HEADER LECTIN (AGGLUTININ) 30-APR-99 1QGL TITLE ROOM TEMPERATURE STRUCTURE OF CONCANAVALIN A COMPLEXED TO BIVALENT TITLE 2 LIGAND COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN (SUCCINYLATED CONCANAVALIN A ); COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CON A; COMPND 5 OTHER_DETAILS: COMPLEXED WITH BIVALENT LIGAND SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANAVALIA ENSIFORMIS; SOURCE 3 ORGANISM_COMMON: JACK BEAN; SOURCE 4 ORGANISM_TAXID: 3823 KEYWDS LECTIN (AGGLUTININ), CONCANAVLIN A, SACCHARIDE BINDING, RECOGNITION KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.H.NAISMITH REVDAT 5 16-AUG-23 1QGL 1 REMARK LINK REVDAT 4 07-MAR-18 1QGL 1 REMARK REVDAT 3 24-FEB-09 1QGL 1 VERSN REVDAT 2 29-MAR-05 1QGL 1 JRNL REVDAT 1 20-MAY-99 1QGL 0 JRNL AUTH S.M.DIMICK,S.C.POWELL,S.A.MCMAHON,D.N.MOOTHOO,J.H.NAISMITH, JRNL AUTH 2 E.J.TOONE JRNL TITL ON THE MEANING OF AFFINITY: CLUSTER GLYCOSIDE EFFECTS AND JRNL TITL 2 CONCANAVALIN A JRNL REF J.AM.CHEM.SOC. V. 121 10286 1999 JRNL REFN ISSN 0002-7863 REMARK 2 REMARK 2 RESOLUTION. 2.66 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 0.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.66 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 96.8 REMARK 3 NUMBER OF REFLECTIONS : 21164 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2143 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.66 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.83 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 84.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2770 REMARK 3 BIN R VALUE (WORKING SET) : 0.2240 REMARK 3 BIN FREE R VALUE : 0.2500 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.30 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 284 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.015 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3618 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 57 REMARK 3 SOLVENT ATOMS : 72 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -5.66000 REMARK 3 B22 (A**2) : 1.35000 REMARK 3 B33 (A**2) : 4.31000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.25 REMARK 3 ESD FROM SIGMAA (A) : 0.24 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.30 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.29 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.700 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.840 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.500 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.650 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.970 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.020 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : CNS DEFAULT REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : RESTRAINTS REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : CONA.PARAM REMARK 3 PARAMETER FILE 3 : CARBOHYDRATE.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : CARBOHYDRATE.TOP REMARK 3 TOPOLOGY FILE 3 : EJT.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED REMARK 4 REMARK 4 1QGL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-MAY-99. REMARK 100 THE DEPOSITION ID IS D_1000000978. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : ENRAF-NONIUS FR591 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NI REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : NONIUS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21164 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.660 REMARK 200 RESOLUTION RANGE LOW (A) : 26.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 200 DATA REDUNDANCY : 2.500 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : 0.07200 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 5CNA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 6 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.45000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 59.45000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 49.55000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 63.70000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 49.55000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 63.70000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 59.45000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 49.55000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 63.70000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 59.45000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 49.55000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 63.70000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 ASN A 118 REMARK 475 THR A 120 REMARK 475 ASN B 118 REMARK 475 SER B 119 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 36 CE NZ REMARK 480 LYS A 46 CD CE NZ REMARK 480 ASP A 71 CG OD1 OD2 REMARK 480 LYS A 116 CE NZ REMARK 480 SER A 119 OG REMARK 480 HIS A 121 CB CG ND1 CD2 CE1 NE2 REMARK 480 GLU A 122 CB CG CD OE1 OE2 REMARK 480 GLN A 132 CD OE1 NE2 REMARK 480 LYS A 135 CG CD CE NZ REMARK 480 THR A 150 CB OG1 CG2 REMARK 480 ASP A 151 CG OD1 OD2 REMARK 480 ASN A 162 CG OD1 ND2 REMARK 480 GLU A 192 CD OE1 OE2 REMARK 480 LYS A 200 CD CE NZ REMARK 480 SER A 204 CB OG REMARK 480 HIS A 205 CG ND1 CD2 CE1 NE2 REMARK 480 LYS B 30 CE NZ REMARK 480 LYS B 36 NZ REMARK 480 LYS B 46 CD CE NZ REMARK 480 SER B 117 OG REMARK 480 THR B 120 N CA CB OG1 CG2 REMARK 480 HIS B 121 CG ND1 CD2 CE1 NE2 REMARK 480 GLU B 122 CB CG CD OE1 OE2 REMARK 480 GLN B 132 CG CD OE1 NE2 REMARK 480 LYS B 135 CD CE NZ REMARK 480 ASP B 136 CG OD1 OD2 REMARK 480 THR B 150 CB OG1 CG2 REMARK 480 ASP B 151 CG OD1 OD2 REMARK 480 ARG B 158 NE CZ NH1 NH2 REMARK 480 SER B 204 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 21 47.01 -87.20 REMARK 500 LYS A 30 8.45 58.44 REMARK 500 ASN A 118 47.75 -76.62 REMARK 500 THR A 150 93.65 -63.95 REMARK 500 ASP A 203 -157.68 -107.09 REMARK 500 LEU A 230 19.05 54.33 REMARK 500 SER B 21 46.34 -88.75 REMARK 500 LYS B 30 7.37 60.00 REMARK 500 ASN B 118 34.80 -77.02 REMARK 500 THR B 120 105.88 -35.20 REMARK 500 THR B 150 93.83 -66.73 REMARK 500 ASP B 203 -154.34 -109.55 REMARK 500 LEU B 230 23.72 46.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 239 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 8 OE2 REMARK 620 2 ASP A 10 OD2 99.1 REMARK 620 3 ASP A 19 OD1 163.1 95.2 REMARK 620 4 HIS A 24 NE2 99.6 90.7 89.3 REMARK 620 5 HOH A 244 O 81.9 94.5 87.9 174.4 REMARK 620 6 HOH A 245 O 83.2 176.1 82.1 92.1 82.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 240 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 10 OD2 REMARK 620 2 ASP A 10 OD1 50.8 REMARK 620 3 TYR A 12 O 114.5 75.6 REMARK 620 4 ASN A 14 OD1 162.3 145.4 81.9 REMARK 620 5 ASP A 19 OD2 78.7 112.0 92.4 94.7 REMARK 620 6 HOH A 242 O 69.8 104.4 172.7 94.7 94.4 REMARK 620 7 HOH A 247 O 99.2 67.3 89.8 86.9 177.5 83.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 239 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 8 OE2 REMARK 620 2 ASP B 10 OD2 95.9 REMARK 620 3 ASP B 19 OD1 161.6 98.4 REMARK 620 4 HIS B 24 NE2 97.1 96.6 92.7 REMARK 620 5 HOH B 245 O 77.8 87.2 91.3 174.0 REMARK 620 6 HOH B 246 O 85.0 177.4 80.2 85.7 90.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 240 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 10 OD2 REMARK 620 2 ASP B 10 OD1 52.0 REMARK 620 3 TYR B 12 O 116.6 74.9 REMARK 620 4 ASN B 14 OD1 161.4 145.6 80.6 REMARK 620 5 ASP B 19 OD2 82.0 114.0 92.5 90.7 REMARK 620 6 HOH B 243 O 66.5 106.9 176.5 96.5 89.6 REMARK 620 7 HOH B 248 O 99.1 68.3 88.9 87.6 177.6 89.0 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 239 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 240 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 239 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 240 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SIN B 241 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EJT A 238 DBREF 1QGL A 1 237 UNP P81461 CONA_CANVI 1 237 DBREF 1QGL B 1 237 UNP P81461 CONA_CANVI 1 237 SEQRES 1 A 237 ALA ASP THR ILE VAL ALA VAL GLU LEU ASP THR TYR PRO SEQRES 2 A 237 ASN THR ASP ILE GLY ASP PRO SER TYR PRO HIS ILE GLY SEQRES 3 A 237 ILE ASP ILE LYS SER VAL ARG SER LYS LYS THR ALA LYS SEQRES 4 A 237 TRP ASN MET GLN ASN GLY LYS VAL GLY THR ALA HIS ILE SEQRES 5 A 237 ILE TYR ASN SER VAL ASP LYS ARG LEU SER ALA VAL VAL SEQRES 6 A 237 SER TYR PRO ASN ALA ASP SER ALA THR VAL SER TYR ASP SEQRES 7 A 237 VAL ASP LEU ASP ASN VAL LEU PRO GLU TRP VAL ARG VAL SEQRES 8 A 237 GLY LEU SER ALA SER THR GLY LEU TYR LYS GLU THR ASN SEQRES 9 A 237 THR ILE LEU SER TRP SER PHE THR SER LYS LEU LYS SER SEQRES 10 A 237 ASN SER THR HIS GLU THR ASN ALA LEU HIS PHE MET PHE SEQRES 11 A 237 ASN GLN PHE SER LYS ASP GLN LYS ASP LEU ILE LEU GLN SEQRES 12 A 237 GLY ASP ALA THR THR GLY THR ASP GLY ASN LEU GLU LEU SEQRES 13 A 237 THR ARG VAL SER SER ASN GLY SER PRO GLN GLY SER SER SEQRES 14 A 237 VAL GLY ARG ALA LEU PHE TYR ALA PRO VAL HIS ILE TRP SEQRES 15 A 237 GLU SER SER ALA VAL VAL ALA SER PHE GLU ALA THR PHE SEQRES 16 A 237 THR PHE LEU ILE LYS SER PRO ASP SER HIS PRO ALA ASP SEQRES 17 A 237 GLY ILE ALA PHE PHE ILE SER ASN ILE ASP SER SER ILE SEQRES 18 A 237 PRO SER GLY SER THR GLY ARG LEU LEU GLY LEU PHE PRO SEQRES 19 A 237 ASP ALA ASN SEQRES 1 B 237 ALA ASP THR ILE VAL ALA VAL GLU LEU ASP THR TYR PRO SEQRES 2 B 237 ASN THR ASP ILE GLY ASP PRO SER TYR PRO HIS ILE GLY SEQRES 3 B 237 ILE ASP ILE LYS SER VAL ARG SER LYS LYS THR ALA LYS SEQRES 4 B 237 TRP ASN MET GLN ASN GLY LYS VAL GLY THR ALA HIS ILE SEQRES 5 B 237 ILE TYR ASN SER VAL ASP LYS ARG LEU SER ALA VAL VAL SEQRES 6 B 237 SER TYR PRO ASN ALA ASP SER ALA THR VAL SER TYR ASP SEQRES 7 B 237 VAL ASP LEU ASP ASN VAL LEU PRO GLU TRP VAL ARG VAL SEQRES 8 B 237 GLY LEU SER ALA SER THR GLY LEU TYR LYS GLU THR ASN SEQRES 9 B 237 THR ILE LEU SER TRP SER PHE THR SER LYS LEU LYS SER SEQRES 10 B 237 ASN SER THR HIS GLU THR ASN ALA LEU HIS PHE MET PHE SEQRES 11 B 237 ASN GLN PHE SER LYS ASP GLN LYS ASP LEU ILE LEU GLN SEQRES 12 B 237 GLY ASP ALA THR THR GLY THR ASP GLY ASN LEU GLU LEU SEQRES 13 B 237 THR ARG VAL SER SER ASN GLY SER PRO GLN GLY SER SER SEQRES 14 B 237 VAL GLY ARG ALA LEU PHE TYR ALA PRO VAL HIS ILE TRP SEQRES 15 B 237 GLU SER SER ALA VAL VAL ALA SER PHE GLU ALA THR PHE SEQRES 16 B 237 THR PHE LEU ILE LYS SER PRO ASP SER HIS PRO ALA ASP SEQRES 17 B 237 GLY ILE ALA PHE PHE ILE SER ASN ILE ASP SER SER ILE SEQRES 18 B 237 PRO SER GLY SER THR GLY ARG LEU LEU GLY LEU PHE PRO SEQRES 19 B 237 ASP ALA ASN HET MN A 239 1 HET CA A 240 1 HET EJT A 238 46 HET MN B 239 1 HET CA B 240 1 HET SIN B 241 7 HETNAM MN MANGANESE (II) ION HETNAM CA CALCIUM ION HETNAM EJT 1,3-DI(N-PROPYLOXY-A-MANNOPYRANOSYL)-CARBOMYL 5- HETNAM 2 EJT METHYAZIDO-BENZENE HETNAM SIN SUCCINIC ACID FORMUL 3 MN 2(MN 2+) FORMUL 4 CA 2(CA 2+) FORMUL 5 EJT C27 H41 N5 O14 FORMUL 8 SIN C4 H6 O4 FORMUL 9 HOH *72(H2 O) HELIX 1 1 THR A 15 ILE A 17 5 3 HELIX 2 2 LEU A 81 ASN A 83 5 3 HELIX 3 3 THR A 150 GLY A 152 5 3 HELIX 4 4 GLY A 227 LEU A 229 5 3 HELIX 5 5 THR B 15 ILE B 17 5 3 HELIX 6 6 THR B 150 GLY B 152 5 3 HELIX 7 7 GLY B 227 LEU B 229 5 3 SHEET 1 A 7 LYS A 36 LYS A 39 0 SHEET 2 A 7 HIS A 24 ILE A 29 -1 N ILE A 27 O LYS A 36 SHEET 3 A 7 ILE A 4 ASP A 10 -1 N ASP A 10 O HIS A 24 SHEET 4 A 7 GLY A 209 SER A 215 -1 N ILE A 214 O VAL A 5 SHEET 5 A 7 ARG A 90 SER A 96 -1 N SER A 96 O GLY A 209 SHEET 6 A 7 VAL A 170 PHE A 175 -1 N ALA A 173 O LEU A 93 SHEET 7 A 7 LEU A 140 GLY A 144 -1 N GLN A 143 O ARG A 172 SHEET 1 B 6 ALA A 73 ASP A 78 0 SHEET 2 B 6 ARG A 60 TYR A 67 -1 N VAL A 65 O ALA A 73 SHEET 3 B 6 VAL A 47 ASN A 55 -1 N ASN A 55 O ARG A 60 SHEET 4 B 6 VAL A 188 LYS A 200 -1 N PHE A 197 O GLY A 48 SHEET 5 B 6 THR A 103 LYS A 116 -1 N LYS A 116 O VAL A 188 SHEET 6 B 6 THR A 123 PHE A 130 -1 N PHE A 130 O TRP A 109 SHEET 1 C 7 LYS B 36 LYS B 39 0 SHEET 2 C 7 HIS B 24 ILE B 29 -1 N ILE B 27 O LYS B 36 SHEET 3 C 7 ILE B 4 ASP B 10 -1 N ASP B 10 O HIS B 24 SHEET 4 C 7 GLY B 209 SER B 215 -1 N ILE B 214 O VAL B 5 SHEET 5 C 7 ARG B 90 THR B 97 -1 N SER B 96 O GLY B 209 SHEET 6 C 7 SER B 169 PHE B 175 -1 N ALA B 173 O LEU B 93 SHEET 7 C 7 LEU B 140 GLY B 144 -1 N GLN B 143 O ARG B 172 SHEET 1 D 6 ALA B 73 ASP B 78 0 SHEET 2 D 6 ARG B 60 TYR B 67 -1 N VAL B 65 O ALA B 73 SHEET 3 D 6 VAL B 47 ASN B 55 -1 N ASN B 55 O ARG B 60 SHEET 4 D 6 VAL B 188 LYS B 200 -1 N PHE B 197 O GLY B 48 SHEET 5 D 6 THR B 103 LYS B 116 -1 N LYS B 116 O VAL B 188 SHEET 6 D 6 THR B 123 PHE B 130 -1 N PHE B 130 O TRP B 109 LINK NZ LYS B 101 C1 SIN B 241 1555 1555 1.33 LINK OE2 GLU A 8 MN MN A 239 1555 1555 2.18 LINK OD2 ASP A 10 MN MN A 239 1555 1555 2.21 LINK OD2 ASP A 10 CA CA A 240 1555 1555 2.57 LINK OD1 ASP A 10 CA CA A 240 1555 1555 2.60 LINK O TYR A 12 CA CA A 240 1555 1555 2.26 LINK OD1 ASN A 14 CA CA A 240 1555 1555 2.24 LINK OD1 ASP A 19 MN MN A 239 1555 1555 2.24 LINK OD2 ASP A 19 CA CA A 240 1555 1555 2.28 LINK NE2 HIS A 24 MN MN A 239 1555 1555 2.23 LINK MN MN A 239 O HOH A 244 1555 1555 2.38 LINK MN MN A 239 O HOH A 245 1555 1555 2.17 LINK CA CA A 240 O HOH A 242 1555 1555 2.29 LINK CA CA A 240 O HOH A 247 1555 1555 2.09 LINK OE2 GLU B 8 MN MN B 239 1555 1555 2.21 LINK OD2 ASP B 10 MN MN B 239 1555 1555 2.28 LINK OD2 ASP B 10 CA CA B 240 1555 1555 2.48 LINK OD1 ASP B 10 CA CA B 240 1555 1555 2.56 LINK O TYR B 12 CA CA B 240 1555 1555 2.26 LINK OD1 ASN B 14 CA CA B 240 1555 1555 2.22 LINK OD1 ASP B 19 MN MN B 239 1555 1555 2.23 LINK OD2 ASP B 19 CA CA B 240 1555 1555 2.31 LINK NE2 HIS B 24 MN MN B 239 1555 1555 2.20 LINK MN MN B 239 O HOH B 245 1555 1555 2.18 LINK MN MN B 239 O HOH B 246 1555 1555 2.16 LINK CA CA B 240 O HOH B 243 1555 1555 2.42 LINK CA CA B 240 O HOH B 248 1555 1555 2.20 CISPEP 1 ALA A 207 ASP A 208 0 0.01 CISPEP 2 ALA B 207 ASP B 208 0 0.53 SITE 1 AC1 6 GLU A 8 ASP A 10 ASP A 19 HIS A 24 SITE 2 AC1 6 HOH A 244 HOH A 245 SITE 1 AC2 6 ASP A 10 TYR A 12 ASN A 14 ASP A 19 SITE 2 AC2 6 HOH A 242 HOH A 247 SITE 1 AC3 6 GLU B 8 ASP B 10 ASP B 19 HIS B 24 SITE 2 AC3 6 HOH B 245 HOH B 246 SITE 1 AC4 6 ASP B 10 TYR B 12 ASN B 14 ASP B 19 SITE 2 AC4 6 HOH B 243 HOH B 248 SITE 1 AC5 6 GLY A 167 SER A 168 LEU B 99 TYR B 100 SITE 2 AC5 6 LYS B 101 ASP B 203 SITE 1 AC6 19 TYR A 12 ASN A 14 THR A 15 ASP A 16 SITE 2 AC6 19 GLY A 98 LEU A 99 TYR A 100 ALA A 207 SITE 3 AC6 19 ASP A 208 GLY A 227 ARG A 228 TYR B 12 SITE 4 AC6 19 ASN B 14 GLY B 98 LEU B 99 TYR B 100 SITE 5 AC6 19 ALA B 207 ASP B 208 ARG B 228 CRYST1 99.100 127.400 118.900 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010091 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007849 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008410 0.00000 MTRIX1 1 -0.681450 -0.000340 0.731860 -31.51094 1 MTRIX2 1 0.002810 0.999990 0.003080 0.05166 1 MTRIX3 1 -0.731860 0.004160 -0.681440 126.65054 1