HEADER ALPHA-BETA STRUCTURE 12-MAR-99 1QAH TITLE CRYSTAL STRUCTURE OF PERCHLORIC ACID SOLUBLE PROTEIN-A TRANSLATIONAL TITLE 2 INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: PERCHLORIC ACID SOLUBLE PROTEIN; COMPND 3 CHAIN: A, B SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: NORWAY RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 ORGAN: LIVER, KIDNEY KEYWDS ALPHA-BETA STRUCTURE EXPDTA X-RAY DIFFRACTION AUTHOR K.DJINOVIC CARUGO,T.OKA REVDAT 5 14-FEB-24 1QAH 1 REMARK REVDAT 4 28-JUL-21 1QAH 1 REMARK REVDAT 3 13-JUL-11 1QAH 1 VERSN REVDAT 2 24-FEB-09 1QAH 1 VERSN REVDAT 1 09-MAR-04 1QAH 0 JRNL AUTH K.DJINOVIC CARUGO,T.OKA JRNL TITL CRYSTAL STRUCTURE OF PERCHLORIC ACID SOLUBLE PROTEIN-A JRNL TITL 2 TRANSLATIONAL INHIBITOR JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 22116 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1134 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1946 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 379 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.015 ; NULL REMARK 3 ANGLE DISTANCE (A) : 0.037 ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1QAH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-MAR-99. REMARK 100 THE DEPOSITION ID IS D_1000009305. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-OCT-98 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9183 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22619 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 63.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 3.340 REMARK 200 R MERGE (I) : 0.03100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 34.1400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.6 REMARK 200 DATA REDUNDANCY IN SHELL : 2.93 REMARK 200 R MERGE FOR SHELL (I) : 0.27700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: VAPOR DIFFUSION, HANGING DROP, PH 4.5, REMARK 280 293K, PEG 8000, SODIUM ACETATE, AMMONIUM SULPHATE REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 44.87150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.87150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.87150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 44.87150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 44.87150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.87150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 44.87150 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 44.87150 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 44.87150 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 44.87150 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 44.87150 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 44.87150 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 44.87150 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 44.87150 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 44.87150 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 44.87150 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 44.87150 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 44.87150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 6680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14680 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 -44.87150 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 44.87150 REMARK 350 BIOMT3 2 0.000000 -1.000000 0.000000 89.74300 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 44.87150 REMARK 350 BIOMT2 3 0.000000 0.000000 -1.000000 89.74300 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 44.87150 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 6600 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 -1.000000 44.87150 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 44.87150 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 -44.87150 REMARK 350 BIOMT3 3 -1.000000 0.000000 0.000000 44.87150 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 322 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 323 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 324 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 325 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 327 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 311 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 312 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 313 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 133 REMARK 465 ALA A 134 REMARK 465 GLY A 135 REMARK 465 LEU A 136 REMARK 465 THR B 133 REMARK 465 ALA B 134 REMARK 465 GLY B 135 REMARK 465 LEU B 136 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLY A 129 CA GLY A 129 C -0.114 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 SER A 1 CA - C - O ANGL. DEV. = -13.3 DEGREES REMARK 500 SER A 1 CA - C - N ANGL. DEV. = 14.2 DEGREES REMARK 500 ARG A 5 N - CA - CB ANGL. DEV. = 11.4 DEGREES REMARK 500 ARG A 5 CA - CB - CG ANGL. DEV. = 23.9 DEGREES REMARK 500 ASP A 27 CB - CG - OD1 ANGL. DEV. = 5.4 DEGREES REMARK 500 ARG A 28 NE - CZ - NH1 ANGL. DEV. = -4.2 DEGREES REMARK 500 TYR A 31 CB - CG - CD2 ANGL. DEV. = -4.2 DEGREES REMARK 500 GLU A 52 OE1 - CD - OE2 ANGL. DEV. = -7.9 DEGREES REMARK 500 PHE A 72 CB - CG - CD2 ANGL. DEV. = 4.7 DEGREES REMARK 500 PHE A 72 CB - CG - CD1 ANGL. DEV. = -4.4 DEGREES REMARK 500 TYR A 109 CB - CG - CD1 ANGL. DEV. = -4.1 DEGREES REMARK 500 TYR A 109 CG - CD1 - CE1 ANGL. DEV. = -14.8 DEGREES REMARK 500 TYR A 109 CD1 - CE1 - CZ ANGL. DEV. = 22.9 DEGREES REMARK 500 TYR A 109 CE1 - CZ - CE2 ANGL. DEV. = -12.3 DEGREES REMARK 500 ARG A 119 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 GLU A 121 OE1 - CD - OE2 ANGL. DEV. = -7.8 DEGREES REMARK 500 GLY A 129 N - CA - C ANGL. DEV. = 46.3 DEGREES REMARK 500 PRO A 130 N - CA - C ANGL. DEV. = -18.9 DEGREES REMARK 500 ARG B 5 NE - CZ - NH1 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG B 28 CD - NE - CZ ANGL. DEV. = 9.7 DEGREES REMARK 500 ARG B 28 NE - CZ - NH1 ANGL. DEV. = 5.2 DEGREES REMARK 500 ARG B 28 NE - CZ - NH2 ANGL. DEV. = -9.0 DEGREES REMARK 500 TYR B 95 CB - CG - CD2 ANGL. DEV. = -3.6 DEGREES REMARK 500 TYR B 109 CB - CG - CD2 ANGL. DEV. = -5.6 DEGREES REMARK 500 TYR B 109 CB - CG - CD1 ANGL. DEV. = 5.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 27 -103.29 60.80 REMARK 500 ASN A 102 99.25 -62.88 REMARK 500 ILE B 17 106.72 -48.33 REMARK 500 ALA B 19 -175.26 -65.09 REMARK 500 TYR B 20 149.48 58.28 REMARK 500 ASP B 27 -108.76 65.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ALA A 108 12.03 REMARK 500 LEU B 58 -10.36 REMARK 500 GLN B 128 -13.65 REMARK 500 REMARK 500 REMARK: NULL DBREF 1QAH A 1 136 UNP P52759 UK14_RAT 1 136 DBREF 1QAH B 1 136 UNP P52759 UK14_RAT 1 136 SEQRES 1 A 136 SER SER ILE ILE ARG LYS VAL ILE SER THR SER LYS ALA SEQRES 2 A 136 PRO ALA ALA ILE GLY ALA TYR SER GLN ALA VAL LEU VAL SEQRES 3 A 136 ASP ARG THR ILE TYR VAL SER GLY GLN ILE GLY MET ASP SEQRES 4 A 136 PRO SER SER GLY GLN LEU VAL PRO GLY GLY VAL ALA GLU SEQRES 5 A 136 GLU ALA LYS GLN ALA LEU LYS ASN LEU GLY GLU ILE LEU SEQRES 6 A 136 LYS ALA ALA GLY CYS ASP PHE THR ASN VAL VAL LYS THR SEQRES 7 A 136 THR VAL LEU LEU ALA ASP ILE ASN ASP PHE GLY THR VAL SEQRES 8 A 136 ASN GLU ILE TYR LYS THR TYR PHE GLN GLY ASN LEU PRO SEQRES 9 A 136 ALA ARG ALA ALA TYR GLN VAL ALA ALA LEU PRO LYS GLY SEQRES 10 A 136 SER ARG ILE GLU ILE GLU ALA ILE ALA VAL GLN GLY PRO SEQRES 11 A 136 PHE THR THR ALA GLY LEU SEQRES 1 B 136 SER SER ILE ILE ARG LYS VAL ILE SER THR SER LYS ALA SEQRES 2 B 136 PRO ALA ALA ILE GLY ALA TYR SER GLN ALA VAL LEU VAL SEQRES 3 B 136 ASP ARG THR ILE TYR VAL SER GLY GLN ILE GLY MET ASP SEQRES 4 B 136 PRO SER SER GLY GLN LEU VAL PRO GLY GLY VAL ALA GLU SEQRES 5 B 136 GLU ALA LYS GLN ALA LEU LYS ASN LEU GLY GLU ILE LEU SEQRES 6 B 136 LYS ALA ALA GLY CYS ASP PHE THR ASN VAL VAL LYS THR SEQRES 7 B 136 THR VAL LEU LEU ALA ASP ILE ASN ASP PHE GLY THR VAL SEQRES 8 B 136 ASN GLU ILE TYR LYS THR TYR PHE GLN GLY ASN LEU PRO SEQRES 9 B 136 ALA ARG ALA ALA TYR GLN VAL ALA ALA LEU PRO LYS GLY SEQRES 10 B 136 SER ARG ILE GLU ILE GLU ALA ILE ALA VAL GLN GLY PRO SEQRES 11 B 136 PHE THR THR ALA GLY LEU FORMUL 3 HOH *379(H2 O) HELIX 1 1 VAL A 50 ALA A 67 1 18 HELIX 2 2 PHE A 72 ASN A 74 5 3 HELIX 3 3 ILE A 85 ASP A 87 5 3 HELIX 4 4 PHE A 88 LYS A 96 1 9 HELIX 5 5 PRO A 115 GLY A 117 5 3 HELIX 6 6 VAL B 50 ALA B 67 1 18 HELIX 7 7 PHE B 72 ASN B 74 5 3 HELIX 8 8 ILE B 85 ASP B 87 5 3 HELIX 9 9 PHE B 88 LYS B 96 1 9 HELIX 10 10 PRO B 115 GLY B 117 5 3 SHEET 1 A 6 ARG A 5 ILE A 8 0 SHEET 2 A 6 ALA A 23 VAL A 26 -1 O LEU A 25 N LYS A 6 SHEET 3 A 6 THR A 29 GLN A 35 -1 O THR A 29 N VAL A 26 SHEET 4 A 6 ILE A 120 VAL A 127 -1 O ALA A 126 N ILE A 30 SHEET 5 A 6 VAL A 75 LEU A 82 -1 N LEU A 81 O GLU A 121 SHEET 6 A 6 ALA A 105 GLN A 110 1 O ALA A 107 N VAL A 80 SHEET 1 B 6 ARG B 5 ILE B 8 0 SHEET 2 B 6 ALA B 23 VAL B 26 -1 O LEU B 25 N LYS B 6 SHEET 3 B 6 THR B 29 ILE B 36 -1 O THR B 29 N VAL B 26 SHEET 4 B 6 ILE B 120 VAL B 127 -1 O ALA B 126 N ILE B 30 SHEET 5 B 6 VAL B 75 LEU B 82 -1 N LEU B 81 O GLU B 121 SHEET 6 B 6 ALA B 105 GLN B 110 1 O ALA B 107 N VAL B 80 CRYST1 89.743 89.743 89.743 90.00 90.00 90.00 P 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011140 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011140 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011140 0.00000