HEADER LYASE 21-JUN-99 1QJ4 TITLE HYDROXYNITRILE-LYASE FROM HEVEA BRASILIENSIS AT ATOMIC RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYDROXYNITRILE LYASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: OXYNITRILE LYASE; COMPND 5 EC: 4.1.2.39; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HEVEA BRASILIENSIS; SOURCE 3 ORGANISM_COMMON: PARA RUBBER TREE; SOURCE 4 ORGANISM_TAXID: 3981; SOURCE 5 ORGAN: LEAF; SOURCE 6 GENE: HNL; SOURCE 7 EXPRESSION_SYSTEM: PICHIA PASTORIS; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: BHIL-D2; SOURCE 10 EXPRESSION_SYSTEM_GENE: HNL KEYWDS OXYNITRILASE, CYANOGENESIS, CYANHYDRIN FORMATION, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR M.GUGGANIG,K.GRUBER,C.KRATKY REVDAT 7 13-DEC-23 1QJ4 1 REMARK REVDAT 6 24-JUL-19 1QJ4 1 REMARK REVDAT 5 22-MAY-19 1QJ4 1 REMARK REVDAT 4 24-FEB-09 1QJ4 1 VERSN REVDAT 3 22-JUN-04 1QJ4 1 COMPND REVDAT 2 10-APR-00 1QJ4 1 REMARK REVDAT 1 10-OCT-99 1QJ4 0 JRNL AUTH K.GRUBER,M.GUGGANIG,U.G.WAGNER,C.KRATKY JRNL TITL ATOMIC RESOLUTION CRYSTAL STRUCTURE OF HYDROXYNITRILE LYASE JRNL TITL 2 FROM HEVEA BRASILIENSIS JRNL REF BIOL.CHEM. V. 380 993 1999 JRNL REFN ISSN 1431-6730 JRNL PMID 10494852 JRNL DOI 10.1515/BC.1999.123 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.ZUEGG,K.GRUBER,M.GUGGANIG,U.G.WAGNER,C.KRATKY REMARK 1 TITL THREE-DIMENSIONAL STRUCTURES OF ENZYME-SUBSTRATE COMPLEXES REMARK 1 TITL 2 OF THE HYDROXYNITRILE LYASE FROM HEVEA BRASILIENSIS REMARK 1 REF PROTEIN SCI. V. 8 1990 2000 REMARK 1 REFN ISSN 0961-8368 REMARK 1 PMID 10548044 REMARK 1 REFERENCE 2 REMARK 1 AUTH U.G.WAGNER,M.HASSLACHER,H.GRIENGL,H.SCHWAB,C.KRATKY REMARK 1 TITL MECHANISM OF CYANOGENESIS: THE CRYSTAL STRUCTURE OF REMARK 1 TITL 2 HYDROXYNITRILE LYASE FROM HEVEA BRASILIENSIS REMARK 1 REF STRUCTURE V. 4 811 1996 REMARK 1 REFN ISSN 0969-2126 REMARK 1 PMID 8805565 REMARK 1 DOI 10.1016/S0969-2126(96)00088-3 REMARK 1 REFERENCE 3 REMARK 1 AUTH U.G.WAGNER,M.SCHALL,M.HAYN,M.HASSLACHER,H.SCHWAB, REMARK 1 AUTH 2 H.S.GRIENGL,C.KRATKY REMARK 1 TITL CRYSTALLIZATION OF A HYDROXYNITRILE LYASE REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 52 591 1996 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 15299689 REMARK 1 DOI 10.1107/S0907444995016830 REMARK 1 REFERENCE 4 REMARK 1 AUTH M.HASSLACHER,M.SCHALL,M.HAYN,H.GRIENGL,S.D.KOHLWEIN,H.SCHWAB REMARK 1 TITL MOLECULAR CLONING OF THE FULL-LENGTH CDNA OF REMARK 1 TITL 2 (S)-HYDROXYNITRILE LYASE FROM HEVEA BRASILIENSIS. FUNCTIONAL REMARK 1 TITL 3 EXPRESSION IN ESCHERICHIA COLI AND SACCHAROMYCES CEREVISIAE REMARK 1 TITL 4 AND IDENTIFICATION OF AN ACTIVE SITE RESIDUE REMARK 1 REF J.BIOL.CHEM. V. 271 5884 1996 REMARK 1 REFN ISSN 0021-9258 REMARK 1 PMID 8621461 REMARK 1 DOI 10.1074/JBC.271.10.5884 REMARK 2 REMARK 2 RESOLUTION. 1.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELXL-97 REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.1 REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : 0.116 REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.115 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.144 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 6192 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 123339 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : 0.108 REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : 0.108 REMARK 3 FREE R VALUE (F>4SIG(F)) : 0.135 REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : 5248 REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : 104710 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2056 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 26 REMARK 3 SOLVENT ATOMS : 550 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : 2629.7 REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : 2053.0 REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : 25 REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : 24572 REMARK 3 NUMBER OF RESTRAINTS : 43482 REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.014 REMARK 3 ANGLE DISTANCES (A) : 0.030 REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : 0.000 REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : 0.028 REMARK 3 ZERO CHIRAL VOLUMES (A**3) : 0.086 REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : 0.095 REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : 0.109 REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : 0.005 REMARK 3 SIMILAR ADP COMPONENTS (A**2) : 0.029 REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : 0.059 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: MOEWS & KRETSINGER, J.MOL.BIOL.91(1973)201-2 REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : ENGH AND HUBER REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: ANISOTROPIC REFINEMENT REDUCED FREE R REMARK 3 (NO CUTOFF) BY 0.043. RESIDUE SER-A80 IS OBSERVED IN A REMARK 3 RAMACHANDRAN 'FORBIDDEN' REGION. THIS CONFORMATION IS FOUND IN REMARK 3 ALL PREVIOUS HNL-STRUCTURES. STRUCTURES OF OTHER MEMBERS OF THE REMARK 3 ALPHA/BETA HYDROLASES FAMILY ALSO CONSISTENTLY SHOW THE REMARK 3 EQUIVALENT RESIDUE (NUCLEOPHILE) IN SUCH A CONFORMATION. REMARK 4 REMARK 4 1QJ4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-JUN-99. REMARK 100 THE DEPOSITION ID IS D_1290002844. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-AUG-98 REMARK 200 TEMPERATURE (KELVIN) : 120.0 REMARK 200 PH : 7.40 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : BW7B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8345 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 123339 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.1 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 20.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.36400 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: SHELXL-97 REMARK 200 STARTING MODEL: 7YAS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M NATRIUM HEPES BUFFER PH=7.4 2 % REMARK 280 PEG 400, 2.0 M AMMONIUM SULFATE, ROOM-TEMP., PH 7.40 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.08000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.08000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 23.64350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 53.32750 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 23.64350 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 53.32750 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 64.08000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 23.64350 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 53.32750 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 64.08000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 23.64350 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 53.32750 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 TOTAL BURIED SURFACE AREA: 1880 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.2 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 106.65500 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2138 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2142 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2230 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2398 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2462 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2468 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PRO A 163 CG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2218 O HOH A 2414 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 94 N - CA - CB ANGL. DEV. = -12.8 DEGREES REMARK 500 GLU A 111 CB - CG - CD ANGL. DEV. = 23.4 DEGREES REMARK 500 GLU A 111 OE1 - CD - OE2 ANGL. DEV. = -10.7 DEGREES REMARK 500 CYS A 113 CB - CA - C ANGL. DEV. = 8.3 DEGREES REMARK 500 ARG A 154 CD - NE - CZ ANGL. DEV. = 13.4 DEGREES REMARK 500 ARG A 154 NE - CZ - NH2 ANGL. DEV. = -4.4 DEGREES REMARK 500 GLU A 220 OE1 - CD - OE2 ANGL. DEV. = -12.8 DEGREES REMARK 500 GLU A 220 CG - CD - OE2 ANGL. DEV. = 14.7 DEGREES REMARK 500 TYR A 222 CB - CG - CD1 ANGL. DEV. = 3.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 80 -113.35 55.02 REMARK 500 LYS A 129 -120.25 60.37 REMARK 500 ILE A 209 -53.15 -124.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2011 DISTANCE = 6.65 ANGSTROMS REMARK 525 HOH A2013 DISTANCE = 6.15 ANGSTROMS REMARK 525 HOH A2014 DISTANCE = 6.22 ANGSTROMS REMARK 525 HOH A2017 DISTANCE = 6.34 ANGSTROMS REMARK 525 HOH A2021 DISTANCE = 6.45 ANGSTROMS REMARK 525 HOH A2026 DISTANCE = 6.81 ANGSTROMS REMARK 525 HOH A2039 DISTANCE = 6.28 ANGSTROMS REMARK 525 HOH A2062 DISTANCE = 6.08 ANGSTROMS REMARK 525 HOH A2066 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH A2067 DISTANCE = 7.25 ANGSTROMS REMARK 525 HOH A2072 DISTANCE = 7.27 ANGSTROMS REMARK 525 HOH A2082 DISTANCE = 6.10 ANGSTROMS REMARK 525 HOH A2096 DISTANCE = 6.68 ANGSTROMS REMARK 525 HOH A2116 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH A2285 DISTANCE = 6.31 ANGSTROMS REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: DSSP REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: DSSP REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 300 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1YAS RELATED DB: PDB DBREF 1QJ4 A 1 257 UNP P52704 HNL_HEVBR 1 257 SEQRES 1 A 257 MET ALA PHE ALA HIS PHE VAL LEU ILE HIS THR ILE CYS SEQRES 2 A 257 HIS GLY ALA TRP ILE TRP HIS LYS LEU LYS PRO LEU LEU SEQRES 3 A 257 GLU ALA LEU GLY HIS LYS VAL THR ALA LEU ASP LEU ALA SEQRES 4 A 257 ALA SER GLY VAL ASP PRO ARG GLN ILE GLU GLU ILE GLY SEQRES 5 A 257 SER PHE ASP GLU TYR SER GLU PRO LEU LEU THR PHE LEU SEQRES 6 A 257 GLU ALA LEU PRO PRO GLY GLU LYS VAL ILE LEU VAL GLY SEQRES 7 A 257 GLU SER CYS GLY GLY LEU ASN ILE ALA ILE ALA ALA ASP SEQRES 8 A 257 LYS TYR CYS GLU LYS ILE ALA ALA ALA VAL PHE HIS ASN SEQRES 9 A 257 SER VAL LEU PRO ASP THR GLU HIS CYS PRO SER TYR VAL SEQRES 10 A 257 VAL ASP LYS LEU MET GLU VAL PHE PRO ASP TRP LYS ASP SEQRES 11 A 257 THR THR TYR PHE THR TYR THR LYS ASP GLY LYS GLU ILE SEQRES 12 A 257 THR GLY LEU LYS LEU GLY PHE THR LEU LEU ARG GLU ASN SEQRES 13 A 257 LEU TYR THR LEU CYS GLY PRO GLU GLU TYR GLU LEU ALA SEQRES 14 A 257 LYS MET LEU THR ARG LYS GLY SER LEU PHE GLN ASN ILE SEQRES 15 A 257 LEU ALA LYS ARG PRO PHE PHE THR LYS GLU GLY TYR GLY SEQRES 16 A 257 SER ILE LYS LYS ILE TYR VAL TRP THR ASP GLN ASP GLU SEQRES 17 A 257 ILE PHE LEU PRO GLU PHE GLN LEU TRP GLN ILE GLU ASN SEQRES 18 A 257 TYR LYS PRO ASP LYS VAL TYR LYS VAL GLU GLY GLY ASP SEQRES 19 A 257 HIS LYS LEU GLN LEU THR LYS THR LYS GLU ILE ALA GLU SEQRES 20 A 257 ILE LEU GLN GLU VAL ALA ASP THR TYR ASN HET GOL A 300 12 HET SO4 A 400 5 HET SO4 A 401 5 HET SO4 A 402 5 HET SO4 A 403 5 HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL C3 H8 O3 FORMUL 3 SO4 4(O4 S 2-) FORMUL 7 HOH *550(H2 O) HELIX 1 1 GLY A 15 HIS A 20 5 6 HELIX 2 2 LYS A 21 LEU A 29 1 9 HELIX 3 3 GLN A 47 ILE A 51 5 5 HELIX 4 4 SER A 53 SER A 58 1 6 HELIX 5 5 SER A 58 ALA A 67 1 10 HELIX 6 6 CYS A 81 CYS A 94 1 14 HELIX 7 7 SER A 115 PHE A 125 1 11 HELIX 8 8 GLY A 149 LEU A 157 1 9 HELIX 9 9 GLY A 162 THR A 173 1 12 HELIX 10 10 PHE A 179 ARG A 186 1 8 HELIX 11 11 GLY A 193 ILE A 197 5 5 HELIX 12 12 LEU A 211 TYR A 222 1 12 HELIX 13 13 LYS A 236 LYS A 241 1 6 HELIX 14 14 LYS A 241 TYR A 256 1 16 SHEET 1 S1 6 ALA A 4 ILE A 9 0 SHEET 2 S1 6 LYS A 32 LEU A 36 1 SHEET 3 S1 6 SER A 53 LEU A 68 -1 SHEET 4 S1 6 LYS A 96 ASN A 104 -1 SHEET 5 S1 6 LYS A 198 TRP A 203 1 SHEET 6 S1 6 LYS A 226 VAL A 230 1 SHEET 1 S2 3 THR A 132 LYS A 138 0 SHEET 2 S2 3 LYS A 141 LYS A 147 -1 SHEET 3 S2 3 GLY A 176 LEU A 178 -1 SITE 1 AC1 7 LYS A 23 LYS A 170 HOH A2112 HOH A2535 SITE 2 AC1 7 HOH A2536 HOH A2537 HOH A2538 SITE 1 AC2 7 TYR A 116 TRP A 217 LYS A 229 HOH A2473 SITE 2 AC2 7 HOH A2539 HOH A2540 HOH A2541 SITE 1 AC3 11 THR A 137 LYS A 138 ASP A 139 GLY A 140 SITE 2 AC3 11 GLY A 232 GLY A 233 LYS A 241 HOH A2357 SITE 3 AC3 11 HOH A2543 HOH A2544 HOH A2547 SITE 1 AC4 6 LYS A 141 ASN A 181 LYS A 185 HOH A2369 SITE 2 AC4 6 HOH A2548 HOH A2549 SITE 1 AC5 9 THR A 11 ILE A 12 SER A 80 CYS A 81 SITE 2 AC5 9 TRP A 128 LEU A 148 PHE A 210 HIS A 235 SITE 3 AC5 9 HOH A2501 CRYST1 47.287 106.655 128.160 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021147 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009376 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007803 0.00000