc ? ? A ASP 12 O ? ? ? 1_555 C MG . MG ? ? A ASP 43 A MG 1003 1_555 ? ? ? ? ? ? ? 2.119 ? ? metalc3 metalc ? ? A ASP 145 OD1 ? ? ? 1_555 C MG . MG ? ? A ASP 176 A MG 1003 1_555 ? ? ? ? ? ? ? 2.124 ? ? metalc4 metalc ? ? E HOH . O ? ? ? 1_555 C MG . MG ? ? A HOH 409 A MG 1003 1_555 ? ? ? ? ? ? ? 2.168 ? ? metalc5 metalc ? ? E HOH . O ? ? ? 1_555 C MG . MG ? ? A HOH 512 A MG 1003 1_555 ? ? ? ? ? ? ? 2.200 ? ? metalc6 metalc ? ? C MG . MG ? ? ? 1_555 B PO4 . O1 ? ? A MG 1003 A PO4 1228 1_555 ? ? ? ? ? ? ? 2.168 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PRO _struct_mon_prot_cis.label_seq_id 175 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PRO _struct_mon_prot_cis.auth_seq_id 206 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 176 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 207 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.19 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 128 ? LEU A 130 ? ILE A 159 LEU A 161 A 2 THR A 93 ? THR A 99 ? THR A 124 THR A 130 A 3 LEU A 5 ? VAL A 9 ? LEU A 36 VAL A 40 A 4 LEU A 141 ? ASP A 144 ? LEU A 172 ASP A 175 A 5 GLU A 159 ? PHE A 163 ? GLU A 190 PHE A 194 A 6 ARG A 179 ? LEU A 180 ? ARG A 210 LEU A 211 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 129 ? O VAL A 160 N ILE A 97 ? N ILE A 128 A 2 3 O ASP A 94 ? O ASP A 125 N LEU A 5 ? N LEU A 36 A 3 4 N LEU A 8 ? N LEU A 39 O LEU A 141 ? O LEU A 172 A 4 5 N LEU A 142 ? N LEU A 173 O VAL A 161 ? O VAL A 192 A 5 6 N LEU A 162 ? N LEU A 193 O LEU A 180 ? O LEU A 211 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A PO4 1228 ? 11 'BINDING SITE FOR RESIDUE PO4 A 1228' AC2 Software A MG 1003 ? 6 'BINDING SITE FOR RESIDUE MG A 1003' AC3 Software A DPB 1 ? 19 'BINDING SITE FOR RESIDUE DPB A 1' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 11 DPB D . ? DPB A 1 . ? 1_555 ? 2 AC1 11 HOH E . ? HOH A 8 . ? 1_555 ? 3 AC1 11 ASP A 10 ? ASP A 41 . ? 1_555 ? 4 AC1 11 MET A 11 ? MET A 42 . ? 1_555 ? 5 AC1 11 ASP A 12 ? ASP A 43 . ? 1_555 ? 6 AC1 11 THR A 99 ? THR A 130 . ? 1_555 ? 7 AC1 11 SER A 100 ? SER A 131 . ? 1_555 ? 8 AC1 11 LYS A 134 ? LYS A 165 . ? 1_555 ? 9 AC1 11 HOH E . ? HOH A 409 . ? 1_555 ? 10 AC1 11 HOH E . ? HOH A 459 . ? 1_555 ? 11 AC1 11 MG C . ? MG A 1003 . ? 1_555 ? 12 AC2 6 ASP A 10 ? ASP A 41 . ? 1_555 ? 13 AC2 6 ASP A 12 ? ASP A 43 . ? 1_555 ? 14 AC2 6 ASP A 145 ? ASP A 176 . ? 1_555 ? 15 AC2 6 HOH E . ? HOH A 409 . ? 1_555 ? 16 AC2 6 HOH E . ? HOH A 512 . ? 1_555 ? 17 AC2 6 PO4 B . ? PO4 A 1228 . ? 1_555 ? 18 AC3 19 PHE A 18 ? PHE A 49 . ? 1_555 ? 19 AC3 19 PHE A 44 ? PHE A 75 . ? 1_555 ? 20 AC3 19 TRP A 45 ? TRP A 76 . ? 1_555 ? 21 AC3 19 VAL A 46 ? VAL A 77 . ? 1_555 ? 22 AC3 19 TRP A 65 ? TRP A 96 . ? 1_555 ? 23 AC3 19 SER A 100 ? SER A 131 . ? 1_555 ? 24 AC3 19 PRO A 101 ? PRO A 132 . ? 1_555 ? 25 AC3 19 ILE A 102 ? ILE A 133 . ? 1_555 ? 26 AC3 19 LYS A 103 ? LYS A 134 . ? 1_555 ? 27 AC3 19 ARG A 132 ? ARG A 163 . ? 1_555 ? 28 AC3 19 HOH E . ? HOH A 324 . ? 3_554 ? 29 AC3 19 HOH E . ? HOH A 342 . ? 1_555 ? 30 AC3 19 HOH E . ? HOH A 459 . ? 1_555 ? 31 AC3 19 HOH E . ? HOH A 511 . ? 1_555 ? 32 AC3 19 HOH E . ? HOH A 512 . ? 1_555 ? 33 AC3 19 HOH E . ? HOH A 516 . ? 1_555 ? 34 AC3 19 HOH E . ? HOH A 534 . ? 1_555 ? 35 AC3 19 HOH E . ? HOH A 579 . ? 1_555 ? 36 AC3 19 PO4 B . ? PO4 A 1228 . ? 1_555 ? # _database_PDB_matrix.entry_id 1Q91 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1Q91 _atom_sites.fract_transf_matrix[1][1] 0.013578 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013578 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009361 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 32 ? ? ? A . n A 1 2 GLY 2 33 ? ? ? A . n A 1 3 ARG 3 34 34 ARG ARG A . n A 1 4 ALA 4 35 35 ALA ALA A . n A 1 5 LEU 5 36 36 LEU LEU A . n A 1 6 ARG 6 37 37 ARG ARG A . n A 1 7 VAL 7 38 38 VAL VAL A . n A 1 8 LEU 8 39 39 LEU LEU A . n A 1 9 VAL 9 40 40 VAL VAL A . n A 1 10 ASP 10 41 41 ASP ASP A . n A 1 11 MET 11 42 42 MET MET A . n A 1 12 ASP 12 43 43 ASP ASP A . n A 1 13 GLY 13 44 44 GLY GLY A . n A 1 14 VAL 14 45 45 VAL VAL A . n A 1 15 LEU 15 46 46 LEU LEU A . n A 1 16 ALA 16 47 47 ALA ALA A . n A 1 17 ASP 17 48 48 ASP ASP A . n A 1 18 PHE 18 49 49 PHE PHE A . n A 1 19 GLU 19 50 50 GLU GLU A . n A 1 20 GLY 20 51 51 GLY GLY A . n A 1 21 GLY 21 52 52 GLY GLY A . n A 1 22 PHE 22 53 53 PHE PHE A . n A 1 23 LEU 23 54 54 LEU LEU A . n A 1 24 ARG 24 55 55 ARG ARG A . n A 1 25 LYS 25 56 56 LYS LYS A . n A 1 26 PHE 26 57 57 PHE PHE A . n A 1 27 ARG 27 58 58 ARG ARG A . n A 1 28 ALA 28 59 59 ALA ALA A . n A 1 29 ARG 29 60 60 ARG ARG A . n A 1 30 PHE 30 61 61 PHE PHE A . n A 1 31 PRO 31 62 62 PRO PRO A . n A 1 32 ASP 32 63 63 ASP ASP A . n A 1 33 GLN 33 64 64 GLN GLN A . n A 1 34 PRO 34 65 65 PRO PRO A . n A 1 35 PHE 35 66 66 PHE PHE A . n A 1 36 ILE 36 67 67 ILE ILE A . n A 1 37 ALA 37 68 68 ALA ALA A . n A 1 38 LEU 38 69 69 LEU LEU A . n A 1 39 GLU 39 70 70 GLU GLU A . n A 1 40 ASP 40 71 71 ASP ASP A . n A 1 41 ARG 41 72 72 ARG ARG A . n A 1 42 ARG 42 73 73 ARG ARG A . n A 1 43 GLY 43 74 74 GLY GLY A . n A 1 44 PHE 44 75 75 PHE PHE A . n A 1 45 TRP 45 76 76 TRP TRP A . n A 1 46 VAL 46 77 77 VAL VAL A . n A 1 47 SER 47 78 78 SER SER A . n A 1 48 GLU 48 79 79 GLU GLU A . n A 1 49 GLN 49 80 80 GLN GLN A . n A 1 50 TYR 50 81 81 TYR TYR A . n A 1 51 GLY 51 82 82 GLY GLY A . n A 1 52 ARG 52 83 83 ARG ARG A . n A 1 53 LEU 53 84 84 LEU LEU A . n A 1 54 ARG 54 85 85 ARG ARG A . n A 1 55 PRO 55 86 86 PRO PRO A . n A 1 56 GLY 56 87 87 GLY GLY A . n A 1 57 LEU 57 88 88 LEU LEU A . n A 1 58 SER 58 89 89 SER SER A . n A 1 59 GLU 59 90 90 GLU GLU A . n A 1 60 LYS 60 91 91 LYS LYS A . n A 1 61 ALA 61 92 92 ALA ALA A . n A 1 62 ILE 62 93 93 ILE ILE A . n A 1 63 SER 63 94 94 SER SER A . n A 1 64 ILE 64 95 95 ILE ILE A . n A 1 65 TRP 65 96 96 TRP TRP A . n A 1 66 GLU 66 97 97 GLU GLU A . n A 1 67 SER 67 98 98 SER SER A . n A 1 68 LYS 68 99 99 LYS LYS A . n A 1 69 ASN 69 100 100 ASN ASN A . n A 1 70 PHE 70 101 101 PHE PHE A . n A 1 71 PHE 71 102 102 PHE PHE A . n A 1 72 PHE 72 103 103 PHE PHE A . n A 1 73 GLU 73 104 104 GLU GLU A . n A 1 74 LEU 74 105 105 LEU LEU A . n A 1 75 GLU 75 106 106 GLU GLU A . n A 1 76 PRO 76 107 107 PRO PRO A . n A 1 77 LEU 77 108 108 LEU LEU A . n A 1 78 PRO 78 109 109 PRO PRO A . n A 1 79 GLY 79 110 110 GLY GLY A . n A 1 80 ALA 80 111 111 ALA ALA A . n A 1 81 VAL 81 112 112 VAL VAL A . n A 1 82 GLU 82 113 113 GLU GLU A . n A 1 83 ALA 83 114 114 ALA ALA A . n A 1 84 VAL 84 115 115 VAL VAL A . n A 1 85 LYS 85 116 116 LYS LYS A . n A 1 86 GLU 86 117 117 GLU GLU A . n A 1 87 MET 87 118 118 MET MET A . n A 1 88 ALA 88 119 119 ALA ALA A . n A 1 89 SER 89 120 120 SER SER A . n A 1 90 LEU 90 121 121 LEU LEU A . n A 1 91 GLN 91 122 122 GLN GLN A . n A 1 92 ASN 92 123 123 ASN ASN A . n A 1 93 THR 93 124 124 THR THR A . n A 1 94 ASP 94 125 125 ASP ASP A . n A 1 95 VAL 95 126 126 VAL VAL A . n A 1 96 PHE 96 127 127 PHE PHE A . n A 1 97 ILE 97 128 128 ILE ILE A . n A 1 98 CYS 98 129 129 CYS CYS A . n A 1 99 THR 99 130 130 THR THR A . n A 1 100 SER 100 131 131 SER SER A . n A 1 101 PRO 101 132 132 PRO PRO A . n A 1 102 ILE 102 133 133 ILE ILE A . n A 1 103 LYS 103 134 134 LYS LYS A . n A 1 104 MET 104 135 135 MET MET A . n A 1 105 PHE 105 136 136 PHE PHE A . n A 1 106 LYS 106 137 137 LYS LYS A . n A 1 107 TYR 107 138 138 TYR TYR A . n A 1 108 CYS 108 139 139 CYS CYS A . n A 1 109 PRO 109 140 140 PRO PRO A . n A 1 110 TYR 110 141 141 TYR TYR A . n A 1 111 GLU 111 142 142 GLU GLU A . n A 1 112 LYS 112 143 143 LYS LYS A . n A 1 113 TYR 113 144 144 TYR TYR A . n A 1 114 ALA 114 145 145 ALA ALA A . n A 1 115 TRP 115 146 146 TRP TRP A . n A 1 116 VAL 116 147 147 VAL VAL A . n A 1 117 GLU 117 148 148 GLU GLU A . n A 1 118 LYS 118 149 149 LYS LYS A . n A 1 119 TYR 119 150 150 TYR TYR A . n A 1 120 PHE 120 151 151 PHE PHE A . n A 1 121 GLY 121 152 152 GLY GLY A . n A 1 122 PRO 122 153 153 PRO PRO A . n A 1 123 ASP 123 154 154 ASP ASP A . n A 1 124 PHE 124 155 155 PHE PHE A . n A 1 125 LEU 125 156 156 LEU LEU A . n A 1 126 GLU 126 157 157 GLU GLU A . n A 1 127 GLN 127 158 158 GLN GLN A . n A 1 128 ILE 128 159 159 ILE ILE A . n A 1 129 VAL 129 160 160 VAL VAL A . n A 1 130 LEU 130 161 161 LEU LEU A . n A 1 131 THR 131 162 162 THR THR A . n A 1 132 ARG 132 163 163 ARG ARG A . n A 1 133 ASP 133 164 164 ASP ASP A . n A 1 134 LYS 134 165 165 LYS LYS A . n A 1 135 THR 135 166 166 THR THR A . n A 1 136 VAL 136 167 167 VAL VAL A . n A 1 137 VAL 137 168 168 VAL VAL A . n A 1 138 SER 138 169 169 SER SER A . n A 1 139 ALA 139 170 170 ALA ALA A . n A 1 140 ASP 140 171 171 ASP ASP A . n A 1 141 LEU 141 172 172 LEU LEU A . n A 1 142 LEU 142 173 173 LEU LEU A . n A 1 143 ILE 143 174 174 ILE ILE A . n A 1 144 ASP 144 175 175 ASP ASP A . n A 1 145 ASP 145 176 176 ASP ASP A . n A 1 146 ARG 146 177 177 ARG ARG A . n A 1 147 PRO 147 178 178 PRO PRO A . n A 1 148 ASP 148 179 179 ASP ASP A . n A 1 149 ILE 149 180 180 ILE ILE A . n A 1 150 THR 150 181 181 THR THR A . n A 1 151 GLY 151 182 182 GLY GLY A . n A 1 152 ALA 152 183 183 ALA ALA A . n A 1 153 GLU 153 184 184 GLU GLU A . n A 1 154 PRO 154 185 185 PRO PRO A . n A 1 155 THR 155 186 186 THR THR A . n A 1 156 PRO 156 187 187 PRO PRO A . n A 1 157 SER 157 188 188 SER SER A . n A 1 158 TRP 158 189 189 TRP TRP A . n A 1 159 GLU 159 190 190 GLU GLU A . n A 1 160 HIS 160 191 191 HIS HIS A . n A 1 161 VAL 161 192 192 VAL VAL A . n A 1 162 LEU 162 193 193 LEU LEU A . n A 1 163 PHE 163 194 194 PHE PHE A . n A 1 164 THR 164 195 195 THR THR A . n A 1 165 ALA 165 196 196 ALA ALA A . n A 1 166 CYS 166 197 197 CYS CYS A . n A 1 167 HIS 167 198 198 HIS HIS A . n A 1 168 ASN 168 199 199 ASN ASN A . n A 1 169 GLN 169 200 200 GLN GLN A . n A 1 170 HIS 170 201 201 HIS HIS A . n A 1 171 LEU 171 202 202 LEU LEU A . n A 1 172 GLN 172 203 203 GLN GLN A . n A 1 173 LEU 173 204 204 LEU LEU A . n A 1 174 GLN 174 205 205 GLN GLN A . n A 1 175 PRO 175 206 206 PRO PRO A . n A 1 176 PRO 176 207 207 PRO PRO A . n A 1 177 ARG 177 208 208 ARG ARG A . n A 1 178 ARG 178 209 209 ARG ARG A . n A 1 179 ARG 179 210 210 ARG ARG A . n A 1 180 LEU 180 211 211 LEU LEU A . n A 1 181 HIS 181 212 212 HIS HIS A . n A 1 182 SER 182 213 213 SER SER A . n A 1 183 TRP 183 214 214 TRP TRP A . n A 1 184 ALA 184 215 215 ALA ALA A . n A 1 185 ASP 185 216 216 ASP ASP A . n A 1 186 ASP 186 217 217 ASP ASP A . n A 1 187 TRP 187 218 218 TRP TRP A . n A 1 188 LYS 188 219 219 LYS LYS A . n A 1 189 ALA 189 220 220 ALA ALA A . n A 1 190 ILE 190 221 221 ILE ILE A . n A 1 191 LEU 191 222 222 LEU LEU A . n A 1 192 ASP 192 223 223 ASP ASP A . n A 1 193 SER 193 224 224 SER SER A . n A 1 194 LYS 194 225 225 LYS LYS A . n A 1 195 ARG 195 226 226 ARG ARG A . n A 1 196 PRO 196 227 227 PRO PRO A . n A 1 197 CYS 197 228 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 1 1228 1228 PO4 PO4 A . C 3 MG 1 1003 1003 MG MG A . D 4 DPB 1 1 1 DPB DPB A . E 5 HOH 1 2 2 HOH HOH A . E 5 HOH 2 3 3 HOH HOH A . E 5 HOH 3 4 4 HOH HOH A . E 5 HOH 4 5 5 HOH HOH A . E 5 HOH 5 6 6 HOH HOH A . E 5 HOH 6 7 7 HOH HOH A . E 5 HOH 7 8 8 HOH HOH A . E 5 HOH 8 9 9 HOH HOH A . E 5 HOH 9 10 10 HOH HOH A . E 5 HOH 10 11 11 HOH HOH A . E 5 HOH 11 12 12 HOH HOH A . E 5 HOH 12 13 13 HOH HOH A . E 5 HOH 13 14 14 HOH HOH A . E 5 HOH 14 15 15 HOH HOH A . E 5 HOH 15 16 16 HOH HOH A . E 5 HOH 16 17 17 HOH HOH A . E 5 HOH 17 18 18 HOH HOH A . E 5 HOH 18 19 19 HOH HOH A . E 5 HOH 19 20 20 HOH HOH A . E 5 HOH 20 21 21 HOH HOH A . E 5 HOH 21 22 22 HOH HOH A . E 5 HOH 22 23 23 HOH HOH A . E 5 HOH 23 24 24 HOH HOH A . E 5 HOH 24 25 25 HOH HOH A . E 5 HOH 25 26 26 HOH HOH A . E 5 HOH 26 27 27 HOH HOH A . E 5 HOH 27 28 28 HOH HOH A . E 5 HOH 28 29 29 HOH HOH A . E 5 HOH 29 30 30 HOH HOH A . E 5 HOH 30 31 31 HOH HOH A . E 5 HOH 31 229 229 HOH HOH A . E 5 HOH 32 230 230 HOH HOH A . E 5 HOH 33 231 231 HOH HOH A . E 5 HOH 34 232 232 HOH HOH A . E 5 HOH 35 233 233 HOH HOH A . E 5 HOH 36 234 234 HOH HOH A . E 5 HOH 37 235 235 HOH HOH A . E 5 HOH 38 236 236 HOH HOH A . E 5 HOH 39 237 237 HOH HOH A . E 5 HOH 40 238 238 HOH HOH A . E 5 HOH 41 239 239 HOH HOH A . E 5 HOH 42 240 240 HOH HOH A . E 5 HOH 43 241 241 HOH HOH A . E 5 HOH 44 242 242 HOH HOH A . E 5 HOH 45 243 243 HOH HOH A . E 5 HOH 46 244 244 HOH HOH A . E 5 HOH 47 245 245 HOH HOH A . E 5 HOH 48 246 246 HOH HOH A . E 5 HOH 49 247 247 HOH HOH A . E 5 HOH 50 248 248 HOH HOH A . E 5 HOH 51 249 249 HOH HOH A . E 5 HOH 52 250 250 HOH HOH A . E 5 HOH 53 251 251 HOH HOH A . E 5 HOH 54 252 252 HOH HOH A . E 5 HOH 55 253 253 HOH HOH A . E 5 HOH 56 254 254 HOH HOH A . E 5 HOH 57 255 255 HOH HOH A . E 5 HOH 58 256 256 HOH HOH A . E 5 HOH 59 257 257 HOH HOH A . E 5 HOH 60 258 258 HOH HOH A . E 5 HOH 61 259 259 HOH HOH A . E 5 HOH 62 260 260 HOH HOH A . E 5 HOH 63 261 261 HOH HOH A . E 5 HOH 64 262 262 HOH HOH A . E 5 HOH 65 263 263 HOH HOH A . E 5 HOH 66 264 264 HOH HOH A . E 5 HOH 67 265 265 HOH HOH A . E 5 HOH 68 266 266 HOH HOH A . E 5 HOH 69 267 267 HOH HOH A . E 5 HOH 70 268 268 HOH HOH A . E 5 HOH 71 269 269 HOH HOH A . E 5 HOH 72 270 270 HOH HOH A . E 5 HOH 73 271 271 HOH HOH A . E 5 HOH 74 272 272 HOH HOH A . E 5 HOH 75 273 273 HOH HOH A . E 5 HOH 76 274 274 HOH HOH A . E 5 HOH 77 275 275 HOH HOH A . E 5 HOH 78 276 276 HOH HOH A . E 5 HOH 79 277 277 HOH HOH A . E 5 HOH 80 278 278 HOH HOH A . E 5 HOH 81 279 32 HOH HOH A . E 5 HOH 82 280 280 HOH HOH A . E 5 HOH 83 281 281 HOH HOH A . E 5 HOH 84 282 282 HOH HOH A . E 5 HOH 85 283 283 HOH HOH A . E 5 HOH 86 284 284 HOH HOH A . E 5 HOH 87 285 285 HOH HOH A . E 5 HOH 88 286 286 HOH HOH A . E 5 HOH 89 287 287 HOH HOH A . E 5 HOH 90 288 288 HOH HOH A . E 5 HOH 91 289 289 HOH HOH A . E 5 HOH 92 290 290 HOH HOH A . E 5 HOH 93 291 291 HOH HOH A . E 5 HOH 94 292 292 HOH HOH A . E 5 HOH 95 293 293 HOH HOH A . E 5 HOH 96 294 294 HOH HOH A . E 5 HOH 97 295 295 HOH HOH A . E 5 HOH 98 296 296 HOH HOH A . E 5 HOH 99 297 297 HOH HOH A . E 5 HOH 100 298 298 HOH HOH A . E 5 HOH 101 299 299 HOH HOH A . E 5 HOH 102 300 300 HOH HOH A . E 5 HOH 103 301 301 HOH HOH A . E 5 HOH 104 302 302 HOH HOH A . E 5 HOH 105 303 303 HOH HOH A . E 5 HOH 106 304 304 HOH HOH A . E 5 HOH 107 305 33 HOH HOH A . E 5 HOH 108 306 306 HOH HOH A . E 5 HOH 109 307 307 HOH HOH A . E 5 HOH 110 308 308 HOH HOH A . E 5 HOH 111 309 309 HOH HOH A . E 5 HOH 112 310 310 HOH HOH A . E 5 HOH 113 311 311 HOH HOH A . E 5 HOH 114 312 312 HOH HOH A . E 5 HOH 115 313 313 HOH HOH A . E 5 HOH 116 314 314 HOH HOH A . E 5 HOH 117 315 315 HOH HOH A . E 5 HOH 118 316 316 HOH HOH A . E 5 HOH 119 317 317 HOH HOH A . E 5 HOH 120 318 318 HOH HOH A . E 5 HOH 121 319 319 HOH HOH A . E 5 HOH 122 320 320 HOH HOH A . E 5 HOH 123 321 321 HOH HOH A . E 5 HOH 124 322 322 HOH HOH A . E 5 HOH 125 323 323 HOH HOH A . E 5 HOH 126 324 324 HOH HOH A . E 5 HOH 127 325 325 HOH HOH A . E 5 HOH 128 326 326 HOH HOH A . E 5 HOH 129 327 327 HOH HOH A . E 5 HOH 130 328 328 HOH HOH A . E 5 HOH 131 329 329 HOH HOH A . E 5 HOH 132 330 330 HOH HOH A . E 5 HOH 133 331 331 HOH HOH A . E 5 HOH 134 332 332 HOH HOH A . E 5 HOH 135 333 333 HOH HOH A . E 5 HOH 136 334 334 HOH HOH A . E 5 HOH 137 335 35 HOH HOH A . E 5 HOH 138 336 36 HOH HOH A . E 5 HOH 139 337 37 HOH HOH A . E 5 HOH 140 338 38 HOH HOH A . E 5 HOH 141 339 39 HOH HOH A . E 5 HOH 142 340 40 HOH HOH A . E 5 HOH 143 341 41 HOH HOH A . E 5 HOH 144 342 42 HOH HOH A . E 5 HOH 145 343 43 HOH HOH A . E 5 HOH 146 344 44 HOH HOH A . E 5 HOH 147 345 45 HOH HOH A . E 5 HOH 148 346 46 HOH HOH A . E 5 HOH 149 347 47 HOH HOH A . E 5 HOH 150 348 49 HOH HOH A . E 5 HOH 151 349 51 HOH HOH A . E 5 HOH 152 350 52 HOH HOH A . E 5 HOH 153 351 53 HOH HOH A . E 5 HOH 154 352 54 HOH HOH A . E 5 HOH 155 353 55 HOH HOH A . E 5 HOH 156 354 56 HOH HOH A . E 5 HOH 157 355 57 HOH HOH A . E 5 HOH 158 356 58 HOH HOH A . E 5 HOH 159 357 59 HOH HOH A . E 5 HOH 160 358 60 HOH HOH A . E 5 HOH 161 359 61 HOH HOH A . E 5 HOH 162 360 62 HOH HOH A . E 5 HOH 163 361 63 HOH HOH A . E 5 HOH 164 362 64 HOH HOH A . E 5 HOH 165 363 65 HOH HOH A . E 5 HOH 166 364 66 HOH HOH A . E 5 HOH 167 365 67 HOH HOH A . E 5 HOH 168 366 68 HOH HOH A . E 5 HOH 169 367 69 HOH HOH A . E 5 HOH 170 368 70 HOH HOH A . E 5 HOH 171 369 71 HOH HOH A . E 5 HOH 172 370 72 HOH HOH A . E 5 HOH 173 371 73 HOH HOH A . E 5 HOH 174 372 74 HOH HOH A . E 5 HOH 175 373 75 HOH HOH A . E 5 HOH 176 374 76 HOH HOH A . E 5 HOH 177 375 77 HOH HOH A . E 5 HOH 178 376 78 HOH HOH A . E 5 HOH 179 377 79 HOH HOH A . E 5 HOH 180 378 80 HOH HOH A . E 5 HOH 181 379 81 HOH HOH A . E 5 HOH 182 380 82 HOH HOH A . E 5 HOH 183 381 83 HOH HOH A . E 5 HOH 184 382 84 HOH HOH A . E 5 HOH 185 383 85 HOH HOH A . E 5 HOH 186 384 86 HOH HOH A . E 5 HOH 187 385 87 HOH HOH A . E 5 HOH 188 386 88 HOH HOH A . E 5 HOH 189 387 89 HOH HOH A . E 5 HOH 190 388 90 HOH HOH A . E 5 HOH 191 389 91 HOH HOH A . E 5 HOH 192 390 92 HOH HOH A . E 5 HOH 193 391 93 HOH HOH A . E 5 HOH 194 392 94 HOH HOH A . E 5 HOH 195 393 95 HOH HOH A . E 5 HOH 196 394 96 HOH HOH A . E 5 HOH 197 395 97 HOH HOH A . E 5 HOH 198 396 98 HOH HOH A . E 5 HOH 199 397 99 HOH HOH A . E 5 HOH 200 398 100 HOH HOH A . E 5 HOH 201 399 101 HOH HOH A . E 5 HOH 202 400 102 HOH HOH A . E 5 HOH 203 401 103 HOH HOH A . E 5 HOH 204 402 104 HOH HOH A . E 5 HOH 205 403 105 HOH HOH A . E 5 HOH 206 404 106 HOH HOH A . E 5 HOH 207 405 107 HOH HOH A . E 5 HOH 208 406 108 HOH HOH A . E 5 HOH 209 407 109 HOH HOH A . E 5 HOH 210 408 110 HOH HOH A . E 5 HOH 211 409 111 HOH HOH A . E 5 HOH 212 410 113 HOH HOH A . E 5 HOH 213 411 114 HOH HOH A . E 5 HOH 214 412 115 HOH HOH A . E 5 HOH 215 413 116 HOH HOH A . E 5 HOH 216 414 117 HOH HOH A . E 5 HOH 217 415 118 HOH HOH A . E 5 HOH 218 416 119 HOH HOH A . E 5 HOH 219 417 120 HOH HOH A . E 5 HOH 220 418 121 HOH HOH A . E 5 HOH 221 419 122 HOH HOH A . E 5 HOH 222 420 123 HOH HOH A . E 5 HOH 223 421 124 HOH HOH A . E 5 HOH 224 422 125 HOH HOH A . E 5 HOH 225 423 126 HOH HOH A . E 5 HOH 226 424 127 HOH HOH A . E 5 HOH 227 425 128 HOH HOH A . E 5 HOH 228 426 129 HOH HOH A . E 5 HOH 229 427 130 HOH HOH A . E 5 HOH 230 428 131 HOH HOH A . E 5 HOH 231 429 132 HOH HOH A . E 5 HOH 232 430 133 HOH HOH A . E 5 HOH 233 431 134 HOH HOH A . E 5 HOH 234 432 135 HOH HOH A . E 5 HOH 235 433 136 HOH HOH A . E 5 HOH 236 434 137 HOH HOH A . E 5 HOH 237 435 138 HOH HOH A . E 5 HOH 238 436 139 HOH HOH A . E 5 HOH 239 437 140 HOH HOH A . E 5 HOH 240 438 141 HOH HOH A . E 5 HOH 241 439 142 HOH HOH A . E 5 HOH 242 440 143 HOH HOH A . E 5 HOH 243 441 144 HOH HOH A . E 5 HOH 244 442 145 HOH HOH A . E 5 HOH 245 443 146 HOH HOH A . E 5 HOH 246 444 147 HOH HOH A . E 5 HOH 247 445 148 HOH HOH A . E 5 HOH 248 446 149 HOH HOH A . E 5 HOH 249 447 150 HOH HOH A . E 5 HOH 250 448 151 HOH HOH A . E 5 HOH 251 449 152 HOH HOH A . E 5 HOH 252 450 153 HOH HOH A . E 5 HOH 253 451 154 HOH HOH A . E 5 HOH 254 452 155 HOH HOH A . E 5 HOH 255 453 156 HOH HOH A . E 5 HOH 256 454 157 HOH HOH A . E 5 HOH 257 455 158 HOH HOH A . E 5 HOH 258 456 159 HOH HOH A . E 5 HOH 259 457 160 HOH HOH A . E 5 HOH 260 458 161 HOH HOH A . E 5 HOH 261 459 162 HOH HOH A . E 5 HOH 262 460 163 HOH HOH A . E 5 HOH 263 461 164 HOH HOH A . E 5 HOH 264 462 165 HOH HOH A . E 5 HOH 265 463 166 HOH HOH A . E 5 HOH 266 464 167 HOH HOH A . E 5 HOH 267 465 168 HOH HOH A . E 5 HOH 268 466 169 HOH HOH A . E 5 HOH 269 467 170 HOH HOH A . E 5 HOH 270 468 171 HOH HOH A . E 5 HOH 271 469 172 HOH HOH A . E 5 HOH 272 470 173 HOH HOH A . E 5 HOH 273 471 174 HOH HOH A . E 5 HOH 274 472 175 HOH HOH A . E 5 HOH 275 473 176 HOH HOH A . E 5 HOH 276 474 177 HOH HOH A . E 5 HOH 277 475 178 HOH HOH A . E 5 HOH 278 476 179 HOH HOH A . E 5 HOH 279 477 180 HOH HOH A . E 5 HOH 280 478 181 HOH HOH A . E 5 HOH 281 479 182 HOH HOH A . E 5 HOH 282 480 183 HOH HOH A . E 5 HOH 283 481 184 HOH HOH A . E 5 HOH 284 482 186 HOH HOH A . E 5 HOH 285 483 187 HOH HOH A . E 5 HOH 286 484 188 HOH HOH A . E 5 HOH 287 485 189 HOH HOH A . E 5 HOH 288 486 190 HOH HOH A . E 5 HOH 289 487 191 HOH HOH A . E 5 HOH 290 488 192 HOH HOH A . E 5 HOH 291 489 193 HOH HOH A . E 5 HOH 292 490 194 HOH HOH A . E 5 HOH 293 491 196 HOH HOH A . E 5 HOH 294 492 197 HOH HOH A . E 5 HOH 295 493 198 HOH HOH A . E 5 HOH 296 494 199 HOH HOH A . E 5 HOH 297 495 200 HOH HOH A . E 5 HOH 298 496 201 HOH HOH A . E 5 HOH 299 497 202 HOH HOH A . E 5 HOH 300 498 203 HOH HOH A . E 5 HOH 301 499 204 HOH HOH A . E 5 HOH 302 500 205 HOH HOH A . E 5 HOH 303 501 206 HOH HOH A . E 5 HOH 304 502 207 HOH HOH A . E 5 HOH 305 503 208 HOH HOH A . E 5 HOH 306 504 209 HOH HOH A . E 5 HOH 307 505 210 HOH HOH A . E 5 HOH 308 506 211 HOH HOH A . E 5 HOH 309 507 212 HOH HOH A . E 5 HOH 310 508 213 HOH HOH A . E 5 HOH 311 509 214 HOH HOH A . E 5 HOH 312 510 215 HOH HOH A . E 5 HOH 313 511 216 HOH HOH A . E 5 HOH 314 512 512 HOH HOH A . E 5 HOH 315 513 217 HOH HOH A . E 5 HOH 316 514 218 HOH HOH A . E 5 HOH 317 515 219 HOH HOH A . E 5 HOH 318 516 220 HOH HOH A . E 5 HOH 319 517 221 HOH HOH A . E 5 HOH 320 518 222 HOH HOH A . E 5 HOH 321 519 223 HOH HOH A . E 5 HOH 322 520 224 HOH HOH A . E 5 HOH 323 521 225 HOH HOH A . E 5 HOH 324 522 226 HOH HOH A . E 5 HOH 325 523 227 HOH HOH A . E 5 HOH 326 524 228 HOH HOH A . E 5 HOH 327 534 534 HOH HOH A . E 5 HOH 328 579 579 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? A ASP 10 ? A ASP 41 ? 1_555 MG ? C MG . ? A MG 1003 ? 1_555 O ? A ASP 12 ? A ASP 43 ? 1_555 86.6 ? 2 OD2 ? A ASP 10 ? A ASP 41 ? 1_555 MG ? C MG . ? A MG 1003 ? 1_555 OD1 ? A ASP 145 ? A ASP 176 ? 1_555 81.5 ? 3 O ? A ASP 12 ? A ASP 43 ? 1_555 MG ? C MG . ? A MG 1003 ? 1_555 OD1 ? A ASP 145 ? A ASP 176 ? 1_555 89.5 ? 4 OD2 ? A ASP 10 ? A ASP 41 ? 1_555 MG ? C MG . ? A MG 1003 ? 1_555 O ? E HOH . ? A HOH 409 ? 1_555 91.8 ? 5 O ? A ASP 12 ? A ASP 43 ? 1_555 MG ? C MG . ? A MG 1003 ? 1_555 O ? E HOH . ? A HOH 409 ? 1_555 178.4 ? 6 OD1 ? A ASP 145 ? A ASP 176 ? 1_555 MG ? C MG . ? A MG 1003 ? 1_555 O ? E HOH . ? A HOH 409 ? 1_555 90.4 ? 7 OD2 ? A ASP 10 ? A ASP 41 ? 1_555 MG ? C MG . ? A MG 1003 ? 1_555 O ? E HOH . ? A HOH 512 ? 1_555 167.6 ? 8 O ? A ASP 12 ? A ASP 43 ? 1_555 MG ? C MG . ? A MG 1003 ? 1_555 O ? E HOH . ? A HOH 512 ? 1_555 85.5 ? 9 OD1 ? A ASP 145 ? A ASP 176 ? 1_555 MG ? C MG . ? A MG 1003 ? 1_555 O ? E HOH . ? A HOH 512 ? 1_555 89.0 ? 10 O ? E HOH . ? A HOH 409 ? 1_555 MG ? C MG . ? A MG 1003 ? 1_555 O ? E HOH . ? A HOH 512 ? 1_555 96.1 ? 11 OD2 ? A ASP 10 ? A ASP 41 ? 1_555 MG ? C MG . ? A MG 1003 ? 1_555 O1 ? B PO4 . ? A PO4 1228 ? 1_555 90.0 ? 12 O ? A ASP 12 ? A ASP 43 ? 1_555 MG ? C MG . ? A MG 1003 ? 1_555 O1 ? B PO4 . ? A PO4 1228 ? 1_555 94.8 ? 13 OD1 ? A ASP 145 ? A ASP 176 ? 1_555 MG ? C MG . ? A MG 1003 ? 1_555 O1 ? B PO4 . ? A PO4 1228 ? 1_555 170.2 ? 14 O ? E HOH . ? A HOH 409 ? 1_555 MG ? C MG . ? A MG 1003 ? 1_555 O1 ? B PO4 . ? A PO4 1228 ? 1_555 85.0 ? 15 O ? E HOH . ? A HOH 512 ? 1_555 MG ? C MG . ? A MG 1003 ? 1_555 O1 ? B PO4 . ? A PO4 1228 ? 1_555 100.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-04-20 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.value' 14 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 15 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 16 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 17 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 18 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 19 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 20 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 21 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 22 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 23 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 24 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 25 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 26 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.0 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 CNS phasing . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MET A 42 ? ? -98.34 -72.21 2 1 SER A 213 ? ? 173.20 173.97 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 "C1'" ? A DPB 1 ? 'WRONG HAND' . 2 1 "C4'" ? A DPB 1 ? 'WRONG HAND' . 3 1 "C3'" ? A DPB 1 ? 'WRONG HAND' . 4 1 "C6'" ? A DPB 1 ? 'WRONG HAND' . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 32 ? A GLY 1 2 1 Y 1 A GLY 33 ? A GLY 2 3 1 Y 1 A CYS 228 ? A CYS 197 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DPB C11 C Y N 88 DPB C12 C Y N 89 DPB C7 C Y N 90 DPB C8 C Y N 91 DPB C9 C Y N 92 DPB C10 C Y N 93 DPB C2 C N N 94 DPB N1 N N N 95 DPB C6 C N N 96 DPB C5 C N N 97 DPB C4 C N N 98 DPB N3 N N N 99 DPB O2 O N N 100 DPB O4 O N N 101 DPB C5M C N N 102 DPB "C1'" C N S 103 DPB "O4'" O N N 104 DPB "C4'" C N S 105 DPB "C3'" C N S 106 DPB "C2'" C N N 107 DPB "C5'" C N N 108 DPB "O5'" O N N 109 DPB "C6'" C N S 110 DPB "O3'" O N N 111 DPB P P N N 112 DPB OP2 O N N 113 DPB OP1 O N N 114 DPB OP3 O N N 115 DPB H11 H N N 116 DPB H12 H N N 117 DPB H8 H N N 118 DPB H9 H N N 119 DPB H10 H N N 120 DPB H6 H N N 121 DPB H3 H N N 122 DPB H71 H N N 123 DPB H72 H N N 124 DPB H73 H N N 125 DPB "H1'" H N N 126 DPB "H4'" H N N 127 DPB "H3'" H N N 128 DPB "H2'" H N N 129 DPB "H2''" H N N 130 DPB "H5'" H N N 131 DPB "H5''" H N N 132 DPB HOP2 H N N 133 DPB HOP3 H N N 134 GLN N N N N 135 GLN CA C N S 136 GLN C C N N 137 GLN O O N N 138 GLN CB C N N 139 GLN CG C N N 140 GLN CD C N N 141 GLN OE1 O N N 142 GLN NE2 N N N 143 GLN OXT O N N 144 GLN H H N N 145 GLN H2 H N N 146 GLN HA H N N 147 GLN HB2 H N N 148 GLN HB3 H N N 149 GLN HG2 H N N 150 GLN HG3 H N N 151 GLN HE21 H N N 152 GLN HE22 H N N 153 GLN HXT H N N 154 GLU N N N N 155 GLU CA C N S 156 GLU C C N N 157 GLU O O N N 158 GLU CB C N N 159 GLU CG C N N 160 GLU CD C N N 161 GLU OE1 O N N 162 GLU OE2 O N N 163 GLU OXT O N N 164 GLU H H N N 165 GLU H2 H N N 166 GLU HA H N N 167 GLU HB2 H N N 168 GLU HB3 H N N 169 GLU HG2 H N N 170 GLU HG3 H N N 171 GLU HE2 H N N 172 GLU HXT H N N 173 GLY N N N N 174 GLY CA C N N 175 GLY C C N N 176 GLY O O N N 177 GLY OXT O N N 178 GLY H H N N 179 GLY H2 H N N 180 GLY HA2 H N N 181 GLY HA3 H N N 182 GLY HXT H N N 183 HIS N N N N 184 HIS CA C N S 185 HIS C C N N 186 HIS O O N N 187 HIS CB C N N 188 HIS CG C Y N 189 HIS ND1 N Y N 190 HIS CD2 C Y N 191 HIS CE1 C Y N 192 HIS NE2 N Y N 193 HIS OXT O N N 194 HIS H H N N 195 HIS H2 H N N 196 HIS HA H N N 197 HIS HB2 H N N 198 HIS HB3 H N N 199 HIS HD1 H N N 200 HIS HD2 H N N 201 HIS HE1 H N N 202 HIS HE2 H N N 203 HIS HXT H N N 204 HOH O O N N 205 HOH H1 H N N 206 HOH H2 H N N 207 ILE N N N N 208 ILE CA C N S 209 ILE C C N N 210 ILE O O N N 211 ILE CB C N S 212 ILE CG1 C N N 213 ILE CG2 C N N 214 ILE CD1 C N N 215 ILE OXT O N N 216 ILE H H N N 217 ILE H2 H N N 218 ILE HA H N N 219 ILE HB H N N 220 ILE HG12 H N N 221 ILE HG13 H N N 222 ILE HG21 H N N 223 ILE HG22 H N N 224 ILE HG23 H N N 225 ILE HD11 H N N 226 ILE HD12 H N N 227 ILE HD13 H N N 228 ILE HXT H N N 229 LEU N N N N 230 LEU CA C N S 231 LEU C C N N 232 LEU O O N N 233 LEU CB C N N 234 LEU CG C N N 235 LEU CD1 C N N 236 LEU CD2 C N N 237 LEU OXT O N N 238 LEU H H N N 239 LEU H2 H N N 240 LEU HA H N N 241 LEU HB2 H N N 242 LEU HB3 H N N 243 LEU HG H N N 244 LEU HD11 H N N 245 LEU HD12 H N N 246 LEU HD13 H N N 247 LEU HD21 H N N 248 LEU HD22 H N N 249 LEU HD23 H N N 250 LEU HXT H N N 251 LYS N N N N 252 LYS CA C N S 253 LYS C C N N 254 LYS O O N N 255 LYS CB C N N 256 LYS CG C N N 257 LYS CD C N N 258 LYS CE C N N 259 LYS NZ N N N 260 LYS OXT O N N 261 LYS H H N N 262 LYS H2 H N N 263 LYS HA H N N 264 LYS HB2 H N N 265 LYS HB3 H N N 266 LYS HG2 H N N 267 LYS HG3 H N N 268 LYS HD2 H N N 269 LYS HD3 H N N 270 LYS HE2 H N N 271 LYS HE3 H N N 272 LYS HZ1 H N N 273 LYS HZ2 H N N 274 LYS HZ3 H N N 275 LYS HXT H N N 276 MET N N N N 277 MET CA C N S 278 MET C C N N 279 MET O O N N 280 MET CB C N N 281 MET CG C N N 282 MET SD S N N 283 MET CE C N N 284 MET OXT O N N 285 MET H H N N 286 MET H2 H N N 287 MET HA H N N 288 MET HB2 H N N 289 MET HB3 H N N 290 MET HG2 H N N 291 MET HG3 H N N 292 MET HE1 H N N 293 MET HE2 H N N 294 MET HE3 H N N 295 MET HXT H N N 296 MG MG MG N N 297 PHE N N N N 298 PHE CA C N S 299 PHE C C N N 300 PHE O O N N 301 PHE CB C N N 302 PHE CG C Y N 303 PHE CD1 C Y N 304 PHE CD2 C Y N 305 PHE CE1 C Y N 306 PHE CE2 C Y N 307 PHE CZ C Y N 308 PHE OXT O N N 309 PHE H H N N 310 PHE H2 H N N 311 PHE HA H N N 312 PHE HB2 H N N 313 PHE HB3 H N N 314 PHE HD1 H N N 315 PHE HD2 H N N 316 PHE HE1 H N N 317 PHE HE2 H N N 318 PHE HZ H N N 319 PHE HXT H N N 320 PO4 P P N N 321 PO4 O1 O N N 322 PO4 O2 O N N 323 PO4 O3 O N N 324 PO4 O4 O N N 325 PRO N N N N 326 PRO CA C N S 327 PRO C C N N 328 PRO O O N N 329 PRO CB C N N 330 PRO CG C N N 331 PRO CD C N N 332 PRO OXT O N N 333 PRO H H N N 334 PRO HA H N N 335 PRO HB2 H N N 336 PRO HB3 H N N 337 PRO HG2 H N N 338 PRO HG3 H N N 339 PRO HD2 H N N 340 PRO HD3 H N N 341 PRO HXT H N N 342 SER N N N N 343 SER CA C N S 344 SER C C N N 345 SER O O N N 346 SER CB C N N 347 SER OG O N N 348 SER OXT O N N 349 SER H H N N 350 SER H2 H N N 351 SER HA H N N 352 SER HB2 H N N 353 SER HB3 H N N 354 SER HG H N N 355 SER HXT H N N 356 THR N N N N 357 THR CA C N S 358 THR C C N N 359 THR O O N N 360 THR CB C N R 361 THR OG1 O N N 362 THR CG2 C N N 363 THR OXT O N N 364 THR H H N N 365 THR H2 H N N 366 THR HA H N N 367 THR HB H N N 368 THR HG1 H N N 369 THR HG21 H N N 370 THR HG22 H N N 371 THR HG23 H N N 372 THR HXT H N N 373 TRP N N N N 374 TRP CA C N S 375 TRP C C N N 376 TRP O O N N 377 TRP CB C N N 378 TRP CG C Y N 379 TRP CD1 C Y N 380 TRP CD2 C Y N 381 TRP NE1 N Y N 382 TRP CE2 C Y N 383 TRP CE3 C Y N 384 TRP CZ2 C Y N 385 TRP CZ3 C Y N 386 TRP CH2 C Y N 387 TRP OXT O N N 388 TRP H H N N 389 TRP H2 H N N 390 TRP HA H N N 391 TRP HB2 H N N 392 TRP HB3 H N N 393 TRP HD1 H N N 394 TRP HE1 H N N 395 TRP HE3 H N N 396 TRP HZ2 H N N 397 TRP HZ3 H N N 398 TRP HH2 H N N 399 TRP HXT H N N 400 TYR N N N N 401 TYR CA C N S 402 TYR C C N N 403 TYR O O N N 404 TYR CB C N N 405 TYR CG C Y N 406 TYR CD1 C Y N 407 TYR CD2 C Y N 408 TYR CE1 C Y N 409 TYR CE2 C Y N 410 TYR CZ C Y N 411 TYR OH O N N 412 TYR OXT O N N 413 TYR H H N N 414 TYR H2 H N N 415 TYR HA H N N 416 TYR HB2 H N N 417 TYR HB3 H N N 418 TYR HD1 H N N 419 TYR HD2 H N N 420 TYR HE1 H N N 421 TYR HE2 H N N 422 TYR HH H N N 423 TYR HXT H N N 424 VAL N N N N 425 VAL CA C N S 426 VAL C C N N 427 VAL O O N N 428 VAL CB C N N 429 VAL CG1 C N N 430 VAL CG2 C N N 431 VAL OXT O N N 432 VAL H H N N 433 VAL H2 H N N 434 VAL HA H N N 435 VAL HB H N N 436 VAL HG11 H N N 437 VAL HG12 H N N 438 VAL HG13 H N N 439 VAL HG21 H N N 440 VAL HG22 H N N 441 VAL HG23 H N N 442 VAL HXT H N N 443 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DPB C11 C12 doub Y N 83 DPB C11 C10 sing Y N 84 DPB C11 H11 sing N N 85 DPB C12 C7 sing Y N 86 DPB C12 H12 sing N N 87 DPB C7 C8 doub Y N 88 DPB C7 "C6'" sing N N 89 DPB C8 C9 sing Y N 90 DPB C8 H8 sing N N 91 DPB C9 C10 doub Y N 92 DPB C9 H9 sing N N 93 DPB C10 H10 sing N N 94 DPB C2 N1 sing N N 95 DPB C2 N3 sing N N 96 DPB C2 O2 doub N N 97 DPB N1 C6 sing N N 98 DPB N1 "C1'" sing N N 99 DPB C6 C5 doub N N 100 DPB C6 H6 sing N N 101 DPB C5 C4 sing N N 102 DPB C5 C5M sing N N 103 DPB C4 N3 sing N N 104 DPB C4 O4 doub N N 105 DPB N3 H3 sing N N 106 DPB C5M H71 sing N N 107 DPB C5M H72 sing N N 108 DPB C5M H73 sing N N 109 DPB "C1'" "O4'" sing N N 110 DPB "C1'" "C2'" sing N N 111 DPB "C1'" "H1'" sing N N 112 DPB "O4'" "C4'" sing N N 113 DPB "C4'" "C3'" sing N N 114 DPB "C4'" "C5'" sing N N 115 DPB "C4'" "H4'" sing N N 116 DPB "C3'" "C2'" sing N N 117 DPB "C3'" "O3'" sing N N 118 DPB "C3'" "H3'" sing N N 119 DPB "C2'" "H2'" sing N N 120 DPB "C2'" "H2''" sing N N 121 DPB "C5'" "O5'" sing N N 122 DPB "C5'" "H5'" sing N N 123 DPB "C5'" "H5''" sing N N 124 DPB "O5'" "C6'" sing N N 125 DPB "C6'" "O3'" sing N N 126 DPB "C6'" P sing N N 127 DPB P OP2 sing N N 128 DPB P OP1 doub N N 129 DPB P OP3 sing N N 130 DPB OP2 HOP2 sing N N 131 DPB OP3 HOP3 sing N N 132 GLN N CA sing N N 133 GLN N H sing N N 134 GLN N H2 sing N N 135 GLN CA C sing N N 136 GLN CA CB sing N N 137 GLN CA HA sing N N 138 GLN C O doub N N 139 GLN C OXT sing N N 140 GLN CB CG sing N N 141 GLN CB HB2 sing N N 142 GLN CB HB3 sing N N 143 GLN CG CD sing N N 144 GLN CG HG2 sing N N 145 GLN CG HG3 sing N N 146 GLN CD OE1 doub N N 147 GLN CD NE2 sing N N 148 GLN NE2 HE21 sing N N 149 GLN NE2 HE22 sing N N 150 GLN OXT HXT sing N N 151 GLU N CA sing N N 152 GLU N H sing N N 153 GLU N H2 sing N N 154 GLU CA C sing N N 155 GLU CA CB sing N N 156 GLU CA HA sing N N 157 GLU C O doub N N 158 GLU C OXT sing N N 159 GLU CB CG sing N N 160 GLU CB HB2 sing N N 161 GLU CB HB3 sing N N 162 GLU CG CD sing N N 163 GLU CG HG2 sing N N 164 GLU CG HG3 sing N N 165 GLU CD OE1 doub N N 166 GLU CD OE2 sing N N 167 GLU OE2 HE2 sing N N 168 GLU OXT HXT sing N N 169 GLY N CA sing N N 170 GLY N H sing N N 171 GLY N H2 sing N N 172 GLY CA C sing N N 173 GLY CA HA2 sing N N 174 GLY CA HA3 sing N N 175 GLY C O doub N N 176 GLY C OXT sing N N 177 GLY OXT HXT sing N N 178 HIS N CA sing N N 179 HIS N H sing N N 180 HIS N H2 sing N N 181 HIS CA C sing N N 182 HIS CA CB sing N N 183 HIS CA HA sing N N 184 HIS C O doub N N 185 HIS C OXT sing N N 186 HIS CB CG sing N N 187 HIS CB HB2 sing N N 188 HIS CB HB3 sing N N 189 HIS CG ND1 sing Y N 190 HIS CG CD2 doub Y N 191 HIS ND1 CE1 doub Y N 192 HIS ND1 HD1 sing N N 193 HIS CD2 NE2 sing Y N 194 HIS CD2 HD2 sing N N 195 HIS CE1 NE2 sing Y N 196 HIS CE1 HE1 sing N N 197 HIS NE2 HE2 sing N N 198 HIS OXT HXT sing N N 199 HOH O H1 sing N N 200 HOH O H2 sing N N 201 ILE N CA sing N N 202 ILE N H sing N N 203 ILE N H2 sing N N 204 ILE CA C sing N N 205 ILE CA CB sing N N 206 ILE CA HA sing N N 207 ILE C O doub N N 208 ILE C OXT sing N N 209 ILE CB CG1 sing N N 210 ILE CB CG2 sing N N 211 ILE CB HB sing N N 212 ILE CG1 CD1 sing N N 213 ILE CG1 HG12 sing N N 214 ILE CG1 HG13 sing N N 215 ILE CG2 HG21 sing N N 216 ILE CG2 HG22 sing N N 217 ILE CG2 HG23 sing N N 218 ILE CD1 HD11 sing N N 219 ILE CD1 HD12 sing N N 220 ILE CD1 HD13 sing N N 221 ILE OXT HXT sing N N 222 LEU N CA sing N N 223 LEU N H sing N N 224 LEU N H2 sing N N 225 LEU CA C sing N N 226 LEU CA CB sing N N 227 LEU CA HA sing N N 228 LEU C O doub N N 229 LEU C OXT sing N N 230 LEU CB CG sing N N 231 LEU CB HB2 sing N N 232 LEU CB HB3 sing N N 233 LEU CG CD1 sing N N 234 LEU CG CD2 sing N N 235 LEU CG HG sing N N 236 LEU CD1 HD11 sing N N 237 LEU CD1 HD12 sing N N 238 LEU CD1 HD13 sing N N 239 LEU CD2 HD21 sing N N 240 LEU CD2 HD22 sing N N 241 LEU CD2 HD23 sing N N 242 LEU OXT HXT sing N N 243 LYS N CA sing N N 244 LYS N H sing N N 245 LYS N H2 sing N N 246 LYS CA C sing N N 247 LYS CA CB sing N N 248 LYS CA HA sing N N 249 LYS C O doub N N 250 LYS C OXT sing N N 251 LYS CB CG sing N N 252 LYS CB HB2 sing N N 253 LYS CB HB3 sing N N 254 LYS CG CD sing N N 255 LYS CG HG2 sing N N 256 LYS CG HG3 sing N N 257 LYS CD CE sing N N 258 LYS CD HD2 sing N N 259 LYS CD HD3 sing N N 260 LYS CE NZ sing N N 261 LYS CE HE2 sing N N 262 LYS CE HE3 sing N N 263 LYS NZ HZ1 sing N N 264 LYS NZ HZ2 sing N N 265 LYS NZ HZ3 sing N N 266 LYS OXT HXT sing N N 267 MET N CA sing N N 268 MET N H sing N N 269 MET N H2 sing N N 270 MET CA C sing N N 271 MET CA CB sing N N 272 MET CA HA sing N N 273 MET C O doub N N 274 MET C OXT sing N N 275 MET CB CG sing N N 276 MET CB HB2 sing N N 277 MET CB HB3 sing N N 278 MET CG SD sing N N 279 MET CG HG2 sing N N 280 MET CG HG3 sing N N 281 MET SD CE sing N N 282 MET CE HE1 sing N N 283 MET CE HE2 sing N N 284 MET CE HE3 sing N N 285 MET OXT HXT sing N N 286 PHE N CA sing N N 287 PHE N H sing N N 288 PHE N H2 sing N N 289 PHE CA C sing N N 290 PHE CA CB sing N N 291 PHE CA HA sing N N 292 PHE C O doub N N 293 PHE C OXT sing N N 294 PHE CB CG sing N N 295 PHE CB HB2 sing N N 296 PHE CB HB3 sing N N 297 PHE CG CD1 doub Y N 298 PHE CG CD2 sing Y N 299 PHE CD1 CE1 sing Y N 300 PHE CD1 HD1 sing N N 301 PHE CD2 CE2 doub Y N 302 PHE CD2 HD2 sing N N 303 PHE CE1 CZ doub Y N 304 PHE CE1 HE1 sing N N 305 PHE CE2 CZ sing Y N 306 PHE CE2 HE2 sing N N 307 PHE CZ HZ sing N N 308 PHE OXT HXT sing N N 309 PO4 P O1 doub N N 310 PO4 P O2 sing N N 311 PO4 P O3 sing N N 312 PO4 P O4 sing N N 313 PRO N CA sing N N 314 PRO N CD sing N N 315 PRO N H sing N N 316 PRO CA C sing N N 317 PRO CA CB sing N N 318 PRO CA HA sing N N 319 PRO C O doub N N 320 PRO C OXT sing N N 321 PRO CB CG sing N N 322 PRO CB HB2 sing N N 323 PRO CB HB3 sing N N 324 PRO CG CD sing N N 325 PRO CG HG2 sing N N 326 PRO CG HG3 sing N N 327 PRO CD HD2 sing N N 328 PRO CD HD3 sing N N 329 PRO OXT HXT sing N N 330 SER N CA sing N N 331 SER N H sing N N 332 SER N H2 sing N N 333 SER CA C sing N N 334 SER CA CB sing N N 335 SER CA HA sing N N 336 SER C O doub N N 337 SER C OXT sing N N 338 SER CB OG sing N N 339 SER CB HB2 sing N N 340 SER CB HB3 sing N N 341 SER OG HG sing N N 342 SER OXT HXT sing N N 343 THR N CA sing N N 344 THR N H sing N N 345 THR N H2 sing N N 346 THR CA C sing N N 347 THR CA CB sing N N 348 THR CA HA sing N N 349 THR C O doub N N 350 THR C OXT sing N N 351 THR CB OG1 sing N N 352 THR CB CG2 sing N N 353 THR CB HB sing N N 354 THR OG1 HG1 sing N N 355 THR CG2 HG21 sing N N 356 THR CG2 HG22 sing N N 357 THR CG2 HG23 sing N N 358 THR OXT HXT sing N N 359 TRP N CA sing N N 360 TRP N H sing N N 361 TRP N H2 sing N N 362 TRP CA C sing N N 363 TRP CA CB sing N N 364 TRP CA HA sing N N 365 TRP C O doub N N 366 TRP C OXT sing N N 367 TRP CB CG sing N N 368 TRP CB HB2 sing N N 369 TRP CB HB3 sing N N 370 TRP CG CD1 doub Y N 371 TRP CG CD2 sing Y N 372 TRP CD1 NE1 sing Y N 373 TRP CD1 HD1 sing N N 374 TRP CD2 CE2 doub Y N 375 TRP CD2 CE3 sing Y N 376 TRP NE1 CE2 sing Y N 377 TRP NE1 HE1 sing N N 378 TRP CE2 CZ2 sing Y N 379 TRP CE3 CZ3 doub Y N 380 TRP CE3 HE3 sing N N 381 TRP CZ2 CH2 doub Y N 382 TRP CZ2 HZ2 sing N N 383 TRP CZ3 CH2 sing Y N 384 TRP CZ3 HZ3 sing N N 385 TRP CH2 HH2 sing N N 386 TRP OXT HXT sing N N 387 TYR N CA sing N N 388 TYR N H sing N N 389 TYR N H2 sing N N 390 TYR CA C sing N N 391 TYR CA CB sing N N 392 TYR CA HA sing N N 393 TYR C O doub N N 394 TYR C OXT sing N N 395 TYR CB CG sing N N 396 TYR CB HB2 sing N N 397 TYR CB HB3 sing N N 398 TYR CG CD1 doub Y N 399 TYR CG CD2 sing Y N 400 TYR CD1 CE1 sing Y N 401 TYR CD1 HD1 sing N N 402 TYR CD2 CE2 doub Y N 403 TYR CD2 HD2 sing N N 404 TYR CE1 CZ doub Y N 405 TYR CE1 HE1 sing N N 406 TYR CE2 CZ sing Y N 407 TYR CE2 HE2 sing N N 408 TYR CZ OH sing N N 409 TYR OH HH sing N N 410 TYR OXT HXT sing N N 411 VAL N CA sing N N 412 VAL N H sing N N 413 VAL N H2 sing N N 414 VAL CA C sing N N 415 VAL CA CB sing N N 416 VAL CA HA sing N N 417 VAL C O doub N N 418 VAL C OXT sing N N 419 VAL CB CG1 sing N N 420 VAL CB CG2 sing N N 421 VAL CB HB sing N N 422 VAL CG1 HG11 sing N N 423 VAL CG1 HG12 sing N N 424 VAL CG1 HG13 sing N N 425 VAL CG2 HG21 sing N N 426 VAL CG2 HG22 sing N N 427 VAL CG2 HG23 sing N N 428 VAL OXT HXT sing N N 429 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PHOSPHATE ION' PO4 3 'MAGNESIUM ION' MG 4 "(S)-1-[2'-DEOXY-3',5'-O-(1-PHOSPHONO)BENZYLIDENE-B-D-THREO-PENTOFURANOSYL]THYMINE" DPB 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1MH9 _pdbx_initial_refinement_model.details 'pdb code 1MH9' #