HEADER RIBOSOME 09-JUL-99 1QD7 TITLE PARTIAL MODEL FOR 30S RIBOSOMAL SUBUNIT COMPND MOL_ID: 1; COMPND 2 MOLECULE: CENTRAL FRAGMENT OF 16 S RNA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 563-912; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: END FRAGMENT OF 16 S RNA; COMPND 7 CHAIN: B; COMPND 8 FRAGMENT: RESIDUES 1400-1500; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: S4 RIBOSOMAL PROTEIN; COMPND 11 CHAIN: C; COMPND 12 MOL_ID: 4; COMPND 13 MOLECULE: S5 RIBOSOMAL PROTEIN; COMPND 14 CHAIN: D; COMPND 15 MOL_ID: 5; COMPND 16 MOLECULE: S6 RIBOSOMAL PROTEIN; COMPND 17 CHAIN: E; COMPND 18 MOL_ID: 6; COMPND 19 MOLECULE: S7 RIBOSOMAL PROTEIN; COMPND 20 CHAIN: F; COMPND 21 MOL_ID: 7; COMPND 22 MOLECULE: S8 RIBOSOMAL PROTEIN; COMPND 23 CHAIN: G; COMPND 24 MOL_ID: 8; COMPND 25 MOLECULE: S15 RIBOSOMAL PROTEIN; COMPND 26 CHAIN: H; COMPND 27 MOL_ID: 9; COMPND 28 MOLECULE: S17 RIBOSOMAL PROTEIN; COMPND 29 CHAIN: I; COMPND 30 MOL_ID: 10; COMPND 31 MOLECULE: S20 RIBOSOMAL PROTEIN; COMPND 32 CHAIN: J SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 274; SOURCE 4 MOL_ID: 2; SOURCE 5 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 6 ORGANISM_TAXID: 274; SOURCE 7 MOL_ID: 3; SOURCE 8 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 9 ORGANISM_TAXID: 274; SOURCE 10 MOL_ID: 4; SOURCE 11 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 12 ORGANISM_TAXID: 274; SOURCE 13 MOL_ID: 5; SOURCE 14 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 15 ORGANISM_TAXID: 274; SOURCE 16 MOL_ID: 6; SOURCE 17 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 18 ORGANISM_TAXID: 274; SOURCE 19 MOL_ID: 7; SOURCE 20 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 21 ORGANISM_TAXID: 274; SOURCE 22 MOL_ID: 8; SOURCE 23 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 24 ORGANISM_TAXID: 274; SOURCE 25 MOL_ID: 9; SOURCE 26 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 27 ORGANISM_TAXID: 274; SOURCE 28 MOL_ID: 10; SOURCE 29 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 30 ORGANISM_TAXID: 274 KEYWDS 30S RIBOSOMAL SUBUNIT, LOW RESOLUTION MODEL, RIBOSOME EXPDTA X-RAY DIFFRACTION MDLTYP CA ATOMS ONLY, CHAIN C, D, E, F, G, H, I, J; P ATOMS ONLY, CHAIN A, B AUTHOR W.M.CLEMONS JR.,J.L.C.MAY,B.T.WIMBERLY,J.P.MCCUTCHEON,M.S.CAPEL, AUTHOR 2 V.RAMAKRISHNAN REVDAT 6 16-AUG-23 1QD7 1 SEQADV SEQRES REVDAT 5 24-FEB-09 1QD7 1 VERSN REVDAT 4 01-APR-03 1QD7 1 JRNL REVDAT 3 17-JAN-01 1QD7 1 REMARK DBREF REVDAT 2 19-NOV-99 1QD7 1 SOURCE COMPND REMARK REVDAT 1 31-AUG-99 1QD7 0 JRNL AUTH W.M.CLEMONS JR.,J.L.MAY,B.T.WIMBERLY,J.P.MCCUTCHEON, JRNL AUTH 2 M.S.CAPEL,V.RAMAKRISHNAN JRNL TITL STRUCTURE OF A BACTERIAL 30S RIBOSOMAL SUBUNIT AT 5.5 A JRNL TITL 2 RESOLUTION. JRNL REF NATURE V. 400 833 1999 JRNL REFN ISSN 0028-0836 JRNL PMID 10476960 JRNL DOI 10.1038/23631 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH C.DAVIES,R.B.GERSTNER,D.E.DRAPER,V.RAMAKRISHNAN,S.W.WHITE REMARK 1 TITL THE CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN S4 REVEALS A REMARK 1 TITL 2 TWO-DOMAIN MOLECULE WITH AN EXTENSIVE RNA-BINDING SURFACE: REMARK 1 TITL 3 ONE DOMAIN SHOWS STRUCTURAL HOMOLOGY TO THE ETS DNA-BINDING REMARK 1 TITL 4 MOTIF REMARK 1 REF EMBO J. V. 17 4545 1998 REMARK 1 REFN ISSN 0261-4189 REMARK 1 DOI 10.1093/EMBOJ/17.16.4545 REMARK 1 REFERENCE 2 REMARK 1 AUTH V.RAMAKRISHNAN,S.W.WHITE REMARK 1 TITL THE STRUCTURE OF RIBOSOMAL PROTEIN S5 REVEALS SITES OF REMARK 1 TITL 2 INTERACTION WITH 16S RRNA REMARK 1 REF NATURE V. 358 768 1992 REMARK 1 REFN ISSN 0028-0836 REMARK 1 DOI 10.1038/358768A0 REMARK 1 REFERENCE 3 REMARK 1 AUTH M.LINDAHL,L.A.SVENSSON,A.LILJAS,I.A.SEDELNIKOVA, REMARK 1 AUTH 2 I.A.ELISEIKINA,N.P.FOMENKOVA,N.NEVSKAYA,S.V.NIKONOV, REMARK 1 AUTH 3 M.B.GARBER,T.A.MURANOVA,A.I.RYKONOVA,R.AMONS REMARK 1 TITL CRYSTAL STRUCTURE OF THE RIBOSOMAL PROTEIN S6 FROM THERMUS REMARK 1 TITL 2 THERMOPHILUS REMARK 1 REF EMBO J. V. 13 1249 1994 REMARK 1 REFN ISSN 0261-4189 REMARK 1 REFERENCE 4 REMARK 1 AUTH B.T.WIMBERLY,S.W.WHITE,V.RAMAKRISHNAN REMARK 1 TITL THE STRUCTURE OF RIBOSOMAL PROTEIN S7 AT 1.9 A RESOLUTION REMARK 1 TITL 2 REVEALS A BETA- HAIRPIN MOTIF THAT BINDS DOUBLE-STRANDED REMARK 1 TITL 3 NUCLEIC ACIDS REMARK 1 REF STRUCTURE V. 5 1187 1997 REMARK 1 REFN ISSN 0969-2126 REMARK 1 DOI 10.1016/S0969-2126(97)00269-4 REMARK 1 REFERENCE 5 REMARK 1 AUTH N.NEVSKAYA,S.TISCHENKO,A.NIKULIN,S.AL-KARADAGHI,A.LILJAS, REMARK 1 AUTH 2 B.EHRESMANN,C.EHRESMANN,M.GARBER,S.NIKONOV REMARK 1 TITL CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN S8 FROM THERMUS REMARK 1 TITL 2 THERMOPHILUS REVEALS A HIGH DEGREE OF STRUCTURAL REMARK 1 TITL 3 CONSERVATION OF A SPECIFIC RNA BINDING SITE REMARK 1 REF J.MOL.BIOL. V. 279 233 1998 REMARK 1 REFN ISSN 0022-2836 REMARK 1 DOI 10.1006/JMBI.1998.1758 REMARK 1 REFERENCE 6 REMARK 1 AUTH W.M.CLEMONS JR.,C.R.DAVIES,S.W.WHITE,V.RAMAKRISHNAN REMARK 1 TITL CONFORMATIONAL VARIABILITY OF THE N-TERMINAL HELIX IN THE REMARK 1 TITL 2 STRUCTURE OF RIBOSOMAL PROTEIN S15 REMARK 1 REF STRUCTURE V. 6 429 1998 REMARK 1 REFN ISSN 0969-2126 REMARK 1 REFERENCE 7 REMARK 1 AUTH T.N.JAISHREE,V.RAMAKRISHNAN,S.W.WHITE REMARK 1 TITL SOLUTION STRUCTURE OF PROKARYOTIC RIBOSOMAL PROTEIN S17 BY REMARK 1 TITL 2 HIGH-RESOLUTION NMR SPECTROSCOPY REMARK 1 REF BIOCHEMISTRY V. 35 2845 1996 REMARK 1 REFN ISSN 0006-2960 REMARK 1 DOI 10.1021/BI951062I REMARK 2 REMARK 2 RESOLUTION. 5.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : O REMARK 3 AUTHORS : JONES,ZOU,COWAN,KJELDGAARD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 5.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 42000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 946 REMARK 3 NUCLEIC ACID ATOMS : 359 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NO REFINEMENT WAS DONE EXCEPT FOR REMARK 3 VISUAL MAP FITTING. THIS MODEL WAS MADE FROM A 5.5 ANGSTROM X- REMARK 3 RAY MAP BY FITTING A-FORM RNA HELICES INTO REGIONS OF DOUBLE- REMARK 3 HELICAL DENSITY. NO ATTEMPT HAS BEEN MADE TO MAINTAIN PROPER REMARK 3 STEREOCHEMISTRY OR EVEN PHOSPHATE-PHOSPHATE DISTANCES. IN REMARK 3 PARTICULAR AT JUNCTIONS OF THE SHORT HELICES, THE CHAIN MAY BE REMARK 3 UNREALISTIC REMARK 4 REMARK 4 1QD7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JUL-99. REMARK 100 THE DEPOSITION ID IS D_1000009318. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-MAR-99 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 6 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X25 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000, 1.700 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRANDEIS - B4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42000 REMARK 200 RESOLUTION RANGE HIGH (A) : 5.500 REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.0 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 5.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 83.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: PROTEINS WERE FIT INTO MAP AS RIGID BODIES FROM REMARK 200 KNOWN CRYSTAL OR NMR STRUCTURES OF ISOLATED PROTEINS EXCEPT FOR REMARK 200 S20, FOR WHICH NO HIGH RESOLUTION STRUCTURE EXISTS. S20 WAS FIT REMARK 200 AS THREE-HELIX BUNDLE.S4 SEE REFERENCE (1); S5 MODELED ACCORDING REMARK 200 TO PDB CODE 1PKP;S6 MODELED ACCORDING TO PDB CODE 1RIS;S7 REMARK 200 MODELED ACCORDING TO PDB CODE 1RSS;S8 MODELED ACCORDING TO PDB REMARK 200 CODE 1AN7;S15 MODELED ACCORDING TO PDB CODE 1A23;S17 SEE REMARK 200 REFERENCE (7); REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: VAPOUR DIFFUSION AT 277 K, MPD, VAPOR REMARK 280 DIFFUSION REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 87.25000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 200.80000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 200.80000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 43.62500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 200.80000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 200.80000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 130.87500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 200.80000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 200.80000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 43.62500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 200.80000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 200.80000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 130.87500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 87.25000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DECAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H, I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CA UNK J 36 CA UNK J 37 1.26 REMARK 500 CA ARG I 85 CA ALA I 86 1.47 REMARK 500 CA UNK J 58 CA UNK J 59 1.49 REMARK 500 CA VAL H 16 CA HIS H 17 1.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1PKP RELATED DB: PDB REMARK 900 STRUCTURE OF RIBOSOMAL PROTEIN S5 REMARK 900 RELATED ID: 1RIS RELATED DB: PDB REMARK 900 STRUCTURE OF RIBOSOMAL PROTEIN S6 REMARK 900 RELATED ID: 1RSS RELATED DB: PDB REMARK 900 STRUCTURE OF RIBOSOMAL PROTEIN S7 REMARK 900 RELATED ID: 1A32 RELATED DB: PDB REMARK 900 STRUCTURE OF RIBOSOMAL PROTEIN S15 DBREF 1QD7 C 43 200 UNP P81288 RS4_BACST 41 198 DBREF 1QD7 D 4 148 UNP P02357 RS5_BACST 4 148 DBREF 1QD7 E 1 97 UNP P23370 RS6_THETH 1 97 DBREF 1QD7 F 12 146 UNP P17291 RS7_THETH 11 145 DBREF 1QD7 G 4 138 UNP P24319 RS8_THETH 3 137 DBREF 1QD7 H 2 86 UNP P05766 RS15_BACST 2 86 DBREF 1QD7 I 5 86 UNP P23828 RS17_BACST 5 86 DBREF 1QD7 A 563 911 PDB 1QD7 1QD7 563 911 DBREF 1QD7 B 1402 1489 PDB 1QD7 1QD7 1402 1489 DBREF 1QD7 J 1 100 PDB 1QD7 1QD7 1 100 SEQADV 1QD7 LEU C 120 UNP P81288 ILE 118 CONFLICT SEQADV 1QD7 ASP G 25 UNP P24319 GLU 24 CONFLICT SEQADV 1QD7 ARG G 37 UNP P24319 LYS 36 CONFLICT SEQADV 1QD7 ASP G 52 UNP P24319 GLU 51 CONFLICT SEQADV 1QD7 VAL G 61 UNP P24319 ILE 60 CONFLICT SEQADV 1QD7 TYR G 62 UNP P24319 HIS 61 CONFLICT SEQADV 1QD7 HIS G 81 UNP P24319 LYS 80 CONFLICT SEQADV 1QD7 LYS G 88 UNP P24319 ARG 87 CONFLICT SEQADV 1QD7 SER G 115 UNP P24319 PRO 114 CONFLICT SEQADV 1QD7 ARG I 85 UNP P23828 VAL 85 CONFLICT SEQADV 1QD7 ALA I 86 UNP P23828 LEU 86 CONFLICT SEQRES 1 A 271 N N N N N N N N N N N N N SEQRES 2 A 271 N N N N N N N N N N N N N SEQRES 3 A 271 N N N N N N N N N N N N N SEQRES 4 A 271 N N N N N N N N N N N N N SEQRES 5 A 271 N N N N N N N N N N N N N SEQRES 6 A 271 N N N N N N N N N N N N N SEQRES 7 A 271 N N N N N N N N N N N N N SEQRES 8 A 271 N N N N N N N N N N N N N SEQRES 9 A 271 N N N N N N N N N N N N N SEQRES 10 A 271 N N N N N N N N N N N N N SEQRES 11 A 271 N N N N N N N N N N N N N SEQRES 12 A 271 N N N N N N N N N N N N N SEQRES 13 A 271 N N N N N N N N N N N N N SEQRES 14 A 271 N N N N N N N N N N N N N SEQRES 15 A 271 N N N N N N N N N N N N N SEQRES 16 A 271 N N N N N N N N N N N N N SEQRES 17 A 271 N N N N N N N N N N N N N SEQRES 18 A 271 N N N N N N N N N N N N N SEQRES 19 A 271 N N N N N N N N N N N N N SEQRES 20 A 271 N N N N N N N N N N N N N SEQRES 21 A 271 N N N N N N N N N N N SEQRES 1 B 88 N N N N N N N N N N N N N SEQRES 2 B 88 N N N N N N N N N N N N N SEQRES 3 B 88 N N N N N N N N N N N N N SEQRES 4 B 88 N N N N N N N N N N N N N SEQRES 5 B 88 N N N N N N N N N N N N N SEQRES 6 B 88 N N N N N N N N N N N N N SEQRES 7 B 88 N N N N N N N N N N SEQRES 1 C 159 MET LYS LEU SER GLU TYR GLY LEU GLN LEU GLN GLU LYS SEQRES 2 C 159 GLN LYS LEU ARG HIS MET TYR GLY VAL ASN GLU ARG GLN SEQRES 3 C 159 PHE ARG LYS THR PHE GLU GLU ALA GLY LYS MET PRO GLY SEQRES 4 C 159 LYS HIS GLY GLU ASN PHE MET ILE LEU LEU GLU SER ARG SEQRES 5 C 159 LEU ASP ASN LEU VAL TYR ARG LEU GLY LEU ALA ARG THR SEQRES 6 C 159 ARG ARG GLN ALA ARG GLN LEU VAL THR HIS GLY HIS ILE SEQRES 7 C 159 LEU VAL ASP GLY SER ARG VAL ASN ILE PRO SER TYR ARG SEQRES 8 C 159 VAL LYS PRO GLY GLN THR ILE ALA VAL ARG GLU LYS SER SEQRES 9 C 159 ARG ASN LEU GLN VAL ILE LYS GLU ALA LEU GLU ALA ASN SEQRES 10 C 159 ASN TYR ILE PRO ASP TYR LEU SER PHE ASP PRO GLU LYS SEQRES 11 C 159 MET GLU GLY THR TYR THR ARG LEU PRO GLU ARG SER GLU SEQRES 12 C 159 LEU PRO ALA GLU ILE ASN GLU ALA LEU ILE VAL GLU PHE SEQRES 13 C 159 TYR SER ARG SEQRES 1 D 145 ILE ASN PRO ASN LYS LEU GLU LEU GLU GLU ARG VAL VAL SEQRES 2 D 145 ALA VAL ASN ARG VAL ALA LYS VAL VAL LYS GLY GLY ARG SEQRES 3 D 145 ARG LEU ARG PHE SER ALA LEU VAL VAL VAL GLY ASP LYS SEQRES 4 D 145 ASN GLY HIS VAL GLY PHE GLY THR GLY LYS ALA GLN GLU SEQRES 5 D 145 VAL PRO GLU ALA ILE ARG LYS ALA ILE GLU ASP ALA LYS SEQRES 6 D 145 LYS ASN LEU ILE GLU VAL PRO ILE VAL GLY THR THR ILE SEQRES 7 D 145 PRO HIS GLU VAL ILE GLY HIS PHE GLY ALA GLY GLU ILE SEQRES 8 D 145 ILE LEU LYS PRO ALA SER GLU GLY THR GLY VAL ILE ALA SEQRES 9 D 145 GLY GLY PRO ALA ARG ALA VAL LEU GLU LEU ALA GLY ILE SEQRES 10 D 145 SER ASP ILE LEU SER LYS SER ILE GLY SER ASN THR PRO SEQRES 11 D 145 ILE ASN MET VAL ARG ALA THR PHE ASP GLY LEU LYS GLN SEQRES 12 D 145 LEU LYS SEQRES 1 E 97 MET ARG ARG TYR GLU VAL ASN ILE VAL LEU ASN PRO ASN SEQRES 2 E 97 LEU ASP GLN SER GLN LEU ALA LEU GLU LYS GLU ILE ILE SEQRES 3 E 97 GLN ARG ALA LEU GLU ASN TYR GLY ALA ARG VAL GLU LYS SEQRES 4 E 97 VAL GLU GLU LEU GLY LEU ARG ARG LEU ALA TYR PRO ILE SEQRES 5 E 97 ALA LYS ASP PRO GLN GLY TYR PHE LEU TRP TYR GLN VAL SEQRES 6 E 97 GLU MET PRO GLU ASP ARG VAL ASN ASP LEU ALA ARG GLU SEQRES 7 E 97 LEU ARG ILE ARG ASP ASN VAL ARG ARG VAL MET VAL VAL SEQRES 8 E 97 LYS SER GLN GLU PRO PHE SEQRES 1 F 135 LEU GLN PRO ASP LEU VAL TYR GLY ASP VAL LEU VAL THR SEQRES 2 F 135 ALA PHE ILE ASN LYS ILE MET ARG ASP GLY LYS LYS ASN SEQRES 3 F 135 LEU ALA ALA ARG ILE PHE TYR ASP ALA CYS LYS ILE ILE SEQRES 4 F 135 GLN GLU LYS THR GLY GLN GLU PRO LEU LYS VAL PHE LYS SEQRES 5 F 135 GLN ALA VAL GLU ASN VAL LYS PRO ARG MET GLU VAL ARG SEQRES 6 F 135 SER ARG ARG VAL GLY GLY ALA ASN TYR GLN VAL PRO MET SEQRES 7 F 135 GLU VAL SER PRO ARG ARG GLN GLN SER LEU ALA LEU ARG SEQRES 8 F 135 TRP LEU VAL GLN ALA ALA ASN GLN ARG PRO GLU ARG ARG SEQRES 9 F 135 ALA ALA VAL ARG ILE ALA HIS GLU LEU MET ASP ALA ALA SEQRES 10 F 135 GLU GLY LYS GLY GLY ALA VAL LYS LYS LYS GLU ASP VAL SEQRES 11 F 135 GLU ARG MET ALA GLU SEQRES 1 G 136 THR ASP PRO ILE ALA ASP MET LEU THR ARG ILE ARG ASN SEQRES 2 G 136 ALA THR ARG VAL TYR LYS GLU SER THR ASP VAL PRO ALA SEQRES 3 G 136 SER ARG PHE LYS GLU GLU ILE LEU ARG ILE LEU ALA ARG SEQRES 4 G 136 GLU GLY PHE ILE LYS GLY TYR GLU ARG VAL ASP VAL ASP SEQRES 5 G 136 GLY LYS PRO TYR LEU ARG VAL TYR LEU LYS TYR GLY PRO SEQRES 6 G 136 ARG ARG GLN GLY PRO ASP PRO ARG PRO GLU GLN VAL ILE SEQRES 7 G 136 HIS HIS ILE ARG ARG ILE SER LYS PRO GLY ARG ARG VAL SEQRES 8 G 136 TYR VAL GLY VAL LYS GLU ILE PRO ARG VAL ARG ARG GLY SEQRES 9 G 136 LEU GLY ILE ALA ILE LEU SER THR SER LYS GLY VAL LEU SEQRES 10 G 136 THR ASP ARG GLU ALA ARG LYS LEU GLY VAL GLY GLY GLU SEQRES 11 G 136 LEU ILE CYS GLU VAL TRP SEQRES 1 H 85 LEU THR GLN GLU ARG LYS ARG GLU ILE ILE GLU GLN PHE SEQRES 2 H 85 LYS VAL HIS GLU ASN ASP THR GLY SER PRO GLU VAL GLN SEQRES 3 H 85 ILE ALA ILE LEU THR GLU GLN ILE ASN ASN LEU ASN GLU SEQRES 4 H 85 HIS LEU ARG VAL HIS LYS LYS ASP HIS HIS SER ARG ARG SEQRES 5 H 85 GLY LEU LEU LYS MET VAL GLY LYS ARG ARG ARG LEU LEU SEQRES 6 H 85 ALA TYR LEU ARG ASN LYS ASP VAL ALA ARG TYR ARG GLU SEQRES 7 H 85 ILE VAL GLU LYS LEU GLY LEU SEQRES 1 I 89 GLN ARG LYS VAL TYR VAL GLY ARG VAL VAL SER ASP LYS SEQRES 2 I 89 MET ASP LYS THR ILE THR VAL LEU VAL GLU THR TYR LYS SEQRES 3 I 89 LYS HIS PRO LEU TYR GLY LYS ARG VAL LYS TYR SER LYS SEQRES 4 I 89 LYS TYR LYS ALA HIS ASP GLU HIS ASN GLU ALA LYS VAL SEQRES 5 I 89 GLY ASP ILE VAL LYS ILE MET GLU THR ARG PRO LEU SER SEQRES 6 I 89 ALA THR LYS ARG PHE ARG LEU VAL GLU ILE VAL GLU LYS SEQRES 7 I 89 ALA VAL ARG ALA GLY ALA GLY ALA GLY ALA ALA SEQRES 1 J 100 UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK SEQRES 2 J 100 UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK SEQRES 3 J 100 UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK SEQRES 4 J 100 UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK SEQRES 5 J 100 UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK SEQRES 6 J 100 UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK SEQRES 7 J 100 UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK SEQRES 8 J 100 UNK UNK UNK UNK UNK UNK UNK UNK UNK CRYST1 401.600 401.600 174.500 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.002490 0.000000 0.000000 0.00000 SCALE2 0.000000 0.002490 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005731 0.00000