data_1QFQ # _entry.id 1QFQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1QFQ pdb_00001qfq 10.2210/pdb1qfq/pdb RCSB RCSB000841 ? ? WWPDB D_1000000841 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1999-04-20 2 'Structure model' 1 1 2007-10-21 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 5 'Structure model' 1 4 2023-12-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 5 'Structure model' chem_comp_atom 6 5 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1QFQ _pdbx_database_status.recvd_initial_deposition_date 1999-04-12 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Schaerpf, M.' 1 'Sticht, H.' 2 'Roesch, P.' 3 # _citation.id primary _citation.title 'Antitermination in bacteriophage lambda. The structure of the N36 peptide-boxB RNA complex' _citation.journal_abbrev Eur.J.Biochem. _citation.journal_volume 267 _citation.page_first 2397 _citation.page_last 2408 _citation.year 2000 _citation.journal_id_ASTM EJBCAI _citation.country IX _citation.journal_id_ISSN 0014-2956 _citation.journal_id_CSD 0262 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10759866 _citation.pdbx_database_id_DOI 10.1046/j.1432-1327.2000.01251.x # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Schaerpf, M.' 1 ? primary 'Sticht, H.' 2 ? primary 'Schweimer, K.' 3 ? primary 'Boehm, M.' 4 ? primary 'Hoffmann, S.' 5 ? primary 'Roesch, P.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn '15-mer nutRboxB RNA hairpin' 4853.994 1 ? ? 'BACTERIOPHAGE LAMBDA NUT boxB-RNA' 'NUTBOXB FROM THE NUTR-SEQUENCE' 2 polymer man '36-mer N-terminal peptide of the N protein' 4007.587 1 ? ? 'N-TERMINAL BINDING-DOMAIN, RESIDUES 2-36' ? # _entity_name_com.entity_id 2 _entity_name_com.name N36 # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no GCCCUGAAAAAGGGC GCCCUGAAAAAGGGC A ? 2 'polypeptide(L)' no no DAQTRRRERRAEKQAQWKAANPLLVGVSAKPVNRP DAQTRRRERRAEKQAQWKAANPLLVGVSAKPVNRP B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 C n 1 3 C n 1 4 C n 1 5 U n 1 6 G n 1 7 A n 1 8 A n 1 9 A n 1 10 A n 1 11 A n 1 12 G n 1 13 G n 1 14 G n 1 15 C n 2 1 ASP n 2 2 ALA n 2 3 GLN n 2 4 THR n 2 5 ARG n 2 6 ARG n 2 7 ARG n 2 8 GLU n 2 9 ARG n 2 10 ARG n 2 11 ALA n 2 12 GLU n 2 13 LYS n 2 14 GLN n 2 15 ALA n 2 16 GLN n 2 17 TRP n 2 18 LYS n 2 19 ALA n 2 20 ALA n 2 21 ASN n 2 22 PRO n 2 23 LEU n 2 24 LEU n 2 25 VAL n 2 26 GLY n 2 27 VAL n 2 28 SER n 2 29 ALA n 2 30 LYS n 2 31 PRO n 2 32 VAL n 2 33 ASN n 2 34 ARG n 2 35 PRO n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus 'Lambda-like viruses' _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Enterobacteria phage lambda' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10710 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'SEQUENCE FROM BACTERIOPHAGE LAMBDA. RNA WAS UNIFORMLY LABELLED WITH (13)C AND (15)N' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 C 2 2 2 C C A . n A 1 3 C 3 3 3 C C A . n A 1 4 C 4 4 4 C C A . n A 1 5 U 5 5 5 U U A . n A 1 6 G 6 6 6 G G A . n A 1 7 A 7 7 7 A A A . n A 1 8 A 8 8 8 A A A . n A 1 9 A 9 9 9 A A A . n A 1 10 A 10 10 10 A A A . n A 1 11 A 11 11 11 A A A . n A 1 12 G 12 12 12 G G A . n A 1 13 G 13 13 13 G G A . n A 1 14 G 14 14 14 G G A . n A 1 15 C 15 15 15 C C A . n B 2 1 ASP 1 2 2 ASP ASP B . n B 2 2 ALA 2 3 3 ALA ALA B . n B 2 3 GLN 3 4 4 GLN GLN B . n B 2 4 THR 4 5 5 THR THR B . n B 2 5 ARG 5 6 6 ARG ARG B . n B 2 6 ARG 6 7 7 ARG ARG B . n B 2 7 ARG 7 8 8 ARG ARG B . n B 2 8 GLU 8 9 9 GLU GLU B . n B 2 9 ARG 9 10 10 ARG ARG B . n B 2 10 ARG 10 11 11 ARG ARG B . n B 2 11 ALA 11 12 12 ALA ALA B . n B 2 12 GLU 12 13 13 GLU GLU B . n B 2 13 LYS 13 14 14 LYS LYS B . n B 2 14 GLN 14 15 15 GLN GLN B . n B 2 15 ALA 15 16 16 ALA ALA B . n B 2 16 GLN 16 17 17 GLN GLN B . n B 2 17 TRP 17 18 18 TRP TRP B . n B 2 18 LYS 18 19 19 LYS LYS B . n B 2 19 ALA 19 20 20 ALA ALA B . n B 2 20 ALA 20 21 21 ALA ALA B . n B 2 21 ASN 21 22 22 ASN ASN B . n B 2 22 PRO 22 23 23 PRO PRO B . n B 2 23 LEU 23 24 24 LEU LEU B . n B 2 24 LEU 24 25 25 LEU LEU B . n B 2 25 VAL 25 26 26 VAL VAL B . n B 2 26 GLY 26 27 27 GLY GLY B . n B 2 27 VAL 27 28 28 VAL VAL B . n B 2 28 SER 28 29 29 SER SER B . n B 2 29 ALA 29 30 30 ALA ALA B . n B 2 30 LYS 30 31 31 LYS LYS B . n B 2 31 PRO 31 32 32 PRO PRO B . n B 2 32 VAL 32 33 33 VAL VAL B . n B 2 33 ASN 33 34 34 ASN ASN B . n B 2 34 ARG 34 35 35 ARG ARG B . n B 2 35 PRO 35 36 36 PRO PRO B . n # _cell.entry_id 1QFQ _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1QFQ _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _exptl.entry_id 1QFQ _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _database_PDB_matrix.entry_id 1QFQ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1QFQ _struct.title 'Bacteriophage Lambda N-protein-NutboxB-RNA Complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1QFQ _struct_keywords.pdbx_keywords TRANSCRIPTION/RNA _struct_keywords.text ;BACTERIOPHAGE LAMBDA; ANTITERMINATION; PEPTIDE-RNA-COMPLEX; N-NUT; GNRA TETRALOOP; BENT-ALPHA-HELIX; PEPTIDE-RNA-RECOGNITION, TRANSCRIPTION-RNA COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code 1 UNP REGN_LAMBD P03045 2 2 ? ? 2 PDB 1QFQ 1QFQ 1 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1QFQ B 1 ? 35 ? P03045 2 ? 36 ? 2 36 2 2 1QFQ A 1 ? 15 ? 1QFQ 1 ? 15 ? 1 15 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id GLN _struct_conf.beg_label_asym_id B _struct_conf.beg_label_seq_id 3 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id ALA _struct_conf.end_label_asym_id B _struct_conf.end_label_seq_id 20 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id GLN _struct_conf.beg_auth_asym_id B _struct_conf.beg_auth_seq_id 4 _struct_conf.end_auth_comp_id ALA _struct_conf.end_auth_asym_id B _struct_conf.end_auth_seq_id 21 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 15 N3 ? ? A G 1 A C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 15 O2 ? ? A G 1 A C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 15 N4 ? ? A G 1 A C 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A C 2 N3 ? ? ? 1_555 A G 14 N1 ? ? A C 2 A G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A C 2 N4 ? ? ? 1_555 A G 14 O6 ? ? A C 2 A G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A C 2 O2 ? ? ? 1_555 A G 14 N2 ? ? A C 2 A G 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 13 N1 ? ? A C 3 A G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 13 O6 ? ? A C 3 A G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 13 N2 ? ? A C 3 A G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 12 N1 ? ? A C 4 A G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 12 O6 ? ? A C 4 A G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 12 N2 ? ? A C 4 A G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A U 5 N3 ? ? ? 1_555 A A 11 N1 ? ? A U 5 A A 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A U 5 O4 ? ? ? 1_555 A A 11 N6 ? ? A U 5 A A 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 6 N2 ? ? ? 1_555 A A 10 N7 ? ? A G 6 A A 10 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B GLN 15 ? ? H B LYS 19 ? ? 1.50 2 1 O B ARG 11 ? ? H B GLN 15 ? ? 1.51 3 2 O B GLN 15 ? ? H B LYS 19 ? ? 1.48 4 2 O B ARG 11 ? ? H B GLN 15 ? ? 1.51 5 3 O B GLN 15 ? ? H B LYS 19 ? ? 1.49 6 3 O B ARG 11 ? ? H B GLN 15 ? ? 1.50 7 4 O B GLN 15 ? ? H B LYS 19 ? ? 1.47 8 4 O B ARG 11 ? ? H B GLN 15 ? ? 1.52 9 5 O B GLN 15 ? ? H B LYS 19 ? ? 1.45 10 5 O B ARG 11 ? ? H B GLN 15 ? ? 1.52 11 6 O B GLN 15 ? ? H B LYS 19 ? ? 1.51 12 6 O B ARG 11 ? ? H B GLN 15 ? ? 1.52 13 7 O B GLN 15 ? ? H B LYS 19 ? ? 1.46 14 7 O B ARG 11 ? ? H B GLN 15 ? ? 1.52 15 8 O B GLN 15 ? ? H B LYS 19 ? ? 1.47 16 8 O B ARG 11 ? ? H B GLN 15 ? ? 1.52 17 9 "HO2'" A G 13 ? ? "O5'" A G 14 ? ? 1.46 18 9 O B GLN 15 ? ? H B LYS 19 ? ? 1.48 19 9 O B ARG 11 ? ? H B GLN 15 ? ? 1.51 20 10 O B GLN 15 ? ? H B LYS 19 ? ? 1.46 21 10 O B ARG 11 ? ? H B GLN 15 ? ? 1.53 22 11 O B GLN 15 ? ? H B LYS 19 ? ? 1.52 23 11 O B ARG 11 ? ? H B GLN 15 ? ? 1.53 24 12 O B VAL 26 ? ? H B VAL 28 ? ? 1.42 25 12 O B GLN 15 ? ? H B LYS 19 ? ? 1.47 26 12 O B ARG 11 ? ? H B GLN 15 ? ? 1.52 27 12 O B PRO 23 ? ? O B VAL 26 ? ? 2.03 28 12 O B VAL 26 ? ? N B VAL 28 ? ? 2.17 29 13 O B GLN 15 ? ? H B LYS 19 ? ? 1.50 30 13 O B ARG 11 ? ? H B GLN 15 ? ? 1.53 31 14 O B GLN 15 ? ? H B LYS 19 ? ? 1.46 32 14 O B ARG 11 ? ? H B GLN 15 ? ? 1.53 33 14 O B VAL 26 ? ? H B VAL 28 ? ? 1.59 34 15 H22 A G 6 ? ? H8 A A 10 ? ? 1.28 35 15 O B GLN 15 ? ? H B LYS 19 ? ? 1.50 36 15 O B ARG 11 ? ? H B GLN 15 ? ? 1.52 37 16 O B GLN 15 ? ? H B LYS 19 ? ? 1.49 38 16 O B ARG 11 ? ? H B GLN 15 ? ? 1.54 39 17 "HO2'" A G 13 ? ? "O5'" A G 14 ? ? 1.48 40 17 O B GLN 15 ? ? H B LYS 19 ? ? 1.50 41 17 O B ARG 11 ? ? H B GLN 15 ? ? 1.53 42 18 O B GLN 15 ? ? H B LYS 19 ? ? 1.48 43 18 O B ARG 11 ? ? H B GLN 15 ? ? 1.52 44 19 O B GLN 15 ? ? H B LYS 19 ? ? 1.47 45 19 O B ARG 11 ? ? H B GLN 15 ? ? 1.53 46 20 O B GLN 15 ? ? H B LYS 19 ? ? 1.47 47 20 O B ARG 11 ? ? H B GLN 15 ? ? 1.53 48 21 O B GLN 15 ? ? H B LYS 19 ? ? 1.51 49 21 "HO2'" A C 2 ? ? "O5'" A C 3 ? ? 1.53 50 21 O B ARG 11 ? ? H B GLN 15 ? ? 1.58 51 22 O B GLN 15 ? ? H B LYS 19 ? ? 1.49 52 22 O B ARG 11 ? ? H B GLN 15 ? ? 1.52 53 22 "HO2'" A C 3 ? ? "O5'" A C 4 ? ? 1.58 54 22 O B ALA 12 ? ? H B ALA 16 ? ? 1.60 55 23 O B GLN 15 ? ? H B LYS 19 ? ? 1.49 56 23 O B ARG 11 ? ? H B GLN 15 ? ? 1.51 57 24 O B GLN 15 ? ? H B LYS 19 ? ? 1.50 58 24 O B ARG 11 ? ? H B GLN 15 ? ? 1.53 59 25 O B GLN 15 ? ? H B LYS 19 ? ? 1.49 60 25 O B ARG 11 ? ? H B GLN 15 ? ? 1.53 61 26 O B GLN 15 ? ? H B LYS 19 ? ? 1.49 62 26 O B ARG 11 ? ? H B GLN 15 ? ? 1.52 63 27 O B GLN 15 ? ? H B LYS 19 ? ? 1.46 64 27 O B ARG 11 ? ? H B GLN 15 ? ? 1.52 65 28 O B GLN 15 ? ? H B LYS 19 ? ? 1.40 66 28 O B ARG 11 ? ? H B GLN 15 ? ? 1.55 67 29 O B GLN 15 ? ? H B LYS 19 ? ? 1.47 68 29 O B ARG 11 ? ? H B GLN 15 ? ? 1.51 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN B 22 ? ? -153.46 49.83 2 1 ARG B 35 ? ? -153.10 70.69 3 2 ASN B 22 ? ? -155.23 50.63 4 2 LEU B 25 ? ? -99.71 33.82 5 2 SER B 29 ? ? 52.01 -172.29 6 3 ALA B 3 ? ? -164.92 -41.38 7 3 ASN B 22 ? ? -154.37 51.58 8 3 ASN B 34 ? ? -113.65 54.60 9 4 ALA B 3 ? ? -148.33 -39.75 10 4 ASN B 22 ? ? -154.96 50.72 11 4 VAL B 28 ? ? -49.56 172.87 12 4 SER B 29 ? ? -55.44 79.79 13 4 ALA B 30 ? ? -175.40 42.00 14 4 ARG B 35 ? ? -152.44 54.63 15 5 ALA B 3 ? ? -161.70 -39.64 16 5 ASN B 22 ? ? -155.08 50.29 17 5 LEU B 25 ? ? -97.22 35.12 18 5 LYS B 31 ? ? -162.83 94.34 19 6 ALA B 3 ? ? -145.59 -39.54 20 6 ASN B 22 ? ? -154.28 51.91 21 6 LEU B 25 ? ? -99.39 31.73 22 6 SER B 29 ? ? 52.06 -167.84 23 6 ALA B 30 ? ? 51.44 78.31 24 6 ARG B 35 ? ? -51.08 108.45 25 7 ASN B 22 ? ? -155.40 52.42 26 7 VAL B 28 ? ? -49.88 170.35 27 7 SER B 29 ? ? -84.03 42.83 28 7 ALA B 30 ? ? 26.12 50.17 29 7 PRO B 32 ? ? -75.51 -168.32 30 8 ASN B 22 ? ? -155.35 52.40 31 8 VAL B 28 ? ? -49.68 171.19 32 8 SER B 29 ? ? -74.13 49.49 33 8 ALA B 30 ? ? 28.89 65.52 34 8 VAL B 33 ? ? -142.33 -93.24 35 9 ASN B 22 ? ? -154.10 52.40 36 9 VAL B 28 ? ? 50.93 171.51 37 9 ASN B 34 ? ? 55.71 178.63 38 9 ARG B 35 ? ? 47.82 -173.84 39 10 ASN B 22 ? ? -155.08 51.31 40 10 VAL B 28 ? ? 36.00 -154.25 41 10 SER B 29 ? ? -92.71 46.37 42 11 ALA B 3 ? ? -135.52 -40.00 43 11 ASN B 22 ? ? -155.14 50.00 44 11 SER B 29 ? ? 51.97 -161.36 45 11 LYS B 31 ? ? -159.04 77.08 46 11 ASN B 34 ? ? -67.41 80.42 47 12 ASN B 22 ? ? -156.23 52.76 48 12 LEU B 25 ? ? -96.93 35.22 49 12 VAL B 28 ? ? -35.83 157.36 50 12 ALA B 30 ? ? 12.91 69.39 51 12 ASN B 34 ? ? -101.04 56.16 52 13 ALA B 3 ? ? -153.74 -42.15 53 13 ASN B 22 ? ? -153.63 51.22 54 13 VAL B 28 ? ? -91.78 -157.57 55 13 ALA B 30 ? ? -152.75 48.42 56 13 VAL B 33 ? ? -107.28 67.49 57 13 ASN B 34 ? ? 50.32 71.27 58 13 ARG B 35 ? ? -179.53 -57.56 59 14 ASN B 22 ? ? -155.59 51.20 60 14 ALA B 30 ? ? -152.71 39.29 61 14 LYS B 31 ? ? -174.73 134.26 62 14 ARG B 35 ? ? 53.69 83.26 63 15 ASN B 22 ? ? -154.74 51.31 64 15 LEU B 25 ? ? -98.03 34.14 65 15 ALA B 30 ? ? 37.36 58.63 66 15 ASN B 34 ? ? -99.75 43.11 67 15 ARG B 35 ? ? 49.35 77.31 68 16 ASN B 22 ? ? -153.76 50.61 69 16 LEU B 25 ? ? -99.88 34.02 70 16 VAL B 28 ? ? 37.98 -157.63 71 16 SER B 29 ? ? -69.76 61.81 72 16 ALA B 30 ? ? -151.07 49.08 73 16 VAL B 33 ? ? 55.69 101.49 74 16 ARG B 35 ? ? -178.58 -58.31 75 17 ASN B 22 ? ? -152.87 49.68 76 17 LEU B 25 ? ? -99.16 35.75 77 17 VAL B 28 ? ? 54.97 135.13 78 17 SER B 29 ? ? 35.95 35.75 79 17 ALA B 30 ? ? 35.03 68.09 80 17 VAL B 33 ? ? -140.64 -39.16 81 17 ARG B 35 ? ? -171.04 96.60 82 18 ASN B 22 ? ? -155.02 51.86 83 18 SER B 29 ? ? 50.28 -170.79 84 18 ALA B 30 ? ? 51.04 74.08 85 19 ALA B 3 ? ? -140.81 -34.84 86 19 ASN B 22 ? ? -154.75 50.24 87 19 SER B 29 ? ? 52.35 -175.63 88 19 ASN B 34 ? ? -108.10 55.32 89 20 ALA B 3 ? ? -176.54 -33.95 90 20 ASN B 22 ? ? -155.36 50.93 91 20 LEU B 25 ? ? -99.58 30.70 92 20 SER B 29 ? ? 49.58 -170.03 93 20 ASN B 34 ? ? -147.92 53.85 94 21 ASN B 22 ? ? -153.58 50.36 95 21 LEU B 25 ? ? -98.53 33.61 96 21 VAL B 28 ? ? 50.90 -143.78 97 21 ALA B 30 ? ? 44.32 74.35 98 21 PRO B 32 ? ? -76.89 -167.89 99 21 VAL B 33 ? ? -98.60 -158.97 100 22 ASN B 22 ? ? -154.25 50.12 101 22 LEU B 25 ? ? -97.55 30.62 102 22 VAL B 28 ? ? 33.99 40.49 103 22 SER B 29 ? ? -141.00 -157.66 104 22 ARG B 35 ? ? -176.66 -58.37 105 23 ASN B 22 ? ? -154.55 50.86 106 23 LEU B 25 ? ? -98.35 34.33 107 23 VAL B 28 ? ? -39.19 142.54 108 23 ALA B 30 ? ? 28.93 89.13 109 23 VAL B 33 ? ? -173.44 -31.63 110 23 ASN B 34 ? ? -69.73 66.33 111 24 ASN B 22 ? ? -154.59 50.15 112 24 SER B 29 ? ? 47.88 -160.28 113 24 ALA B 30 ? ? -11.90 82.56 114 25 ASN B 22 ? ? -153.74 48.47 115 25 LEU B 25 ? ? -97.08 37.01 116 25 SER B 29 ? ? 54.82 -161.57 117 25 LYS B 31 ? ? -179.82 62.97 118 25 VAL B 33 ? ? -174.72 35.22 119 25 ASN B 34 ? ? -105.12 54.65 120 25 ARG B 35 ? ? -162.32 59.88 121 26 ALA B 3 ? ? -160.16 -40.98 122 26 ASN B 22 ? ? -155.16 52.91 123 26 ALA B 30 ? ? -141.04 44.63 124 27 ASN B 22 ? ? -155.67 52.66 125 27 LYS B 31 ? ? -167.32 60.35 126 27 VAL B 33 ? ? 58.30 124.44 127 27 ASN B 34 ? ? -53.18 103.37 128 27 ARG B 35 ? ? -172.01 -59.57 129 28 ASN B 22 ? ? -155.27 51.40 130 28 ALA B 30 ? ? -146.81 50.52 131 28 PRO B 32 ? ? -72.56 -165.87 132 29 ASN B 22 ? ? -153.69 47.86 133 29 VAL B 28 ? ? -51.54 174.66 134 29 ALA B 30 ? ? 29.15 58.63 # _pdbx_nmr_ensemble.entry_id 1QFQ _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 29 _pdbx_nmr_ensemble.conformer_selection_criteria 'LOWEST ENERGY, AGREEMENT WITH EXPERIMENTAL DATA' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1QFQ _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria ? # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '10% H2O/90% D2O' _pdbx_nmr_sample_details.solvent_system ? # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure 1.0 _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength '0 mM' _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '(1)H-(31)P-COSY' 2 1 1 '(1)H-(13)C-CT- HSQC' 3 1 1 '(1)H-(15)N-HSQC' 4 1 1 '(1)H-(1)H-COSY' 5 1 1 '(1)H-(1)H-TOCSY' 6 1 1 '(1)H-(1)H-NOESY WITH 75 AND 150 MS MIXING TIME' 7 1 1 "'(13)C-ED.-NOESY" 8 1 1 '(1)H-(15)N-(1)H-NOESY-HSQC' 9 1 1 '(1)H-(15)N-(1)H-TOCSY-HSQC' 10 1 1 HNHA 11 1 1 '(13)C-NOESY-HSQC' 12 1 1 HCCH-TOCSY 13 1 1 HCCH-COSY 14 1 1 CCH-COSY # _pdbx_nmr_refine.entry_id 1QFQ _pdbx_nmr_refine.method 'molecular dynamics' _pdbx_nmr_refine.details 'REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE.' _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement X-PLOR 3.851 BRUNGER 1 'structure solution' NDEE ? ? 2 'structure solution' Xndee ? ? 3 'structure solution' X-PLOR ? ? 4 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 G OP3 O N N 146 G P P N N 147 G OP1 O N N 148 G OP2 O N N 149 G "O5'" O N N 150 G "C5'" C N N 151 G "C4'" C N R 152 G "O4'" O N N 153 G "C3'" C N S 154 G "O3'" O N N 155 G "C2'" C N R 156 G "O2'" O N N 157 G "C1'" C N R 158 G N9 N Y N 159 G C8 C Y N 160 G N7 N Y N 161 G C5 C Y N 162 G C6 C N N 163 G O6 O N N 164 G N1 N N N 165 G C2 C N N 166 G N2 N N N 167 G N3 N N N 168 G C4 C Y N 169 G HOP3 H N N 170 G HOP2 H N N 171 G "H5'" H N N 172 G "H5''" H N N 173 G "H4'" H N N 174 G "H3'" H N N 175 G "HO3'" H N N 176 G "H2'" H N N 177 G "HO2'" H N N 178 G "H1'" H N N 179 G H8 H N N 180 G H1 H N N 181 G H21 H N N 182 G H22 H N N 183 GLN N N N N 184 GLN CA C N S 185 GLN C C N N 186 GLN O O N N 187 GLN CB C N N 188 GLN CG C N N 189 GLN CD C N N 190 GLN OE1 O N N 191 GLN NE2 N N N 192 GLN OXT O N N 193 GLN H H N N 194 GLN H2 H N N 195 GLN HA H N N 196 GLN HB2 H N N 197 GLN HB3 H N N 198 GLN HG2 H N N 199 GLN HG3 H N N 200 GLN HE21 H N N 201 GLN HE22 H N N 202 GLN HXT H N N 203 GLU N N N N 204 GLU CA C N S 205 GLU C C N N 206 GLU O O N N 207 GLU CB C N N 208 GLU CG C N N 209 GLU CD C N N 210 GLU OE1 O N N 211 GLU OE2 O N N 212 GLU OXT O N N 213 GLU H H N N 214 GLU H2 H N N 215 GLU HA H N N 216 GLU HB2 H N N 217 GLU HB3 H N N 218 GLU HG2 H N N 219 GLU HG3 H N N 220 GLU HE2 H N N 221 GLU HXT H N N 222 GLY N N N N 223 GLY CA C N N 224 GLY C C N N 225 GLY O O N N 226 GLY OXT O N N 227 GLY H H N N 228 GLY H2 H N N 229 GLY HA2 H N N 230 GLY HA3 H N N 231 GLY HXT H N N 232 LEU N N N N 233 LEU CA C N S 234 LEU C C N N 235 LEU O O N N 236 LEU CB C N N 237 LEU CG C N N 238 LEU CD1 C N N 239 LEU CD2 C N N 240 LEU OXT O N N 241 LEU H H N N 242 LEU H2 H N N 243 LEU HA H N N 244 LEU HB2 H N N 245 LEU HB3 H N N 246 LEU HG H N N 247 LEU HD11 H N N 248 LEU HD12 H N N 249 LEU HD13 H N N 250 LEU HD21 H N N 251 LEU HD22 H N N 252 LEU HD23 H N N 253 LEU HXT H N N 254 LYS N N N N 255 LYS CA C N S 256 LYS C C N N 257 LYS O O N N 258 LYS CB C N N 259 LYS CG C N N 260 LYS CD C N N 261 LYS CE C N N 262 LYS NZ N N N 263 LYS OXT O N N 264 LYS H H N N 265 LYS H2 H N N 266 LYS HA H N N 267 LYS HB2 H N N 268 LYS HB3 H N N 269 LYS HG2 H N N 270 LYS HG3 H N N 271 LYS HD2 H N N 272 LYS HD3 H N N 273 LYS HE2 H N N 274 LYS HE3 H N N 275 LYS HZ1 H N N 276 LYS HZ2 H N N 277 LYS HZ3 H N N 278 LYS HXT H N N 279 PRO N N N N 280 PRO CA C N S 281 PRO C C N N 282 PRO O O N N 283 PRO CB C N N 284 PRO CG C N N 285 PRO CD C N N 286 PRO OXT O N N 287 PRO H H N N 288 PRO HA H N N 289 PRO HB2 H N N 290 PRO HB3 H N N 291 PRO HG2 H N N 292 PRO HG3 H N N 293 PRO HD2 H N N 294 PRO HD3 H N N 295 PRO HXT H N N 296 SER N N N N 297 SER CA C N S 298 SER C C N N 299 SER O O N N 300 SER CB C N N 301 SER OG O N N 302 SER OXT O N N 303 SER H H N N 304 SER H2 H N N 305 SER HA H N N 306 SER HB2 H N N 307 SER HB3 H N N 308 SER HG H N N 309 SER HXT H N N 310 THR N N N N 311 THR CA C N S 312 THR C C N N 313 THR O O N N 314 THR CB C N R 315 THR OG1 O N N 316 THR CG2 C N N 317 THR OXT O N N 318 THR H H N N 319 THR H2 H N N 320 THR HA H N N 321 THR HB H N N 322 THR HG1 H N N 323 THR HG21 H N N 324 THR HG22 H N N 325 THR HG23 H N N 326 THR HXT H N N 327 TRP N N N N 328 TRP CA C N S 329 TRP C C N N 330 TRP O O N N 331 TRP CB C N N 332 TRP CG C Y N 333 TRP CD1 C Y N 334 TRP CD2 C Y N 335 TRP NE1 N Y N 336 TRP CE2 C Y N 337 TRP CE3 C Y N 338 TRP CZ2 C Y N 339 TRP CZ3 C Y N 340 TRP CH2 C Y N 341 TRP OXT O N N 342 TRP H H N N 343 TRP H2 H N N 344 TRP HA H N N 345 TRP HB2 H N N 346 TRP HB3 H N N 347 TRP HD1 H N N 348 TRP HE1 H N N 349 TRP HE3 H N N 350 TRP HZ2 H N N 351 TRP HZ3 H N N 352 TRP HH2 H N N 353 TRP HXT H N N 354 U OP3 O N N 355 U P P N N 356 U OP1 O N N 357 U OP2 O N N 358 U "O5'" O N N 359 U "C5'" C N N 360 U "C4'" C N R 361 U "O4'" O N N 362 U "C3'" C N S 363 U "O3'" O N N 364 U "C2'" C N R 365 U "O2'" O N N 366 U "C1'" C N R 367 U N1 N N N 368 U C2 C N N 369 U O2 O N N 370 U N3 N N N 371 U C4 C N N 372 U O4 O N N 373 U C5 C N N 374 U C6 C N N 375 U HOP3 H N N 376 U HOP2 H N N 377 U "H5'" H N N 378 U "H5''" H N N 379 U "H4'" H N N 380 U "H3'" H N N 381 U "HO3'" H N N 382 U "H2'" H N N 383 U "HO2'" H N N 384 U "H1'" H N N 385 U H3 H N N 386 U H5 H N N 387 U H6 H N N 388 VAL N N N N 389 VAL CA C N S 390 VAL C C N N 391 VAL O O N N 392 VAL CB C N N 393 VAL CG1 C N N 394 VAL CG2 C N N 395 VAL OXT O N N 396 VAL H H N N 397 VAL H2 H N N 398 VAL HA H N N 399 VAL HB H N N 400 VAL HG11 H N N 401 VAL HG12 H N N 402 VAL HG13 H N N 403 VAL HG21 H N N 404 VAL HG22 H N N 405 VAL HG23 H N N 406 VAL HXT H N N 407 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 G OP3 P sing N N 145 G OP3 HOP3 sing N N 146 G P OP1 doub N N 147 G P OP2 sing N N 148 G P "O5'" sing N N 149 G OP2 HOP2 sing N N 150 G "O5'" "C5'" sing N N 151 G "C5'" "C4'" sing N N 152 G "C5'" "H5'" sing N N 153 G "C5'" "H5''" sing N N 154 G "C4'" "O4'" sing N N 155 G "C4'" "C3'" sing N N 156 G "C4'" "H4'" sing N N 157 G "O4'" "C1'" sing N N 158 G "C3'" "O3'" sing N N 159 G "C3'" "C2'" sing N N 160 G "C3'" "H3'" sing N N 161 G "O3'" "HO3'" sing N N 162 G "C2'" "O2'" sing N N 163 G "C2'" "C1'" sing N N 164 G "C2'" "H2'" sing N N 165 G "O2'" "HO2'" sing N N 166 G "C1'" N9 sing N N 167 G "C1'" "H1'" sing N N 168 G N9 C8 sing Y N 169 G N9 C4 sing Y N 170 G C8 N7 doub Y N 171 G C8 H8 sing N N 172 G N7 C5 sing Y N 173 G C5 C6 sing N N 174 G C5 C4 doub Y N 175 G C6 O6 doub N N 176 G C6 N1 sing N N 177 G N1 C2 sing N N 178 G N1 H1 sing N N 179 G C2 N2 sing N N 180 G C2 N3 doub N N 181 G N2 H21 sing N N 182 G N2 H22 sing N N 183 G N3 C4 sing N N 184 GLN N CA sing N N 185 GLN N H sing N N 186 GLN N H2 sing N N 187 GLN CA C sing N N 188 GLN CA CB sing N N 189 GLN CA HA sing N N 190 GLN C O doub N N 191 GLN C OXT sing N N 192 GLN CB CG sing N N 193 GLN CB HB2 sing N N 194 GLN CB HB3 sing N N 195 GLN CG CD sing N N 196 GLN CG HG2 sing N N 197 GLN CG HG3 sing N N 198 GLN CD OE1 doub N N 199 GLN CD NE2 sing N N 200 GLN NE2 HE21 sing N N 201 GLN NE2 HE22 sing N N 202 GLN OXT HXT sing N N 203 GLU N CA sing N N 204 GLU N H sing N N 205 GLU N H2 sing N N 206 GLU CA C sing N N 207 GLU CA CB sing N N 208 GLU CA HA sing N N 209 GLU C O doub N N 210 GLU C OXT sing N N 211 GLU CB CG sing N N 212 GLU CB HB2 sing N N 213 GLU CB HB3 sing N N 214 GLU CG CD sing N N 215 GLU CG HG2 sing N N 216 GLU CG HG3 sing N N 217 GLU CD OE1 doub N N 218 GLU CD OE2 sing N N 219 GLU OE2 HE2 sing N N 220 GLU OXT HXT sing N N 221 GLY N CA sing N N 222 GLY N H sing N N 223 GLY N H2 sing N N 224 GLY CA C sing N N 225 GLY CA HA2 sing N N 226 GLY CA HA3 sing N N 227 GLY C O doub N N 228 GLY C OXT sing N N 229 GLY OXT HXT sing N N 230 LEU N CA sing N N 231 LEU N H sing N N 232 LEU N H2 sing N N 233 LEU CA C sing N N 234 LEU CA CB sing N N 235 LEU CA HA sing N N 236 LEU C O doub N N 237 LEU C OXT sing N N 238 LEU CB CG sing N N 239 LEU CB HB2 sing N N 240 LEU CB HB3 sing N N 241 LEU CG CD1 sing N N 242 LEU CG CD2 sing N N 243 LEU CG HG sing N N 244 LEU CD1 HD11 sing N N 245 LEU CD1 HD12 sing N N 246 LEU CD1 HD13 sing N N 247 LEU CD2 HD21 sing N N 248 LEU CD2 HD22 sing N N 249 LEU CD2 HD23 sing N N 250 LEU OXT HXT sing N N 251 LYS N CA sing N N 252 LYS N H sing N N 253 LYS N H2 sing N N 254 LYS CA C sing N N 255 LYS CA CB sing N N 256 LYS CA HA sing N N 257 LYS C O doub N N 258 LYS C OXT sing N N 259 LYS CB CG sing N N 260 LYS CB HB2 sing N N 261 LYS CB HB3 sing N N 262 LYS CG CD sing N N 263 LYS CG HG2 sing N N 264 LYS CG HG3 sing N N 265 LYS CD CE sing N N 266 LYS CD HD2 sing N N 267 LYS CD HD3 sing N N 268 LYS CE NZ sing N N 269 LYS CE HE2 sing N N 270 LYS CE HE3 sing N N 271 LYS NZ HZ1 sing N N 272 LYS NZ HZ2 sing N N 273 LYS NZ HZ3 sing N N 274 LYS OXT HXT sing N N 275 PRO N CA sing N N 276 PRO N CD sing N N 277 PRO N H sing N N 278 PRO CA C sing N N 279 PRO CA CB sing N N 280 PRO CA HA sing N N 281 PRO C O doub N N 282 PRO C OXT sing N N 283 PRO CB CG sing N N 284 PRO CB HB2 sing N N 285 PRO CB HB3 sing N N 286 PRO CG CD sing N N 287 PRO CG HG2 sing N N 288 PRO CG HG3 sing N N 289 PRO CD HD2 sing N N 290 PRO CD HD3 sing N N 291 PRO OXT HXT sing N N 292 SER N CA sing N N 293 SER N H sing N N 294 SER N H2 sing N N 295 SER CA C sing N N 296 SER CA CB sing N N 297 SER CA HA sing N N 298 SER C O doub N N 299 SER C OXT sing N N 300 SER CB OG sing N N 301 SER CB HB2 sing N N 302 SER CB HB3 sing N N 303 SER OG HG sing N N 304 SER OXT HXT sing N N 305 THR N CA sing N N 306 THR N H sing N N 307 THR N H2 sing N N 308 THR CA C sing N N 309 THR CA CB sing N N 310 THR CA HA sing N N 311 THR C O doub N N 312 THR C OXT sing N N 313 THR CB OG1 sing N N 314 THR CB CG2 sing N N 315 THR CB HB sing N N 316 THR OG1 HG1 sing N N 317 THR CG2 HG21 sing N N 318 THR CG2 HG22 sing N N 319 THR CG2 HG23 sing N N 320 THR OXT HXT sing N N 321 TRP N CA sing N N 322 TRP N H sing N N 323 TRP N H2 sing N N 324 TRP CA C sing N N 325 TRP CA CB sing N N 326 TRP CA HA sing N N 327 TRP C O doub N N 328 TRP C OXT sing N N 329 TRP CB CG sing N N 330 TRP CB HB2 sing N N 331 TRP CB HB3 sing N N 332 TRP CG CD1 doub Y N 333 TRP CG CD2 sing Y N 334 TRP CD1 NE1 sing Y N 335 TRP CD1 HD1 sing N N 336 TRP CD2 CE2 doub Y N 337 TRP CD2 CE3 sing Y N 338 TRP NE1 CE2 sing Y N 339 TRP NE1 HE1 sing N N 340 TRP CE2 CZ2 sing Y N 341 TRP CE3 CZ3 doub Y N 342 TRP CE3 HE3 sing N N 343 TRP CZ2 CH2 doub Y N 344 TRP CZ2 HZ2 sing N N 345 TRP CZ3 CH2 sing Y N 346 TRP CZ3 HZ3 sing N N 347 TRP CH2 HH2 sing N N 348 TRP OXT HXT sing N N 349 U OP3 P sing N N 350 U OP3 HOP3 sing N N 351 U P OP1 doub N N 352 U P OP2 sing N N 353 U P "O5'" sing N N 354 U OP2 HOP2 sing N N 355 U "O5'" "C5'" sing N N 356 U "C5'" "C4'" sing N N 357 U "C5'" "H5'" sing N N 358 U "C5'" "H5''" sing N N 359 U "C4'" "O4'" sing N N 360 U "C4'" "C3'" sing N N 361 U "C4'" "H4'" sing N N 362 U "O4'" "C1'" sing N N 363 U "C3'" "O3'" sing N N 364 U "C3'" "C2'" sing N N 365 U "C3'" "H3'" sing N N 366 U "O3'" "HO3'" sing N N 367 U "C2'" "O2'" sing N N 368 U "C2'" "C1'" sing N N 369 U "C2'" "H2'" sing N N 370 U "O2'" "HO2'" sing N N 371 U "C1'" N1 sing N N 372 U "C1'" "H1'" sing N N 373 U N1 C2 sing N N 374 U N1 C6 sing N N 375 U C2 O2 doub N N 376 U C2 N3 sing N N 377 U N3 C4 sing N N 378 U N3 H3 sing N N 379 U C4 O4 doub N N 380 U C4 C5 sing N N 381 U C5 C6 doub N N 382 U C5 H5 sing N N 383 U C6 H6 sing N N 384 VAL N CA sing N N 385 VAL N H sing N N 386 VAL N H2 sing N N 387 VAL CA C sing N N 388 VAL CA CB sing N N 389 VAL CA HA sing N N 390 VAL C O doub N N 391 VAL C OXT sing N N 392 VAL CB CG1 sing N N 393 VAL CB CG2 sing N N 394 VAL CB HB sing N N 395 VAL CG1 HG11 sing N N 396 VAL CG1 HG12 sing N N 397 VAL CG1 HG13 sing N N 398 VAL CG2 HG21 sing N N 399 VAL CG2 HG22 sing N N 400 VAL CG2 HG23 sing N N 401 VAL OXT HXT sing N N 402 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1QFQ 'a-form double helix' 1QFQ 'hairpin loop' 1QFQ 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 15 1_555 0.071 -0.103 -0.006 -0.023 0.085 -3.149 1 A_G1:C15_A A 1 ? A 15 ? 19 1 1 A C 2 1_555 A G 14 1_555 0.164 -0.095 -0.001 0.004 0.023 -1.159 2 A_C2:G14_A A 2 ? A 14 ? 19 1 1 A C 3 1_555 A G 13 1_555 0.132 -0.091 -0.005 0.035 -0.016 -1.488 3 A_C3:G13_A A 3 ? A 13 ? 19 1 1 A C 4 1_555 A G 12 1_555 0.098 -0.110 -0.004 -0.088 -0.046 -1.264 4 A_C4:G12_A A 4 ? A 12 ? 19 1 1 A U 5 1_555 A A 11 1_555 0.136 -0.134 -0.017 0.287 -0.042 1.751 5 A_U5:A11_A A 5 ? A 11 ? 20 1 1 A G 6 1_555 A A 10 1_555 6.017 -6.258 1.461 24.319 30.864 -24.152 6 A_G6:A10_A A 6 ? A 10 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 15 1_555 A C 2 1_555 A G 14 1_555 -0.029 -1.998 3.329 4.224 14.343 32.537 -5.117 0.595 2.257 24.077 -7.091 35.723 1 AA_G1C2:G14C15_AA A 1 ? A 15 ? A 2 ? A 14 ? 1 A C 2 1_555 A G 14 1_555 A C 3 1_555 A G 13 1_555 1.133 -1.596 3.550 0.717 -2.434 23.222 -3.017 -2.526 3.728 -6.024 -1.774 23.358 2 AA_C2C3:G13G14_AA A 2 ? A 14 ? A 3 ? A 13 ? 1 A C 3 1_555 A G 13 1_555 A C 4 1_555 A G 12 1_555 0.159 -1.681 3.064 -0.591 8.365 37.793 -3.445 -0.304 2.644 12.723 0.899 38.679 3 AA_C3C4:G12G13_AA A 3 ? A 13 ? A 4 ? A 12 ? 1 A C 4 1_555 A G 12 1_555 A U 5 1_555 A A 11 1_555 -0.866 -2.046 2.763 -0.858 9.273 18.320 -8.626 2.162 1.588 26.980 2.495 20.533 4 AA_C4U5:A11G12_AA A 4 ? A 12 ? A 5 ? A 11 ? 1 A U 5 1_555 A A 11 1_555 A G 6 1_555 A A 10 1_555 -1.865 -1.696 2.617 -8.413 8.786 62.248 -1.928 1.478 2.589 8.413 8.056 63.308 5 AA_U5G6:A10A11_AA A 5 ? A 11 ? A 6 ? A 10 ? # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.type 1 DRX Bruker 600 ? 2 DMX Bruker 750 ? # _atom_sites.entry_id 1QFQ _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_