data_1QCY # _entry.id 1QCY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1QCY pdb_00001qcy 10.2210/pdb1qcy/pdb RCSB RCSB009087 ? ? WWPDB D_1000009087 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-09-02 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2014-11-12 5 'Structure model' 1 4 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Structure summary' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' pdbx_struct_conn_angle 5 5 'Structure model' struct_conn 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.value' 16 5 'Structure model' '_struct_conn.pdbx_dist_value' 17 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 18 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 19 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 20 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 21 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 22 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 23 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 24 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 25 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 26 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 27 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 28 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 29 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 30 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1QCY _pdbx_database_status.recvd_initial_deposition_date 1999-05-12 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kankare, J.A.' 1 'Salminen, T.A.' 2 'Nymalm, Y.' 3 'Kaepylae, J.' 4 'Heino, J.' 5 'Johnson, M.S.' 6 # _citation.id primary _citation.title 'Jararhagin-derived RKKH Peptides Induce Structural Changes in a1I Domain of Human Integrin a1b1' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 279 _citation.page_first 7962 _citation.page_last 7970 _citation.year 2004 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 14660600 _citation.pdbx_database_id_DOI 10.1074/jbc.M312912200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nymalm, Y.' 1 ? primary 'Puranen, J.S.' 2 ? primary 'Nyholm, T.K.M.' 3 ? primary 'Kaepylae, J.' 4 ? primary 'Kidron, H.' 5 ? primary 'Pentikaeinen, O.T.' 6 ? primary 'Airenne, T.T.' 7 ? primary 'Heino, J.' 8 ? primary 'Slotte, J.P.' 9 ? primary 'Johnson, M.S.' 10 ? primary 'Salminen, T.A.' 11 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'I-DOMAIN OF INTEGRIN ALPHA1BETA1' 21546.402 1 ? K170E 'FRAGMENT, I-DOMAIN OF HUMAN INTEGRIN A1B1' ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 water nat water 18.015 94 ? ? ? ? # _entity_keywords.entity_id 1 _entity_keywords.text ;THE SEQUENCE IS DIFFERENT IN SWISS-PROT, NO ELECTRON SIDE-CHAIN DENSITY WAS EVER SEEN FOR RESIDUE R218, LEFT AS AN ALANINE IN THE STRUCTURE ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;TQLDIVIVLDGSNSIYPWDSVTAFLNDLLKRMDIGPKQTQVGIVQYGENVTHEFNLNKYSSTEEVLVAAKKIVQRGGAQT MTALGTDTARKEAFTEARGARRGVKKVMVIVTDGESHDNHRLKKVIQDCEDENIQRFSIAILGSYNRGNLSTEKFVEEIK SIASEPTEKHFFNVSDELALVTIVKTLGERIFA ; _entity_poly.pdbx_seq_one_letter_code_can ;TQLDIVIVLDGSNSIYPWDSVTAFLNDLLKRMDIGPKQTQVGIVQYGENVTHEFNLNKYSSTEEVLVAAKKIVQRGGAQT MTALGTDTARKEAFTEARGARRGVKKVMVIVTDGESHDNHRLKKVIQDCEDENIQRFSIAILGSYNRGNLSTEKFVEEIK SIASEPTEKHFFNVSDELALVTIVKTLGERIFA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 GLN n 1 3 LEU n 1 4 ASP n 1 5 ILE n 1 6 VAL n 1 7 ILE n 1 8 VAL n 1 9 LEU n 1 10 ASP n 1 11 GLY n 1 12 SER n 1 13 ASN n 1 14 SER n 1 15 ILE n 1 16 TYR n 1 17 PRO n 1 18 TRP n 1 19 ASP n 1 20 SER n 1 21 VAL n 1 22 THR n 1 23 ALA n 1 24 PHE n 1 25 LEU n 1 26 ASN n 1 27 ASP n 1 28 LEU n 1 29 LEU n 1 30 LYS n 1 31 ARG n 1 32 MET n 1 33 ASP n 1 34 ILE n 1 35 GLY n 1 36 PRO n 1 37 LYS n 1 38 GLN n 1 39 THR n 1 40 GLN n 1 41 VAL n 1 42 GLY n 1 43 ILE n 1 44 VAL n 1 45 GLN n 1 46 TYR n 1 47 GLY n 1 48 GLU n 1 49 ASN n 1 50 VAL n 1 51 THR n 1 52 HIS n 1 53 GLU n 1 54 PHE n 1 55 ASN n 1 56 LEU n 1 57 ASN n 1 58 LYS n 1 59 TYR n 1 60 SER n 1 61 SER n 1 62 THR n 1 63 GLU n 1 64 GLU n 1 65 VAL n 1 66 LEU n 1 67 VAL n 1 68 ALA n 1 69 ALA n 1 70 LYS n 1 71 LYS n 1 72 ILE n 1 73 VAL n 1 74 GLN n 1 75 ARG n 1 76 GLY n 1 77 GLY n 1 78 ALA n 1 79 GLN n 1 80 THR n 1 81 MET n 1 82 THR n 1 83 ALA n 1 84 LEU n 1 85 GLY n 1 86 THR n 1 87 ASP n 1 88 THR n 1 89 ALA n 1 90 ARG n 1 91 LYS n 1 92 GLU n 1 93 ALA n 1 94 PHE n 1 95 THR n 1 96 GLU n 1 97 ALA n 1 98 ARG n 1 99 GLY n 1 100 ALA n 1 101 ARG n 1 102 ARG n 1 103 GLY n 1 104 VAL n 1 105 LYS n 1 106 LYS n 1 107 VAL n 1 108 MET n 1 109 VAL n 1 110 ILE n 1 111 VAL n 1 112 THR n 1 113 ASP n 1 114 GLY n 1 115 GLU n 1 116 SER n 1 117 HIS n 1 118 ASP n 1 119 ASN n 1 120 HIS n 1 121 ARG n 1 122 LEU n 1 123 LYS n 1 124 LYS n 1 125 VAL n 1 126 ILE n 1 127 GLN n 1 128 ASP n 1 129 CYS n 1 130 GLU n 1 131 ASP n 1 132 GLU n 1 133 ASN n 1 134 ILE n 1 135 GLN n 1 136 ARG n 1 137 PHE n 1 138 SER n 1 139 ILE n 1 140 ALA n 1 141 ILE n 1 142 LEU n 1 143 GLY n 1 144 SER n 1 145 TYR n 1 146 ASN n 1 147 ARG n 1 148 GLY n 1 149 ASN n 1 150 LEU n 1 151 SER n 1 152 THR n 1 153 GLU n 1 154 LYS n 1 155 PHE n 1 156 VAL n 1 157 GLU n 1 158 GLU n 1 159 ILE n 1 160 LYS n 1 161 SER n 1 162 ILE n 1 163 ALA n 1 164 SER n 1 165 GLU n 1 166 PRO n 1 167 THR n 1 168 GLU n 1 169 LYS n 1 170 HIS n 1 171 PHE n 1 172 PHE n 1 173 ASN n 1 174 VAL n 1 175 SER n 1 176 ASP n 1 177 GLU n 1 178 LEU n 1 179 ALA n 1 180 LEU n 1 181 VAL n 1 182 THR n 1 183 ILE n 1 184 VAL n 1 185 LYS n 1 186 THR n 1 187 LEU n 1 188 GLY n 1 189 GLU n 1 190 ARG n 1 191 ILE n 1 192 PHE n 1 193 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 141 141 THR THR A . n A 1 2 GLN 2 142 142 GLN GLN A . n A 1 3 LEU 3 143 143 LEU LEU A . n A 1 4 ASP 4 144 144 ASP ASP A . n A 1 5 ILE 5 145 145 ILE ILE A . n A 1 6 VAL 6 146 146 VAL VAL A . n A 1 7 ILE 7 147 147 ILE ILE A . n A 1 8 VAL 8 148 148 VAL VAL A . n A 1 9 LEU 9 149 149 LEU LEU A . n A 1 10 ASP 10 150 150 ASP ASP A . n A 1 11 GLY 11 151 151 GLY GLY A . n A 1 12 SER 12 152 152 SER SER A . n A 1 13 ASN 13 153 153 ASN ASN A . n A 1 14 SER 14 154 154 SER SER A . n A 1 15 ILE 15 155 155 ILE ILE A . n A 1 16 TYR 16 156 156 TYR TYR A . n A 1 17 PRO 17 157 157 PRO PRO A . n A 1 18 TRP 18 158 158 TRP TRP A . n A 1 19 ASP 19 159 159 ASP ASP A . n A 1 20 SER 20 160 160 SER SER A . n A 1 21 VAL 21 161 161 VAL VAL A . n A 1 22 THR 22 162 162 THR THR A . n A 1 23 ALA 23 163 163 ALA ALA A . n A 1 24 PHE 24 164 164 PHE PHE A . n A 1 25 LEU 25 165 165 LEU LEU A . n A 1 26 ASN 26 166 166 ASN ASN A . n A 1 27 ASP 27 167 167 ASP ASP A . n A 1 28 LEU 28 168 168 LEU LEU A . n A 1 29 LEU 29 169 169 LEU LEU A . n A 1 30 LYS 30 170 170 LYS LYS A . n A 1 31 ARG 31 171 171 ARG ARG A . n A 1 32 MET 32 172 172 MET MET A . n A 1 33 ASP 33 173 173 ASP ASP A . n A 1 34 ILE 34 174 174 ILE ILE A . n A 1 35 GLY 35 175 175 GLY GLY A . n A 1 36 PRO 36 176 176 PRO PRO A . n A 1 37 LYS 37 177 177 LYS LYS A . n A 1 38 GLN 38 178 178 GLN GLN A . n A 1 39 THR 39 179 179 THR THR A . n A 1 40 GLN 40 180 180 GLN GLN A . n A 1 41 VAL 41 181 181 VAL VAL A . n A 1 42 GLY 42 182 182 GLY GLY A . n A 1 43 ILE 43 183 183 ILE ILE A . n A 1 44 VAL 44 184 184 VAL VAL A . n A 1 45 GLN 45 185 185 GLN GLN A . n A 1 46 TYR 46 186 186 TYR TYR A . n A 1 47 GLY 47 187 187 GLY GLY A . n A 1 48 GLU 48 188 188 GLU GLU A . n A 1 49 ASN 49 189 189 ASN ASN A . n A 1 50 VAL 50 190 190 VAL VAL A . n A 1 51 THR 51 191 191 THR THR A . n A 1 52 HIS 52 192 192 HIS HIS A . n A 1 53 GLU 53 193 193 GLU GLU A . n A 1 54 PHE 54 194 194 PHE PHE A . n A 1 55 ASN 55 195 195 ASN ASN A . n A 1 56 LEU 56 196 196 LEU LEU A . n A 1 57 ASN 57 197 197 ASN ASN A . n A 1 58 LYS 58 198 198 LYS LYS A . n A 1 59 TYR 59 199 199 TYR TYR A . n A 1 60 SER 60 200 200 SER SER A . n A 1 61 SER 61 201 201 SER SER A . n A 1 62 THR 62 202 202 THR THR A . n A 1 63 GLU 63 203 203 GLU GLU A . n A 1 64 GLU 64 204 204 GLU GLU A . n A 1 65 VAL 65 205 205 VAL VAL A . n A 1 66 LEU 66 206 206 LEU LEU A . n A 1 67 VAL 67 207 207 VAL VAL A . n A 1 68 ALA 68 208 208 ALA ALA A . n A 1 69 ALA 69 209 209 ALA ALA A . n A 1 70 LYS 70 210 210 LYS LYS A . n A 1 71 LYS 71 211 211 LYS LYS A . n A 1 72 ILE 72 212 212 ILE ILE A . n A 1 73 VAL 73 213 213 VAL VAL A . n A 1 74 GLN 74 214 214 GLN GLN A . n A 1 75 ARG 75 215 215 ARG ARG A . n A 1 76 GLY 76 216 216 GLY GLY A . n A 1 77 GLY 77 217 217 GLY GLY A . n A 1 78 ALA 78 218 218 ALA ALA A . n A 1 79 GLN 79 219 219 GLN GLN A . n A 1 80 THR 80 220 220 THR THR A . n A 1 81 MET 81 221 221 MET MET A . n A 1 82 THR 82 222 222 THR THR A . n A 1 83 ALA 83 223 223 ALA ALA A . n A 1 84 LEU 84 224 224 LEU LEU A . n A 1 85 GLY 85 225 225 GLY GLY A . n A 1 86 THR 86 226 226 THR THR A . n A 1 87 ASP 87 227 227 ASP ASP A . n A 1 88 THR 88 228 228 THR THR A . n A 1 89 ALA 89 229 229 ALA ALA A . n A 1 90 ARG 90 230 230 ARG ARG A . n A 1 91 LYS 91 231 231 LYS LYS A . n A 1 92 GLU 92 232 232 GLU GLU A . n A 1 93 ALA 93 233 233 ALA ALA A . n A 1 94 PHE 94 234 234 PHE PHE A . n A 1 95 THR 95 235 235 THR THR A . n A 1 96 GLU 96 236 236 GLU GLU A . n A 1 97 ALA 97 237 237 ALA ALA A . n A 1 98 ARG 98 238 238 ARG ARG A . n A 1 99 GLY 99 239 239 GLY GLY A . n A 1 100 ALA 100 240 240 ALA ALA A . n A 1 101 ARG 101 241 241 ARG ARG A . n A 1 102 ARG 102 242 242 ARG ARG A . n A 1 103 GLY 103 243 243 GLY GLY A . n A 1 104 VAL 104 244 244 VAL VAL A . n A 1 105 LYS 105 245 245 LYS LYS A . n A 1 106 LYS 106 246 246 LYS LYS A . n A 1 107 VAL 107 247 247 VAL VAL A . n A 1 108 MET 108 248 248 MET MET A . n A 1 109 VAL 109 249 249 VAL VAL A . n A 1 110 ILE 110 250 250 ILE ILE A . n A 1 111 VAL 111 251 251 VAL VAL A . n A 1 112 THR 112 252 252 THR THR A . n A 1 113 ASP 113 253 253 ASP ASP A . n A 1 114 GLY 114 254 254 GLY GLY A . n A 1 115 GLU 115 255 255 GLU GLU A . n A 1 116 SER 116 256 256 SER SER A . n A 1 117 HIS 117 257 257 HIS HIS A . n A 1 118 ASP 118 258 258 ASP ASP A . n A 1 119 ASN 119 259 259 ASN ASN A . n A 1 120 HIS 120 260 260 HIS HIS A . n A 1 121 ARG 121 261 261 ARG ARG A . n A 1 122 LEU 122 262 262 LEU LEU A . n A 1 123 LYS 123 263 263 LYS LYS A . n A 1 124 LYS 124 264 264 LYS LYS A . n A 1 125 VAL 125 265 265 VAL VAL A . n A 1 126 ILE 126 266 266 ILE ILE A . n A 1 127 GLN 127 267 267 GLN GLN A . n A 1 128 ASP 128 268 268 ASP ASP A . n A 1 129 CYS 129 269 269 CYS CYS A . n A 1 130 GLU 130 270 270 GLU GLU A . n A 1 131 ASP 131 271 271 ASP ASP A . n A 1 132 GLU 132 272 272 GLU GLU A . n A 1 133 ASN 133 273 273 ASN ASN A . n A 1 134 ILE 134 274 274 ILE ILE A . n A 1 135 GLN 135 275 275 GLN GLN A . n A 1 136 ARG 136 276 276 ARG ARG A . n A 1 137 PHE 137 277 277 PHE PHE A . n A 1 138 SER 138 278 278 SER SER A . n A 1 139 ILE 139 279 279 ILE ILE A . n A 1 140 ALA 140 280 280 ALA ALA A . n A 1 141 ILE 141 281 281 ILE ILE A . n A 1 142 LEU 142 282 282 LEU LEU A . n A 1 143 GLY 143 283 283 GLY GLY A . n A 1 144 SER 144 284 284 SER SER A . n A 1 145 TYR 145 285 285 TYR TYR A . n A 1 146 ASN 146 286 286 ASN ASN A . n A 1 147 ARG 147 287 287 ARG ARG A . n A 1 148 GLY 148 288 288 GLY GLY A . n A 1 149 ASN 149 289 289 ASN ASN A . n A 1 150 LEU 150 290 290 LEU LEU A . n A 1 151 SER 151 291 291 SER SER A . n A 1 152 THR 152 292 292 THR THR A . n A 1 153 GLU 153 293 293 GLU GLU A . n A 1 154 LYS 154 294 294 LYS LYS A . n A 1 155 PHE 155 295 295 PHE PHE A . n A 1 156 VAL 156 296 296 VAL VAL A . n A 1 157 GLU 157 297 297 GLU GLU A . n A 1 158 GLU 158 298 298 GLU GLU A . n A 1 159 ILE 159 299 299 ILE ILE A . n A 1 160 LYS 160 300 300 LYS LYS A . n A 1 161 SER 161 301 301 SER SER A . n A 1 162 ILE 162 302 302 ILE ILE A . n A 1 163 ALA 163 303 303 ALA ALA A . n A 1 164 SER 164 304 304 SER SER A . n A 1 165 GLU 165 305 305 GLU GLU A . n A 1 166 PRO 166 306 306 PRO PRO A . n A 1 167 THR 167 307 307 THR THR A . n A 1 168 GLU 168 308 308 GLU GLU A . n A 1 169 LYS 169 309 309 LYS LYS A . n A 1 170 HIS 170 310 310 HIS HIS A . n A 1 171 PHE 171 311 311 PHE PHE A . n A 1 172 PHE 172 312 312 PHE PHE A . n A 1 173 ASN 173 313 313 ASN ASN A . n A 1 174 VAL 174 314 314 VAL VAL A . n A 1 175 SER 175 315 315 SER SER A . n A 1 176 ASP 176 316 316 ASP ASP A . n A 1 177 GLU 177 317 317 GLU GLU A . n A 1 178 LEU 178 318 318 LEU LEU A . n A 1 179 ALA 179 319 319 ALA ALA A . n A 1 180 LEU 180 320 320 LEU LEU A . n A 1 181 VAL 181 321 321 VAL VAL A . n A 1 182 THR 182 322 322 THR THR A . n A 1 183 ILE 183 323 323 ILE ILE A . n A 1 184 VAL 184 324 324 VAL VAL A . n A 1 185 LYS 185 325 325 LYS LYS A . n A 1 186 THR 186 326 326 THR THR A . n A 1 187 LEU 187 327 327 LEU LEU A . n A 1 188 GLY 188 328 328 GLY GLY A . n A 1 189 GLU 189 329 329 GLU GLU A . n A 1 190 ARG 190 330 330 ARG ARG A . n A 1 191 ILE 191 331 331 ILE ILE A . n A 1 192 PHE 192 332 332 PHE PHE A . n A 1 193 ALA 193 333 333 ALA ALA A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 101 1 MG MG A . C 3 HOH 1 1 1 HOH TIP A . C 3 HOH 2 2 2 HOH TIP A . C 3 HOH 3 3 3 HOH TIP A . C 3 HOH 4 4 4 HOH TIP A . C 3 HOH 5 5 5 HOH TIP A . C 3 HOH 6 6 6 HOH TIP A . C 3 HOH 7 7 7 HOH TIP A . C 3 HOH 8 8 8 HOH TIP A . C 3 HOH 9 9 9 HOH TIP A . C 3 HOH 10 10 10 HOH TIP A . C 3 HOH 11 11 11 HOH TIP A . C 3 HOH 12 12 12 HOH TIP A . C 3 HOH 13 13 13 HOH TIP A . C 3 HOH 14 14 14 HOH TIP A . C 3 HOH 15 15 15 HOH TIP A . C 3 HOH 16 16 16 HOH TIP A . C 3 HOH 17 17 17 HOH TIP A . C 3 HOH 18 18 18 HOH TIP A . C 3 HOH 19 19 19 HOH TIP A . C 3 HOH 20 20 20 HOH TIP A . C 3 HOH 21 21 21 HOH TIP A . C 3 HOH 22 22 22 HOH TIP A . C 3 HOH 23 23 23 HOH TIP A . C 3 HOH 24 24 24 HOH TIP A . C 3 HOH 25 25 25 HOH TIP A . C 3 HOH 26 26 26 HOH TIP A . C 3 HOH 27 27 27 HOH TIP A . C 3 HOH 28 28 28 HOH TIP A . C 3 HOH 29 29 29 HOH TIP A . C 3 HOH 30 30 30 HOH TIP A . C 3 HOH 31 31 31 HOH TIP A . C 3 HOH 32 32 32 HOH TIP A . C 3 HOH 33 33 33 HOH TIP A . C 3 HOH 34 34 34 HOH TIP A . C 3 HOH 35 35 35 HOH TIP A . C 3 HOH 36 36 36 HOH TIP A . C 3 HOH 37 37 37 HOH TIP A . C 3 HOH 38 38 38 HOH TIP A . C 3 HOH 39 39 39 HOH TIP A . C 3 HOH 40 40 40 HOH TIP A . C 3 HOH 41 41 41 HOH TIP A . C 3 HOH 42 42 42 HOH TIP A . C 3 HOH 43 43 43 HOH TIP A . C 3 HOH 44 44 44 HOH TIP A . C 3 HOH 45 45 45 HOH TIP A . C 3 HOH 46 46 46 HOH TIP A . C 3 HOH 47 47 47 HOH TIP A . C 3 HOH 48 48 48 HOH TIP A . C 3 HOH 49 49 49 HOH TIP A . C 3 HOH 50 50 50 HOH TIP A . C 3 HOH 51 51 51 HOH TIP A . C 3 HOH 52 52 52 HOH TIP A . C 3 HOH 53 53 53 HOH TIP A . C 3 HOH 54 54 54 HOH TIP A . C 3 HOH 55 55 55 HOH TIP A . C 3 HOH 56 56 56 HOH TIP A . C 3 HOH 57 57 57 HOH TIP A . C 3 HOH 58 58 58 HOH TIP A . C 3 HOH 59 59 59 HOH TIP A . C 3 HOH 60 60 60 HOH TIP A . C 3 HOH 61 61 61 HOH TIP A . C 3 HOH 62 62 62 HOH TIP A . C 3 HOH 63 63 63 HOH TIP A . C 3 HOH 64 64 64 HOH TIP A . C 3 HOH 65 65 65 HOH TIP A . C 3 HOH 66 66 66 HOH TIP A . C 3 HOH 67 67 67 HOH TIP A . C 3 HOH 68 68 68 HOH TIP A . C 3 HOH 69 69 69 HOH TIP A . C 3 HOH 70 70 70 HOH TIP A . C 3 HOH 71 71 71 HOH TIP A . C 3 HOH 72 72 72 HOH TIP A . C 3 HOH 73 73 73 HOH TIP A . C 3 HOH 74 74 74 HOH TIP A . C 3 HOH 75 75 75 HOH TIP A . C 3 HOH 76 76 76 HOH TIP A . C 3 HOH 77 77 77 HOH TIP A . C 3 HOH 78 78 78 HOH TIP A . C 3 HOH 79 79 79 HOH TIP A . C 3 HOH 80 80 80 HOH TIP A . C 3 HOH 81 81 81 HOH TIP A . C 3 HOH 82 82 82 HOH TIP A . C 3 HOH 83 83 83 HOH TIP A . C 3 HOH 84 84 84 HOH TIP A . C 3 HOH 85 85 85 HOH TIP A . C 3 HOH 86 86 86 HOH TIP A . C 3 HOH 87 87 87 HOH TIP A . C 3 HOH 88 88 88 HOH TIP A . C 3 HOH 89 89 89 HOH TIP A . C 3 HOH 90 90 90 HOH TIP A . C 3 HOH 91 91 91 HOH TIP A . C 3 HOH 92 92 92 HOH TIP A . C 3 HOH 93 93 93 HOH TIP A . C 3 HOH 94 94 94 HOH TIP A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 CNS refinement . ? 3 CNS phasing . ? 4 # _cell.entry_id 1QCY _cell.length_a 74.457 _cell.length_b 81.858 _cell.length_c 37.316 _cell.angle_alpha 90.00 _cell.angle_beta 90.78 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1QCY _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting monoclinic _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1QCY _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.64 _exptl_crystal.density_percent_sol 53.39 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 298.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details 'PEG 4000, Na-acetate, glycerol, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 298.0K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IIC' _diffrn_detector.pdbx_collection_date 1998-09-10 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1QCY _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 500.0 _reflns.d_resolution_high 2.3 _reflns.number_obs 9471 _reflns.number_all ? _reflns.percent_possible_obs 94.8 _reflns.pdbx_Rmerge_I_obs 0.058 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.3 _reflns_shell.d_res_low 2.38 _reflns_shell.percent_possible_all 90.9 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 796 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1QCY _refine.ls_number_reflns_obs 9471 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 374683.35 _refine.pdbx_data_cutoff_low_absF 0.00 _refine.ls_d_res_low 500.0 _refine.ls_d_res_high 2.30 _refine.ls_percent_reflns_obs 94.8 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2 _refine.ls_R_factor_R_free 0.258 _refine.ls_R_factor_R_free_error 0.008 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.5 _refine.ls_number_reflns_R_free 995 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 24.8 _refine.aniso_B[1][1] 2.52 _refine.aniso_B[2][2] -0.49 _refine.aniso_B[3][3] -2.03 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -3.92 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.340 _refine.solvent_model_param_bsol 29.22 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.overall_SU_ML ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_R_Free_selection_details random _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1QCY _refine_analyze.Luzzati_coordinate_error_obs 0.25 _refine_analyze.Luzzati_sigma_a_obs 0.13 _refine_analyze.Luzzati_d_res_low_obs 6.00 _refine_analyze.Luzzati_coordinate_error_free 0.34 _refine_analyze.Luzzati_sigma_a_free 0.22 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1514 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 94 _refine_hist.number_atoms_total 1609 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 500.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d 1.20 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 23.1 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.74 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.38 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.21 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 2.25 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.25 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 2.30 _refine_ls_shell.d_res_low 2.38 _refine_ls_shell.number_reflns_R_work 796 _refine_ls_shell.R_factor_R_work 0.196 _refine_ls_shell.percent_reflns_obs 90.9 _refine_ls_shell.R_factor_R_free 0.287 _refine_ls_shell.R_factor_R_free_error 0.030 _refine_ls_shell.percent_reflns_R_free 10.6 _refine_ls_shell.number_reflns_R_free 94 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM ? 'X-RAY DIFFRACTION' 3 ION.PARAM ? 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1QCY _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1QCY _struct.title 'THE CRYSTAL STRUCTURE OF THE I-DOMAIN OF HUMAN INTEGRIN ALPHA1BETA1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1QCY _struct_keywords.pdbx_keywords 'CELL ADHESION' _struct_keywords.text 'DINUCLEOTIDE BINDING FOLD, ROSSMANN FOLD, CELL ADHESION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ITA1_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P56199 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1QCY _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 193 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P56199 _struct_ref_seq.db_align_beg 141 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 333 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 141 _struct_ref_seq.pdbx_auth_seq_align_end 333 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 1QCY _struct_ref_seq_dif.mon_id ALA _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 78 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P56199 _struct_ref_seq_dif.db_mon_id ARG _struct_ref_seq_dif.pdbx_seq_db_seq_num 218 _struct_ref_seq_dif.details 'SEE REMARK 999' _struct_ref_seq_dif.pdbx_auth_seq_num 218 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details 'I-domain is a fragment of alpha1 subunit of the large integrin heterodimer' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 17 ? ARG A 31 ? PRO A 157 ARG A 171 1 ? 15 HELX_P HELX_P2 2 SER A 61 ? ILE A 72 ? SER A 201 ILE A 212 1 ? 12 HELX_P HELX_P3 3 MET A 81 ? GLU A 92 ? MET A 221 GLU A 232 1 ? 12 HELX_P HELX_P4 4 THR A 95 ? GLY A 99 ? THR A 235 GLY A 239 5 ? 5 HELX_P HELX_P5 5 ARG A 121 ? GLU A 132 ? ARG A 261 GLU A 272 1 ? 12 HELX_P HELX_P6 6 LEU A 142 ? GLY A 148 ? LEU A 282 GLY A 288 1 ? 7 HELX_P HELX_P7 7 THR A 152 ? ALA A 163 ? THR A 292 ALA A 303 1 ? 12 HELX_P HELX_P8 8 ASP A 176 ? THR A 182 ? ASP A 316 THR A 322 5 ? 7 HELX_P HELX_P9 9 ILE A 183 ? ALA A 193 ? ILE A 323 ALA A 333 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? C HOH . O ? ? ? 1_555 B MG . MG ? ? A HOH 5 A MG 101 1_555 ? ? ? ? ? ? ? 2.449 ? ? metalc2 metalc ? ? C HOH . O ? ? ? 1_555 B MG . MG ? ? A HOH 47 A MG 101 1_555 ? ? ? ? ? ? ? 2.601 ? ? metalc3 metalc ? ? C HOH . O ? ? ? 1_555 B MG . MG ? ? A HOH 48 A MG 101 1_555 ? ? ? ? ? ? ? 2.542 ? ? metalc4 metalc ? ? B MG . MG ? ? ? 1_555 A SER 12 OG ? ? A MG 101 A SER 152 1_555 ? ? ? ? ? ? ? 2.815 ? ? metalc5 metalc ? ? B MG . MG ? ? ? 1_555 A SER 14 OG ? ? A MG 101 A SER 154 1_555 ? ? ? ? ? ? ? 2.408 ? ? metalc6 metalc ? ? B MG . MG ? ? ? 1_555 A ASP 113 OD1 ? ? A MG 101 A ASP 253 1_555 ? ? ? ? ? ? ? 2.644 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? C HOH . ? A HOH 5 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? C HOH . ? A HOH 47 ? 1_555 96.5 ? 2 O ? C HOH . ? A HOH 5 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? C HOH . ? A HOH 48 ? 1_555 114.3 ? 3 O ? C HOH . ? A HOH 47 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? C HOH . ? A HOH 48 ? 1_555 86.0 ? 4 O ? C HOH . ? A HOH 5 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 OG ? A SER 12 ? A SER 152 ? 1_555 71.1 ? 5 O ? C HOH . ? A HOH 47 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 OG ? A SER 12 ? A SER 152 ? 1_555 160.9 ? 6 O ? C HOH . ? A HOH 48 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 OG ? A SER 12 ? A SER 152 ? 1_555 112.2 ? 7 O ? C HOH . ? A HOH 5 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 OG ? A SER 14 ? A SER 154 ? 1_555 146.3 ? 8 O ? C HOH . ? A HOH 47 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 OG ? A SER 14 ? A SER 154 ? 1_555 95.6 ? 9 O ? C HOH . ? A HOH 48 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 OG ? A SER 14 ? A SER 154 ? 1_555 97.9 ? 10 OG ? A SER 12 ? A SER 152 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 OG ? A SER 14 ? A SER 154 ? 1_555 88.0 ? 11 O ? C HOH . ? A HOH 5 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 OD1 ? A ASP 113 ? A ASP 253 ? 1_555 70.4 ? 12 O ? C HOH . ? A HOH 47 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 OD1 ? A ASP 113 ? A ASP 253 ? 1_555 90.9 ? 13 O ? C HOH . ? A HOH 48 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 OD1 ? A ASP 113 ? A ASP 253 ? 1_555 174.7 ? 14 OG ? A SER 12 ? A SER 152 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 OD1 ? A ASP 113 ? A ASP 253 ? 1_555 71.4 ? 15 OG ? A SER 14 ? A SER 154 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 OD1 ? A ASP 113 ? A ASP 253 ? 1_555 78.1 ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 16 A . ? TYR 156 A PRO 17 A ? PRO 157 A 1 -0.30 2 GLU 165 A . ? GLU 305 A PRO 166 A ? PRO 306 A 1 0.57 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 50 ? PHE A 54 ? VAL A 190 PHE A 194 A 2 GLN A 40 ? TYR A 46 ? GLN A 180 TYR A 186 A 3 LEU A 3 ? ASP A 10 ? LEU A 143 ASP A 150 A 4 LYS A 105 ? THR A 112 ? LYS A 245 THR A 252 A 5 ILE A 134 ? ILE A 141 ? ILE A 274 ILE A 281 A 6 PHE A 171 ? VAL A 174 ? PHE A 311 VAL A 314 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O PHE A 54 ? O PHE A 194 N ILE A 43 ? N ILE A 183 A 2 3 N GLN A 40 ? N GLN A 180 O LEU A 3 ? O LEU A 143 A 3 4 N ASP A 4 ? N ASP A 144 O LYS A 105 ? O LYS A 245 A 4 5 N MET A 108 ? N MET A 248 O GLN A 135 ? O GLN A 275 A 5 6 N ALA A 140 ? N ALA A 280 O PHE A 172 ? O PHE A 312 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id MG _struct_site.pdbx_auth_seq_id 101 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 6 _struct_site.details 'BINDING SITE FOR RESIDUE MG A 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 HOH C . ? HOH A 5 . ? 1_555 ? 2 AC1 6 HOH C . ? HOH A 47 . ? 1_555 ? 3 AC1 6 HOH C . ? HOH A 48 . ? 1_555 ? 4 AC1 6 SER A 12 ? SER A 152 . ? 1_555 ? 5 AC1 6 SER A 14 ? SER A 154 . ? 1_555 ? 6 AC1 6 ASP A 113 ? ASP A 253 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 178 ? ? -114.98 -133.95 2 1 MET A 221 ? ? -104.39 69.11 3 1 ASP A 258 ? ? -108.62 41.95 4 1 THR A 307 ? ? 121.15 -57.50 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 MG MG MG N N 250 PHE N N N N 251 PHE CA C N S 252 PHE C C N N 253 PHE O O N N 254 PHE CB C N N 255 PHE CG C Y N 256 PHE CD1 C Y N 257 PHE CD2 C Y N 258 PHE CE1 C Y N 259 PHE CE2 C Y N 260 PHE CZ C Y N 261 PHE OXT O N N 262 PHE H H N N 263 PHE H2 H N N 264 PHE HA H N N 265 PHE HB2 H N N 266 PHE HB3 H N N 267 PHE HD1 H N N 268 PHE HD2 H N N 269 PHE HE1 H N N 270 PHE HE2 H N N 271 PHE HZ H N N 272 PHE HXT H N N 273 PRO N N N N 274 PRO CA C N S 275 PRO C C N N 276 PRO O O N N 277 PRO CB C N N 278 PRO CG C N N 279 PRO CD C N N 280 PRO OXT O N N 281 PRO H H N N 282 PRO HA H N N 283 PRO HB2 H N N 284 PRO HB3 H N N 285 PRO HG2 H N N 286 PRO HG3 H N N 287 PRO HD2 H N N 288 PRO HD3 H N N 289 PRO HXT H N N 290 SER N N N N 291 SER CA C N S 292 SER C C N N 293 SER O O N N 294 SER CB C N N 295 SER OG O N N 296 SER OXT O N N 297 SER H H N N 298 SER H2 H N N 299 SER HA H N N 300 SER HB2 H N N 301 SER HB3 H N N 302 SER HG H N N 303 SER HXT H N N 304 THR N N N N 305 THR CA C N S 306 THR C C N N 307 THR O O N N 308 THR CB C N R 309 THR OG1 O N N 310 THR CG2 C N N 311 THR OXT O N N 312 THR H H N N 313 THR H2 H N N 314 THR HA H N N 315 THR HB H N N 316 THR HG1 H N N 317 THR HG21 H N N 318 THR HG22 H N N 319 THR HG23 H N N 320 THR HXT H N N 321 TRP N N N N 322 TRP CA C N S 323 TRP C C N N 324 TRP O O N N 325 TRP CB C N N 326 TRP CG C Y N 327 TRP CD1 C Y N 328 TRP CD2 C Y N 329 TRP NE1 N Y N 330 TRP CE2 C Y N 331 TRP CE3 C Y N 332 TRP CZ2 C Y N 333 TRP CZ3 C Y N 334 TRP CH2 C Y N 335 TRP OXT O N N 336 TRP H H N N 337 TRP H2 H N N 338 TRP HA H N N 339 TRP HB2 H N N 340 TRP HB3 H N N 341 TRP HD1 H N N 342 TRP HE1 H N N 343 TRP HE3 H N N 344 TRP HZ2 H N N 345 TRP HZ3 H N N 346 TRP HH2 H N N 347 TRP HXT H N N 348 TYR N N N N 349 TYR CA C N S 350 TYR C C N N 351 TYR O O N N 352 TYR CB C N N 353 TYR CG C Y N 354 TYR CD1 C Y N 355 TYR CD2 C Y N 356 TYR CE1 C Y N 357 TYR CE2 C Y N 358 TYR CZ C Y N 359 TYR OH O N N 360 TYR OXT O N N 361 TYR H H N N 362 TYR H2 H N N 363 TYR HA H N N 364 TYR HB2 H N N 365 TYR HB3 H N N 366 TYR HD1 H N N 367 TYR HD2 H N N 368 TYR HE1 H N N 369 TYR HE2 H N N 370 TYR HH H N N 371 TYR HXT H N N 372 VAL N N N N 373 VAL CA C N S 374 VAL C C N N 375 VAL O O N N 376 VAL CB C N N 377 VAL CG1 C N N 378 VAL CG2 C N N 379 VAL OXT O N N 380 VAL H H N N 381 VAL H2 H N N 382 VAL HA H N N 383 VAL HB H N N 384 VAL HG11 H N N 385 VAL HG12 H N N 386 VAL HG13 H N N 387 VAL HG21 H N N 388 VAL HG22 H N N 389 VAL HG23 H N N 390 VAL HXT H N N 391 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _atom_sites.entry_id 1QCY _atom_sites.fract_transf_matrix[1][1] 0.013431 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000184 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012216 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.026801 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O S # loop_