data_1QFA # _entry.id 1QFA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1QFA pdb_00001qfa 10.2210/pdb1qfa/pdb RCSB RCSB000813 ? ? WWPDB D_1000000813 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-04-08 2 'Structure model' 1 1 2008-04-26 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-03-14 5 'Structure model' 1 4 2023-12-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_struct_assembly 2 4 'Structure model' pdbx_struct_oper_list 3 4 'Structure model' struct_ref_seq_dif 4 5 'Structure model' chem_comp_atom 5 5 'Structure model' chem_comp_bond 6 5 'Structure model' database_2 7 5 'Structure model' struct_conn 8 5 'Structure model' struct_ref_seq_dif 9 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_struct_ref_seq_dif.details' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' 4 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 5 'Structure model' '_struct_ref_seq_dif.details' 6 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 7 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 8 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1QFA _pdbx_database_status.recvd_initial_deposition_date 1999-04-08 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Barnham, K.J.' 1 'Catalfamo, F.' 2 'Pallaghy, P.K.' 3 'Howlett, G.J.' 4 'Norton, R.S.' 5 # _citation.id primary _citation.title 'Helical structure and self-association in a 13 residue neuropeptide Y Y2 receptor agonist: relationship to biological activity.' _citation.journal_abbrev Biochim.Biophys.Acta _citation.journal_volume 1435 _citation.page_first 127 _citation.page_last 137 _citation.year 1999 _citation.journal_id_ASTM BBACAQ _citation.country NE _citation.journal_id_ISSN 0006-3002 _citation.journal_id_CSD 0113 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10561544 _citation.pdbx_database_id_DOI '10.1016/S0167-4838(99)00214-9' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Barnham, K.J.' 1 ? primary 'Catalfamo, F.' 2 ? primary 'Pallaghy, P.K.' 3 ? primary 'Howlett, G.J.' 4 ? primary 'Norton, R.S.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'PROTEIN (NEUROPEPTIDE Y)' _entity.formula_weight 1774.103 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation 'I28L, I31L' _entity.pdbx_fragment 'NPY Y2 RECEPTOR AGONIST' _entity.details 'PEPTIDE N-TERMINALLY ACETYLATED AND C-TERMINALLY AMIDATED.' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(ACE)LRHYLNLLTRQRY(NH2)' _entity_poly.pdbx_seq_one_letter_code_can XLRHYLNLLTRQRYX _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ACE n 1 2 LEU n 1 3 ARG n 1 4 HIS n 1 5 TYR n 1 6 LEU n 1 7 ASN n 1 8 LEU n 1 9 LEU n 1 10 THR n 1 11 ARG n 1 12 GLN n 1 13 ARG n 1 14 TYR n 1 15 NH2 n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'THIS PEPTIDE WAS CHEMICALLY SYNTHESIZED. THE SEQUENCE OF THIS PEPTIDE IS NATURALLY FOUND IN HOMO SAPIENS (HUMAN).' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ACE 1 23 23 ACE ACE A . n A 1 2 LEU 2 24 24 LEU LEU A . n A 1 3 ARG 3 25 25 ARG ARG A . n A 1 4 HIS 4 26 26 HIS HIS A . n A 1 5 TYR 5 27 27 TYR TYR A . n A 1 6 LEU 6 28 28 LEU LEU A . n A 1 7 ASN 7 29 29 ASN ASN A . n A 1 8 LEU 8 30 30 LEU LEU A . n A 1 9 LEU 9 31 31 LEU LEU A . n A 1 10 THR 10 32 32 THR THR A . n A 1 11 ARG 11 33 33 ARG ARG A . n A 1 12 GLN 12 34 34 GLN GLN A . n A 1 13 ARG 13 35 35 ARG ARG A . n A 1 14 TYR 14 36 36 TYR TYR A . n A 1 15 NH2 15 37 37 NH2 NH2 A . n # _cell.entry_id 1QFA _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1QFA _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _exptl.entry_id 1QFA _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _database_PDB_matrix.entry_id 1QFA _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1QFA _struct.title 'STRUCTURE OF A NEUROPEPTIDE Y Y2 AGONIST' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1QFA _struct_keywords.pdbx_keywords 'HORMONE/GROWTH FACTOR' _struct_keywords.text 'NEUROPEPTIDE Y, AGONIST, HELIX, HORMONE-GROWTH FACTOR COMPLEX' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NEUY_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P01303 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1QFA _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 14 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P01303 _struct_ref_seq.db_align_beg 52 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 64 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 24 _struct_ref_seq.pdbx_auth_seq_align_end 36 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1QFA LEU A 6 ? UNP P01303 ILE 56 'engineered mutation' 28 1 1 1QFA LEU A 9 ? UNP P01303 ILE 59 'engineered mutation' 31 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id ARG _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 3 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id GLN _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 12 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id ARG _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 25 _struct_conf.end_auth_comp_id GLN _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 34 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ACE 1 C ? ? ? 1_555 A LEU 2 N ? ? A ACE 23 A LEU 24 1_555 ? ? ? ? ? ? ? 1.309 ? ? covale2 covale both ? A TYR 14 C ? ? ? 1_555 A NH2 15 N ? ? A TYR 36 A NH2 37 1_555 ? ? ? ? ? ? ? 1.297 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ACE 23 ? 2 'BINDING SITE FOR RESIDUE ACE A 23' AC2 Software A NH2 37 ? 2 'BINDING SITE FOR RESIDUE NH2 A 37' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 ARG A 3 ? ARG A 25 . ? 1_555 ? 2 AC1 2 HIS A 4 ? HIS A 26 . ? 1_555 ? 3 AC2 2 ARG A 13 ? ARG A 35 . ? 1_555 ? 4 AC2 2 TYR A 14 ? TYR A 36 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 NE2 A HIS 26 ? ? CD2 A HIS 26 ? ? 1.306 1.373 -0.067 0.011 N 2 2 NE2 A HIS 26 ? ? CD2 A HIS 26 ? ? 1.304 1.373 -0.069 0.011 N 3 3 NE2 A HIS 26 ? ? CD2 A HIS 26 ? ? 1.306 1.373 -0.067 0.011 N 4 4 NE2 A HIS 26 ? ? CD2 A HIS 26 ? ? 1.306 1.373 -0.067 0.011 N 5 5 NE2 A HIS 26 ? ? CD2 A HIS 26 ? ? 1.305 1.373 -0.068 0.011 N 6 6 NE2 A HIS 26 ? ? CD2 A HIS 26 ? ? 1.305 1.373 -0.068 0.011 N 7 7 NE2 A HIS 26 ? ? CD2 A HIS 26 ? ? 1.306 1.373 -0.067 0.011 N 8 8 NE2 A HIS 26 ? ? CD2 A HIS 26 ? ? 1.305 1.373 -0.068 0.011 N 9 9 NE2 A HIS 26 ? ? CD2 A HIS 26 ? ? 1.306 1.373 -0.067 0.011 N 10 10 NE2 A HIS 26 ? ? CD2 A HIS 26 ? ? 1.306 1.373 -0.067 0.011 N 11 11 NE2 A HIS 26 ? ? CD2 A HIS 26 ? ? 1.305 1.373 -0.068 0.011 N 12 13 NE2 A HIS 26 ? ? CD2 A HIS 26 ? ? 1.306 1.373 -0.067 0.011 N 13 14 NE2 A HIS 26 ? ? CD2 A HIS 26 ? ? 1.307 1.373 -0.066 0.011 N 14 15 NE2 A HIS 26 ? ? CD2 A HIS 26 ? ? 1.307 1.373 -0.066 0.011 N 15 16 NE2 A HIS 26 ? ? CD2 A HIS 26 ? ? 1.305 1.373 -0.068 0.011 N 16 17 NE2 A HIS 26 ? ? CD2 A HIS 26 ? ? 1.305 1.373 -0.068 0.011 N 17 19 NE2 A HIS 26 ? ? CD2 A HIS 26 ? ? 1.306 1.373 -0.067 0.011 N 18 20 NE2 A HIS 26 ? ? CD2 A HIS 26 ? ? 1.305 1.373 -0.068 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 5 NE A ARG 33 ? ? CZ A ARG 33 ? ? NH2 A ARG 33 ? ? 116.92 120.30 -3.38 0.50 N 2 15 NE A ARG 33 ? ? CZ A ARG 33 ? ? NH2 A ARG 33 ? ? 117.28 120.30 -3.02 0.50 N 3 16 NE A ARG 35 ? ? CZ A ARG 35 ? ? NH2 A ARG 35 ? ? 117.14 120.30 -3.16 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 17 HIS A 26 ? ? -47.13 -19.87 2 19 HIS A 26 ? ? -49.02 -18.65 # _pdbx_nmr_ensemble.entry_id 1QFA _pdbx_nmr_ensemble.conformers_calculated_total_number 1000 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'LOWEST STEREOCHEMICAL AND NOE ENERGIES' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1QFA _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria ? # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '40% TFE-D3,60% WATER' _pdbx_nmr_sample_details.solvent_system ? # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 293 _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 3.6 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 NOESY 1 2 1 COSY 1 # _pdbx_nmr_refine.entry_id 1QFA _pdbx_nmr_refine.method 'distance geometry' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement X-PLOR 3.851 BRUNGER 1 'structure solution' DYANA ? ? 2 'structure solution' X-PLOR ? ? 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACE C C N N 1 ACE O O N N 2 ACE CH3 C N N 3 ACE H H N N 4 ACE H1 H N N 5 ACE H2 H N N 6 ACE H3 H N N 7 ARG N N N N 8 ARG CA C N S 9 ARG C C N N 10 ARG O O N N 11 ARG CB C N N 12 ARG CG C N N 13 ARG CD C N N 14 ARG NE N N N 15 ARG CZ C N N 16 ARG NH1 N N N 17 ARG NH2 N N N 18 ARG OXT O N N 19 ARG H H N N 20 ARG H2 H N N 21 ARG HA H N N 22 ARG HB2 H N N 23 ARG HB3 H N N 24 ARG HG2 H N N 25 ARG HG3 H N N 26 ARG HD2 H N N 27 ARG HD3 H N N 28 ARG HE H N N 29 ARG HH11 H N N 30 ARG HH12 H N N 31 ARG HH21 H N N 32 ARG HH22 H N N 33 ARG HXT H N N 34 ASN N N N N 35 ASN CA C N S 36 ASN C C N N 37 ASN O O N N 38 ASN CB C N N 39 ASN CG C N N 40 ASN OD1 O N N 41 ASN ND2 N N N 42 ASN OXT O N N 43 ASN H H N N 44 ASN H2 H N N 45 ASN HA H N N 46 ASN HB2 H N N 47 ASN HB3 H N N 48 ASN HD21 H N N 49 ASN HD22 H N N 50 ASN HXT H N N 51 GLN N N N N 52 GLN CA C N S 53 GLN C C N N 54 GLN O O N N 55 GLN CB C N N 56 GLN CG C N N 57 GLN CD C N N 58 GLN OE1 O N N 59 GLN NE2 N N N 60 GLN OXT O N N 61 GLN H H N N 62 GLN H2 H N N 63 GLN HA H N N 64 GLN HB2 H N N 65 GLN HB3 H N N 66 GLN HG2 H N N 67 GLN HG3 H N N 68 GLN HE21 H N N 69 GLN HE22 H N N 70 GLN HXT H N N 71 HIS N N N N 72 HIS CA C N S 73 HIS C C N N 74 HIS O O N N 75 HIS CB C N N 76 HIS CG C Y N 77 HIS ND1 N Y N 78 HIS CD2 C Y N 79 HIS CE1 C Y N 80 HIS NE2 N Y N 81 HIS OXT O N N 82 HIS H H N N 83 HIS H2 H N N 84 HIS HA H N N 85 HIS HB2 H N N 86 HIS HB3 H N N 87 HIS HD1 H N N 88 HIS HD2 H N N 89 HIS HE1 H N N 90 HIS HE2 H N N 91 HIS HXT H N N 92 ILE N N N N 93 ILE CA C N S 94 ILE C C N N 95 ILE O O N N 96 ILE CB C N S 97 ILE CG1 C N N 98 ILE CG2 C N N 99 ILE CD1 C N N 100 ILE OXT O N N 101 ILE H H N N 102 ILE H2 H N N 103 ILE HA H N N 104 ILE HB H N N 105 ILE HG12 H N N 106 ILE HG13 H N N 107 ILE HG21 H N N 108 ILE HG22 H N N 109 ILE HG23 H N N 110 ILE HD11 H N N 111 ILE HD12 H N N 112 ILE HD13 H N N 113 ILE HXT H N N 114 LEU N N N N 115 LEU CA C N S 116 LEU C C N N 117 LEU O O N N 118 LEU CB C N N 119 LEU CG C N N 120 LEU CD1 C N N 121 LEU CD2 C N N 122 LEU OXT O N N 123 LEU H H N N 124 LEU H2 H N N 125 LEU HA H N N 126 LEU HB2 H N N 127 LEU HB3 H N N 128 LEU HG H N N 129 LEU HD11 H N N 130 LEU HD12 H N N 131 LEU HD13 H N N 132 LEU HD21 H N N 133 LEU HD22 H N N 134 LEU HD23 H N N 135 LEU HXT H N N 136 NH2 N N N N 137 NH2 HN1 H N N 138 NH2 HN2 H N N 139 THR N N N N 140 THR CA C N S 141 THR C C N N 142 THR O O N N 143 THR CB C N R 144 THR OG1 O N N 145 THR CG2 C N N 146 THR OXT O N N 147 THR H H N N 148 THR H2 H N N 149 THR HA H N N 150 THR HB H N N 151 THR HG1 H N N 152 THR HG21 H N N 153 THR HG22 H N N 154 THR HG23 H N N 155 THR HXT H N N 156 TYR N N N N 157 TYR CA C N S 158 TYR C C N N 159 TYR O O N N 160 TYR CB C N N 161 TYR CG C Y N 162 TYR CD1 C Y N 163 TYR CD2 C Y N 164 TYR CE1 C Y N 165 TYR CE2 C Y N 166 TYR CZ C Y N 167 TYR OH O N N 168 TYR OXT O N N 169 TYR H H N N 170 TYR H2 H N N 171 TYR HA H N N 172 TYR HB2 H N N 173 TYR HB3 H N N 174 TYR HD1 H N N 175 TYR HD2 H N N 176 TYR HE1 H N N 177 TYR HE2 H N N 178 TYR HH H N N 179 TYR HXT H N N 180 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACE C O doub N N 1 ACE C CH3 sing N N 2 ACE C H sing N N 3 ACE CH3 H1 sing N N 4 ACE CH3 H2 sing N N 5 ACE CH3 H3 sing N N 6 ARG N CA sing N N 7 ARG N H sing N N 8 ARG N H2 sing N N 9 ARG CA C sing N N 10 ARG CA CB sing N N 11 ARG CA HA sing N N 12 ARG C O doub N N 13 ARG C OXT sing N N 14 ARG CB CG sing N N 15 ARG CB HB2 sing N N 16 ARG CB HB3 sing N N 17 ARG CG CD sing N N 18 ARG CG HG2 sing N N 19 ARG CG HG3 sing N N 20 ARG CD NE sing N N 21 ARG CD HD2 sing N N 22 ARG CD HD3 sing N N 23 ARG NE CZ sing N N 24 ARG NE HE sing N N 25 ARG CZ NH1 sing N N 26 ARG CZ NH2 doub N N 27 ARG NH1 HH11 sing N N 28 ARG NH1 HH12 sing N N 29 ARG NH2 HH21 sing N N 30 ARG NH2 HH22 sing N N 31 ARG OXT HXT sing N N 32 ASN N CA sing N N 33 ASN N H sing N N 34 ASN N H2 sing N N 35 ASN CA C sing N N 36 ASN CA CB sing N N 37 ASN CA HA sing N N 38 ASN C O doub N N 39 ASN C OXT sing N N 40 ASN CB CG sing N N 41 ASN CB HB2 sing N N 42 ASN CB HB3 sing N N 43 ASN CG OD1 doub N N 44 ASN CG ND2 sing N N 45 ASN ND2 HD21 sing N N 46 ASN ND2 HD22 sing N N 47 ASN OXT HXT sing N N 48 GLN N CA sing N N 49 GLN N H sing N N 50 GLN N H2 sing N N 51 GLN CA C sing N N 52 GLN CA CB sing N N 53 GLN CA HA sing N N 54 GLN C O doub N N 55 GLN C OXT sing N N 56 GLN CB CG sing N N 57 GLN CB HB2 sing N N 58 GLN CB HB3 sing N N 59 GLN CG CD sing N N 60 GLN CG HG2 sing N N 61 GLN CG HG3 sing N N 62 GLN CD OE1 doub N N 63 GLN CD NE2 sing N N 64 GLN NE2 HE21 sing N N 65 GLN NE2 HE22 sing N N 66 GLN OXT HXT sing N N 67 HIS N CA sing N N 68 HIS N H sing N N 69 HIS N H2 sing N N 70 HIS CA C sing N N 71 HIS CA CB sing N N 72 HIS CA HA sing N N 73 HIS C O doub N N 74 HIS C OXT sing N N 75 HIS CB CG sing N N 76 HIS CB HB2 sing N N 77 HIS CB HB3 sing N N 78 HIS CG ND1 sing Y N 79 HIS CG CD2 doub Y N 80 HIS ND1 CE1 doub Y N 81 HIS ND1 HD1 sing N N 82 HIS CD2 NE2 sing Y N 83 HIS CD2 HD2 sing N N 84 HIS CE1 NE2 sing Y N 85 HIS CE1 HE1 sing N N 86 HIS NE2 HE2 sing N N 87 HIS OXT HXT sing N N 88 ILE N CA sing N N 89 ILE N H sing N N 90 ILE N H2 sing N N 91 ILE CA C sing N N 92 ILE CA CB sing N N 93 ILE CA HA sing N N 94 ILE C O doub N N 95 ILE C OXT sing N N 96 ILE CB CG1 sing N N 97 ILE CB CG2 sing N N 98 ILE CB HB sing N N 99 ILE CG1 CD1 sing N N 100 ILE CG1 HG12 sing N N 101 ILE CG1 HG13 sing N N 102 ILE CG2 HG21 sing N N 103 ILE CG2 HG22 sing N N 104 ILE CG2 HG23 sing N N 105 ILE CD1 HD11 sing N N 106 ILE CD1 HD12 sing N N 107 ILE CD1 HD13 sing N N 108 ILE OXT HXT sing N N 109 LEU N CA sing N N 110 LEU N H sing N N 111 LEU N H2 sing N N 112 LEU CA C sing N N 113 LEU CA CB sing N N 114 LEU CA HA sing N N 115 LEU C O doub N N 116 LEU C OXT sing N N 117 LEU CB CG sing N N 118 LEU CB HB2 sing N N 119 LEU CB HB3 sing N N 120 LEU CG CD1 sing N N 121 LEU CG CD2 sing N N 122 LEU CG HG sing N N 123 LEU CD1 HD11 sing N N 124 LEU CD1 HD12 sing N N 125 LEU CD1 HD13 sing N N 126 LEU CD2 HD21 sing N N 127 LEU CD2 HD22 sing N N 128 LEU CD2 HD23 sing N N 129 LEU OXT HXT sing N N 130 NH2 N HN1 sing N N 131 NH2 N HN2 sing N N 132 THR N CA sing N N 133 THR N H sing N N 134 THR N H2 sing N N 135 THR CA C sing N N 136 THR CA CB sing N N 137 THR CA HA sing N N 138 THR C O doub N N 139 THR C OXT sing N N 140 THR CB OG1 sing N N 141 THR CB CG2 sing N N 142 THR CB HB sing N N 143 THR OG1 HG1 sing N N 144 THR CG2 HG21 sing N N 145 THR CG2 HG22 sing N N 146 THR CG2 HG23 sing N N 147 THR OXT HXT sing N N 148 TYR N CA sing N N 149 TYR N H sing N N 150 TYR N H2 sing N N 151 TYR CA C sing N N 152 TYR CA CB sing N N 153 TYR CA HA sing N N 154 TYR C O doub N N 155 TYR C OXT sing N N 156 TYR CB CG sing N N 157 TYR CB HB2 sing N N 158 TYR CB HB3 sing N N 159 TYR CG CD1 doub Y N 160 TYR CG CD2 sing Y N 161 TYR CD1 CE1 sing Y N 162 TYR CD1 HD1 sing N N 163 TYR CD2 CE2 doub Y N 164 TYR CD2 HD2 sing N N 165 TYR CE1 CZ doub Y N 166 TYR CE1 HE1 sing N N 167 TYR CE2 CZ sing Y N 168 TYR CE2 HE2 sing N N 169 TYR CZ OH sing N N 170 TYR OH HH sing N N 171 TYR OXT HXT sing N N 172 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model DRX600 _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.type ? # _atom_sites.entry_id 1QFA _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_