data_1QA8 # _entry.id 1QA8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1QA8 RCSB RCSB009069 WWPDB D_1000009069 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2000-06-23 _pdbx_database_PDB_obs_spr.pdb_id 1GFW _pdbx_database_PDB_obs_spr.replace_pdb_id 1QA8 _pdbx_database_PDB_obs_spr.details ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1pau 'Crystal structure of the complex of apopain with the tetrapeptide aldehyde inhibitor AC-DEVD-CHO' unspecified PDB 1cp3 'Crystal structure of the complex of apopain with the tetrapeptide inhibitor AC- DVAD-FMC' unspecified # _pdbx_database_status.status_code OBS _pdbx_database_status.entry_id 1QA8 _pdbx_database_status.recvd_initial_deposition_date 1999-04-15 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Concha, N.O.' 1 'Janson, C.A.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Potent and selective nonpeptide inhibitors of caspases 3 and 7 which inhibit apoptosis and maintain cell functionality' 'To be Published' ? ? ? ? ? ? ? 0353 ? ? ? 1 ;CPP32, a novel human apoptotic protein with homology to Caenorhabditis elegans cell death protein ced-3 and mammalian interleukin-1-b-converting enzyme ; J.Biol.Chem. 269 30761 30764 1994 JBCHA3 US 0021-9258 0071 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Lee, D.' 1 primary 'Chan, G.' 2 primary 'Vaidya, K.S.' 3 primary 'Francis, T.A.' 4 primary 'Nadeau, D.P.' 5 primary 'Lark, M.W.' 6 primary 'Gowen, M.' 7 primary 'Kikly, K.' 8 primary 'Winkler, J.D.' 9 primary 'Sung, C.-M.' 10 primary 'Long, S.A.' 11 primary 'Adams, J.L.' 12 primary 'Debouck, C.' 13 primary 'Richardson, S.' 14 primary 'Levy, M.A.' 15 primary 'DeWolf, W.E.' 16 primary Jr. 17 primary 'Keller, P.M.' 18 primary 'Tomaszek, T.' 19 primary 'Head, M.S.' 20 primary 'Ryan, M.D.' 21 primary 'Haltiwanger, R.C.' 22 primary 'Liang, P.-H.' 23 primary 'Janson, C.A.' 24 primary 'McDevitt, P.J.' 25 primary 'Johanson, K.' 26 primary 'Concha, N.O.' 27 primary 'Chan, W.' 28 primary 'Abdel-Meguid, S.S.' 29 primary 'Nuttall, M.E.' 30 1 'Fernandes-Alnemri, T.' 31 1 'Litwack, G.' 32 1 'Alnemri, E.S.' 33 # _cell.entry_id 1QA8 _cell.length_a 67.200 _cell.length_b 83.300 _cell.length_c 96.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1QA8 _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CASPASE-3 (APOPAIN, P20)' 16423.709 1 ? ? 'ACTIVATED MATURE CASPASE-3 (P20) WITHOUT PRO-DOMAIN OR LINKER (RESIDUES 29-175)' ? 2 polymer man 'CASPASE-3 (APOPAIN, P10)' 11002.637 1 ? ? 'ACTIVATED MATURE CASPASE-3 (P10) WITHOUT PRO-DOMAIN OR LINKER (RESIDUES 181-277)' ? 3 non-polymer syn '1-METHYL-5-(2-PHENOXYMETHYL-PYRROLIDINE-1-SULFONYL)-1H-INDOLE-2,3-DIONE' 400.448 1 ? ? ? ? 4 water nat water 18.015 45 ? ? ? ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 GLY n 1 3 ILE n 1 4 SER n 1 5 LEU n 1 6 ASP n 1 7 ASN n 1 8 SER n 1 9 TYR n 1 10 LYS n 1 11 MET n 1 12 ASP n 1 13 TYR n 1 14 PRO n 1 15 GLU n 1 16 MET n 1 17 GLY n 1 18 LEU n 1 19 CYS n 1 20 ILE n 1 21 ILE n 1 22 ILE n 1 23 ASN n 1 24 ASN n 1 25 LYS n 1 26 ASN n 1 27 PHE n 1 28 HIS n 1 29 LYS n 1 30 SER n 1 31 THR n 1 32 GLY n 1 33 MET n 1 34 THR n 1 35 SER n 1 36 ARG n 1 37 SER n 1 38 GLY n 1 39 THR n 1 40 ASP n 1 41 VAL n 1 42 ASP n 1 43 ALA n 1 44 ALA n 1 45 ASN n 1 46 LEU n 1 47 ARG n 1 48 GLU n 1 49 THR n 1 50 PHE n 1 51 ARG n 1 52 ASN n 1 53 LEU n 1 54 LYS n 1 55 TYR n 1 56 GLU n 1 57 VAL n 1 58 ARG n 1 59 ASN n 1 60 LYS n 1 61 ASN n 1 62 ASP n 1 63 LEU n 1 64 THR n 1 65 ARG n 1 66 GLU n 1 67 GLU n 1 68 ILE n 1 69 VAL n 1 70 GLU n 1 71 LEU n 1 72 MET n 1 73 ARG n 1 74 ASP n 1 75 VAL n 1 76 SER n 1 77 LYS n 1 78 GLU n 1 79 ASP n 1 80 HIS n 1 81 SER n 1 82 LYS n 1 83 ARG n 1 84 SER n 1 85 SER n 1 86 PHE n 1 87 VAL n 1 88 CYS n 1 89 VAL n 1 90 LEU n 1 91 LEU n 1 92 SER n 1 93 HIS n 1 94 GLY n 1 95 GLU n 1 96 GLU n 1 97 GLY n 1 98 ILE n 1 99 ILE n 1 100 PHE n 1 101 GLY n 1 102 THR n 1 103 ASN n 1 104 GLY n 1 105 PRO n 1 106 VAL n 1 107 ASP n 1 108 LEU n 1 109 LYS n 1 110 LYS n 1 111 ILE n 1 112 THR n 1 113 ASN n 1 114 PHE n 1 115 PHE n 1 116 ARG n 1 117 GLY n 1 118 ASP n 1 119 ARG n 1 120 CYS n 1 121 ARG n 1 122 SER n 1 123 LEU n 1 124 THR n 1 125 GLY n 1 126 LYS n 1 127 PRO n 1 128 LYS n 1 129 LEU n 1 130 PHE n 1 131 ILE n 1 132 ILE n 1 133 GLN n 1 134 ALA n 1 135 CYS n 1 136 ARG n 1 137 GLY n 1 138 THR n 1 139 GLU n 1 140 LEU n 1 141 ASP n 1 142 CYS n 1 143 GLY n 1 144 ILE n 1 145 GLU n 2 1 HIS n 2 2 LYS n 2 3 ILE n 2 4 PRO n 2 5 VAL n 2 6 ASP n 2 7 ALA n 2 8 ASP n 2 9 PHE n 2 10 LEU n 2 11 TYR n 2 12 ALA n 2 13 TYR n 2 14 SER n 2 15 THR n 2 16 ALA n 2 17 PRO n 2 18 GLY n 2 19 TYR n 2 20 TYR n 2 21 SER n 2 22 TRP n 2 23 ARG n 2 24 ASN n 2 25 SER n 2 26 LYS n 2 27 ASP n 2 28 GLY n 2 29 SER n 2 30 TRP n 2 31 PHE n 2 32 ILE n 2 33 GLN n 2 34 SER n 2 35 LEU n 2 36 CYS n 2 37 ALA n 2 38 MET n 2 39 LEU n 2 40 LYS n 2 41 GLN n 2 42 TYR n 2 43 ALA n 2 44 ASP n 2 45 LYS n 2 46 LEU n 2 47 GLU n 2 48 PHE n 2 49 MET n 2 50 HIS n 2 51 ILE n 2 52 LEU n 2 53 THR n 2 54 ARG n 2 55 VAL n 2 56 ASN n 2 57 ARG n 2 58 LYS n 2 59 VAL n 2 60 ALA n 2 61 THR n 2 62 GLU n 2 63 PHE n 2 64 GLU n 2 65 SER n 2 66 PHE n 2 67 SER n 2 68 PHE n 2 69 ASP n 2 70 ALA n 2 71 THR n 2 72 PHE n 2 73 HIS n 2 74 ALA n 2 75 LYS n 2 76 LYS n 2 77 GLN n 2 78 ILE n 2 79 PRO n 2 80 CYS n 2 81 ILE n 2 82 VAL n 2 83 SER n 2 84 MET n 2 85 LEU n 2 86 THR n 2 87 LYS n 2 88 GLU n 2 89 LEU n 2 90 TYR n 2 91 PHE n 2 92 TYR n 2 93 HIS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? human ? ? ? ? ? ? ? ? 'HOMO SAPIENS' ? ? ? ? ? ? ? ? ? 'E. COLI' ? ? ? ? ? ? ? 'BL21 (DE3)' ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? human ? ? ? ? ? ? ? ? 'HOMO SAPIENS' ? ? ? ? ? ? ? ? ? 'E. COLI' ? ? ? ? ? ? ? 'BL21 (DE3)' ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name 'HUMAN (HOMO SAPIENSE)' _entity_src_nat.pdbx_organism_scientific ? _entity_src_nat.pdbx_ncbi_taxonomy_id ? _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details 'HUMAN T-LYMPHOCYTE CELL LINE JURKAT' # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'isatin sulfonamide inhibitor: (S)-(+)-1-methyl-5-[1-(2-(phenoxymethyl) pyrrolidinyl)sulfonyl]isatin' # _struct_ref.id 1 _struct_ref.db_name SWS _struct_ref.db_code ICE3_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1QA8 A 1 ? 147 ? P42574 29 ? 175 ? 29 175 2 1 1QA8 B 1 ? 93 ? P42574 181 ? 277 ? 181 277 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSI non-polymer . '1-METHYL-5-(2-PHENOXYMETHYL-PYRROLIDINE-1-SULFONYL)-1H-INDOLE-2,3-DIONE' ? 'C20 H20 N2 O5 S' 400.448 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1QA8 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.45 _exptl_crystal.density_percent_sol 49.78 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details 20-21C _exptl_crystal_grow.pH 5.9 _exptl_crystal_grow.pdbx_details ;4 ul hanging drops were prepared by mixing equal volumes of protein (10 mg/ml in 20 mM HEPES, pH 7.0) and reservoir solution. The drops equilibrated against 500 ul of 15-18% PEG6000, 0.1M sodium citrate, pH 5.9, 20 mM L-cysteine, and 5% glycerol., VAPOR DIFFUSION, HANGING DROP, temperature 293K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'QUANTUM-4 (ADSC)' _diffrn_detector.pdbx_collection_date 1998-01-30 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.100 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X12B' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X12B _diffrn_source.pdbx_wavelength 1.100 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1QA8 _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 2.8 _reflns.number_obs 6775 _reflns.number_all 7014 _reflns.percent_possible_obs 96.6 _reflns.pdbx_Rmerge_I_obs 0.174 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI 4.3 _reflns.B_iso_Wilson_estimate 47.0 _reflns.pdbx_redundancy 4.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_netI_over_sigmaI ? # _reflns_shell.d_res_high 2.8 _reflns_shell.d_res_low 2.9 _reflns_shell.percent_possible_all 82.4 _reflns_shell.Rmerge_I_obs 0.267 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 3.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 692 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1QA8 _refine.ls_number_reflns_obs 6386 _refine.ls_number_reflns_all 7014 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF 1413969.37 _refine.pdbx_data_cutoff_low_absF 0.0 _refine.ls_d_res_low 40.0 _refine.ls_d_res_high 2.8 _refine.ls_percent_reflns_obs 92.3 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.216 _refine.ls_R_factor_R_free 0.282 _refine.ls_R_factor_R_free_error 0.011 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.8 _refine.ls_number_reflns_R_free 687 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 33.276 _refine.solvent_model_param_bsol 0.363132 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;Data collection proceeded in the presence of "ice-rings" ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'see Engh & Huber (1991) Acta Cryst A 47, 392-400.' _refine.pdbx_stereochem_target_val_spec_case ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1QA8 _refine_analyze.Luzzati_coordinate_error_obs 0.32 _refine_analyze.Luzzati_sigma_a_obs 0.42 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.43 _refine_analyze.Luzzati_sigma_a_free 0.44 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1923 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 28 _refine_hist.number_atoms_solvent 45 _refine_hist.number_atoms_total 1996 _refine_hist.d_res_high 2.8 _refine_hist.d_res_low 40.0 _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.013 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.7 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 25.0 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.89 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.56 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.50 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 2.29 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.25 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.80 _refine_ls_shell.d_res_low 2.9 _refine_ls_shell.number_reflns_R_work 824 _refine_ls_shell.R_factor_R_work 0.28 _refine_ls_shell.percent_reflns_obs 80.4 _refine_ls_shell.R_factor_R_free 0.345 _refine_ls_shell.R_factor_R_free_error 0.038 _refine_ls_shell.percent_reflns_R_free 9.3 _refine_ls_shell.number_reflns_R_free 84 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.topol_file _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.pdbx_refine_id protein.top 1 protein_rep.param 'X-RAY DIFFRACTION' 277.top 2 protein_rep.param 'X-RAY DIFFRACTION' water.top 3 water_rep.param 'X-RAY DIFFRACTION' # _struct.entry_id 1QA8 _struct.title 'THE 2.8 ANGSTROM CRYSTAL STRUCTURE OF CASPASE-3 (APOPAIN OR CPP32)IN COMPLEX WITH AN ISATIN SULFONAMIDE INHIBITOR.' _struct.pdbx_descriptor 'CASPASE-3 (APOPAIN OR CPP32)IN COMPLEX WITH AN ISATIN SULFONAMIDE INHIBITOR.' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1QA8 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'CASPASE INHIBITOR, CASPASE-3, APOPAIN, ISTIN SULFONAMIDE, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ;The caspase-3 molecule in complex with the isatin inhibitor forms hetero tetramer, 2x(p20/p10). The hetero-tetramer is formed by a crystallographic 2-fold symmetry operation on the hetero dimer, p20/p10, in the asymmetric unit. ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 HIS A 28 ? GLY A 32 ? HIS A 56 GLY A 60 5 ? 5 HELX_P HELX_P2 2 GLY A 38 ? LEU A 53 ? GLY A 66 LEU A 81 1 ? 16 HELX_P HELX_P3 3 THR A 64 ? GLU A 78 ? THR A 92 GLU A 106 1 ? 15 HELX_P HELX_P4 4 LEU A 108 ? ASN A 113 ? LEU A 136 ASN A 141 1 ? 6 HELX_P HELX_P5 5 PHE A 114 ? ARG A 116 ? PHE A 142 ARG A 144 5 ? 3 HELX_P HELX_P6 6 CYS A 120 ? THR A 124 ? CYS A 148 THR A 152 5 ? 5 HELX_P HELX_P7 7 TRP B 30 ? ALA B 43 ? TRP B 214 ALA B 227 1 ? 14 HELX_P HELX_P8 8 GLU B 47 ? PHE B 63 ? GLU B 231 PHE B 247 1 ? 17 HELX_P HELX_P9 9 ASP B 69 ? HIS B 73 ? ASP B 253 HIS B 257 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 3 ? C ? 2 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 56 ? ASN A 61 ? GLU A 84 ASN A 89 A 2 LEU A 18 ? ASN A 23 ? LEU A 46 ASN A 51 A 3 PHE A 86 ? LEU A 91 ? PHE A 114 LEU A 119 A 4 LYS A 128 ? GLN A 133 ? LYS A 156 GLN A 161 A 5 PHE B 9 ? TYR B 13 ? PHE B 193 TYR B 197 A 6 CYS B 80 ? SER B 83 ? CYS B 264 SER B 267 B 1 GLY A 94 ? GLU A 95 ? GLY A 122 GLU A 123 B 2 ILE A 98 ? PHE A 100 ? ILE A 126 PHE A 128 B 3 PRO A 105 ? ASP A 107 ? PRO A 133 ASP A 135 C 1 GLY A 137 ? GLU A 139 ? GLY A 165 GLU A 167 C 2 GLY B 18 ? TYR B 19 ? GLY B 202 TYR B 203 D 1 ARG B 23 ? ASN B 24 ? ARG B 207 ASN B 208 D 2 GLY B 28 ? SER B 29 ? GLY B 212 SER B 213 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 58 ? N ARG A 86 O CYS A 19 ? O CYS A 47 A 2 3 N ILE A 20 ? N ILE A 48 O VAL A 87 ? O VAL A 115 A 3 4 O PHE A 86 ? O PHE A 114 N LEU A 129 ? N LEU A 157 A 4 5 N PHE A 130 ? N PHE A 158 O LEU B 10 ? O LEU B 194 A 5 6 O TYR B 13 ? O TYR B 197 N CYS B 80 ? N CYS B 264 B 1 2 O GLU A 95 ? O GLU A 123 N ILE A 98 ? N ILE A 126 B 2 3 N ILE A 99 ? N ILE A 127 O VAL A 106 ? O VAL A 134 C 1 2 N GLU A 139 ? N GLU A 167 O GLY B 18 ? O GLY B 202 D 1 2 N ASN B 24 ? N ASN B 208 O GLY B 28 ? O GLY B 212 # _database_PDB_matrix.entry_id 1QA8 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1QA8 _atom_sites.fract_transf_matrix[1][1] 0.014881 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012005 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010417 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 29 -99999 SER SER A . n A 1 2 GLY 2 30 -99999 GLY GLY A . n A 1 3 ILE 3 31 -99999 ILE ILE A . n A 1 4 SER 4 32 -99999 SER SER A . n A 1 5 LEU 5 33 -99999 LEU LEU A . n A 1 6 ASP 6 34 -99999 ASP ASP A . n A 1 7 ASN 7 35 -99999 ASN ASN A . n A 1 8 SER 8 36 -99999 SER SER A . n A 1 9 TYR 9 37 -99999 TYR TYR A . n A 1 10 LYS 10 38 -99999 LYS LYS A . n A 1 11 MET 11 39 -99999 MET MET A . n A 1 12 ASP 12 40 -99999 ASP ASP A . n A 1 13 TYR 13 41 -99999 TYR TYR A . n A 1 14 PRO 14 42 -99999 PRO PRO A . n A 1 15 GLU 15 43 -99999 GLU GLU A . n A 1 16 MET 16 44 -99999 MET MET A . n A 1 17 GLY 17 45 -99999 GLY GLY A . n A 1 18 LEU 18 46 -99999 LEU LEU A . n A 1 19 CYS 19 47 -99999 CYS CYS A . n A 1 20 ILE 20 48 -99999 ILE ILE A . n A 1 21 ILE 21 49 -99999 ILE ILE A . n A 1 22 ILE 22 50 -99999 ILE ILE A . n A 1 23 ASN 23 51 -99999 ASN ASN A . n A 1 24 ASN 24 52 -99999 ASN ASN A . n A 1 25 LYS 25 53 -99999 LYS LYS A . n A 1 26 ASN 26 54 -99999 ASN ASN A . n A 1 27 PHE 27 55 -99999 PHE PHE A . n A 1 28 HIS 28 56 -99999 HIS HIS A . n A 1 29 LYS 29 57 -99999 LYS LYS A . n A 1 30 SER 30 58 -99999 SER SER A . n A 1 31 THR 31 59 -99999 THR THR A . n A 1 32 GLY 32 60 -99999 GLY GLY A . n A 1 33 MET 33 61 -99999 MET MET A . n A 1 34 THR 34 62 -99999 THR THR A . n A 1 35 SER 35 63 -99999 SER SER A . n A 1 36 ARG 36 64 -99999 ARG ARG A . n A 1 37 SER 37 65 -99999 SER SER A . n A 1 38 GLY 38 66 -99999 GLY GLY A . n A 1 39 THR 39 67 -99999 THR THR A . n A 1 40 ASP 40 68 -99999 ASP ASP A . n A 1 41 VAL 41 69 -99999 VAL VAL A . n A 1 42 ASP 42 70 -99999 ASP ASP A . n A 1 43 ALA 43 71 -99999 ALA ALA A . n A 1 44 ALA 44 72 -99999 ALA ALA A . n A 1 45 ASN 45 73 -99999 ASN ASN A . n A 1 46 LEU 46 74 -99999 LEU LEU A . n A 1 47 ARG 47 75 -99999 ARG ARG A . n A 1 48 GLU 48 76 -99999 GLU GLU A . n A 1 49 THR 49 77 -99999 THR THR A . n A 1 50 PHE 50 78 -99999 PHE PHE A . n A 1 51 ARG 51 79 -99999 ARG ARG A . n A 1 52 ASN 52 80 -99999 ASN ASN A . n A 1 53 LEU 53 81 -99999 LEU LEU A . n A 1 54 LYS 54 82 -99999 LYS LYS A . n A 1 55 TYR 55 83 -99999 TYR TYR A . n A 1 56 GLU 56 84 -99999 GLU GLU A . n A 1 57 VAL 57 85 -99999 VAL VAL A . n A 1 58 ARG 58 86 -99999 ARG ARG A . n A 1 59 ASN 59 87 -99999 ASN ASN A . n A 1 60 LYS 60 88 -99999 LYS LYS A . n A 1 61 ASN 61 89 -99999 ASN ASN A . n A 1 62 ASP 62 90 -99999 ASP ASP A . n A 1 63 LEU 63 91 -99999 LEU LEU A . n A 1 64 THR 64 92 -99999 THR THR A . n A 1 65 ARG 65 93 -99999 ARG ARG A . n A 1 66 GLU 66 94 -99999 GLU GLU A . n A 1 67 GLU 67 95 -99999 GLU GLU A . n A 1 68 ILE 68 96 -99999 ILE ILE A . n A 1 69 VAL 69 97 -99999 VAL VAL A . n A 1 70 GLU 70 98 -99999 GLU GLU A . n A 1 71 LEU 71 99 -99999 LEU LEU A . n A 1 72 MET 72 100 -99999 MET MET A . n A 1 73 ARG 73 101 -99999 ARG ARG A . n A 1 74 ASP 74 102 -99999 ASP ASP A . n A 1 75 VAL 75 103 -99999 VAL VAL A . n A 1 76 SER 76 104 -99999 SER SER A . n A 1 77 LYS 77 105 -99999 LYS LYS A . n A 1 78 GLU 78 106 -99999 GLU GLU A . n A 1 79 ASP 79 107 -99999 ASP ASP A . n A 1 80 HIS 80 108 -99999 HIS HIS A . n A 1 81 SER 81 109 -99999 SER SER A . n A 1 82 LYS 82 110 -99999 LYS LYS A . n A 1 83 ARG 83 111 -99999 ARG ARG A . n A 1 84 SER 84 112 -99999 SER SER A . n A 1 85 SER 85 113 -99999 SER SER A . n A 1 86 PHE 86 114 -99999 PHE PHE A . n A 1 87 VAL 87 115 -99999 VAL VAL A . n A 1 88 CYS 88 116 -99999 CYS CYS A . n A 1 89 VAL 89 117 -99999 VAL VAL A . n A 1 90 LEU 90 118 -99999 LEU LEU A . n A 1 91 LEU 91 119 -99999 LEU LEU A . n A 1 92 SER 92 120 -99999 SER SER A . n A 1 93 HIS 93 121 -99999 HIS HIS A . n A 1 94 GLY 94 122 -99999 GLY GLY A . n A 1 95 GLU 95 123 -99999 GLU GLU A . n A 1 96 GLU 96 124 -99999 GLU GLU A . n A 1 97 GLY 97 125 -99999 GLY GLY A . n A 1 98 ILE 98 126 -99999 ILE ILE A . n A 1 99 ILE 99 127 -99999 ILE ILE A . n A 1 100 PHE 100 128 -99999 PHE PHE A . n A 1 101 GLY 101 129 -99999 GLY GLY A . n A 1 102 THR 102 130 -99999 THR THR A . n A 1 103 ASN 103 131 -99999 ASN ASN A . n A 1 104 GLY 104 132 -99999 GLY GLY A . n A 1 105 PRO 105 133 -99999 PRO PRO A . n A 1 106 VAL 106 134 -99999 VAL VAL A . n A 1 107 ASP 107 135 -99999 ASP ASP A . n A 1 108 LEU 108 136 -99999 LEU LEU A . n A 1 109 LYS 109 137 -99999 LYS LYS A . n A 1 110 LYS 110 138 -99999 LYS LYS A . n A 1 111 ILE 111 139 -99999 ILE ILE A . n A 1 112 THR 112 140 -99999 THR THR A . n A 1 113 ASN 113 141 -99999 ASN ASN A . n A 1 114 PHE 114 142 -99999 PHE PHE A . n A 1 115 PHE 115 143 -99999 PHE PHE A . n A 1 116 ARG 116 144 -99999 ARG ARG A . n A 1 117 GLY 117 145 -99999 GLY GLY A . n A 1 118 ASP 118 146 -99999 ASP ASP A . n A 1 119 ARG 119 147 -99999 ARG ARG A . n A 1 120 CYS 120 148 -99999 CYS CYS A . n A 1 121 ARG 121 149 -99999 ARG ARG A . n A 1 122 SER 122 150 -99999 SER SER A . n A 1 123 LEU 123 151 -99999 LEU LEU A . n A 1 124 THR 124 152 -99999 THR THR A . n A 1 125 GLY 125 153 -99999 GLY GLY A . n A 1 126 LYS 126 154 -99999 LYS LYS A . n A 1 127 PRO 127 155 -99999 PRO PRO A . n A 1 128 LYS 128 156 -99999 LYS LYS A . n A 1 129 LEU 129 157 -99999 LEU LEU A . n A 1 130 PHE 130 158 -99999 PHE PHE A . n A 1 131 ILE 131 159 -99999 ILE ILE A . n A 1 132 ILE 132 160 -99999 ILE ILE A . n A 1 133 GLN 133 161 -99999 GLN GLN A . n A 1 134 ALA 134 162 -99999 ALA ALA A . n A 1 135 CYS 135 163 -99999 CYS CYS A . n A 1 136 ARG 136 164 -99999 ARG ARG A . n A 1 137 GLY 137 165 -99999 GLY GLY A . n A 1 138 THR 138 166 -99999 THR THR A . n A 1 139 GLU 139 167 -99999 GLU GLU A . n A 1 140 LEU 140 168 -99999 LEU LEU A . n A 1 141 ASP 141 169 -99999 ASP ASP A . n A 1 142 CYS 142 170 -99999 CYS CYS A . n A 1 143 GLY 143 171 -99999 GLY GLY A . n A 1 144 ILE 144 172 -99999 ILE ILE A . n A 1 145 GLU 145 173 -99999 GLU GLU A . n B 2 1 HIS 1 185 -99999 HIS HIS B . n B 2 2 LYS 2 186 -99999 LYS LYS B . n B 2 3 ILE 3 187 -99999 ILE ILE B . n B 2 4 PRO 4 188 -99999 PRO PRO B . n B 2 5 VAL 5 189 -99999 VAL VAL B . n B 2 6 ASP 6 190 -99999 ASP ASP B . n B 2 7 ALA 7 191 -99999 ALA ALA B . n B 2 8 ASP 8 192 -99999 ASP ASP B . n B 2 9 PHE 9 193 -99999 PHE PHE B . n B 2 10 LEU 10 194 -99999 LEU LEU B . n B 2 11 TYR 11 195 -99999 TYR TYR B . n B 2 12 ALA 12 196 -99999 ALA ALA B . n B 2 13 TYR 13 197 -99999 TYR TYR B . n B 2 14 SER 14 198 -99999 SER SER B . n B 2 15 THR 15 199 -99999 THR THR B . n B 2 16 ALA 16 200 -99999 ALA ALA B . n B 2 17 PRO 17 201 -99999 PRO PRO B . n B 2 18 GLY 18 202 -99999 GLY GLY B . n B 2 19 TYR 19 203 -99999 TYR TYR B . n B 2 20 TYR 20 204 -99999 TYR TYR B . n B 2 21 SER 21 205 -99999 SER SER B . n B 2 22 TRP 22 206 -99999 TRP TRP B . n B 2 23 ARG 23 207 -99999 ARG ARG B . n B 2 24 ASN 24 208 -99999 ASN ASN B . n B 2 25 SER 25 209 -99999 SER SER B . n B 2 26 LYS 26 210 -99999 LYS LYS B . n B 2 27 ASP 27 211 -99999 ASP ASP B . n B 2 28 GLY 28 212 -99999 GLY GLY B . n B 2 29 SER 29 213 -99999 SER SER B . n B 2 30 TRP 30 214 -99999 TRP TRP B . n B 2 31 PHE 31 215 -99999 PHE PHE B . n B 2 32 ILE 32 216 -99999 ILE ILE B . n B 2 33 GLN 33 217 -99999 GLN GLN B . n B 2 34 SER 34 218 -99999 SER SER B . n B 2 35 LEU 35 219 -99999 LEU LEU B . n B 2 36 CYS 36 220 -99999 CYS CYS B . n B 2 37 ALA 37 221 -99999 ALA ALA B . n B 2 38 MET 38 222 -99999 MET MET B . n B 2 39 LEU 39 223 -99999 LEU LEU B . n B 2 40 LYS 40 224 -99999 LYS LYS B . n B 2 41 GLN 41 225 -99999 GLN GLN B . n B 2 42 TYR 42 226 -99999 TYR TYR B . n B 2 43 ALA 43 227 -99999 ALA ALA B . n B 2 44 ASP 44 228 -99999 ASP ASP B . n B 2 45 LYS 45 229 -99999 LYS LYS B . n B 2 46 LEU 46 230 -99999 LEU LEU B . n B 2 47 GLU 47 231 -99999 GLU GLU B . n B 2 48 PHE 48 232 -99999 PHE PHE B . n B 2 49 MET 49 233 -99999 MET MET B . n B 2 50 HIS 50 234 -99999 HIS HIS B . n B 2 51 ILE 51 235 -99999 ILE ILE B . n B 2 52 LEU 52 236 -99999 LEU LEU B . n B 2 53 THR 53 237 -99999 THR THR B . n B 2 54 ARG 54 238 -99999 ARG ARG B . n B 2 55 VAL 55 239 -99999 VAL VAL B . n B 2 56 ASN 56 240 -99999 ASN ASN B . n B 2 57 ARG 57 241 -99999 ARG ARG B . n B 2 58 LYS 58 242 -99999 LYS LYS B . n B 2 59 VAL 59 243 -99999 VAL VAL B . n B 2 60 ALA 60 244 -99999 ALA ALA B . n B 2 61 THR 61 245 -99999 THR THR B . n B 2 62 GLU 62 246 -99999 GLU GLU B . n B 2 63 PHE 63 247 -99999 PHE PHE B . n B 2 64 GLU 64 248 -99999 GLU GLU B . n B 2 65 SER 65 249 -99999 SER SER B . n B 2 66 PHE 66 250 -99999 PHE PHE B . n B 2 67 SER 67 251 -99999 SER SER B . n B 2 68 PHE 68 252 -99999 PHE PHE B . n B 2 69 ASP 69 253 -99999 ASP ASP B . n B 2 70 ALA 70 254 -99999 ALA ALA B . n B 2 71 THR 71 255 -99999 THR THR B . n B 2 72 PHE 72 256 -99999 PHE PHE B . n B 2 73 HIS 73 257 -99999 HIS HIS B . n B 2 74 ALA 74 258 -99999 ALA ALA B . n B 2 75 LYS 75 259 -99999 LYS LYS B . n B 2 76 LYS 76 260 -99999 LYS LYS B . n B 2 77 GLN 77 261 -99999 GLN GLN B . n B 2 78 ILE 78 262 -99999 ILE ILE B . n B 2 79 PRO 79 263 -99999 PRO PRO B . n B 2 80 CYS 80 264 -99999 CYS CYS B . n B 2 81 ILE 81 265 -99999 ILE ILE B . n B 2 82 VAL 82 266 -99999 VAL VAL B . n B 2 83 SER 83 267 -99999 SER SER B . n B 2 84 MET 84 268 -99999 MET MET B . n B 2 85 LEU 85 269 -99999 LEU LEU B . n B 2 86 THR 86 270 -99999 THR THR B . n B 2 87 LYS 87 271 -99999 LYS LYS B . n B 2 88 GLU 88 272 -99999 GLU GLU B . n B 2 89 LEU 89 273 -99999 LEU LEU B . n B 2 90 TYR 90 274 -99999 TYR TYR B . n B 2 91 PHE 91 275 -99999 PHE PHE B . n B 2 92 TYR 92 276 -99999 TYR TYR B . n B 2 93 HIS 93 277 -99999 HIS HIS B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MSI 1 301 -99999 MSI MSI ? . D 4 HOH 1 1 -99999 HOH HOH ? . D 4 HOH 2 2 -99999 HOH HOH ? . D 4 HOH 3 3 -99999 HOH HOH ? . D 4 HOH 4 4 -99999 HOH HOH ? . D 4 HOH 5 5 -99999 HOH HOH ? . D 4 HOH 6 6 -99999 HOH HOH ? . D 4 HOH 7 7 -99999 HOH HOH ? . D 4 HOH 8 8 -99999 HOH HOH ? . D 4 HOH 9 9 -99999 HOH HOH ? . D 4 HOH 10 10 -99999 HOH HOH ? . D 4 HOH 11 11 -99999 HOH HOH ? . D 4 HOH 12 12 -99999 HOH HOH ? . D 4 HOH 13 13 -99999 HOH HOH ? . D 4 HOH 14 14 -99999 HOH HOH ? . D 4 HOH 15 15 -99999 HOH HOH ? . D 4 HOH 16 16 -99999 HOH HOH ? . D 4 HOH 17 17 -99999 HOH HOH ? . D 4 HOH 18 18 -99999 HOH HOH ? . D 4 HOH 19 19 -99999 HOH HOH ? . D 4 HOH 20 20 -99999 HOH HOH ? . D 4 HOH 21 21 -99999 HOH HOH ? . D 4 HOH 22 22 -99999 HOH HOH ? . D 4 HOH 23 23 -99999 HOH HOH ? . D 4 HOH 24 24 -99999 HOH HOH ? . D 4 HOH 25 25 -99999 HOH HOH ? . D 4 HOH 26 26 -99999 HOH HOH ? . D 4 HOH 27 27 -99999 HOH HOH ? . D 4 HOH 28 28 -99999 HOH HOH ? . D 4 HOH 29 29 -99999 HOH HOH ? . D 4 HOH 30 30 -99999 HOH HOH ? . D 4 HOH 31 31 -99999 HOH HOH ? . D 4 HOH 32 32 -99999 HOH HOH ? . D 4 HOH 33 33 -99999 HOH HOH ? . D 4 HOH 34 34 -99999 HOH HOH ? . D 4 HOH 35 35 -99999 HOH HOH ? . D 4 HOH 36 36 -99999 HOH HOH ? . D 4 HOH 37 37 -99999 HOH HOH ? . D 4 HOH 38 38 -99999 HOH HOH ? . D 4 HOH 39 39 -99999 HOH HOH ? . D 4 HOH 40 40 -99999 HOH HOH ? . D 4 HOH 41 41 -99999 HOH HOH ? . D 4 HOH 42 42 -99999 HOH HOH ? . D 4 HOH 43 43 -99999 HOH HOH ? . D 4 HOH 44 44 -99999 HOH HOH ? . D 4 HOH 45 46 -99999 HOH HOH ? . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-04-17 2 'Structure model' 1 1 2000-06-23 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR 'data collection' . ? 1 DENZO/SCALEPACK 'data reduction' . ? 2 AMoRE 'model building' . ? 3 X-PLOR refinement '3.851 & CNS' ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B ARG 241 ? ? OG1 B THR 245 ? ? 2.08 2 1 ND2 A ASN 51 ? ? OG1 A THR 67 ? ? 2.11 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 N _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 GLY _pdbx_validate_rmsd_angle.auth_seq_id_1 129 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CA _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 GLY _pdbx_validate_rmsd_angle.auth_seq_id_2 129 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 C _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 GLY _pdbx_validate_rmsd_angle.auth_seq_id_3 129 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 97.24 _pdbx_validate_rmsd_angle.angle_target_value 113.10 _pdbx_validate_rmsd_angle.angle_deviation -15.86 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 34 ? ? -165.63 63.63 2 1 ASN A 51 ? ? -102.84 74.84 3 1 LYS A 57 ? ? -35.29 -38.66 4 1 ASP A 90 ? ? 33.23 65.86 5 1 PHE A 114 ? ? -161.80 119.40 6 1 SER A 120 ? ? -173.59 -166.73 7 1 LYS B 210 ? ? -94.23 -64.13 8 1 TYR B 226 ? ? -144.65 -5.31 9 1 LYS B 229 ? ? -137.03 -57.92 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A LYS 53 ? CE ? A LYS 25 CE 2 1 Y 0 A LYS 53 ? NZ ? A LYS 25 NZ 3 1 Y 0 A LYS 57 ? CB ? A LYS 29 CB 4 1 Y 0 A LYS 57 ? CG ? A LYS 29 CG 5 1 Y 0 A LYS 57 ? CD ? A LYS 29 CD 6 1 Y 0 A LYS 57 ? CE ? A LYS 29 CE 7 1 Y 0 A LYS 57 ? NZ ? A LYS 29 NZ 8 1 Y 0 A LYS 88 ? CG ? A LYS 60 CG 9 1 Y 0 A LYS 88 ? CD ? A LYS 60 CD 10 1 Y 0 A LYS 88 ? CE ? A LYS 60 CE 11 1 Y 0 A LYS 88 ? NZ ? A LYS 60 NZ 12 1 Y 0 A ARG 101 ? CZ ? A ARG 73 CZ 13 1 Y 0 A ARG 101 ? NH1 ? A ARG 73 NH1 14 1 Y 0 A ARG 101 ? NH2 ? A ARG 73 NH2 15 1 Y 0 A ARG 149 ? CG ? A ARG 121 CG 16 1 Y 0 A ARG 149 ? CD ? A ARG 121 CD 17 1 Y 0 A ARG 149 ? NE ? A ARG 121 NE 18 1 Y 0 A ARG 149 ? CZ ? A ARG 121 CZ 19 1 Y 0 A ARG 149 ? NH1 ? A ARG 121 NH1 20 1 Y 0 A ARG 149 ? NH2 ? A ARG 121 NH2 21 1 Y 0 A GLU 173 ? CB ? A GLU 145 CB 22 1 Y 0 A GLU 173 ? CG ? A GLU 145 CG 23 1 Y 0 A GLU 173 ? CD ? A GLU 145 CD 24 1 Y 0 A GLU 173 ? OE1 ? A GLU 145 OE1 25 1 Y 0 A GLU 173 ? OE2 ? A GLU 145 OE2 26 1 Y 0 B LYS 210 ? CB ? B LYS 26 CB 27 1 Y 0 B LYS 210 ? CG ? B LYS 26 CG 28 1 Y 0 B LYS 210 ? CD ? B LYS 26 CD 29 1 Y 0 B LYS 210 ? CE ? B LYS 26 CE 30 1 Y 0 B LYS 210 ? NZ ? B LYS 26 NZ 31 1 Y 0 B LYS 224 ? CD ? B LYS 40 CD 32 1 Y 0 B LYS 224 ? CE ? B LYS 40 CE 33 1 Y 0 B LYS 224 ? NZ ? B LYS 40 NZ # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 '1-METHYL-5-(2-PHENOXYMETHYL-PYRROLIDINE-1-SULFONYL)-1H-INDOLE-2,3-DIONE' MSI 4 water HOH #